estrogen related nuclear partial, maker-scaffold421_size176100-snap-gene-0.27 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10") HSP 1 Score: 249.98 bits (637), Expect = 3.037e-82 Identity = 119/154 (77.27%), Postives = 132/154 (85.71%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE-SPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASGFHYGVSSCEACKAFFKRTIQGNIEYT PASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE SPY + P K +LE+NKLL L CEPE L D LP+ + +T++TLS+F++REL+GTI WAK Sbjct: 272 LVCGDIASGFHYGVSSCEACKAFFKRTIQGNIEYTXPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESSPY--IQPPPKKTLEDNKLLQVLRHCEPEAFLVNMDMTLPNYKIRTISTLSDFYNRELIGTIEWAK 423
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 112.079 bits (279), Expect = 6.669e-30 Identity = 54/107 (50.47%), Postives = 68/107 (63.55%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGLHPARKLSLEENKLLI 108 VCGD SG+HYG+ +CE+CK FFKRT+Q YTC A C I+K +RK C CRFQKCL +GM E VR DR+RGGR K+ M + ARKL + + +I Sbjct: 188 VCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEAVRHDRMRGGRNKFGPMYKRDR-----ARKLQVLRQRQVI 289
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 109.383 bits (272), Expect = 9.294e-29 Identity = 46/79 (58.23%), Postives = 56/79 (70.89%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGR 79 ++C D A+G HYG+ +CE CK FFKRT+Q YTC A ECEINK +R CQ CRFQKCL+ GM+ VR DR+ GGR Sbjct: 284 MICEDRATGLHYGIITCEGCKGFFKRTVQNKRIYTCVADGECEINKAQRNRCQYCRFQKCLQKGMVLAAVREDRMPGGR 362
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000004451 (supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1 gene:EMLSAG00000004451 transcript:EMLSAT00000004451 description:"snap_masked-LSalAtl2s231-processed-gene-9.18") HSP 1 Score: 106.301 bits (264), Expect = 7.633e-28 Identity = 47/92 (51.09%), Postives = 57/92 (61.96%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYGGL 93 VCGD SGFHYG+ SCE+CK FFKRT+Q Y C ++C + RK C ACRF KCL +GM E +R DR RGGR Y+ P G+ Sbjct: 157 VCGDKISGFHYGIFSCESCKGFFKRTVQNKKNYVCLRGSQCPVTISTRKKCPACRFDKCLNIGMKLEAIREDRTRGGRSTYQCSYNLPTTGV 248
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000013004 (supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1") HSP 1 Score: 102.449 bits (254), Expect = 2.269e-26 Identity = 46/78 (58.97%), Postives = 56/78 (71.79%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGR 79 VCGD A+ HYGV +CE CK FFKRT+Q N +Y C A C ++KRRR CQ CRFQKCL +GM+KE VR D ++G R Sbjct: 411 VCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRR 488
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 92.4337 bits (228), Expect = 5.272e-23 Identity = 41/76 (53.95%), Postives = 53/76 (69.74%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRG 77 +CGD ASG HYGV SCE CK FFKRT++ + Y C + +C I+KR+R CQ CR+ KCL GM +E V+ +R RG Sbjct: 93 ICGDRASGKHYGVYSCEGCKGFFKRTVRKELTYACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKREAVQEERHRG 168
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8") HSP 1 Score: 91.6633 bits (226), Expect = 1.454e-22 Identity = 37/65 (56.92%), Postives = 44/65 (67.69%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGM 65 +VCGD ASG HYG SCE CK FFKR+I+ + Y C + +CE+ K R CQ CR QKCL MGM Sbjct: 221 VVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGM 285
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11") HSP 1 Score: 90.5077 bits (223), Expect = 1.607e-22 Identity = 50/155 (32.26%), Postives = 75/155 (48.39%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRM--IESPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 +VCGD +SG HYG +CE CK+FFKR+++ N+ Y C S C +++ R CQ CR +KC +MGM +E V+ RV Q + P G + + + L R EP P +P + + + EF R L + W + Sbjct: 84 VVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMRREAVQRGRVPPTPQGVFGLGFSSDPLSG-------TTYLSSYISMLLRAEPYPTSRYGQMPMPTNGMIGIENICEFAARLLFSAVEWTR 231
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5") HSP 1 Score: 87.8113 bits (216), Expect = 2.790e-21 Identity = 35/74 (47.30%), Postives = 50/74 (67.57%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDR 74 +VCGD +SG HYG +CE CK+FFKR ++ ++ + C + C +++ R CQ CRF+KCL MGM KE V+ R Sbjct: 76 VVCGDKSSGKHYGQFTCEGCKSFFKRCVRRSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKEAVQKGR 149
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7") HSP 1 Score: 87.4261 bits (215), Expect = 4.279e-21 Identity = 37/81 (45.68%), Postives = 53/81 (65.43%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQK 81 +VCGD +SG HYG +CE CK+FFKR+++ + Y C S C I++ R CQ CR +KC++MGM KE V+ R+ +Q Sbjct: 435 VVCGDKSSGKHYGQFTCEGCKSFFKRSVRRALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGMRKEAVQRGRIPASQQN 515
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|62286747|sp|Q5RAM2.1|ERR3_PONAB (RecName: Full=Estrogen-related receptor gamma; AltName: Full=Estrogen receptor-related protein 3; AltName: Full=Nuclear receptor subfamily 3 group B member 3) HSP 1 Score: 221.476 bits (563), Expect = 1.825e-70 Identity = 107/159 (67.30%), Postives = 125/159 (78.62%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---SPYGG---LHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEY+CPA+NECEI KRRRK+CQACRF KCL++GMLKEGVRLDRVRGGRQKY+R I+ SPY + PA+K NK++ L EPE + A+PDP +PD K LTTL + DRELV IGWAK Sbjct: 106 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKK---PYNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAK 261
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|50400205|sp|P62510.1|ERR3_RAT (RecName: Full=Estrogen-related receptor gamma; AltName: Full=Estrogen receptor-related protein 3; AltName: Full=Nuclear receptor subfamily 3 group B member 3 >gi|50402102|sp|P62508.1|ERR3_HUMAN RecName: Full=Estrogen-related receptor gamma; AltName: Full=ERR gamma-2; AltName: Full=Estrogen receptor-related protein 3; AltName: Full=Nuclear receptor subfamily 3 group B member 3 >gi|50402103|sp|P62509.1|ERR3_MOUSE RecName: Full=Estrogen-related receptor gamma; AltName: Full=Estrogen receptor-related protein 3; AltName: Full=Nuclear receptor subfamily 3 group B member 3) HSP 1 Score: 221.09 bits (562), Expect = 4.080e-70 Identity = 107/159 (67.30%), Postives = 125/159 (78.62%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---SPYGG---LHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEY+CPA+NECEI KRRRK+CQACRF KCL++GMLKEGVRLDRVRGGRQKY+R I+ SPY + PA+K NK++ L EPE + A+PDP +PD K LTTL + DRELV IGWAK Sbjct: 129 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRIDAENSPYLNPQLVQPAKK---PYNKIVSHLLVAEPEKIYAMPDPTVPDSDIKALTTLCDLADRELVVIIGWAK 284
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|75063008|sp|Q6QMY5.1|ERR1_CANFA (RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1) HSP 1 Score: 213.386 bits (542), Expect = 1.785e-67 Identity = 107/164 (65.24%), Postives = 121/164 (73.78%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIES---PYGGLHPARKLSLE--------ENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASG+HYGV+SCEACKAFFKRTIQG+IEY+CPASNECEI KRRRKACQACRF KCLR+GMLKEGVRLDRVRGGRQKY+R E P+ G PA L++ N L+ L EPE L A+PDP PD + TL + FDRE+V TI WAK Sbjct: 80 LVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGSFPAGPLAVAGGPRKTAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAK 243
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|1209676900|sp|O95718.3|ERR2_HUMAN (RecName: Full=Steroid hormone receptor ERR2; AltName: Full=ERR beta-2; AltName: Full=Estrogen receptor-like 2; AltName: Full=Estrogen-related receptor beta; Short=ERR-beta; AltName: Full=Nuclear receptor subfamily 3 group B member 2) HSP 1 Score: 211.075 bits (536), Expect = 1.728e-66 Identity = 104/159 (65.41%), Postives = 123/159 (77.36%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---SPYGGLH---PARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEY+CPA+NECEI KRRRK+CQACRF KCL++GMLKEGVRLDRVRGGRQKY+R ++ SPY L PA+K K++ L EP+ L A+P P +P+ K LTTL + DRELV IGWAK Sbjct: 104 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSESSPYLSLQISPPAKK---PLTKIVSYLLVAEPDKLYAMPPPGMPEGDIKALTTLCDLADRELVVIIGWAK 259
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|215274146|sp|P11474.3|ERR1_HUMAN (RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen receptor-like 1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1) HSP 1 Score: 207.994 bits (528), Expect = 2.079e-65 Identity = 106/168 (63.10%), Postives = 119/168 (70.83%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---------------SPYGGLHPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASG+HYGV+SCEACKAFFKRTIQG+IEY+CPASNECEI KRRRKACQACRF KCLR+GMLKEGVRLDRVRGGRQKY+R E + GG RK + N L+ L EPE L A+PDP PD + TL + FDRE+V TI WAK Sbjct: 80 LVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGG---PRKTAAPVNALVSHLLVVEPEKLYAMPDPAGPDGHLPAVATLCDLFDREIVVTISWAK 244
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|119561|sp|P11475.1|ERR2_RAT (RecName: Full=Steroid hormone receptor ERR2; AltName: Full=Estrogen receptor-like 2; AltName: Full=Estrogen-related receptor beta; Short=ERR-beta; AltName: Full=Nuclear receptor subfamily 3 group B member 2) HSP 1 Score: 205.297 bits (521), Expect = 2.496e-64 Identity = 102/159 (64.15%), Postives = 122/159 (76.73%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---SPYGGLH---PARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEY+CPA+NECEI KRRRK+CQACRF KCL++GMLKEGVRLDRVRGGRQKY+R ++ SPY L PA+K K++ L EP+ L A+P ++P+ K LTTL + DRELV I WAK Sbjct: 104 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYSCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSENSPYLSLQISPPAKK---PLTKIVSYLLVAEPDKLYAMPPDDVPEGDIKALTTLCDLADRELVFLISWAK 259
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|152032433|sp|Q5QJV7.2|ERR1_RAT (RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1 >gi|341941116|sp|O08580.4|ERR1_MOUSE RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen receptor-like 1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1) HSP 1 Score: 204.527 bits (519), Expect = 4.006e-64 Identity = 105/164 (64.02%), Postives = 116/164 (70.73%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE-SPYGGLHPARKLSLE----------ENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASG+HYGV+SCEACKAFFKRTIQG+IEY+CPASNECEI KRRRKACQACRF KCLR+GMLKEGVRLDRVRGGRQKY+R E P P L N L+ L EPE L A+PDP PD + TL + FDRE+V TI WAK Sbjct: 80 LVCGDVASGYHYGVASCEACKAFFKRTIQGSIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDRVRGGRQKYKRRPEVDPLPFPGPFPAGPLAVAGGPRKTAPVNALVSHLLVVEPEKLYAMPDPASPDGHLPAVATLCDLFDREIVVTISWAK 243
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|408360079|sp|Q61539.2|ERR2_MOUSE (RecName: Full=Steroid hormone receptor ERR2; AltName: Full=Estrogen receptor-like 2; AltName: Full=Estrogen-related receptor beta; Short=ERR-beta; AltName: Full=Nuclear receptor subfamily 3 group B member 2) HSP 1 Score: 200.675 bits (509), Expect = 1.602e-62 Identity = 102/159 (64.15%), Postives = 120/159 (75.47%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIE---SPYGGL---HPARKLSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGD+ASG+HYGV+SCEACKAFFKRTIQGNIEY CPA+NECEI KRRRK+CQACRF KCL++GMLKEGVRLDRVRGGRQKY+R ++ SPY L PA+K K++ L E + L A+P ++P+ K LTTL E DRELV I WAK Sbjct: 104 LVCGDIASGYHYGVASCEACKAFFKRTIQGNIEYNCPATNECEITKRRRKSCQACRFMKCLKVGMLKEGVRLDRVRGGRQKYKRRLDSENSPYLNLPISPPAKK---PLTKIVSNLLGVEQDKLYAMPPNDIPEGDIKALTTLCELADRELVFLINWAK 259
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|6015119|sp|Q91250.1|ESR1_TAEGU (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 145.591 bits (366), Expect = 1.935e-40 Identity = 80/177 (45.20%), Postives = 104/177 (58.76%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGR---QKYRR-------------------MIESPYGGLHPARK---LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGGR QK +R + SP H + LSL +++ AL EP + + DPN P ++ +T L+ DRELV I WAK Sbjct: 179 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGRVMKQKRQREEQDSRNGEASSTELRAPTLWASPLVVKHNKKNSPALSLTAEQMVSALLEAEPPLVYSEYDPNRPFNEASMMTLLTNLADRELVHMINWAK 354
BLAST of estrogen related nuclear partial vs. SwissProt
Match: gi|119597|sp|P06212.1|ESR1_CHICK (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 144.436 bits (363), Expect = 5.681e-40 Identity = 79/177 (44.63%), Postives = 104/177 (58.76%), Query Frame = 0 Query: 2 VCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGG---RQKYRR-------------------MIESPYGGLHPARK---LSLEENKLLIALTRCEPEPLLALPDPNLPDDQYKTLTTLSEFFDRELVGTIGWAK 153 VC D ASG+HYGV SCE CKAFFKR+IQG+ +Y CPA+N+C I+K RRK+CQACR +KC +GM+K G+R DR RGG +QK +R + SP H + LSL +++ AL EP + + DPN P ++ +T L+ DRELV I WAK Sbjct: 181 VCNDYASGYHYGVWSCEGCKAFFKRSIQGHNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDR-RGGEMMKQKRQREEQDSRNGEASSTELRAPTLWTSPLVVKHNKKNSPALSLTAEQMVSALLEAEPPIVYSEYDPNRPFNEASMMTLLTNLADRELVHMINWAK 356
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1268017437|ref|XP_022688888.1| (steroid hormone receptor ERR1-like isoform X6 [Varroa jacobsoni]) HSP 1 Score: 229.565 bits (584), Expect = 1.133e-71 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYG-GLHPARKLSLEENKLLIALTRCEPEPL---LALPDPNLP-DDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR E PY P +++S++EN ++ AL CEPEPL L+ + N D L LS+ DRELV TIGWA+ Sbjct: 132 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRNPEGPYQVAAQPVKRISIDENTIISALLSCEPEPLSIRLSAVNNNASLHDPSAALAALSDIMDRELVNTIGWAR 289
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1268017430|ref|XP_022688859.1| (steroid hormone receptor ERR1-like isoform X3 [Varroa jacobsoni]) HSP 1 Score: 229.95 bits (585), Expect = 1.623e-71 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYG-GLHPARKLSLEENKLLIALTRCEPEPL---LALPDPNLP-DDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR E PY P +++S++EN ++ AL CEPEPL L+ + N D L LS+ DRELV TIGWA+ Sbjct: 132 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRNPEGPYQVAAQPVKRISIDENTIISALLSCEPEPLSIRLSAVNNNASLHDPSAALAALSDIMDRELVNTIGWAR 289
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1268017433|ref|XP_022688873.1| (steroid hormone receptor ERR1-like isoform X4 [Varroa jacobsoni]) HSP 1 Score: 229.565 bits (584), Expect = 2.063e-71 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYG-GLHPARKLSLEENKLLIALTRCEPEPL---LALPDPNLP-DDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR E PY P +++S++EN ++ AL CEPEPL L+ + N D L LS+ DRELV TIGWA+ Sbjct: 81 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRNPEGPYQVAAQPVKRISIDENTIISALLSCEPEPLSIRLSAVNNNASLHDPSAALAALSDIMDRELVNTIGWAR 238
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1253757735|ref|XP_022662920.1| (steroid hormone receptor ERR1-like isoform X2 [Varroa destructor]) HSP 1 Score: 229.565 bits (584), Expect = 2.868e-71 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYG-GLHPARKLSLEENKLLIALTRCEPEPL---LALPDPNLP-DDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR E PY P +++S++EN ++ AL CEPEPL L+ + N D L LS+ DRELV TIGWA+ Sbjct: 82 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRNPEGPYQVAAQPVKRISIDENTIISALLSCEPEPLSIRLSAVNNNASLHDPSAALAALSDIMDRELVNTIGWAR 239
BLAST of estrogen related nuclear partial vs. nr
Match: gi|1253757711|ref|XP_022662907.1| (steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757713|ref|XP_022662908.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757715|ref|XP_022662909.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757717|ref|XP_022662910.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757719|ref|XP_022662911.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757721|ref|XP_022662912.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757723|ref|XP_022662914.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757725|ref|XP_022662915.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757727|ref|XP_022662916.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757729|ref|XP_022662917.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757731|ref|XP_022662918.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1253757733|ref|XP_022662919.1| steroid hormone receptor ERR1-like isoform X1 [Varroa destructor] >gi|1268017416|ref|XP_022688807.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni] >gi|1268017418|ref|XP_022688814.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni] >gi|1268017420|ref|XP_022688821.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni] >gi|1268017422|ref|XP_022688829.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni] >gi|1268017424|ref|XP_022688832.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni] >gi|1268017426|ref|XP_022688842.1| steroid hormone receptor ERR1-like isoform X1 [Varroa jacobsoni]) HSP 1 Score: 229.95 bits (585), Expect = 6.398e-71 Identity = 111/158 (70.25%), Postives = 126/158 (79.75%), Query Frame = 0 Query: 1 LVCGDVASGFHYGVSSCEACKAFFKRTIQGNIEYTCPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQKYRRMIESPYG-GLHPARKLSLEENKLLIALTRCEPEPL---LALPDPNLP-DDQYKTLTTLSEFFDRELVGTIGWAK 153 LVCGDVASGFHYGV+SCEACKAFFKRTIQGNIEYTCPA+N+CEINKRRRKACQACRFQKCL+MGMLKEGVRLDRVRGGRQKYRR E PY P +++S++EN ++ AL CEPEPL L+ + N D L LS+ DRELV TIGWA+ Sbjct: 132 LVCGDVASGFHYGVASCEACKAFFKRTIQGNIEYTCPANNDCEINKRRRKACQACRFQKCLKMGMLKEGVRLDRVRGGRQKYRRNPEGPYQVAAQPVKRISIDENTIISALLSCEPEPLSIRLSAVNNNASLHDPSAALAALSDIMDRELVNTIGWAR 289 The following BLAST results are available for this feature:
BLAST of estrogen related nuclear partial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of estrogen related nuclear partial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of estrogen related nuclear partial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold421_size176100:2..6526- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold421_size176100-snap-gene-0.27 ID=maker-scaffold421_size176100-snap-gene-0.27|Name=estrogen related nuclear partial|organism=Tigriopus kingsejongensis|type=gene|length=6525bp|location=Sequence derived from alignment at scaffold421_size176100:2..6526- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'estrogen related nuclear partial' has the following synonyms
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