rna pseudouridylate synthase domain-containing protein 3, maker-scaffold384_size188899-snap-gene-0.31 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. L. salmonis genes
Match: EMLSAG00000009610 (supercontig:LSalAtl2s:LSalAtl2s618:145854:146906:-1 gene:EMLSAG00000009610 transcript:EMLSAT00000009610 description:"maker-LSalAtl2s618-augustus-gene-1.19") HSP 1 Score: 124.405 bits (311), Expect = 2.572e-33 Identity = 82/246 (33.33%), Postives = 128/246 (52.03%), Query Frame = 0 Query: 50 AQVGRFRTLDDLVEHLA-SNVLYHEPDKASDGLVAINKPHGLPRYQTDNCPVSLEKALPALAKMLEVKTLLPIKMPERHCSGVCLMAKSEESKARITKILAGVKHDTRLIDNYWVLTNGFPRFIENLEVFDQSLHLVGVRAMEKGQKHVEPILSRVLMSDSATARIKKRKGDVPNRIRVHSKTLARSGLGKAALVSVQPTKTSNNFIFVYMNDLLSPIIGDHLYSYRCRVTMGVMSRINYSQAPTN 294 ++VG ++ +L +LA S VLY + GL+ INKP L + SL + +P L +L++ L I PER +G+ ++ + ESK + + K L +Y LT+GFPR E D + G K VEP+L+R L S + K R + ++TL +S LG++ALV V P+ N+FI +YM+DLLSP++GD LYSYR G ++++++ +P N Sbjct: 7 SKVGVWKNRSELTSYLANSCVLYRD-----HGLLVINKPFNLGISPSTQNEFSLPEIIPELKDILQLPYLDYISSPERFSTGLLILGTTPESKNLVKRAKNRSKSYKLLHQSYLTLTDGFPRINNKFETID------SYKYAYSGTKSVEPVLTRNLYSKTKLKSSKSLL-----RYYLFTETLVKSSLGQSALVCVSPSSIENHFIQLYMSDLLSPVLGDFLYSYRVNSINGYPTKVSHTSSPPN 236
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. L. salmonis genes
Match: EMLSAG00000012192 (supercontig:LSalAtl2s:LSalAtl2s881:105680:107477:-1 gene:EMLSAG00000012192 transcript:EMLSAT00000012192 description:"maker-LSalAtl2s881-augustus-gene-1.37") HSP 1 Score: 63.929 bits (154), Expect = 1.324e-11 Identity = 37/112 (33.04%), Postives = 65/112 (58.04%), Query Frame = 0 Query: 60 DLVEHLASNVLYHEPDKASDGLVAINKPHGLPRYQTDNCPVSLEKALPALAKMLEVKT--LLPIKMPERHCSGVCLMAKSEESKARITKILAGVKHDTRLIDNYWVLTNGFP 169 ++ + L ++++Y++ DG+VA+NKP+GLP DN P S+ K LP L+ LE+ + L + ++ +GV L++ +EES +R+T ++ YW +TNG P Sbjct: 316 EMEKMLQNSIIYNK-----DGIVALNKPYGLP-MSDDNFPHSILKYLPKLSDYLEIPSGALTHVHRLDKTTTGVLLLSSTEESHSRLTNYF----RQRKITKIYWAITNGVP 417
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. SwissProt
Match: gi|123796151|sp|Q14AI6.1|RUSD3_MOUSE (RecName: Full=Mitochondrial mRNA pseudouridine synthase Rpusd3; AltName: Full=RNA pseudouridylate synthase domain-containing protein 3; Flags: Precursor) HSP 1 Score: 66.2402 bits (160), Expect = 4.548e-11 Identity = 72/278 (25.90%), Postives = 118/278 (42.45%), Query Frame = 0 Query: 19 WRPMLPR-------ALASDASHRHHPEKSSK-MNIVQELAQVGRFRTLDDLVEHLASNVLYHEPDKASDGLVAINKPHGLPRYQTDNCPVSLEKALPALAKML--EVKTLLPIKMPERHCSGVCLMAKSEESKARITKILAGVKHDTRLIDNYWVLTNGFPRFIENLEVFDQSLHLVGVRAMEKGQKHVEPILSRVLMSDSATARIKKRKGDVPNRIRVHSKTLAR-----SGLGKAALVSVQPTKTSNNFIFVYMNDLLSPIIGDHLYSYRCRVTMG 281 WRP L ++A P +SSK ++V++ G RT + +E LA +VL LV +NKP GLP ++L LP L++ L E + L ++ P + SG+ L++ ++ +R+ K + R Y +T+G P E G M + + + D A + + D+ ++ +TL+R +G G ALV +QP N + V+M L PI+GDH Y+ R +G Sbjct: 14 WRPELGSCARQRDAGFGTEARRPSQPHRSSKHKDLVEDQPFPGLLRTENLGLEELA-HVLRAAVVDQKGPLVTLNKPQGLPVTGRPG-ELTLLSVLPQLSQALGLEHQELQVVRAPGKEASGLVLLSSCPQTASRLQKFFIHSRRAQRPTATYCAVTDGIPEPSE------------GTVCMPLKMEQMNDV-------DLAVPVMSPSRKDIQEGVK---RTLSRFHVMATGRG-CALVQLQPLTVFPNQLQVHMALQLCPILGDHTYAARVGTVLG 266
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. SwissProt
Match: gi|74731354|sp|Q96CM3.1|RUSD4_HUMAN (RecName: Full=Mitochondrial RNA pseudouridine synthase RPUSD4; AltName: Full=RNA pseudouridylate synthase domain-containing protein 4; Flags: Precursor) HSP 1 Score: 56.225 bits (134), Expect = 1.089e-7 Identity = 59/242 (24.38%), Postives = 111/242 (45.87%), Query Frame = 0 Query: 61 LVEHLASNVLYHEPDKASDGLVAINKPHGLPRYQTDNCPVSLEKALPALAKMLEVKTLLPIKMPER---HCSGVCLMAKSEESKARITKILAGVKHDTRLIDNYWVLTNGFPRFIENLEVFDQSLHLVGVRAMEKGQKHVEPILSRVLMSDSATARIKK-RKGDVP-NRIRVHSKTLARSGLGKAALVSVQPTKTSNNFIFVYMN-DLLSPIIGDHLYSYRCR-----VTMGVMSRINYSQA 291 L + L +L+ + + LV INKP+GLP + + + LP LAKML P+ + R +GV ++A ++ ++ ++ +++ YW +T P + + V D + +V A + Q H + M D ++++ R V + +V S TL+ +ALV +QP + + V+++ L PI+GDH YS R +++G + ++ Q+ Sbjct: 91 LAKALTRGILHQDKN-----LVVINKPYGLPVHGGPGVQLCITDVLPILAKMLHGHKAEPLHLCHRLDKETTGVMVLAWDKDMAHQVQELF----RTRQVVKKYWAITVHVP--MPSAGVVD--IPIVEKEAQGQQQHHKMTLSPSYRMDDGKMVKVRRSRNAQVAVTQYQVLSSTLS------SALVELQPITGIKHQLRVHLSFGLDCPILGDHKYSDWNRLAPQKLSVGTLKKLGLEQS 313
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. SwissProt
Match: gi|82182079|sp|Q6DBR0.1|RUSD4_DANRE (RecName: Full=Mitochondrial RNA pseudouridine synthase rpusd4; AltName: Full=RNA pseudouridylate synthase domain-containing protein 4; Flags: Precursor) HSP 1 Score: 55.0694 bits (131), Expect = 2.534e-7 Identity = 67/266 (25.19%), Postives = 114/266 (42.86%), Query Frame = 0 Query: 46 VQELAQVGRFRTLDDLVEHLASNVLYHEPDKASDGLVAINKPHGLPRYQTDNCPVSLEKALPALAKMLE-----VKTLLPIKMPERHCSGVCLMAKSEESKARITKILAGVKHDTRLIDNYWVLTNGFPRFIENLEVFDQSLHLVGVRAMEKGQKHVEPILSRVLMSDSATARIKKRKGDVPNRIRVHSKTLAR-------SGLGKAALVSVQPTKTSNNFIFVYMN-DLLSPIIGDHLYSYRCRVT-----MGVMSRINYSQAPT 293 V EL Q + L + + + LY ++AINKP+ +P + + S+ + LP LAK+ + + L K+ E+ +GV ++AK+EE+ + ++ K + + Y +T G P + + V D V RA+ Q H + LS + + GD R+R H + A +LV +QP N + V+M L PI+GDH YS+ ++ G + R+ Q+ T Sbjct: 65 VNELKQFSQ--QLQSVHPSVFAKALYRSSLYEDQNIIAINKPYDVPLHNINGIRNSIAECLPLLAKITDNMRPGSQLHLCHKL-EKETTGVLILAKTEEAAEHVQTLIQSHKVEMK----YLAITVGVP--VPSEGVIDIP---VIERAVVGPQPHFKMALSPLFKVNE--------DGDGVTRVRAHRQAHAAVTRYQVLDNTSGCSLVELQPLTGVKNQLRVHMALALTCPILGDHKYSHWSKLAPQKLPEGTLRRLGLVQSKT 310
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. SwissProt
Match: gi|123892314|sp|Q28C59.1|RUSD4_XENTR (RecName: Full=Mitochondrial RNA pseudouridine synthase rpusd4; AltName: Full=RNA pseudouridylate synthase domain-containing protein 4; Flags: Precursor) HSP 1 Score: 54.299 bits (129), Expect = 3.727e-7 Identity = 64/229 (27.95%), Postives = 102/229 (44.54%), Query Frame = 0 Query: 62 VEHLASNVLYHEPDKASDGLVAINKPHGLPRYQTDNCPVSLEKALPALAKMLEVKTLLPIKMP---ERHCSGVCLMAKSEESKARITKILAGVKHDTRLIDNYWVLTNGFPRFIENLEVFDQSLHLVGVRAMEKG----QKHVEPILS-RVLMSDSAT---ARIKKRKGDVPNRIRVHSKTLARSGLGKAALVSVQPTKTSNNFIFVYMN-DLLSPIIGDHLYSYRCRV 278 + L S V+ +P+ LV +NKPHGLP + S+ LPALAK P+K+ +R +G ++A++ E+ R+ + L + + YW L G P E ++ + MEK QKH + LS R +S+ R+ + + R R A SG A+LV + P + + V++ L PI+GDH YS+ R+ Sbjct: 44 LRELKSQVVREDPE-----LVLVNKPHGLPVHGGPTVERSVASLLPALAKHHFGWKAEPLKLCHRLDRDTTGALILARTTEAAERVQQAL----REREVHRVYWALCLGTPSPREG---------ILDIPIMEKETSGPQKHYKMALSPRFRVSEEGAVERVRVPRSAHEAVTRYRTLG---AASG---ASLVELHPITGVKHQLRVHLALGLNCPILGDHKYSHWGRL 248
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. nr
Match: gi|926620306|ref|XP_013775440.1| (RNA pseudouridylate synthase domain-containing protein 3-like [Limulus polyphemus] >gi|1238849411|ref|XP_022242701.1| RNA pseudouridylate synthase domain-containing protein 3-like [Limulus polyphemus]) HSP 1 Score: 93.9745 bits (232), Expect = 4.946e-18 Identity = 66/244 (27.05%), Postives = 120/244 (49.18%), Query Frame = 0 Query: 59 DDLVEHLASNVLYHEPDKASDGLVAINKPHGLPRYQTD--------------------NCPVSLEKALPALAKMLEVKTLLPIKMPERHCSGVCLMAKSEESKARITKILAGVKHDTRLIDNYWVLTNGFPRFIENLEVFDQSLHLVGVRAMEKGQK-HVEPILSRVLMSDSATARIKKRKGDVPNRIRVHSKTLARSGLGKAALVSVQPTKTSNNFIFVYMNDLLSPIIGDHLYSYRCRVTMG 281 D+ +E++ +++Y+ +DGL+ +NKP+G+P Y+ + CP LE AL AL L+ L +K ER+ SG+ L+A +E+ +I K + K + NYW +T G+P + + ++ VG++ +E GQ+ + +PI+ + S K R +V R +K L+ + L+ + + +F+ VY+ + +S ++GD LYS R R +G Sbjct: 56 DEFIEYMVKSIVYN-----NDGLIVVNKPYGVPIYKHNVQANENKSTVTQTVLSSSQVECPYVLEDALEALKSHLQYTDLKIVKSAERYMSGIVLLAATEKVAQKIRKAITSSKTRKQPFMNYWAITKGYP----DPAILEER---VGIKLIEVGQESNKQPIIVKKF-SKKEVLNTKVRPVNVEFRTICINKPLS------SCLLEITTSSVKWHFLRVYLANKVSCVLGDTLYSSRVRQILG 280
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. nr
Match: gi|1325259421|ref|XP_023327804.1| (mitochondrial mRNA pseudouridine synthase RPUSD3-like [Eurytemora affinis]) HSP 1 Score: 92.8189 bits (229), Expect = 1.252e-17 Identity = 71/263 (27.00%), Postives = 133/263 (50.57%), Query Frame = 0 Query: 24 PRALASDASHRHHPEKSSKMNIVQELAQVGRFRTLDDLVEHLASNVLYHEPDKASDGLVAINKPHGLPRYQTDNCPVSLEKALPALAKMLEVKTLLPIKMPERHCSGVCLMAKSEESKARITKILAGVKHDTRLIDNYWVLTNGFPRFIENLEVFDQ-SLHLVGVRAMEK---GQKHVEPILSRVLMSDSATARIKKRKGDVPNRIR-VHSKTLARSGLGKAALVSVQPTKTSNNFIFVYMNDLLSPIIGDHLYSYRCRVTMG 281 P A S + PE+ K + + +++ ++T + L++ L ++Y D L+A+NKP+GL + T + P S+E L L+ LEV++L + +R+CSG+ L++ + ++ ++ I ++ L + + G NL++ D ++ L ++E + H EP++ S + R K+ K D RIR + K L RS + L+++ P+ T N+ I V++ + P++GD LY YR R +G Sbjct: 24 PNAQGSIKNLEFSPEEK-KASFINIYSRLNSWKTRELLIDELVKGIVYIGED-----LIAVNKPYGLANHATKDSPYSVEDCLKQLSDRLEVESLHLLSTVDRYCSGITLLSPTMKTMDKMKIIRTRIRTARHLNSGFLGVVTGH----ANLDLQDTFTIRLQEYPSVENPLFSKVHKEPVI-----SSGPSTRGKRSKKD--ERIRHLSVKCLNRSNMVPLTLINICPSSTKNHLIRVWLAERGHPLLGDGLYDYRSRSVLG 269
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. nr
Match: gi|1022763714|gb|KZS09265.1| (RNA pseudouridylate synthase domain-containing protein 4 [Daphnia magna]) HSP 1 Score: 91.2781 bits (225), Expect = 3.523e-17 Identity = 73/227 (32.16%), Postives = 112/227 (49.34%), Query Frame = 0 Query: 61 LVEHLASNVLYHEPDKASDGLVAINKPHGLPRYQT------DNCPVSLEKALPALAKMLEVKTLLPIKMPERHCSGVCLMAKSEESKARITKILAGVKHDTRLIDNYWVLTNGFPRFIENLEVFDQSLHLVGVRAMEKGQKHVEPILSRVLMSDSATARIKKRKGDVPNRIRVHSKTLARSGLGKAALVSVQPTKTSNNFIFVYMNDLLSPIIGDHLYSYRCRVTMG 281 V+HLA NV+Y++ DGL+AINKP+G+P + + S+E+AL LA +L V+ LLP KM E+ SGV L A E+ +I + K Y +T G P+ S VG+ E + +E L +M D + +K + RV+ KTL+R G +LV + + +F+ VY+ L SP++GDH++ R + MG Sbjct: 64 FVDHLAENVIYNK-----DGLIAINKPYGVPLLKDGLIKGPNEMMFSIEEALTPLASLLNVEKLLPAKMVEKFASGVSLFASQEKMVDKIRQSYITNKAKKIHTFKYLAVTIGEPK-------PSSSRGTVGMGFFE--HQGIEGKL-LAIMKDYSN---RKVADGLVREFRVNYKTLSR-GDEPCSLVEIDVSSAKKHFLRVYLAHLFSPVLGDHIFGNRVQEIMG 271
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. nr
Match: gi|1227988697|ref|XP_021926054.1| (RNA pseudouridylate synthase domain-containing protein 3-like isoform X1 [Zootermopsis nevadensis] >gi|646710683|gb|KDR16129.1| RNA pseudouridylate synthase domain-containing protein 3 [Zootermopsis nevadensis]) HSP 1 Score: 89.3521 bits (220), Expect = 2.575e-16 Identity = 75/269 (27.88%), Postives = 126/269 (46.84%), Query Frame = 0 Query: 55 FRTLDDLVEHLASNVLYHEPDKASDGLVAINKPHGL-----PRYQTDNC-----------PVSLEKALPALAKMLEVKTLLPIKMPERHCSGVCLMAKSEESKARITKILAGVKHDTRLIDNYWVLTNGFPRFIENLEVFDQSLHLVGVRAMEKGQKHVEPILSR----VLMSDSATARIKKRKGDVPNRIRVHSKTLARSGLGKAALVSVQPTKTSNNFIFVYMNDLLSPIIGDHLYSYRCRVTMGVMSRIN----YSQAPTNIPTQV 299 +R+L + L SN++Y++ D L+ +NKP+G+ P T + L +ALP +A L +L +K PER+ SGV +++ E+ ++ K + +L +YW + G P+ D + +G+ E P +S V+M + +K+ GDV RV TL R A+LV + P+ T +F+ VY+ LLSP++GD++Y R MGV IN ++ P N+P ++ Sbjct: 74 WRSLKQFSDSLTSNIIYNK-----DDLIVLNKPYGIGFSPPPEMATQHSRRRGNILVGQKQYYLTEALPHIAGNLGYNSLTVLKKPERYTSGVTVLSSCEKVLEKVKKCIKKASGRQQLCAHYWAVVIGNPQP-------DSAFLKLGLTLKE------NPCISNDKQPVVMQKWSNKAVKQ--GDV-KVFRVEHHTLYRQNF--ASLVEICPSATKWHFLRVYLAHLLSPVLGDNMYGSRVHQVMGVPLAINPCSDAARGPKNLPQKL 319
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. nr
Match: gi|1339090348|ref|XP_023706337.1| (mitochondrial mRNA pseudouridine synthase RPUSD3-like [Cryptotermes secundus] >gi|1330917177|gb|PNF34885.1| hypothetical protein B7P43_G01411 [Cryptotermes secundus]) HSP 1 Score: 88.9669 bits (219), Expect = 2.957e-16 Identity = 74/267 (27.72%), Postives = 128/267 (47.94%), Query Frame = 0 Query: 55 FRTLDDLVEHLASNVLYHEPDKASDGLVAINKPHGL-------PRYQ----TDNCPVS-----LEKALPALAKMLEVKTLLPIKMPERHCSGVCLMAKSEESKARITKILAGVKHDTRLIDNYWVLTNGFPRFIENLEVFDQSLHLVGVRAMEKG--QKHVEPILSRVLMSDSATARIKKRKGDVPNRIRVHSKTLARSGLGKAALVSVQPTKTSNNFIFVYMNDLLSPIIGDHLYSYRCRVTMGVMSRIN----YSQAPTNIPTQV 299 +R+L + L SNV+Y++ DGL+ +NKP+G+ P Q TD V L +ALP +A L +L +K+PER+ SGV +++ + ++ + + YW + G P+ D ++ +G+ E +PI+ R ++ ++GDV +VH TL ++ L A+LV + P+ T +F+ VY+ L+SP++GD+LY R MGV IN ++ P +P ++ Sbjct: 41 WRSLKHFSDFLTSNVIYNK-----DGLLVLNKPYGIGLSPSPTPSAQHSRHTDKMIVGQSQYYLTEALPHIAGNLGYNSLTVLKIPERYTSGVTVLSSCNKVMDKVRTCMKKASGRLQSCAYYWAVVIGNPQT-------DSAIQKLGLTFKENPTIDNDKQPIVVRDWSKNAM------KRGDV-KVFKVHHHTLCKNNL--ASLVEICPSATKWHFLRVYLAHLMSPVLGDNLYGSRVHQVMGVHLAINPTSDAARGPKKLPKEL 286
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. nr
Match: gi|1228363682|ref|XP_021968459.1| (RNA pseudouridylate synthase domain-containing protein 3-like [Folsomia candida] >gi|1215276475|gb|OXA62784.1| RNA pseudouridylate synthase domain-containing protein 3 [Folsomia candida]) HSP 1 Score: 88.1965 bits (217), Expect = 6.570e-16 Identity = 88/315 (27.94%), Postives = 142/315 (45.08%), Query Frame = 0 Query: 13 PSW--HNQWRPMLPRALAS--DASHRHH-----PEKSSKMNIVQELAQVGRFRTLDDLVEHLASNVLYHEPDKASDGLVAINKPHGLPRYQT-------------------DNCPVSLEKALPALAKMLEVKTLLPIKMPERHCSGVCLMAK------SEESKARITKILAGVKHDTRLIDNYWVLTNGFPRFIENLEVFDQSLHLVGVRAMEKGQKHV-EPILSRVLMSDSATARIKKRKGDVPNRIRVHSKTLARSGLGKAALVSVQPTKTSNNFIFVYMNDLLSPIIGDHLYSYRCRVTMGVMSRINYSQAP 292 P+W +N + L + S +AS HH + S + + +++ + V+HL +++ A DGLV INKP G+ + D +LE ALP L L L+ +K ER SG+ + A + K R +K+L+ +T+ + NY V+T G P N F + VGV+ +V +P + R +S KRK P + ++ +A+ G K AL+ + + NF+ +Y +DLL PI+GDHLYS R + MGV ++++ S AP Sbjct: 27 PNWRSYNVFNNYLRTSATSSVNASQGHHQIIITDQTKSDGEFIHPYKSIFPWKSKPEFVQHLVQQIVH-----ADDGLVVINKPFGVGVINSKAKHKGQIKQVEYSHLRGIDLTDYNLEIALPHLRIALSKPDLVLVKSTERMTSGLAVFADNLRHADTFRRKLRNSKMLS----NTKPLYNYLVITAGTP--FSNQTTFHER---VGVQLKSALLSNVMQPCIERQFSRNSV-----KRKDVKPVNVTIN---VAKYGDHKTALLEIGTSSVKWNFLRIYCSDLLIPILGDHLYSCRVQSIMGVPTKMDISHAP 319
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. nr
Match: gi|321467115|gb|EFX78106.1| (hypothetical protein DAPPUDRAFT_225451 [Daphnia pulex]) HSP 1 Score: 83.9593 bits (206), Expect = 1.217e-14 Identity = 75/244 (30.74%), Postives = 115/244 (47.13%), Query Frame = 0 Query: 55 FRTLDDLVEHLASNVLYHEPDKASDGLVAINKPHGLPRYQT------DNCPVSLEKALPALAKMLEVKTLLPIKMPERHCSGVCLM-AKSEESKARITKILAGVKHDTRLIDNYWVLTNGFPRFIENLEVFDQSLHLVGVRAMEKGQKHVEPILSRVLMSDSATARIKKRKGDVPNRIRVHSKTLARSGLGKAALVSVQPTKTSNNFIFVYMNDLLSPIIGDHLYSYRCRVTMGVMSRINYSQA 291 ++T + V+H+A+NV+Y++ DGLVAINKP G+P ++ + S+++ L LA L V+ LLP K ER SG+ L + E+ +I + K Y V+T G P+ E S VG+ E L+R L KK ++ +V KTL+ G G +LV + + N+F+ VY L SPI+GDH++ R + G I+ QA Sbjct: 51 WKTKEQFVDHIAANVIYNK-----DGLVAINKPFGVPLMKSGLTTGHNESLFSIDEVLIPLASKLNVEKLLPAKSVERFASGISLFTCQDEKVVDKIRQCYNTNKLRKIHTFKYLVVTIGEPKPSE-------SKRTVGMGLFEHKD------LTRKLPVIMKEYSKKKVAENLVQEYKVSYKTLSH-GDGPCSLVEIDVSSVKNHFLRVYFAHLFSPILGDHIFGNRVQEIKGKRLTISPVQA 275
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. nr
Match: gi|755941302|ref|XP_011298397.1| (PREDICTED: RNA pseudouridylate synthase domain-containing protein 3-like [Fopius arisanus]) HSP 1 Score: 81.6481 bits (200), Expect = 9.640e-14 Identity = 73/250 (29.20%), Postives = 119/250 (47.60%), Query Frame = 0 Query: 63 EHLASNVLYHEPDKASDGLVAINKPHGLP-------RYQTDNCP--------VSLEKALPALAKMLEVKTLLPIKMPERHCSGVCLMAKSEESKARITKILAGVKHDTRLIDNYWVLTNGFPRFIENLEVFDQSLHLVGVRAMEKGQKHVEPILSRVLMSDSATARIKKRKGDVPNRIRVHSKTLARSGLGKAALVSVQPTKTSNNFIFVYMND-LLSPIIGDHLYSYRCRVTMGVMSRINYSQAPTNIP 296 E L ++VLY+E DGLVAINKP+G+ Q + P ++ ALP +A L K+L IK PE+ SGV L+ S + K + K + + L +W +T P+ +E +L+ V K +K PI ++ + SA AR +GD+ + V K L+ A+LV ++ + T + + ++ LLSPI+GD++Y R + +G +N + +IP Sbjct: 62 ESLINSVLYNE-----DGLVAINKPYGISSRTPKPNEIQVNKLPSGIPNAVDYTVADALPVIADRLGYKSLTIIKTPEKFTSGVVLLGASPQIKTAVEKSMRIAEGARILPRTFWAVTRQVPKQLEGESRVAMTLNRV------KERKRPVPI---IINTWSANAR---ERGDI-KILNVQYKVLSHGTYNVASLVEIKSSTTVWHAVRLFAATVLLSPILGDNIYGSRVQNVLGKRLLVNVAVDAAHIP 293
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. nr
Match: gi|291221038|ref|XP_002730528.1| (PREDICTED: RNA pseudouridylate synthase domain-containing protein 3-like [Saccoglossus kowalevskii]) HSP 1 Score: 80.4925 bits (197), Expect = 2.784e-13 Identity = 68/239 (28.45%), Postives = 110/239 (46.03%), Query Frame = 0 Query: 59 DDLVEHLASNVLYHEPDKASDGLVAINKPHGLPRY------QTDNCPVSLEKALPALAKMLEVKTLLPIKMPERHCSGVCLMAKSEESKARITKILAGVKHDTRLIDNYWVLTNGFPRFIENLEVFDQSLHLVGVRAMEKGQKHVEPILSRVLMSDSATARIKKRKGDVPNRIRVHSKTLARSGLGKAALVSVQPTKTSNNFIFVYMNDLLSPIIGDHLYSYRCRVTMGVMSRINYSQA 291 + LV++L S ++Y E DG++A+NKP GL + T + SL + LP L + K L +K PE+ CSGV L+AK+ E A I + L + +W +T G P + L + + + + V P+ DS+ KR + N ++ +K S + ALV + P K + + V+M L I+GDH+YS R + +G+ I+ A Sbjct: 84 EQLVQYLKSQIVYDE-----DGVLALNKPAGLGVHSQREDLDTADHQWSLLEVLPDLKHQIGEKHLQFVKAPEKDCSGVTLLAKTPEIAADIDRSLKEARLRQVFTRVFWAVTVGVPSPLSGL------IKVPVTNEVVDDEHQVSPV------KDSS-----KRSYKMRNTRKLLTKYRVISESNQCALVELMPLKAYKDQLRVHMTTKLCRILGDHVYSSRIQTILGIPVLIDARNA 300
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. nr
Match: gi|817209139|ref|XP_012280610.1| (mitochondrial RNA pseudouridine synthase rpusd4-like [Orussus abietinus]) HSP 1 Score: 80.4925 bits (197), Expect = 2.881e-13 Identity = 60/250 (24.00%), Postives = 117/250 (46.80%), Query Frame = 0 Query: 55 FRTLDDLVEHLASNVLYHEPDKASDGLVAINKPHGLPRYQTDN-----------------CPVSLEKALPALAKMLEVKTLLPIKMPERHCSGVCLMAKSEESKARITKILAGVKHDTRLIDNYWVLTNGFPRFIENLEVFDQSLHLVGVRAMEKGQKHVEPILSRVLMSDSATARIKKRKGDVPNRIRVHSKTLARSGLGKAALVSVQPTKTSNNFIFVYMNDLL-SPIIGDHLYSYRCRVTMGVMSRI 286 ++++D L +V+Y++ DGL+AINKP+G+ N +L A+P +AK L ++L IK ER+ +G+ L+A+SE+ + + K + + YWV+T PR ++ + +L R + Q EP++ + ++++G+V N + K ++ S L +L+ ++ + + + ++ + +L SPI+GD +Y R + MG I Sbjct: 53 WKSVDQFSNELVCDVIYNK-----DGLIAINKPYGISGKNNTNINGNGADKKIIPHIPNAVDYTLSDAIPYIAKTLGYQSLKLIKSLERYTAGIILLAESEKVENAVIKSFNRAQGFGIIPKTYWVVTTKLPREVKGIYRLGLTLQQSPCRTFK--QAVFEPVI----------GKNREKRGEV-NIFKADFKLISNSTLNLCSLIEIKASPAKWHSVRLFSSTILYSPILGDQIYGSRVQNVMGTWVNI 284 The following BLAST results are available for this feature:
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 2
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 4
BLAST of rna pseudouridylate synthase domain-containing protein 3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold384_size188899:151441..153270- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold384_size188899-snap-gene-0.31 ID=maker-scaffold384_size188899-snap-gene-0.31|Name=rna pseudouridylate synthase domain-containing protein 3|organism=Tigriopus kingsejongensis|type=gene|length=1830bp|location=Sequence derived from alignment at scaffold384_size188899:151441..153270- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'rna pseudouridylate synthase domain-containing protein 3' has the following synonyms
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