nicotinic acetylcholine receptor subunit alpha1, maker-scaffold33_size549341-snap-gene-0.15 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Match: EMLSAG00000009437 (supercontig:LSalAtl2s:LSalAtl2s603:238594:257708:1 gene:EMLSAG00000009437 transcript:EMLSAT00000009437 description:"snap_masked-LSalAtl2s603-processed-gene-2.4") HSP 1 Score: 64.3142 bits (155), Expect = 1.223e-12 Identity = 27/66 (40.91%), Postives = 43/66 (65.15%), Query Frame = 0 Query: 127 AVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHIN--QKKGTNRIE 190 A++ ++G V W PP ++S+C +DV FFPFD+Q C +K GSW +DG+ + R Q++ +RI Sbjct: 43 ALVEHNGLVFWPPPTKFRSTCPVDVAFFPFDDQICMLKLGSWIHDGFSIPNRKWKDCQRQCIHRIR 108
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Match: EMLSAG00000003233 (supercontig:LSalAtl2s:LSalAtl2s178:159770:165601:1 gene:EMLSAG00000003233 transcript:EMLSAT00000003233 description:"augustus_masked-LSalAtl2s178-processed-gene-1.1") HSP 1 Score: 63.1586 bits (152), Expect = 2.206e-11 Identity = 49/186 (26.34%), Postives = 90/186 (48.39%), Query Frame = 0 Query: 1 MLVGLVASLLVYNLVGLEA-SPD-AKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKR-QIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQK 183 +++ V +L G+ A SP+ ++L +++L +YN RP + + V G+ + + +++ +V N+W + W+D +L W+ GV L +P+ IW PDIV + DG + + V +G V + P +K C + +C ++FGSWTYD +++L K Sbjct: 5 IVLCFVPCILYIPTFGVNAMSPNYVQKLTNEVLKDYNPAARPNDLNGNIGNVTFGISPTCL---NLRYYGLVFGNIWYKINWYDPRLTWNSSS--GVESLSLPNDLIWKPDIVPFFGRDGTHYDSKYPVKVFP-NGMVLFVPSVEFKHRCFRQTKRSARKIIRCNVEFGSWTYDSEIMNLNFFGGK 184
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Match: EMLSAG00000011250 (supercontig:LSalAtl2s:LSalAtl2s76:68800:74845:-1 gene:EMLSAG00000011250 transcript:EMLSAT00000011250 description:"maker-LSalAtl2s76-augustus-gene-0.8") HSP 1 Score: 62.003 bits (149), Expect = 9.661e-11 Identity = 56/233 (24.03%), Postives = 102/233 (43.78%), Query Frame = 0 Query: 48 LTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHV----PSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKS------SCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLI----LRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDS 266 L V + L ++ VD K+QI+ + W D ++ P R+ ++ W+PDI + D + V + T V S +V + Y S +C++D FP DEQ C +KF S+ G+ + + KKG++ I + L ++ ++ + + + N + P+ IF LI LRR+ ++ V IP + F++ L ++ +S Sbjct: 54 LLVNFSINLRNVLSVDEKQQIITLETSLRLYWEDPRIAVLPSALSESRNYVTFNPKVAEYFWIPDIFI----DKSKAVRVPTYFVKPASLRVYNDSTVRYSSRLNFDVACEMDFHRFPVDEQLCEIKFESF---GFTTEQLMFSWKKGSSNINQNISLAQFDMNKSLNCLYFTHIYNTSH------PFMSIFVGLIMKIHLRREIGYHIVQTYIPSMIFVFVAWLSLFISPES 273
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Match: EMLSAG00000009047 (supercontig:LSalAtl2s:LSalAtl2s566:676793:679625:-1 gene:EMLSAG00000009047 transcript:EMLSAT00000009047 description:"maker-LSalAtl2s566-snap-gene-5.58") HSP 1 Score: 61.2326 bits (147), Expect = 2.825e-10 Identity = 70/306 (22.88%), Postives = 129/306 (42.16%), Query Frame = 0 Query: 22 DAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGN-YEVTIMTKAV-LHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMV-DLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDS-GEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVL 323 + R +LL Y+ +RP D L V L ++ + +++ Q W D +L + EE + S+ IW+PD N+ + ++VT K V LH G +T+ +C +D+ ++P D Q C ++ S+ GY V D+ ++K +E L ++ I W+ NE+ Y + + L+R ++ +P + I LS + F++ ++ +V+L I+ +L++T I S+P + + LV C V V +L Sbjct: 79 NVTRTIGNLLDGYDIRLRP-NFGGDPLYVGFDLTIASFDSISEVSMDYTITMYLNQYWKDERLSFSTEEDKVLTLSGDFSEKIWVPDTFFANDKNSFLHDVTEQNKMVRLHGDGAITYGMRFTTTLACMMDLHYYPLDSQNCTVEIESY---GYTVSDVVMYWRQKPVVGVE-DAQLPQFTI-VGWET-------NERKIKLATGTYQRLSLSFKLQRNIGYFVFQTYLPSILIVMLSWVSFWINHEATSARVALGITTVLTMTT-------ISTGVRSSLPRISYVKAIDIYLVMCFVFVFAALL 364
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Match: EMLSAG00000000486 (supercontig:LSalAtl2s:LSalAtl2s1075:141499:142154:-1 gene:EMLSAG00000000486 transcript:EMLSAT00000000486 description:"snap_masked-LSalAtl2s1075-processed-gene-0.7") HSP 1 Score: 58.151 bits (139), Expect = 4.648e-10 Identity = 45/182 (24.73%), Postives = 82/182 (45.05%), Query Frame = 0 Query: 5 LVASLLVYNLVGLEASPDAKRLYDDLLSN---YNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMK--RQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIY------KSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMV 175 L+ SL++Y+++ ++ + DLL Y L + N R ++ L L ++ +D+ + + + W+D + KW+PE++ + + +P +W P+++L N + K + G V N IY S+C + E +PF Q C +KFGSW Y V Sbjct: 11 LLFSLIIYSILIPQSHERNFKSRHDLLKYLEIYQSLNDQMNNPIKRNKTEIDLSL-EVTSLDLNFGEGELKVDGLITLRWNDQRYKWNPEDFEDIDSIELPFSKVWSPEVILLN--------ARVEKFIHRQIGIVKSNGDIIYLLSMHSSSNCKPNFEKYPFGIQTCALKFGSWRNQHYKV 183
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|14286096|sp|P25162.3|ACH4_DROME (RecName: Full=Acetylcholine receptor subunit beta-like 2; AltName: Full=Nicotinic acetylcholine receptor beta 2; Flags: Precursor) HSP 1 Score: 567.77 bits (1462), Expect = 0.000e+0 Identity = 281/518 (54.25%), Postives = 377/518 (72.78%), Query Frame = 0 Query: 15 VGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPE-PEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYST--TFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKKNTIFTM 529 + EA+PD KRLYDDLLSNYNRLIRPV N+++ LTV LGLKLSQ+I V++K Q++ TN+WV+Q W DYKL+WDPEEYGGV L+VPS++IW+PDIVLYNN DGNYEVT+MTKA L Y+G+V W PPAIYKSSC+++VE+FP+DEQ CFMKFGSWTY+G VDL+H++Q G+N +++G+DL E+Y+S EWD+++ A +NE+YYP EP+ DI F L +RRK+LFYTVN+I+PCV ++FL+VLVFYLPSDSGEKV+L ISIL+SLTVFFLLLAEIIPPTS +VPLLGKYLLFTMILV+ SV T+ VLN++FR+P+TH M+P V+K F+ +PK + +RR + D DD T ++G TN ++ +S D+PSE S +D + + + + + P L P V +A+ A++F+AQH+K+ D +DWK+V+MVLDR LW FT++CV GT II +P+ +D+R PID S+I + F + Sbjct: 22 ISFEANPDTKRLYDDLLSNYNRLIRPVVNNTETLTVWLGLKLSQLIEVNLKNQVMTTNLWVKQRWFDYKLRWDPEEYGGVEQLYVPSEHIWVPDIVLYNNWDGNYEVTLMTKATLKYTGEVFWEPPAIYKSSCEMNVEYFPYDEQICFMKFGSWTYNGAQVDLKHLDQIPGSNLVQVGIDLTEFYLSVEWDILEVPATKNEEYYPDTLEPFSDITFKLTMRRKTLFYTVNLIVPCVALTFLTVLVFYLPSDSGEKVTLCISILVSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVSLSVWTTVCVLNIHFRSPSTHNMSPLVRKLFLHFMPKLMMMRRTQYTLPDYDD----------------------STPSNGYTNEIDVRDSIS---DFPSEFKDSQDGAYDNGMQNSVDSDNVI-----PRNLTPEVLQALRAVRFIAQHIKDADKDNEIVEDWKFVSMVLDRFFLWLFTLSCVFGTLAIICQSPSLYDTRSPIDRQLSEIPLRKNNFML 509
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|30581035|sp|P09478.2|ACH1_DROME (RecName: Full=Acetylcholine receptor subunit alpha-like 1; AltName: Full=Nicotinic acetylcholine receptor alpha 1; Flags: Precursor) HSP 1 Score: 567.77 bits (1462), Expect = 0.000e+0 Identity = 267/338 (78.99%), Postives = 305/338 (90.24%), Query Frame = 0 Query: 16 GLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFI 353 G A+PDAKRLYDDLLSNYNRLIRPVGN+SDRLTVK+GL+LSQ+I V++K QI+ TNVWVEQEW+DYKLKW+P++YGGV LHVPS++IWLPDIVLYNNADGNYEVTIMTKA+LH++GKV W PPAIYKS C+IDVE+FPFDEQ CFMKFGSWTYDGYMVDLRH+ Q ++ IE+G+DLQ+YYIS EWD+M AVRNEK+Y CCEEPY DI FNL LRRK+LFYTVN+IIPCVGISFLSVLVFYLPSDSGEK+SL ISILLSLTVFFLLLAEIIPPTS +VPLLGKYLLFTM+LVT SVVVTI VLNVNFR+P TH+MAPWV++ F+ +LPK L I Sbjct: 18 GGLANPDAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLKQTADSDNIEVGIDLQDYYISVEWDIMRVPAVRNEKFYSCCEEPYLDIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMAPWVQRLFIQILPKLLCI 355 HSP 2 Score: 107.071 bits (266), Expect = 2.211e-23 Identity = 45/79 (56.96%), Postives = 61/79 (77.22%), Query Frame = 0 Query: 446 VERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKKN 524 +E+ + +F+AQHVKN+D FE +DWKYVAMVLDR+ LW F +ACV+GT LII+ AP+ +D +PID++YSKI KK Sbjct: 477 MEKTIEGSRFIAQHVKNKDKFESVEEDWKYVAMVLDRMFLWIFAIACVVGTALIILQAPSLYDQSQPIDILYSKIAKKK 555
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|113054|sp|P17644.1|ACH2_DROME (RecName: Full=Acetylcholine receptor subunit alpha-like 2; AltName: Full=Nicotinic acetylcholine receptor alpha 2; Flags: Precursor) HSP 1 Score: 567 bits (1460), Expect = 0.000e+0 Identity = 281/534 (52.62%), Postives = 376/534 (70.41%), Query Frame = 0 Query: 17 LEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGT-NRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEP-----EEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEE-----PSTLNP----------------AVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKK 523 ++A+PDAKRLYDDLLSNYNRLIRPV N++D + VKLGL+LSQ+I +++K QI+ TNVW+E EW D+K KWDP EYGGV L+VPS++IWLPDIVLYNNADG Y VT MTKA+LHY+GKV W PPAI+KSSC+IDV +FPFD+Q CFMKFGSWTYDG +DL+HI+QK N++E+G+DL+EYY S EWD++ A R+EKYYPCC EPYPDIFFN+ LRRK+LFYTVN+IIPCVGIS+LSVLVFYLP+DSGEK++L ISILLS T+FFLL++EIIP TS ++PLLGKYLLFTM+LV SVV+TI +LN+++R P+THKM PW++ F+ LPK L +R P+ + + G+ + +K L+ ++ NSG ++ D+L G++ TT + S L+ PS L+ +E+A++ + F+ H++ +D F DW +VAMV+DR+ LW F +A ++GT +I+ AP+ +D K IDV S + K+ Sbjct: 39 VQANPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFKWDPSEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAILHYTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLKHISQKNDKDNKVEIGIDLREYYPSVEWDILGVPAERHEKYYPCCAEPYPDIFFNITLRRKTLFYTVNLIIPCVGISYLSVLVFYLPADSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMLLVGLSVVITIIILNIHYRKPSTHKMRPWIRSFFIKRLPKLLLMRVPKDLLRDLAANKINYGLKFSKTKFGQALMDEMQM-----NSGGSSPDSLRRMQGRVGAGGCNGMHVTTATNRFSGLVGALGGGLSTLSGYNGLPSVLSGLDDSLSDVAARKKYPFELEKAIHNVMFIQHHMQRQDEFNAEDQDWGFVAMVMDRLFLWLFMIASLVGTFVILGEAPSLYDDTKAIDVQLSDVAKQ 567
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|2492618|sp|P91766.1|ACH1_MANSE (RecName: Full=Acetylcholine receptor subunit alpha-like; AltName: Full=MARA1; Flags: Precursor) HSP 1 Score: 548.51 bits (1412), Expect = 0.000e+0 Identity = 285/506 (56.32%), Postives = 360/506 (71.15%), Query Frame = 0 Query: 16 GLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMYETSKSTSNLVSSKELPMITENS-GLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKI 520 G +PDAKRLYDDLLSNYN+L+RPV N SD LTV++ LKLSQ+I V++K QI+ TN+WVEQ W+DYKL W+P EYGGV LHVPS +IW PDIVLYNNADGN+EVT+ TKA L+Y+G+V W PPAIYKSSC+IDVE+FPFD+Q C MKFGSWTYDG+ VDLRHI++ +GTN +E+G+DL E+Y S EWD+++ AVRNEK+Y CC+EPY DI FN+ +RRK+LFYTVN+IIPC+GISFL+VLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTS VPLLGK++LFTMIL T S+ VT+ VLNV+FR+P TH M+PWV++ F+ VLP+ L +RRP D S+ + + E + E S G+ + + D +R L+ A++ + ++A + E+ +DWKYVAMVLDR LW FT+A V+G+ II+ APT +D R PIDV S+I Sbjct: 18 GCAGNPDAKRLYDDLLSNYNKLVRPVLNVSDALTVRIKLKLSQLIDVNLKNQIMTTNLWVEQSWYDYKLSWEPREYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWRPPAIYKSSCEIDVEYFPFDQQTCVMKFGSWTYDGFQVDLRHIDEVRGTNVVELGVDLSEFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNVHFRSPQTHTMSPWVRRVFIHVLPRLLVMRRPHYRLDP-------HRSRFAGLVTGAGETTLWDEGSPGVPAPPRPPP---------CAPPLAPCAACAPAEAPALCDALRRWHRCPELHKAID----GINYIADQTRKEEESTRVKEDWKYVAMVLDRPFLWIFTLAVVVGSAGIILQAPTLYDERAPIDVRLSEI 503
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|113050|sp|P23414.1|ACH1_SCHGR (RecName: Full=Acetylcholine receptor subunit alpha-L1; Flags: Precursor) HSP 1 Score: 521.161 bits (1341), Expect = 3.922e-180 Identity = 238/338 (70.41%), Postives = 292/338 (86.39%), Query Frame = 0 Query: 20 SPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPE 357 +PDAKRLYDDLLSNYNRLIRPV N++D + VKLGL+LSQ+I +++K QI+ TNVW+E EW D+K +WDP EYGGV L+VPS++IWLPDIVLYNNADG Y VT MTKAVLH++GKV W PPAI+KSSC+IDV +FPFD+Q CFMKFGSWTYDG +DL+HINQK N++++G+DL+EYY S EWD++ A R+EKYYPCC EPYPDIFFN+ LRRK+LFYTVN+I+PCVGIS+LSVLVFYLP+DSGEK++L ISILLS T+FFLL++EIIP TS ++PLLGKYLLFTM+LV SVV+TI VLNV++R P+THKMAPWV+K F+ LPK L +R PE Sbjct: 24 NPDAKRLYDDLLSNYNRLIRPVSNNTDTVLVKLGLRLSQLIDLNLKDQILTTNVWLEHEWQDHKFRWDPAEYGGVTELYVPSEHIWLPDIVLYNNADGEYVVTTMTKAVLHHTGKVVWTPPAIFKSSCEIDVRYFPFDQQTCFMKFGSWTYDGDQIDLKHINQKYDDNKVKVGIDLREYYPSVEWDILGVPAERHEKYYPCCAEPYPDIFFNITLRRKTLFYTVNLIVPCVGISYLSVLVFYLPADSGEKIALCISILLSQTMFFLLISEIIPSTSLALPLLGKYLLFTMVLVGLSVVITIMVLNVHYRKPSTHKMAPWVRKVFIRRLPKLLLMRVPE 361 HSP 2 Score: 75.0998 bits (183), Expect = 4.950e-13 Identity = 31/79 (39.24%), Postives = 52/79 (65.82%), Query Frame = 0 Query: 446 VERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKKN 524 +E+A++ + F+ H++ +D F+ DW +VAMVLDR+ LW FT+A ++GT I+ AP +D KPID+ S + ++ Sbjct: 472 LEKAIHNVLFIQNHMQRQDEFDAEDQDWGFVAMVLDRLFLWIFTIASIVGTFAILCEAPALYDDTKPIDMELSSVAQQQ 550
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|75023400|sp|Q9N587.2|ACH6_CAEEL (RecName: Full=Acetylcholine receptor subunit alpha-type unc-63; AltName: Full=Levamisole-resistant protein 7; AltName: Full=Uncoordinated protein 63; Flags: Precursor) HSP 1 Score: 469.929 bits (1208), Expect = 7.308e-161 Identity = 263/522 (50.38%), Postives = 344/522 (65.90%), Query Frame = 0 Query: 7 ASLLVYNLVG--LEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQK---------KGTNR--------IEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDS 509 A +L++ L+ A+ DA RL++DL+++YN+L+RPV + + L V LKLSQ++ V K QI+ TNVW++ W DYKL+WDP EYGGV L+VPS IWLPD+VLYNNADGNY+VTIMTKA L Y+G V W PPAIYKS C IDVEFFPFD Q+C MKFGSWTY G VDL+H ++ +G + ++ G+DL +YY S EWD+++ R+ K YPCCE P+ DI + + LRRK+LFYTVN+I P VGISFL+ LVFYLPSD GEK+SL ISIL+SLTVFFLLL EIIP TS +PL+GKYLLFTM+LVT SVVVT+ LNV++R+P TH M W+K+ FVD LPKYL + RP+P +++ ST + I N L N L LSP GL S E+ S +P RD N V A+ ++ ++A H+KNE++ + +DWKY+++V+DRI L TFT AC GT +II AP+ +D+ Sbjct: 9 AYILIFLLLSPPTHANRDANRLFEDLIADYNKLVRPVSENGETLVVTFKLKLSQLLDVHEKNQIMTTNVWLQHSWMDYKLRWDPVEYGGVEVLYVPSDTIWLPDVVLYNNADGNYQVTIMTKAKLTYNGTVEWAPPAIYKSMCQIDVEFFPFDRQQCEMKFGSWTYGGLEVDLQHRDKHLEKEIEEDVEGVDGPTKEIVWVVDRGIDLSDYYPSVEWDILNVPGKRHSKRYPCCESPFIDITYEIHLRRKTLFYTVNLIFPSVGISFLTALVFYLPSDGGEKISLCISILISLTVFFLLLVEIIPSTSLVIPLIGKYLLFTMVLVTLSVVVTVVTLNVHYRSPTTHTMPKWMKRLFVDFLPKYLLMTRPQPPGHHSKPNRKFDSRASTFS---------IGVNHVLGQNSEL---LSP-------GLNSNR--EESSFTLP-RD-----------NSPVRSAVESVAYIADHLKNEEDDKQVIEDWKYISVVMDRIFLITFTFACAFGTVVIIARAPSIYDN 497
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|2492621|sp|Q23022.1|ACH5_CAEEL (RecName: Full=Acetylcholine receptor subunit alpha-type unc-38; AltName: Full=Uncoordinated protein 38; Flags: Precursor) HSP 1 Score: 451.055 bits (1159), Expect = 2.454e-153 Identity = 249/515 (48.35%), Postives = 331/515 (64.27%), Query Frame = 0 Query: 18 EASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMV-------DLRH---INQKKGTNRI---EMGMDLQEYYISTEWDLMDTWAVRNEKYYPCC--EEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIY 517 E + DAKRLYDDL+ NYNR RP + + LT+KL L+LSQII V QI+ +VW++Q W D KL WDP YGGV L+VP + IW+PDIVLYNNAD NY +TI TKA LHY+G+VTW PPAI+KS C IDV +FPFDEQ+C +KFGSWT+ ++ LR+ I++K + + E G+DL +YY S EWD+M A R K YP C + Y D+ + L LRRK LFYTVN++ PCVGISFL++LVFYLPSDSGEKV+L ISIL++LT+FFLLL EIIP TS ++PL+GKYLLFTM++VT SVVVT+ LN++FRTP TH M WVKK F+ LPK LF+RRP +DD YE ++ + ++N N + + T D+ + +P V +A + F+A+ +K +D + +DWKYVAMVLDR+ L F++AC +GT +I++ APT +D+R+PID+ Y Sbjct: 22 EGNEDAKRLYDDLMVNYNRHRRPSTSPNKPLTIKLKLRLSQIIDVHEIDQIMTCSVWLKQTWIDRKLSWDPVNYGGVNVLYVPYEMIWVPDIVLYNNADSNYNITISTKATLHYTGEVTWEPPAIFKSMCQIDVRWFPFDEQQCHLKFGSWTFSENLLSVELNEPSLRYEEEIDEKGIIDNVTVAEDGIDLSDYYPSVEWDIMSRVAKRRAKNYPSCCPQSAYIDVTYYLQLRRKPLFYTVNLVFPCVGISFLTILVFYLPSDSGEKVTLCISILVALTIFFLLLTEIIPATSITLPLIGKYLLFTMVMVTLSVVVTVISLNLHFRTPTTHLMPNWVKKVFLKWLPKLLFMRRP-----IDD----YEEKFDDKKKPKDGKIALSVHAHRVSNVGN--------------NIRNATIDDTIQKMY--------------YSPPVVKAFENICFIAELLKKKDRDDKIDEDWKYVAMVLDRLFLLIFSIACFVGTVIILLRAPTLYDTRQPIDLQY 499
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|254763435|sp|P32297.4|ACHA3_HUMAN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 431.409 bits (1108), Expect = 8.762e-146 Identity = 224/488 (45.90%), Postives = 309/488 (63.32%), Query Frame = 0 Query: 18 EASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEE-DVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGL--YSTTFDEKHSHLIPNRDFVRPQEEP------STLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGT 496 AS RL++ L +YN +IRPV N SD + + + +SQ++ VD QI+ TN+W++Q W+DYKLKW+P +YGG + VP+Q IW PDIVLYNNA G+++V TKA+L Y+G+VTW PPAI+KSSC IDV +FPFD Q C MKFGSW+YD +DL I M+L++Y+ S EW ++ +++ Y CCEE YPDI ++L +RR LFYT+N+IIPC+ ISFL+VLVFYLPSD GEKV+L IS+LLSLTVF L++ E IP TS +PL+G+YLLFTMI VT S+V+T+ VLNV++RTP TH M WVK F+++LP+ +F+ RP E + +Y S N S E E YP +G+ Y K S+ N E S L+P ++ A+ ++K++A+++K ++ + DDWKYVAMV+DRI LW FT+ C+LGT Sbjct: 30 RASEAEHRLFERLFEDYNEIIRPVANVSDPVIIHFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWNPSDYGGAEFMRVPAQKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGS---------SMNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPSWVKTVFLNLLPRVMFMTRPTSNEGNAQKPRPLYGAELSNLNCFSRAESKGCKE----------GYPC-------QDGMCGYCHHRRIKISNFSANLTRSSSSESVDAVLSLSALSPEIKEAIQSVKYIAENMKAQNEAKEIQDDWKYVAMVIDRIFLWVFTLVCILGT 491
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|584718|sp|Q07263.1|ACHA3_BOVIN (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 426.017 bits (1094), Expect = 9.200e-144 Identity = 222/490 (45.31%), Postives = 312/490 (63.67%), Query Frame = 0 Query: 17 LEASPDAK-RLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEE-DVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGL--YSTTFDEKHSHLIPNRDFVRPQEEP------STLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGT 496 + ++ DA+ RL++ L +YN +IRPV N SD + ++ + +SQ++ VD QI+ TN+W++Q W+DYKLKW+P +Y G + VP++ IW PDIVLYNNA G+++V TKA+L Y+G+VTW PPAI+KSSC IDV +FPFD Q C MKFGSW+YD +DL I M+L++Y+ S EW ++ +++ Y CCEE YPDI ++L +RR LFYT+N+IIPC+ ISFL+VLVFYLPSD GEKV+L IS+LLSLTVF L++ E IP TS +PL+G+YLLFTMI VT S+V+T+ VLNV++RTP TH M WVK F+++LP+ +F+ RP E + Y S N S E + E YP +GL Y K S+ N E S L+P ++ A+ ++K++A+++K ++ + DDWKYVAMV+DRI LW F + C+LGT Sbjct: 18 VASTSDAEHRLFERLFEDYNEIIRPVANVSDPVIIQFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWNPSDYDGAEFMRVPAEKIWKPDIVLYNNAVGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGS---------SMNLKDYWESGEWAIIKAPGYKHDIKYNCCEEIYPDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPAWVKTIFLNLLPRVMFMTRPASNEGNTQRPRPFYSAELSNLNCFSRIESKVCKE----------GYPC-------QDGLCGYCHHRRAKISNFSANLTRSSSSESVDAVLSLSALSPEIKEAIQSVKYIAENMKAQNEAKEIQDDWKYVAMVIDRIFLWVFILVCILGT 481
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Match: gi|62901487|sp|Q8R4G9.1|ACHA3_MOUSE (RecName: Full=Neuronal acetylcholine receptor subunit alpha-3; Flags: Precursor) HSP 1 Score: 424.476 bits (1090), Expect = 4.736e-143 Identity = 222/485 (45.77%), Postives = 303/485 (62.47%), Query Frame = 0 Query: 19 ASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRP-EPEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEP------STLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGT 496 AS RL+ L +YN +IRPV N S + ++ + +SQ++ VD QI+ TN+W++Q W+DYKLKW P +Y GV + VP++ IW PDIVLYNNADG+++V TKA+L Y+G+VTW PPAI+KSSC IDV +FPFD Q C MKFGSW+YD +DL I M+L++Y+ S EW ++ ++E Y CCEE Y DI ++L +RR LFYT+N+IIPC+ ISFL+VLVFYLPSD GEKV+L IS+LLSLTVF L++ E IP TS +PL+G+YLLFTMI VT S+V+T+ VLNV++RTP TH M WVK F+++LP+ +F+ RP EED Y S N S + E YP Y K S+ N E S L+P ++ A+ ++K++A+++K ++ + DDWKYVAMV+DRI LW F + C+LGT Sbjct: 25 ASEAEHRLFQYLFEDYNEIIRPVANVSHPVIIQFEVSMSQLVKVDEVNQIMETNLWLKQIWNDYKLKWKPSDYQGVEFMRVPAEKIWKPDIVLYNNADGDFQVDDKTKALLKYTGEVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWSYDKAKIDLVLIGS---------SMNLKDYWESGEWAIIKAPGYKHEIKYNCCEEIYQDITYSLYIRRLPLFYTINLIIPCLLISFLTVLVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIVITVFVLNVHYRTPTTHTMPTWVKAVFLNLLPRVMFMTRPTSTEEDAPKTRNFYGAELSNLNCFSRADSKSCKE----------GYPCQ-----DGTCGYCHHRRVKISNFSANLTRSSSSESVDAVLSLSALSPEIKEAIQSVKYIAENMKAQNVAKEIQDDWKYVAMVIDRIFLWVFILVCILGT 485
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|1061480309|gb|ODM97750.1| (Acetylcholine receptor subunit alpha-like 2 [Orchesella cincta]) HSP 1 Score: 670.233 bits (1728), Expect = 0.000e+0 Identity = 330/508 (64.96%), Postives = 398/508 (78.35%), Query Frame = 0 Query: 16 GLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKK 523 G E +PDAKRLYDDLLSNYNRLIRPVGN+SDRLTVKLGLKLSQ+I V++K QI+ TNVWVEQEWHDYKL W+PE+YGGV LHVPS++IWLPDIVLYNNADGNYEVTIMTKA+L+Y+G V W PPAIYKSSC+IDVE+FPFD+Q C MKFGSWTYDGY VDLRHINQ +N IE+G+DLQ+YYIS EWD+M A RNEKYY CCEEPYPDI FN+ LRRK+LFYTVN+IIPCVGISFLSVLVFYLPSDSGEK+SL ISILLSLTVFFLLLAEIIPPTS +VPLLGKYLLFTMIL+T SV+VTIG+LNVN+R+PATHKM+PWV++ F+++LPKYL I+RP ++D D S ++ ++ + GL + P P+ PS S + +H +F + PS +E++ ++F+AQH+KN+D FE +DWKYVAMVLDR+ LW FT +C+LGT II AP+ +DS +PIDV+YSKI K+ Sbjct: 36 GTEGNPDAKRLYDDLLSNYNRLIRPVGNNSDRLTVKLGLKLSQLIDVNLKNQIMTTNVWVEQEWHDYKLMWNPEDYGGVETLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILNYTGTVRWKPPAIYKSSCEIDVEYFPFDQQTCTMKFGSWTYDGYTVDLRHINQTLDSNDIELGIDLQDYYISVEWDIMGVPAARNEKYYSCCEEPYPDIMFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKMSLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILITLSVMVTIGILNVNYRSPATHKMSPWVRQLFIELLPKYLLIKRPN-KDDDGDDDDDDNNPAPRSLVMGQQDSLQVCHIHGLNPPQEIDMPFYPS--LPSPIFLSESEALRH-------NFGEVRRFPS----EIEKSATNIRFIAQHMKNKDRFEAIEEDWKYVAMVLDRLFLWIFTSSCILGTIGIIFQAPSLYDSTRPIDVLYSKIAKQ 529
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|1325271350|ref|XP_023320284.1| (acetylcholine receptor subunit alpha-like 1 [Eurytemora affinis]) HSP 1 Score: 667.537 bits (1721), Expect = 0.000e+0 Identity = 347/529 (65.60%), Postives = 411/529 (77.69%), Query Frame = 0 Query: 14 LVGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPE-----EDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNN---DNLAYPLSPTDDWPSEGLY------STTFDEK-HSHLIPNR-DFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKKNTI 526 V A+PDAKRLY++LL+NY+RLIRPV NSSDRLTV L LKLSQ+IGVDM+RQI+ TNVWVEQEW DYKL WDP +YGGV+HLHVPSQ+IWLPDIVLYNNADGNYE+TIMTKA+LHY+G+VTW PPAIYKS C IDVEFFPFDEQ+C MKFGSW++DG MVDLRH+NQ N I + MDL+++YISTEWD+M AVRNEK+YPCCEEPYPDI F + LRRK+LFY VN+IIPCVGISFLSVLVFYLPS+SGEK+SLSISILLSLTVFFLLLAEIIPPTS SVPLLGKYLLFTMILVT SVVVTIGVLNVNFRTPATHKMAPWV+KTF+D LP+YLFI+RP+P+ E + LG + NLV + L L N+ D + L P+ + + + F+ K + HL N F + P + RA++A++FVAQHVKN+D ++ ADDWKYVAMVLDRILLW F+ ACV GT II AP+ +D+R+P+DV+ SK+ KKNTI Sbjct: 14 FVECTANPDAKRLYENLLANYDRLIRPVANSSDRLTVHLRLKLSQVIGVDMRRQILTTNVWVEQEWRDYKLSWDPADYGGVKHLHVPSQDIWLPDIVLYNNADGNYEITIMTKAILHYNGRVTWTPPAIYKSYCGIDVEFFPFDEQECRMKFGSWSHDGLMVDLRHMNQVPSNNNIPVAMDLRDFYISTEWDVMAVPAVRNEKFYPCCEEPYPDIVFRIYLRRKTLFYVVNLIIPCVGISFLSVLVFYLPSESGEKISLSISILLSLTVFFLLLAEIIPPTSLSVPLLGKYLLFTMILVTFSVVVTIGVLNVNFRTPATHKMAPWVRKTFIDFLPRYLFIQRPDPDPVEEDERTELLGGL--------NLVFPETLEERNSVERLLNHAQYDGGGFRLGPSGNGNQSHMMLQNIAQNNQFNGKDNGHLTLNSVRFDSGFRDYGDQEPHLTRAIHAVQFVAQHVKNQDRYDKVADDWKYVAMVLDRILLWVFSFACVAGTGGIIFVAPSLYDTREPLDVLVSKVGKKNTI 534
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|1111915303|gb|API81618.1| (nicotinic acetylcholine receptor alpha 1, partial [Cancer borealis]) HSP 1 Score: 667.537 bits (1721), Expect = 0.000e+0 Identity = 327/508 (64.37%), Postives = 401/508 (78.94%), Query Frame = 0 Query: 19 ASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTD-DWPSEGLYSTTFDEKHSHL-IPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKKN 524 A+PDAKRLYDDLLS+YNRLIRPVGN+SDRLTVKLGLKLSQ+I V++K QI+ TNVWVEQEW DYKL W+PEEYGGV LHVPS++IWLPDIVLYNNADGNYEVTIMTKA+LHY G+VTW PPAIYKSSC+IDVEFFPFD+Q CFMKFGSWTYDGYMVDL+H++Q++G+N ++ G+DL +YYIS EWD++ A+RNE++YPCC+EPYPDI+FN+ +RRK+LFYTVN+IIPCVGISFLSVLVFYLPSDSGEKVSL ISILLSLTVFFLLLAEIIPPTS +VPLLGKYLLFTMILVT SV+VTIGVLNVNFR+P+THKMAPWV+K F+D+LPK+L++ RP EE+ D + T + + P + A P SP D D + E H+ + P FV+ ++P N R + +++++AQH++N D+F DDW+YVAMVLDR+ LW F VACVLGTC II AP+ +D+ PID+ SK+ ++ Sbjct: 25 ANPDAKRLYDDLLSSYNRLIRPVGNNSDRLTVKLGLKLSQLIDVNLKNQIMTTNVWVEQEWRDYKLVWEPEEYGGVEILHVPSEHIWLPDIVLYNNADGNYEVTIMTKAMLHYDGRVTWKPPAIYKSSCEIDVEFFPFDQQTCFMKFGSWTYDGYMVDLQHLHQQRGSNLVDPGIDLNDYYISVEWDILKVPALRNERFYPCCQEPYPDIYFNITMRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSVMVTIGVLNVNFRSPSTHKMAPWVRKVFIDLLPKFLWVERPNKEEEGPDEVTAGGDTSFTPSSDGFDKFPFDDHPYEIP-----AIPPSPYDRDRYGDDHLPLPAPECHAQIHTPEAAFVQELDDPRPYND--HRTLRSIEYIAQHMRNVDSFSEIEDDWRYVAMVLDRLFLWIFMVACVLGTCGIIFRAPSLYDTTLPIDIQLSKVAQRR 525
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|1111915477|gb|API81630.1| (nicotinic acetylcholine receptor alpha 1 [Homarus americanus]) HSP 1 Score: 665.226 bits (1715), Expect = 0.000e+0 Identity = 329/525 (62.67%), Postives = 410/525 (78.10%), Query Frame = 0 Query: 18 EASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEP-EEDVDDLGVMYETSKSTSNLVSSK--------ELPMITE---NSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKKNTIFTMN 530 +A+PDAKRLYDDLLS+YNRLIRPVGN+SDRLTVKLGLKLSQ+I V++K QI+ TNVWVEQEW DYKL W+PE+YGGV LHVPS++IWLPDIVLYNNADGNYEVTIMTKAVLHY G+VTW PPAIYKSSC+IDVEFFPFD+Q CFMKFGSWTYDGYMVDL+H++Q++G+N ++ G+DL +YYIS EWD++ A+RNE++YPCC+EPYPDI+FN+ +RRK+LFYTVN+IIPCVGISFLSVLVFYLPSDSGEKVSL ISILLSLTVFFLLLAEIIPPTS +VPLLGKYLLFTMILVT SV+VTIGVLNVNFR+P+THKMAPWV+K F+++LPK+L++ RP+ EE D++ +TS + S+ K ++P I + +D+LA P + H+H + FV EEP + R + +++++AQH++N D+F DDW+YVAMVLDR+ LW F VACVLGTC II AP+ +D+ PID+ SK+ ++ + M Sbjct: 13 QANPDAKRLYDDLLSSYNRLIRPVGNNSDRLTVKLGLKLSQLIDVNLKNQIMTTNVWVEQEWKDYKLVWEPEDYGGVEILHVPSEHIWLPDIVLYNNADGNYEVTIMTKAVLHYDGRVTWKPPAIYKSSCEIDVEFFPFDQQTCFMKFGSWTYDGYMVDLQHLHQQRGSNLVDPGIDLNDYYISVEWDILKVPALRNERFYPCCQEPYPDIYFNITMRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKVSLCISILLSLTVFFLLLAEIIPPTSLAVPLLGKYLLFTMILVTLSVMVTIGVLNVNFRSPSTHKMAPWVRKVFIEMLPKFLWVERPKKDEEGPDEVTAGGDTSFTPSSDGFDKFPFEDHPYDIPAIPPSPYDRDRYGDDHLALPA------------PECHSQSHAHEVA---FVPELEEPRPYHD--HRTLRSIEYIAQHMRNVDSFGEIEDDWRYVAMVLDRLFLWIFMVACVLGTCGIIFRAPSLYDTTLPIDIQLSKVAQRRRLDLMG 520
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|157954035|ref|NP_001103245.1| (nicotinic acetylcholine receptor alpha1 subunit precursor [Tribolium castaneum] >gi|154810967|gb|ABS86902.1| nicotinic acetylcholine receptor subunit alpha1 [Tribolium castaneum] >gi|270002818|gb|EEZ99265.1| nicotinic acetylcholine receptor subunit alpha1 [Tribolium castaneum]) HSP 1 Score: 664.455 bits (1713), Expect = 0.000e+0 Identity = 335/529 (63.33%), Postives = 405/529 (76.56%), Query Frame = 0 Query: 17 LEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDD------------LGVMYETSKSTSNLVSSKEL----PMITENSGLTNNDNLAYPLSPTDDWPSEGLYS------TTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKK 523 + + DAKRLYDDLLSNYNRLIRPVGN+SDRLTVK+GLKLSQ+I V++K QI+ TNVWVEQEW+DYKLKW+P++Y GV LHVPS++IWLPDIVLYNNADGNYEVTIMTKA+LH++GKV W PPAIYKS C+IDVE+FPFDEQ CFMKFGSWTYDGYMVDLRH++Q + +N+I++G+DLQ+YYIS EWD+M AVRNEK+Y CCEEPYPDI FN+ LRRK+LFYTVN+IIPCVGISFLS+LVFYLPSDSGEKVSL ISILLSLTVFFLLL EIIPPTS +VPLLGKYLLFTM+L T SVV+TI VLNVNFR+P THK+APWV+ F+D+LPK+LFI RP+ E+D D+ + +M + S +L P E SG PLS D E LYS TFD S P+ D + + +E+ + +F+AQHV+N+D+FE A+DWKYVAMVLDR+ LW FT+ACV+GT LII AP+ +D+ KPIDV+ SK+ KK Sbjct: 18 VSGNQDAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLKLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYNGVETLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLSQVQDSNKIDVGIDLQDYYISVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSILVFYLPSDSGEKVSLCISILLSLTVFFLLLVEIIPPTSITVPLLGKYLLFTMLLCTLSVVITIAVLNVNFRSPVTHKLAPWVRVFFIDILPKFLFIERPKKEDDDDNKCQDSMLTDVIQVPMMDKCKPFEKTSFDSFDLGLPPPSRFEASGCFGEPPFPMPLSGGD----EDLYSPASCRTNTFDGT-SDASPSFDKLDMHD--------MEKTLADSRFIAQHVRNKDSFENVAEDWKYVAMVLDRLFLWIFTLACVVGTGLIIFNAPSLYDTTKPIDVLISKVAKK 533
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|118781880|ref|XP_311918.3| (AGAP002974-PA [Anopheles gambiae str. PEST] >gi|51873075|gb|AAU12503.1| nicotinic acetylcholine receptor subunit alpha 1 [Anopheles gambiae] >gi|116129303|gb|EAA08125.3| AGAP002974-PA [Anopheles gambiae str. PEST]) HSP 1 Score: 663.685 bits (1711), Expect = 0.000e+0 Identity = 333/542 (61.44%), Postives = 401/542 (73.99%), Query Frame = 0 Query: 3 VGLVASLLVYNLVGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEEDVDDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTD--DWPSEGLYSTTFDEKHSHLIP----NRDFVRPQE------------EPSTLNP---AVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKK 523 V L A + A+PD+KRLYDDLLSNYNRLIRPVGN+SDRLTVK+GL+LSQ+I V++K QI+ TNVWVEQEW+DYKLKW+P++YGGV LHVPS++IWLPDIVLYNNADGNYEVTIMTKA+LH++GKV W PPAIYKS C+IDVE+FPFDEQ CFMKFGSWTYDGYMVDLRH+ Q ++ I++G+DLQ+YYIS EWD+M AVRNEK+Y CCEEPYPDI FN+ LRRK+LFYTVN+IIPCVGISFLSVLVFYLPSDSGEK+SL ISILLSLTVFFLLLAEIIPPTS +VPLLGKYLLFTM+LVT SVVVTI VLNVNFR+P TH+MAPWV + F+++LPK L I RP+ E++ D T T ++ G + P P D + G F E +P + D P P+ P +E+ + A +FVAQHV+N+D FE +DWKYVA+VLDR+ LW FT+ACVLGTCLII+ AP+ +D+ +PID +YSKI KK Sbjct: 4 VLLTAVFIALQFATGLANPDSKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLQQTPDSDNIDIGIDLQDYYISVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHRMAPWVHRVFIELLPKVLCIERPKKEDEPSDNDDQTPTDVLTDVFQVPPDVEKYVGFCGKEYGTDFDIPALPPSRFDVAASGGVGPCFGEPPLPALPLPGGDDDLFSPTGNGDMSPTCCGDLSPTFEKPLLREMEKTIEASRFVAQHVRNKDKFESVKEDWKYVALVLDRLFLWIFTIACVLGTCLIILQAPSLYDNTQPIDAMYSKIAKK 545
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|170042308|ref|XP_001848873.1| (acetylcholine receptor protein alpha 1, 2, 3, 4 invertebrate [Culex quinquefasciatus] >gi|167865802|gb|EDS29185.1| acetylcholine receptor protein alpha 1, 2, 3, 4 invertebrate [Culex quinquefasciatus]) HSP 1 Score: 659.833 bits (1701), Expect = 0.000e+0 Identity = 333/544 (61.21%), Postives = 402/544 (73.90%), Query Frame = 0 Query: 3 VGLVASLLVYNLVGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRP----EPEEDV----DDLGVMYETSKSTSNLVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEP-------STLNPAVERAM--------NALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKK 523 V L A + NL A+PD+KRLYDDLLSNYNRLIRPVGN+SDRLTVK+GL+LSQ+I V++K QI+ TNVWVEQEW+DYKLKW+P++YGGV LHVPS++IWLPDIVLYNNADGNYEVTIMTKA+LH++GKV W PPAIYKS C+IDVE+FPFDEQ CFMKFGSWTYDGYMVDLRH+ Q ++ I +G+DLQ+YYIS EWD+M AVRNEK+Y CCEEPYPDI FN+ LRRK+LFYTVN+IIPCVGISFLSVLVFYLPSDSGEK+SL ISILLSLTVFFLLLAEIIPPTS +VPLLGKYLLFTM+LVT SVVVTI VLNVNFR+P THKMAPWV + F+D+LP+ L I+RP EP E+ + L +++ V T+ + + + L S + H + + D P L+P E+ M A +FVAQHV+N+D FE +DWKYVA+VLDR+ LW FT+ACV+GTCLII+ AP+ +D+ +PID +YSKI KK Sbjct: 4 VLLTAVFIALNLATGLANPDSKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDMLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLQQTPDSDNIAVGIDLQDYYISVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHKMAPWVHRVFIDLLPRVLCIQRPKKDDEPSENEELPPEVLTDVFQVPPDVEKYVGYCGKQYSTDFDIPGDTATVTFRRGRIGRGGGHVLASPRYQHCH-YRAGDDDLFSPTGNGDMSPNCCGDLSPTFEKPMLREMEKTIEASRFVAQHVRNKDKFESIEEDWKYVALVLDRLFLWIFTIACVVGTCLIILQAPSLYDNTQPIDAMYSKIAKK 546
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|1067107213|ref|XP_018013894.1| (PREDICTED: acetylcholine receptor subunit alpha-like 1 [Hyalella azteca]) HSP 1 Score: 658.292 bits (1697), Expect = 0.000e+0 Identity = 335/541 (61.92%), Postives = 407/541 (75.23%), Query Frame = 0 Query: 19 ASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRP--EPEEDVDDLGVMYETSKSTSNLVSSK--ELPMI----------TENSGLTNNDNLAYPLSPT-----------DDWPSEGLYSTTFDEKHSHLIPNRD-----FVRPQ--EEPSTL---NPAVE-RAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKK 523 A+P+AKRLY+DLLS YNRLIRPVGN+SDRLTVKLGLKLSQ+I V++K QI+ TNVWV QEW DYKL W+PEEYGGV+ LHVPSQ+IWLPDIVLYNNADGNYEVTIMTKA+LH++G+V W PPAIYKSSC+IDVE+FPFD+Q CFMKFGSWTYDGYMVDL+H++Q+ +N ++ G+DLQEYYISTEWD++ AVRNEK+YPCCEEPYPDI+FN+ +RRK+LFYTVN+IIPCVGISFLSVLVFYLPSDS EKVSL IS+LLSLTVFFLLLAEIIPPTS SVPLLGKYLLFTMILVT SV+VTIGVLNVNFR+P+THKMAPWV+ F+D LPKYL++ RP + +ED D L ++ TS + + ++P I +++ D LA P P DD PS + T + + N D +R EE T+ P+ E + ++ ++AQH+KN D FE DW+YVAMVLDR+ LW FT+A VLGT II AP +D+ PIDVI SK+ +K Sbjct: 33 ANPEAKRLYEDLLSTYNRLIRPVGNNSDRLTVKLGLKLSQLIDVNLKNQIMTTNVWVNQEWSDYKLVWNPEEYGGVQTLHVPSQHIWLPDIVLYNNADGNYEVTIMTKAILHHNGRVKWTPPAIYKSSCEIDVEYFPFDQQTCFMKFGSWTYDGYMVDLQHLDQRADSNVVDPGIDLQEYYISTEWDILTVPAVRNEKFYPCCEEPYPDIYFNITMRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSNEKVSLCISVLLSLTVFFLLLAEIIPPTSLSVPLLGKYLLFTMILVTFSVMVTIGVLNVNFRSPSTHKMAPWVRYVFIDSLPKYLWVERPSKDEDEDTDTLAIITPTSDTLKFDIDDAPYDIPAIPPSRYDRDRYGDSTKFFPTDTLALPAPPPRVDDSALIDELDDTPSTEQKTYTSINYIAQHMKNVDTFEEAMIRAGTFEEEGTMIDDTPSTEQKTYTSINYIAQHMKNVDTFEEIEQDWRYVAMVLDRLFLWIFTLAGVLGTVGIIFRAPALYDTTPPIDVIMSKVAQK 573
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|1048015586|ref|XP_017468787.1| (PREDICTED: acetylcholine receptor subunit alpha-like 1 [Rhagoletis zephyria]) HSP 1 Score: 657.136 bits (1694), Expect = 0.000e+0 Identity = 329/532 (61.84%), Postives = 400/532 (75.19%), Query Frame = 0 Query: 16 GLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRPEPEE-------------------DVDDLGVMYETSKSTSN-----LVSSKELPMITENSGLTNNDNLAYPLSPTDDWPSEGLYSTTFDEKHSHLIPNRDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKK 523 G A+PDAKRLYDDLLSNYNRLIRPVGN+SDRLTVK+GL+LSQ+I V++K QI+ TNVWVEQEW+DYKLKW+P++YGGV LHVPS++IWLPDIVLYNNADGNYEVTIMTKA+LH++GKV W PPAIYKS C+IDVE+FPFDEQ CFMKFGSWTYDGYMVDLRH+ Q ++ IE+G+DLQ+YYIS EWD+M AVRNEK+Y CCEEPY DI FNL LRRK+LFYTVN+IIPCVGISFLSVLVFYLPSDSGEK+SL ISILLSLTVFFLLLAEIIPPTS +VPLLGKYLLFTM+LVT SVVVTI VLNVNFR+P THKMAPWV++ F+ +LPK L I RP+ E+ DVD V Y++ + + + L +S + + P + + L+S + + S + D ++P +E+ + +F+AQHVKN+D FE +DWKYVAMVLDR+ LW F +ACV+GT LII+ AP+ +D +PID++YSKI KK Sbjct: 286 GGLANPDAKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDTLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYMVDLRHLKQTADSDNIEVGIDLQDYYISVEWDIMRVPAVRNEKFYSCCEEPYLDIVFNLTLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHKMAPWVQRLFIQILPKLLCIERPKKEDPNEDDQPPEVLTDVFHLPPDVDKF-VNYDSKRFSGDYGIPALPASHRFDLAAAGGIAPCFGDPPLPSALPLPGADDDLFSPSGNGDLSPGCCHADLSPTFDKPYMRE--MEKTIEGSRFIAQHVKNKDKFESVEEDWKYVAMVLDRLFLWIFAIACVVGTALIILQAPSLYDQSQPIDILYSKIAKK 814
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Match: gi|1121157312|ref|XP_019565384.1| (PREDICTED: acetylcholine receptor subunit alpha-like 1 isoform X1 [Aedes albopictus]) HSP 1 Score: 656.751 bits (1693), Expect = 0.000e+0 Identity = 338/553 (61.12%), Postives = 409/553 (73.96%), Query Frame = 0 Query: 3 VGLVASLLVYNLVGLEASPDAKRLYDDLLSNYNRLIRPVGNSSDRLTVKLGLKLSQIIGVDMKRQIVITNVWVEQEWHDYKLKWDPEEYGGVRHLHVPSQNIWLPDIVLYNNADGNYEVTIMTKAVLHYSGKVTWNPPAIYKSSCDIDVEFFPFDEQKCFMKFGSWTYDGYMVDLRHINQKKGTNRIEMGMDLQEYYISTEWDLMDTWAVRNEKYYPCCEEPYPDIFFNLILRRKSLFYTVNVIIPCVGISFLSVLVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSKSVPLLGKYLLFTMILVTCSVVVTIGVLNVNFRTPATHKMAPWVKKTFVDVLPKYLFIRRP----EPEEDVDD----LGVMYETSKSTSNLVS--SKELPMITENSGLTNNDNLAYPLSPTDDWPSEG---------------------LYSTTFDEKHSHLIPN-RDFVRPQEEPSTLNPAVERAMNALKFVAQHVKNEDNFEGFADDWKYVAMVLDRILLWTFTVACVLGTCLIIMAAPTHHDSRKPIDVIYSKIDKK 523 V L A + + A+PD+KRLYDDLLSNYNRLIRPVGN+SDRLTVK+GL+LSQ+I V++K QI+ TNVWVEQEW+DYKLKW+P++YGGV LHVPS++IWLPDIVLYNNADGNYEVTIMTKA+LH++GKV W PPAIYKS C+IDVE+FPFDEQ CFMKFGSWTYDGY+VDLRH+ Q ++ I++G+DLQ+YYIS EWD+M AVRNEK+Y CCEEPYPDI FN+ LRRK+LFYTVN+IIPCVGISFLSVLVFYLPSDSGEK+SL ISILLSLTVFFLLLAEIIPPTS +VPLLGKYLLFTM+LVT SVVVTI VLNVNFR+P THKMAPWV + F+++LP+ L I RP EP E+ + L +++ VS KE + + LA P S D S G L+S T + + PN V P E L +E+ + A +FVAQHV+N+D FE +DWKYVA+VLDR+ LW FT+ACV+GT LII+ AP+ +D+ +PID +YSKI KK Sbjct: 4 VLLTAVFIALHFATGLANPDSKRLYDDLLSNYNRLIRPVGNNSDRLTVKMGLRLSQLIDVNLKNQIMTTNVWVEQEWNDYKLKWNPDDYGGVDQLHVPSEHIWLPDIVLYNNADGNYEVTIMTKAILHHTGKVVWKPPAIYKSFCEIDVEYFPFDEQTCFMKFGSWTYDGYLVDLRHLQQTPDSDNIDVGIDLQDYYISVEWDIMKVPAVRNEKFYSCCEEPYPDIIFNITLRRKTLFYTVNLIIPCVGISFLSVLVFYLPSDSGEKISLCISILLSLTVFFLLLAEIIPPTSLTVPLLGKYLLFTMMLVTLSVVVTIAVLNVNFRSPVTHKMAPWVHRVFIELLPRVLCIERPKKDDEPSENEEQAPEVLTDVFQVPPDVEKYVSYCGKEYTTDFDIPVSIPSSPLALPPSRFDVAASGGVGPCFGEPPLPALPLPGGDDDLFSPT---SNGDMSPNCCGDVSPTFEKPLLR-EMEKTIEASRFVAQHVRNKDKFESIEEDWKYVALVLDRLFLWIFTIACVMGTALIILQAPSLYDNTQPIDAMYSKIAKK 552 The following BLAST results are available for this feature:
BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of nicotinic acetylcholine receptor subunit alpha1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold33_size549341:1743..5575+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold33_size549341-snap-gene-0.15 ID=maker-scaffold33_size549341-snap-gene-0.15|Name=nicotinic acetylcholine receptor subunit alpha1|organism=Tigriopus kingsejongensis|type=gene|length=3833bp|location=Sequence derived from alignment at scaffold33_size549341:1743..5575+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'nicotinic acetylcholine receptor subunit alpha1' has the following synonyms
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