39s ribosomal protein mitochondrial, maker-scaffold395_size185061-snap-gene-0.36 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Match: EMLSAG00000003794 (supercontig:LSalAtl2s:LSalAtl2s205:263075:279463:1 gene:EMLSAG00000003794 transcript:EMLSAT00000003794 description:"maker-LSalAtl2s205-augustus-gene-2.8") HSP 1 Score: 114.39 bits (285), Expect = 7.630e-32 Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = 0 Query: 133 VDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGNRANLSVDF 279 VD SMENLEEVVRER RAYWELEVGE+GE+ER + +F +E EY EH +P+E+NEE++ + ++ + F E + +KK+R+MR LRR+PNV++ LQEK+P +E +KR+ G+ N D Sbjct: 12 VDDSMENLEEVVRERXRAYWELEVGETGERER-IKRIGSFGIEVEYNPIEHNLPYEVNEEYKNTLRLKYSCNYGPEVTEFLEHYHEVLVKKESKKKHREMRICLETLRRYPNVEDHVLQEKFPLIDIELIKRWNKIKGHHDNAQWDV 157
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|212276461|sp|Q9HD33.2|RM47_HUMAN (RecName: Full=39S ribosomal protein L47, mitochondrial; Short=L47mt; Short=MRP-L47; AltName: Full=Mitochondrial large ribosomal subunit protein uL29m; AltName: Full=Nasopharyngeal carcinoma metastasis-related protein 1; Flags: Precursor) HSP 1 Score: 111.309 bits (277), Expect = 3.685e-28 Identity = 72/199 (36.18%), Postives = 114/199 (57.29%), Query Frame = 0 Query: 53 FHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGE----SGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDE 247 H++ R + EFF+ NWG+ KV G +W +LR + NE+LHKLWYVLLKERN LLTLE K++ LPMP+ ERLDKV SM+ L++VV+ER A L+ G+ G R + + ++++ +P+ LN+ + ++RF+ D F R RE+ + +K+ + + +L++FP++ E Sbjct: 55 LHTTLSRKGLEEFFDDPKNWGQEKVKSGAAWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQRLPMPSPERLDKVVDSMDALDKVVQEREDALRLLQTGQERARPGAWRRDIFGRIIWHKFKQWV-----IPWHLNKRYN---RKRFFALPYVDH--FLRLEREKRARIKARKENLERKKAKILLKKFPHLAE 243
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|83305636|sp|Q8K2Y7.2|RM47_MOUSE (RecName: Full=39S ribosomal protein L47, mitochondrial; Short=L47mt; Short=MRP-L47; Flags: Precursor) HSP 1 Score: 106.686 bits (265), Expect = 2.032e-26 Identity = 70/197 (35.53%), Postives = 114/197 (57.87%), Query Frame = 0 Query: 53 FHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLR-RFPNVDEE 248 H++ R + EFF+ NWG+ KV G SW +LR + NE+LHKLWYVLLKERN LLTLE K++ LPMP+ ERL+KV SM+N+++VV+ER A L+ G+ + D F + ++ +P+ LN+ + ++RF+ D + R+R + + ++ +K + ++L +FP++ +E Sbjct: 57 LHTTLSRKGLEEFFDDPKNWGEEKVKSGASWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQRLPMPSPERLEKVVDSMDNVDKVVQEREDALRLLQTGQEKPRPGAWRRD-IFGRIVWHKFKQWPIPWYLNKRYN---RRRFFAMPYVDR---FIRLRIEKHARIEARKRSLQKKKEKILHAKFPHLSQE 246
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|122132362|sp|Q08DT6.1|RM47_BOVIN (RecName: Full=39S ribosomal protein L47, mitochondrial; Short=L47mt; Short=MRP-L47; Flags: Precursor) HSP 1 Score: 102.834 bits (255), Expect = 6.133e-25 Identity = 54/106 (50.94%), Postives = 72/106 (67.92%), Query Frame = 0 Query: 53 FHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGE 158 ++ R + EFF+ NWG+ KV G SW +LR + NE+LHKLWYVLLKERN LLTLE K++ LPMP+ ERL+KV SM+ L++VV+ER A L+ G+ Sbjct: 57 LQTTLSRRGLEEFFDDPKNWGEEKVKSGASWTCQQLRNKSNEDLHKLWYVLLKERNMLLTLEQEAKRQRLPMPSPERLEKVVDSMDALDKVVQEREDALRLLQTGQ 162
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|74583169|sp|P87232.1|RM04_SCHPO (RecName: Full=54S ribosomal protein L4, mitochondrial; Flags: Precursor) HSP 1 Score: 52.373 bits (124), Expect = 2.237e-7 Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 0 Query: 80 GRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCK--QEVLPMPNEERLDKVDISMENLEEVVRERNRAY 151 GR+W +ELR + +LH LWY L+E+N L T K Q +P + ER+ V+ +M ++ V+ ER RAY Sbjct: 58 GRAWAAEELRWKSFNDLHGLWYNCLREKNLLFTQRAEMKRLQLTIPKASNERVLAVNKTMAAIKFVLWERQRAY 131
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|817085838|ref|XP_012265622.1| (39S ribosomal protein L47, mitochondrial isoform X1 [Athalia rosae]) HSP 1 Score: 193.356 bits (490), Expect = 5.422e-57 Identity = 114/269 (42.38%), Postives = 158/269 (58.74%), Query Frame = 0 Query: 8 QAPSFTSDSLGGFTLDRSMCSATQIGLR---RDPSRKARMLWPVAQSWFHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGNRA 273 +A + S FTL ++ S T R R P+ + + FH++ +R DIMEFF+ NWG+ KV VGR+W KDELRL+ NE+LHKLW+VLLKERN LLT+EH K+E PN ER DKVD SMENLEEVVRERNRAY LE G+ GE+ +V+ S + Y EH +P +N RE YK + R F RE+ +Q ++ R+ +++RFPN+D EA+++ YPN ++E + + + G+ A Sbjct: 12 KAVNNVSKLFTNFTLSSNVISTTASVTRLTTRIPT------CAMQTACFHTTLRRNDIMEFFDDPKNWGETKVKVGRAWKKDELRLKSNEDLHKLWFVLLKERNMLLTMEHAAKEEHEIFPNPERKDKVDESMENLEEVVRERNRAYHLLETGQDGERSGKVV-TSQLGLRYYYRFSEHKIPKFMNSGWRERYK---FGSHGHAVRKFLTLYREKLWQTKRKAMVRERNHVMHLIKRFPNMDPEAIKKHYPNVNLENLAQKSKSRGHYA 270
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|759077741|ref|XP_011348647.1| (PREDICTED: 39S ribosomal protein L47, mitochondrial [Ooceraea biroi]) HSP 1 Score: 190.66 bits (483), Expect = 4.517e-56 Identity = 110/268 (41.04%), Postives = 163/268 (60.82%), Query Frame = 0 Query: 7 FQAPSFTSDSLGGFTLDRS-MCSATQIGLRRDPSRKARMLWPVAQSWFHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGNRA 273 F++ + ++ L +L +S + S + LR P+ + ++ H + +R D+MEFF+ +W KN+V VGRSW + ELRL+ N +LHKLWYVLLKERN L+T+E CKQ PN ERLDKV+ISM+NLE VVRERN AY LE GE+GE+ +++ + M+ Y EH +P +N+ R K+ + + R F RE+ + + ++ + R+ R A +LRRFPNVD EAL+E++PN ++ K K A G+ A Sbjct: 11 FRSVNNITNLLKTLSLSQSAIISPKHVFLRSTPA--------LHCAFLHITSERYDLMEFFDDPKHWAKNEVRVGRSWRRVELRLKSNTDLHKLWYVLLKERNMLMTMEEACKQANEIFPNPERLDKVEISMKNLERVVRERNTAYHMLETGETGERPGKLVYNR-IGMKYFYRMTEHPIPIFMNKSWR---KKNLFGFKERSVRKFLGFYREKLWNEKRKARNREKRRVAVILRRFPNVDLEALKEQFPNVDIKAAKASKVARGHYA 266
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|817085840|ref|XP_012265623.1| (39S ribosomal protein L47, mitochondrial isoform X2 [Athalia rosae]) HSP 1 Score: 188.348 bits (477), Expect = 9.377e-56 Identity = 104/221 (47.06%), Postives = 141/221 (63.80%), Query Frame = 0 Query: 53 FHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGNRA 273 FH++ +R DIMEFF+ NWG+ KV VGR+W KDELRL+ NE+LHKLW+VLLKERN LLT+EH K+E PN ER DKVD SMENLEEVVRERNRAY LE G+ GE+ +V+ S + Y EH +P +N RE YK + R F RE+ +Q ++ R+ +++RFPN+D EA+++ YPN ++E + + + G+ A Sbjct: 6 FHTTLRRNDIMEFFDDPKNWGETKVKVGRAWKKDELRLKSNEDLHKLWFVLLKERNMLLTMEHAAKEEHEIFPNPERKDKVDESMENLEEVVRERNRAYHLLETGQDGERSGKVV-TSQLGLRYYYRFSEHKIPKFMNSGWRERYK---FGSHGHAVRKFLTLYREKLWQTKRKAMVRERNHVMHLIKRFPNMDPEAIKKHYPNVNLENLAQKSKSRGHYA 222
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1009426726|gb|KYN44804.1| (39S ribosomal protein L47, mitochondrial [Trachymyrmex septentrionalis]) HSP 1 Score: 188.348 bits (477), Expect = 4.613e-55 Identity = 98/221 (44.34%), Postives = 140/221 (63.35%), Query Frame = 0 Query: 51 SWFHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGN 271 ++ H + +RCD+MEFF+ NWGKN + VGRSW KDELRL+ N +LHKLW+VLLKERN L+T+E C V PN ERLDKV SM NLE VVRERNRAY LE GE+GE+ + + + + Y ++++P +N YK + +R F R REQ + ++ + R+ A ++R+FPN+D EA++E++P+ VE++K K A G+ Sbjct: 48 AFIHLTSERCDLMEFFDDPKNWGKNGIRVGRSWKKDELRLKSNSDLHKLWFVLLKERNMLMTMEEACNNAVEIFPNPERLDKVQDSMSNLESVVRERNRAYHLLETGETGERPGKFVYNC-LGIRFYYQMGQYSIPKFINT---RWYKTHLFGFGGYATRKFLRLYREQLWNKKRKARTRNKNHVAMLIRKFPNLDLEAVKEQFPDVDVEKIKTSKKARGH 264
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|936560234|ref|XP_014207371.1| (39S ribosomal protein L47, mitochondrial [Copidosoma floridanum]) HSP 1 Score: 187.578 bits (475), Expect = 9.527e-55 Identity = 92/215 (42.79%), Postives = 144/215 (66.98%), Query Frame = 0 Query: 51 SWFHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDS-RVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKR 264 + H+S + D+MEFF+K+ NW K ++ VGRSW DELR++ NE+LHKLWYVLLKE+N LLT+EH C + PN ERLDKV+ SM+NLE VVRERN AY++LE G++GE +++ ++ + + Y +H +P +N + +K+++ G + R F + RE + + +++ R+ +L++FPN+D EAL++KYPNA++E+ R Sbjct: 48 ALIHTSSRTDDLMEFFDKDINWTKQRIQVGRSWSTDELRIKSNEDLHKLWYVLLKEKNMLLTMEHACNEAYELFPNPERLDKVEESMKNLETVVRERNEAYYQLETGQTGEVPSKIV-NNVLGLRQYYRFSQHVIPKGIN----QTWKKKYLFGYGGHAVRKFLLKYRENIWNEKRKRNNRETNAAISLLKKFPNLDMEALRQKYPNANIEKALR 257
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1070132730|ref|XP_018343394.1| (PREDICTED: 39S ribosomal protein L47, mitochondrial isoform X2 [Trachymyrmex septentrionalis] >gi|1070132732|ref|XP_018343401.1| PREDICTED: 39S ribosomal protein L47, mitochondrial isoform X2 [Trachymyrmex septentrionalis] >gi|1070132734|ref|XP_018343408.1| PREDICTED: 39S ribosomal protein L47, mitochondrial isoform X2 [Trachymyrmex septentrionalis]) HSP 1 Score: 188.734 bits (478), Expect = 1.038e-54 Identity = 98/221 (44.34%), Postives = 140/221 (63.35%), Query Frame = 0 Query: 51 SWFHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGN 271 ++ H + +RCD+MEFF+ NWGKN + VGRSW KDELRL+ N +LHKLW+VLLKERN L+T+E C V PN ERLDKV SM NLE VVRERNRAY LE GE+GE+ + + + + Y ++++P +N YK + +R F R REQ + ++ + R+ A ++R+FPN+D EA++E++P+ VE++K K A G+ Sbjct: 97 AFIHLTSERCDLMEFFDDPKNWGKNGIRVGRSWKKDELRLKSNSDLHKLWFVLLKERNMLMTMEEACNNAVEIFPNPERLDKVQDSMSNLESVVRERNRAYHLLETGETGERPGKFVYN-CLGIRFYYQMGQYSIPKFINT---RWYKTHLFGFGGYATRKFLRLYREQLWNKKRKARTRNKNHVAMLIRKFPNLDLEAVKEQFPDVDVEKIKTSKKARGH 313
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1009372321|gb|KYM96446.1| (39S ribosomal protein L47, mitochondrial [Cyphomyrmex costatus]) HSP 1 Score: 187.193 bits (474), Expect = 1.045e-54 Identity = 105/260 (40.38%), Postives = 154/260 (59.23%), Query Frame = 0 Query: 13 TSDSLGGFTLDRSMCSATQIGLRRDPSRKARMLWPVAQSWF-HSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGN 271 T S+ G T + S T + P R P F H + +R D+MEFF+ NWGKN++ VGRSW KDELRL+ N +LHKLW+VLLKERN L+T+E CK PN ERLDKV SM NLE +VRERNRAY LE GE+GE+ +++ + + Y +H++P +N + YK + +R F R RE+ + + ++ + R+ A ++R+FPN+D EA++E++P+ +E+ K K A+G+ Sbjct: 10 TRTSINGITKLFTNLSLTPPSVIESPKRAFLRSTPALHCAFIHFTSERRDLMEFFDDPKNWGKNEIRVGRSWKKDELRLKSNSDLHKLWFVLLKERNMLMTMEEACKDANEIFPNPERLDKVQDSMSNLESIVRERNRAYHLLETGETGERPGKLVYNC-LGLRFYYQMGQHSIPKFVNT---KWYKTHMFGYGGYATRKFLRLYREKLWNNKRRARTRNKNHVAMLIRKFPNLDLEAVKEQFPDVDIEKTKASKRAIGH 265
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1070609195|ref|XP_018402366.1| (PREDICTED: 39S ribosomal protein L47, mitochondrial [Cyphomyrmex costatus]) HSP 1 Score: 187.578 bits (475), Expect = 1.167e-54 Identity = 105/260 (40.38%), Postives = 154/260 (59.23%), Query Frame = 0 Query: 13 TSDSLGGFTLDRSMCSATQIGLRRDPSRKARMLWPVAQSWF-HSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGN 271 T S+ G T + S T + P R P F H + +R D+MEFF+ NWGKN++ VGRSW KDELRL+ N +LHKLW+VLLKERN L+T+E CK PN ERLDKV SM NLE +VRERNRAY LE GE+GE+ +++ + + Y +H++P +N + YK + +R F R RE+ + + ++ + R+ A ++R+FPN+D EA++E++P+ +E+ K K A+G+ Sbjct: 19 TRTSINGITKLFTNLSLTPPSVIESPKRAFLRSTPALHCAFIHFTSERRDLMEFFDDPKNWGKNEIRVGRSWKKDELRLKSNSDLHKLWFVLLKERNMLMTMEEACKDANEIFPNPERLDKVQDSMSNLESIVRERNRAYHLLETGETGERPGKLVYNC-LGLRFYYQMGQHSIPKFVNT---KWYKTHMFGYGGYATRKFLRLYREKLWNNKRRARTRNKNHVAMLIRKFPNLDLEAVKEQFPDVDIEKTKASKRAIGH 274
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1070132728|ref|XP_018343384.1| (PREDICTED: 39S ribosomal protein L47, mitochondrial isoform X1 [Trachymyrmex septentrionalis]) HSP 1 Score: 189.119 bits (479), Expect = 1.294e-54 Identity = 98/221 (44.34%), Postives = 140/221 (63.35%), Query Frame = 0 Query: 51 SWFHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGN 271 ++ H + +RCD+MEFF+ NWGKN + VGRSW KDELRL+ N +LHKLW+VLLKERN L+T+E C V PN ERLDKV SM NLE VVRERNRAY LE GE+GE+ + + + + Y ++++P +N YK + +R F R REQ + ++ + R+ A ++R+FPN+D EA++E++P+ VE++K K A G+ Sbjct: 115 AFIHLTSERCDLMEFFDDPKNWGKNGIRVGRSWKKDELRLKSNSDLHKLWFVLLKERNMLMTMEEACNNAVEIFPNPERLDKVQDSMSNLESVVRERNRAYHLLETGETGERPGKFVYN-CLGIRFYYQMGQYSIPKFINT---RWYKTHLFGFGGYATRKFLRLYREQLWNKKRKARTRNKNHVAMLIRKFPNLDLEAVKEQFPDVDVEKIKTSKKARGH 331
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1227977995|ref|XP_021920542.1| (39S ribosomal protein L47, mitochondrial [Zootermopsis nevadensis] >gi|646715565|gb|KDR19128.1| 39S ribosomal protein L47, mitochondrial [Zootermopsis nevadensis]) HSP 1 Score: 185.652 bits (470), Expect = 3.678e-54 Identity = 100/262 (38.17%), Postives = 163/262 (62.21%), Query Frame = 0 Query: 14 SDSLGGFTLDRSMCSATQIGLRRDPSRKARMLWPVAQSWFHSSPQRCDIMEFFEKEDNWGKNKVYVGRSWLKDELRLRGNEELHKLWYVLLKERNRLLTLEHLCKQEVLPMPNEERLDKVDISMENLEEVVRERNRAYWELEVGESGEQERQVLEDSTFAMEEEYITQEHTVPFELNEEHREMYKQRFWTGLDDDSRVFYRRMREQAYQDMKQKKYRDMRDGARVLRRFPNVDEEALQEKYPNASVEEMKRYKDALGNRANL 275 S +L S S I + R + ++ P S FH++ + D+MEFF+ ++NW KN+V VGRSW KDELR++ N +LHKLW+VLLKE+N LLT+EH K+++ PN ER+DKV+ SM+NLE+VVRERN AY++LE G++GE+ V + + + EH +P +N+E ++ +K T D + F RE+ + + ++ + R+ +++RFPN+D EA++E++P+ +E+++ K G+R N+ Sbjct: 8 SKTLNSMFKSFSSLSVMNISKTKCVPRTSSVVCPC--SCFHATSVKQDLMEFFDDKNNWAKNEVKVGRSWKKDELRIKSNSDLHKLWFVLLKEKNMLLTMEHESKEQIQLFPNPERIDKVEESMKNLEDVVRERNEAYFKLETGQTGERPVCV-RTGSLGLRYNHRMAEHIIPQFMNKEWQQRHKSYAHT---RDVKNFITLYREKKFLEKRKARNRERNHVIGLMKRFPNLDFEAVKEQFPSVDIEKIRYQKKTRGHRENI 263 The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 4
BLAST of 39s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold395_size185061:60422..68608- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold395_size185061-snap-gene-0.36 ID=maker-scaffold395_size185061-snap-gene-0.36|Name=39s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=8187bp|location=Sequence derived from alignment at scaffold395_size185061:60422..68608- (Tigriopus kingsejongensis)back to top Synonyms
The feature '39s ribosomal protein mitochondrial' has the following synonyms
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