rna-binding protein musashi homolog rbp6 isoform x6, maker-scaffold422_size175911-snap-gene-0.39 (gene) Tigriopus kingsejongensis

Overview


Name	rna-binding protein musashi homolog rbp6 isoform x6
Unique Name	maker-scaffold422_size175911-snap-gene-0.39
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. L. salmonis genes
Match: EMLSAG00000005340 (supercontig:LSalAtl2s:LSalAtl2s287:281236:323990:-1 gene:EMLSAG00000005340 transcript:EMLSAT00000005340 description:"augustus_masked-LSalAtl2s287-processed-gene-3.0")

HSP 1 Score: 200.675 bits (509), Expect = 7.707e-61
Identity = 91/128 (71.09%), Postives = 110/128 (85.94%), Query Frame = 0

Query:  191 RGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
            RGFGF+TF +P +VDKVLS   H LDGK ++PKVA PR+ +PK+V RTKKIFVGGLSA ++LEDVK YFEQF +++DAML +DK TNRHRGFGFVTF++++VVDK+CEIHFHEIN KMVE KKA PKE
Sbjct:    7 RGFGFVTFSDPNSVDKVLSNGSHDLDGKKIDPKVAFPRRAHPKMVTRTKKIFVGGLSAPSTLEDVKNYFEQFGRIEDAMLMFDKQTNRHRGFGFVTFESEDVVDKVCEIHFHEINNKMVECKKAQPKE 134

HSP 2 Score: 72.7886 bits (177), Expect = 1.329e-14
Identity = 39/101 (38.61%), Postives = 57/101 (56.44%), Query Frame = 0

Query:  151 KMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTN-PKLVMRTKKIFVGGLSATT 250
            K+F+GGLS  +T E ++ YF  FG + + M+M D  T R RGFGF+TF     VDKV  +  H ++ K VE K A P++   P  +    +  + G + TT
Sbjct:   56 KIFVGGLSAPSTLEDVKNYFEQFGRIEDAMLMFDKQTNRHRGFGFVTFESEDVVDKVCEIHFHEINNKMVECKKAQPKEVMIPTTIATRTRPVIRGTNGTT 156

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BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. L. salmonis genes
Match: EMLSAG00000007863 (supercontig:LSalAtl2s:LSalAtl2s460:94042:141135:-1 gene:EMLSAG00000007863 transcript:EMLSAT00000007863 description:"maker-LSalAtl2s460-augustus-gene-1.7")

HSP 1 Score: 204.527 bits (519), Expect = 2.864e-60
Identity = 102/199 (51.26%), Postives = 133/199 (66.83%), Query Frame = 0

Query:  120 VGIDPVDLSYFQSALSLAHALPEGDIPNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
            V +D  ++ Y     S   + P  D  + PGK+F+GGLSWQTTP+ +REYF  FG +          T RSRGFGFITF  P AVD+VL++  H LDGK ++PK A P+  +     +TKKIFVGG+S  TS E+VKA F QF KV++A +  D+ T RHRGFGFVTF++++VVD++CEIHFH +  K VE KKA PKE
Sbjct:   23 VSMDSNNVEYSSQTGSSGRSTPSSD--SSPGKLFVGGLSWQTTPDKLREYFGQFGSV----------TDRSRGFGFITFSTPDAVDRVLAVVTHTLDGKKIDPKHATPKSKSK--ANKTKKIFVGGVSQDTSAEEVKAXFNQFGKVEEAXMLMDQQTKRHRGFGFVTFESEDVVDRVCEIHFHTVKNKKVECKKAQPKE 207

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BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. L. salmonis genes
Match: EMLSAG00000006441 (supercontig:LSalAtl2s:LSalAtl2s351:658541:663148:1 gene:EMLSAG00000006441 transcript:EMLSAT00000006441 description:"maker-LSalAtl2s351-snap-gene-6.33")

HSP 1 Score: 155.992 bits (393), Expect = 5.672e-43
Identity = 86/244 (35.25%), Postives = 128/244 (52.46%), Query Frame = 0

Query:  150 GKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTN-PKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPK-----------EPRGGYGAYHPGGAHPLYSNYFTSNQTQPLGSYGSGGGGGAYPMVSNGGGHPREANVYSTRYHA 381
            GK+F+GGLSW TT E++  YF  FG++ + +VMK+  + RSRGFGF+TF +P  +D VLS   H LDG+ ++PK   PR    PK      K+F+GGL +  +  D++ +F ++ +V + ++ YD+   + RGFGF++F +D+ V++ C  HF  I  K VE K+A P+           E  G      PGG  P+       +     G +     GG  P       HP  A    T Y A
Sbjct:   41 GKLFVGGLSWDTTQETLLRYFGGFGEVIDCVVMKNAESGRSRGFGFVTFSDPANIDAVLSSCPHTLDGRTIDPKACNPRSMQKPKKTNYFPKVFLGGLPSNLTETDLRNFFSRYGEVCEVIIMYDQEKKKSRGFGFLSFSDDQAVNRACAEHFVNIQNKQVEIKRAEPRTQTATWNKDSMEQWGAASMTVPGGPPPITIGSPMQHPAHTNGQHIQQASGGGVP-------HPSSAPQQHTHYSA 277

HSP 2 Score: 59.6918 bits (143), Expect = 7.622e-10
Identity = 31/91 (34.07%), Postives = 48/91 (52.75%), Query Frame = 0

Query:  227 PRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPK 317
            PRK          K+FVGGLS  T+ E +  YF  F +V D ++  +  + R RGFGFVTF +   +D +     H ++G+ ++ K   P+
Sbjct:   29 PRKQRAHEDEEQGKLFVGGLSWDTTQETLLRYFGGFGEVIDCVVMKNAESGRSRGFGFVTFSDPANIDAVLSSCPHTLDGRTIDPKACNPR 119

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BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. L. salmonis genes
Match: EMLSAG00000006940 (supercontig:LSalAtl2s:LSalAtl2s393:593053:595744:-1 gene:EMLSAG00000006940 transcript:EMLSAT00000006940 description:"maker-LSalAtl2s393-snap-gene-5.57")

HSP 1 Score: 138.658 bits (348), Expect = 1.042e-37
Identity = 71/117 (60.68%), Postives = 78/117 (66.67%), Query Frame = 0

Query:  144 DIPNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPV--------------------------HHLDGKNVEPKVAVPRKTNPKL 234
            DIPNDPGKMFIGGLSWQTTPE IREYFS FGDLAEVMVMKDPATRRSRGFGFITFCEP AVDKVL + +                          H ++GK VE K A+P++  P  
Sbjct:   23 DIPNDPGKMFIGGLSWQTTPEXIREYFSQFGDLAEVMVMKDPATRRSRGFGFITFCEPEAVDKVLGLSLIVHTLGPLIPLLFFQDVVDKICEIHFHDINGKMVESKKALPKEPRPNF 139

HSP 2 Score: 105.916 bits (263), Expect = 5.699e-26
Identity = 61/134 (45.52%), Postives = 75/134 (55.97%), Query Frame = 0

Query:  240 KIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDE--------------------------VVDKICEIHFHEINGKMVESKKALPKEPRGG-YGAYHPGGAHPLYSNYFTSNQTQP 346
            K+F+GGLS  T+ E ++ YF QF  + + M+  D  T R RGFGF+TF   E                          VVDKICEIHFH+INGKMVESKKALPKEPR   YG Y   G HP +SN +  +  +P
Sbjct:   30 KMFIGGLSWQTTPEXIREYFSQFGDLAEVMVMKDPATRRSRGFGFITFCEPEAVDKVLGLSLIVHTLGPLIPLLFFQDVVDKICEIHFHDINGKMVESKKALPKEPRPNFYGGY---GHHP-FSNPYIHHPQRP 159

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BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. L. salmonis genes
Match: EMLSAG00000000160 (supercontig:LSalAtl2s:LSalAtl2s1025:101799:103083:1 gene:EMLSAG00000000160 transcript:EMLSAT00000000160 description:"maker-LSalAtl2s1025-augustus-gene-0.45")

HSP 1 Score: 129.798 bits (325), Expect = 3.589e-33
Identity = 70/191 (36.65%), Postives = 110/191 (57.59%), Query Frame = 0

Query:  136 LAHALPEGDIPNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRK--------TNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
            + H+  E   P    K+F+GGL++ TT + +++YF  +G+L +++VM  P TRRSRGFGF+TF +            H +D   +E K A P++        + P+ VMR  K+F+GGL  +T  E +KA+FEQF ++ D ++   + T R RGFGF  + + + VD       H I+G  VE+K+A P+E
Sbjct:    1 MPHSNNETSGPEKERKLFLGGLNYSTTEDGLKKYFEKYGELVDIVVMXFPDTRRSRGFGFVTFAQVDQAXACFEERPHTIDSTTIETKRATPKEEMESADEGSQPE-VMR--KLFIGGLDYSTDDETLKAFFEQFGELVDCVVMKFRDTKRSRGFGFXXYAHXDXVDXXXAARPHTIDGAKVETKRATPRE 188

HSP 2 Score: 115.161 bits (287), Expect = 4.733e-28
Identity = 68/178 (38.20%), Postives = 94/178 (52.81%), Query Frame = 0

Query:  142 EGDIPNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRK--TNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPK 317
            EG  P    K+FIGGL + T  E+++ +F  FG+L + +VMK   T+RSRGFGF  +     VD   +   H +DG  VE K A PR+    P+     KKIF+GGL      ED+K YF                 ++ RGFGFV FD+ + VDKI  I  H +N   ++ KKA+ +
Sbjct:  101 EGSQPEVMRKLFIGGLDYSTDDETLKAFFEQFGELVDCVVMKFRDTKRSRGFGFXXYAHXDXVDXXXAARPHTIDGAKVETKRATPREDVAKPESSSSVKKIFIGGLKDGIEDEDLKDYF-----------------SKKRGFGFVEFDDYDPVDKIVLIGKHYLNDWRIDVKKAISR 261

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BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. L. salmonis genes
Match: EMLSAG00000005517 (supercontig:LSalAtl2s:LSalAtl2s297:281209:289703:-1 gene:EMLSAG00000005517 transcript:EMLSAT00000005517 description:"maker-LSalAtl2s297-augustus-gene-3.62")

HSP 1 Score: 124.79 bits (312), Expect = 3.745e-30
Identity = 65/182 (35.71%), Postives = 97/182 (53.30%), Query Frame = 0

Query:  152 MFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVP------------------RKTNPKLVMRTK-KIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKA 314
            +F+G LS  TT   ++ YFS FG L  V +   P   +++ FGF+ F     + K+L+ P H +DGK +E + A                     + NP++    K KIFVGG+S    ++D+++YF  F  V++  L  D +T RHRGFGFVTF+N+   + +C   +H I  K VE KKA
Sbjct:   24 LFVGNLSLYTTEFKLQTYFSTFGTLTSVKICTHPENGKNKRFGFLNFESADVISKILNYPRHEIDGKILEIRYASKNMLNKRKNSVVKAKSPENEEVNPRIETSNKAKIFVGGVSQNAKVDDLRSYFSSFGPVQNVTLLPDHITGRHRGFGFVTFENESTAEVVCSSRYHTIKMKKVECKKA 205

HSP 2 Score: 58.5362 bits (140), Expect = 3.407e-9
Identity = 33/82 (40.24%), Postives = 45/82 (54.88%), Query Frame = 0

Query:  150 GKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVA-VPRKT 230
             K+F+GG+S     + +R YFS FG +  V ++ D  T R RGFGF+TF   +  + V S   H +  K VE K A V R T
Sbjct:  130 AKIFVGGVSQNAKVDDLRSYFSSFGPVQNVTLLPDHITGRHRGFGFVTFENESTAEVVCSSRYHTIKMKKVECKKASVSRAT 211

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BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. L. salmonis genes
Match: EMLSAG00000001242 (supercontig:LSalAtl2s:LSalAtl2s1202:105888:108177:-1 gene:EMLSAG00000001242 transcript:EMLSAT00000001242 description:"maker-LSalAtl2s1202-snap-gene-0.50")

HSP 1 Score: 104.375 bits (259), Expect = 3.140e-24
Identity = 66/180 (36.67%), Postives = 96/180 (53.33%), Query Frame = 0

Query:  151 KMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATR-RSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVP-----RKTNPKLVMRT-------KKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPK 317
            K+F+GGL+ +T  + +R++FS FG L +V VM+D      SRGFGF+TF      +  L    H L+ K +EPK A P     ++T P+L  +        + IFVG L  T   ED+  YF  F KV  A+  YDK T   + FGFV F +  +V K+  +  H I GK +  + + P+
Sbjct:   83 KLFLGGLAPETIEKDLRKHFSQFGQLVDVQVMRDREQGGISRGFGFVTFACSFMAETALEQKEHILNXKKIEPKYATPDIPRYKRTIPELEAQMDEECKNKRSIFVGALKDTIGEEDLVRYFSGFGKVIRAVKIYDKETGNKKTFGFVDFADFGIVRKVMNVTKHYIQGKRIRVELSRPR 262

HSP 2 Score: 58.151 bits (139), Expect = 2.735e-9
Identity = 35/118 (29.66%), Postives = 60/118 (50.85%), Query Frame = 0

Query:  152 MFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAM 269
            +F+G L      E +  YFS FG +   + + D  T   + FGF+ F +   V KV+++  H++ GK +  +++ PR    +   +TK +FVGGL       ++  YF +F  V  A+
Sbjct:  186 IFVGALKDTIGEEDLVRYFSGFGKVIRAVKIYDKETGNKKTFGFVDFADFGIVRKVMNVTKHYIQGKRIRVELSRPR---IEFSHQTKTVFVGGLEDGIDDPELYKYFSEFGFVTRAL 300

HSP 3 Score: 52.7582 bits (125), Expect = 1.247e-7
Identity = 32/99 (32.32%), Postives = 53/99 (53.54%), Query Frame = 0

Query:  223 KVAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVT-NRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKEPR 320
            ++A  ++T    +   +K+F+GGL+  T  +D++ +F QF ++ D  +  D+      RGFGFVTF    + +   E   H +N K +E K A P  PR
Sbjct:   66 RIAKEKETELLYMREERKLFLGGLAPETIEKDLRKHFSQFGQLVDVQVMRDREQGGISRGFGFVTFACSFMAETALEQKEHILNXKKIEPKYATPDIPR 164

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BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. L. salmonis genes
Match: EMLSAG00000007356 (supercontig:LSalAtl2s:LSalAtl2s418:127995:128853:-1 gene:EMLSAG00000007356 transcript:EMLSAT00000007356 description:"snap_masked-LSalAtl2s418-processed-gene-1.5")

HSP 1 Score: 93.2041 bits (230), Expect = 5.157e-22
Identity = 53/157 (33.76%), Postives = 87/157 (55.41%), Query Frame = 0

Query:  144 DIPNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSATT-SLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEI 299
            D+ ++  K+F+GGL W+T    ++EYFS FG++    +  +  T +SR F F+ F +  +V KVL    H ++ K V+ K A   K  P       K+F GGL   + S E++K YF  F  + +  +  DK+ N  + FGFVTF+ +E + K+ ++
Sbjct:    5 DLSDEDRKIFVGGLCWETGEVQLKEYFSQFGEIESANLKLNSVTGKSRCFAFVLFKDTESVSKVLQ-NTHAINSKKVDVKRA---KAKP------GKVFFGGLHPESPSEEELKEYFSHFGNILEFEIPQDKIKNERKSFGFVTFEKEESMKKVLKV 151

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BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. L. salmonis genes
Match: EMLSAG00000008061 (supercontig:LSalAtl2s:LSalAtl2s47:228294:229145:-1 gene:EMLSAG00000008061 transcript:EMLSAT00000008061 description:"augustus_masked-LSalAtl2s47-processed-gene-2.0")

HSP 1 Score: 86.6557 bits (213), Expect = 3.679e-19
Identity = 52/171 (30.41%), Postives = 81/171 (47.37%), Query Frame = 0

Query:  147 NDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPK 317
             D  K+F+GGL        I+E+F  FG++  + +  DP T RSRGF F+ F     ++K +S           E  V   +    K   +  K++VG L    S ED+K +F Q+  V +    +DK  N  + F F+TF+ +E   K+ +     + G  +E KK  PK
Sbjct:   21 EDDRKLFVGGLPQDAKDCDIKEHFEGFGEIESINIKTDPQTGRSRGFAFVVFKSLEGLEKAVS----------AEHTVKSKKVAVKKAQAKQGKVYVGKLKPEISDEDIKTHFSQYGPVANVEQPFDKTKNERKNFCFITFEKEEPAKKLLKEGTVTLKGAELEIKKVXPK 181

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BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. L. salmonis genes
Match: EMLSAG00000005342 (supercontig:LSalAtl2s:LSalAtl2s287:336138:336664:-1 gene:EMLSAG00000005342 transcript:EMLSAT00000005342 description:"snap-LSalAtl2s287-processed-gene-3.10")

HSP 1 Score: 80.4925 bits (197), Expect = 4.047e-19
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0

Query:  151 KMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFIT 197
            KMFIGGLSWQTTPE ++EYF  FGD+AEVMVMKDP TRRS     I+
Sbjct:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52

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BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. SwissProt
Match: gi|1350822|sp|P49312.2|ROA1_MOUSE (RecName: Full=Heterogeneous nuclear ribonucleoprotein A1; Short=hnRNP A1; AltName: Full=HDP-1; AltName: Full=Helix-destabilizing protein; AltName: Full=Single-strand-binding protein; AltName: Full=Topoisomerase-inhibitor suppressed; AltName: Full=hnRNP core protein A1; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed >gi|156637352|sp|A5A6H4.1|ROA1_PANTR RecName: Full=Heterogeneous nuclear ribonucleoprotein A1; Short=hnRNP A1; AltName: Full=Helix-destabilizing protein; AltName: Full=Single-strand-binding protein; AltName: Full=hnRNP core protein A1; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed >gi|172046785|sp|P09867.2|ROA1_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1; Short=hnRNP A1; AltName: Full=Helix-destabilizing protein; AltName: Full=Single-strand RNA-binding protein; AltName: Full=Unwinding protein 1; Short=UP1; AltName: Full=hnRNP core protein A1; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed)

HSP 1 Score: 154.451 bits (389), Expect = 1.896e-41
Identity = 76/175 (43.43%), Postives = 110/175 (62.86%), Query Frame = 0

Query:  146 PNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRK--TNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
            P    K+FIGGLS++TT ES+R +F  +G L + +VM+DP T+RSRGFGF+T+     VD  ++   H +DG+ VEPK AV R+    P   +  KKIFVGG+   T    ++ YFEQ+ K++   +  D+ + + RGF FVTFD+ + VDKI    +H +NG   E +KAL K+
Sbjct:   10 PEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALSKQ 184

HSP 2 Score: 71.633 bits (174), Expect = 2.137e-12
Identity = 34/93 (36.56%), Postives = 59/93 (63.44%), Query Frame = 0

Query:  226 VPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
            + +  +PK   + +K+F+GGLS  T+ E ++++FEQ+  + D ++  D  T R RGFGFVT+   E VD       H+++G++VE K+A+ +E
Sbjct:    1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSRE 93

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BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. SwissProt
Match: gi|1710624|sp|P51990.1|RO22_XENLA (RecName: Full=Heterogeneous nuclear ribonucleoprotein A2 homolog 2; AltName: Full=hnRNP A2(B))

HSP 1 Score: 155.606 bits (392), Expect = 2.085e-41
Identity = 76/171 (44.44%), Postives = 111/171 (64.91%), Query Frame = 0

Query:  151 KMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRK--TNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKEP 319
            K+FIGGLS++TT ES+R ++  +G L + +VM+DPA++RSRGFGF+TF     VD  +S   H +DG+ VEPK AV R+    P   +  KK+FVGG+   T    ++ YFE++ K++   +  DK + + RGFGFVTF++ + VDKI    +H ING   E +KAL K+ 
Sbjct:   10 KLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHTINGHNAEVRKALSKQE 180

HSP 2 Score: 67.3958 bits (163), Expect = 6.791e-11
Identity = 33/88 (37.50%), Postives = 54/88 (61.36%), Query Frame = 0

Query:  239 KKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKEPRGGYGAY 326
            +K+F+GGLS  T+ E ++ ++EQ+ ++ D ++  D  + R RGFGFVTF     VD       H I+G++VE K+A+ +E     GA+
Sbjct:    9 RKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMSARPHTIDGRVVEPKRAVAREESAKPGAH 96

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BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. SwissProt
Match: gi|224493240|sp|A7VJC2.1|ROA2_RAT (RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1; Short=hnRNP A2/B1)

HSP 1 Score: 154.836 bits (390), Expect = 2.855e-41
Identity = 75/170 (44.12%), Postives = 110/170 (64.71%), Query Frame = 0

Query:  151 KMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKT--NPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
            K+FIGGLS++TT ES+R Y+  +G L + +VM+DPA++RSRGFGF+TF     VD  ++   H +DG+ VEPK AV R+    P   +  KK+FVGG+   T    ++ YFE++ K+    +  D+ + + RGFGFVTFD+ + VDKI    +H ING   E +KAL ++
Sbjct:   22 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHTINGHNAEVRKALSRQ 191

HSP 2 Score: 75.485 bits (184), Expect = 1.591e-13
Identity = 41/103 (39.81%), Postives = 61/103 (59.22%), Query Frame = 0

Query:  224 VAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKEPRGGYGAY 326
            V + RK   K   R  K+F+GGLS  T+ E ++ Y+EQ+ K+ D ++  D  + R RGFGFVTF +   VD       H I+G++VE K+A+ +E  G  GA+
Sbjct:    8 VPLERKKREKEQFR--KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAH 108

[Close]

BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. SwissProt
Match: gi|133255|sp|P04256.3|ROA1_RAT (RecName: Full=Heterogeneous nuclear ribonucleoprotein A1; Short=hnRNP A1; AltName: Full=Helix-destabilizing protein; Short=HDP; AltName: Full=Single-strand RNA-binding protein; AltName: Full=hnRNP core protein A1; Contains: RecName: Full=Heterogeneous nuclear ribonucleoprotein A1, N-terminally processed)

HSP 1 Score: 154.066 bits (388), Expect = 2.974e-41
Identity = 76/175 (43.43%), Postives = 110/175 (62.86%), Query Frame = 0

Query:  146 PNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRK--TNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
            P    K+FIGGLS++TT ES+R +F  +G L + +VM+DP T+RSRGFGF+T+     VD  ++   H +DG+ VEPK AV R+    P   +  KKIFVGG+   T    ++ YFEQ+ K++   +  D+ + + RGF FVTFD+ + VDKI    +H +NG   E +KAL K+
Sbjct:   10 PEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALCKQ 184

HSP 2 Score: 71.633 bits (174), Expect = 2.217e-12
Identity = 34/93 (36.56%), Postives = 59/93 (63.44%), Query Frame = 0

Query:  226 VPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
            + +  +PK   + +K+F+GGLS  T+ E ++++FEQ+  + D ++  D  T R RGFGFVT+   E VD       H+++G++VE K+A+ +E
Sbjct:    1 MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRVVEPKRAVSRE 93

[Close]

BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. SwissProt
Match: gi|133258|sp|P17130.1|ROA1_XENLA (RecName: Full=Heterogeneous nuclear ribonucleoproteins A1 homolog; Short=hnRNP A1; AltName: Full=Helix-destabilizing protein; AltName: Full=Single-strand-binding protein; AltName: Full=hnRNP core protein A1)

HSP 1 Score: 155.221 bits (391), Expect = 3.050e-41
Identity = 80/202 (39.60%), Postives = 123/202 (60.89%), Query Frame = 0

Query:  140 LPEGDIPNDPG---KMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRK--TNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE----------PRGGYGAY 326
            + + + PN+P    K+FIGGLS++TT ES+RE+F  +G L + +VM+DP ++RSRGFGF+T+     VD  ++   H +DG+ VEPK AV R+  + P   +  KKIFVGG+   T  + ++ YFEQ+ K++   +  D+ + + RGF FVTF++ + VDKI    +H +N    + +KAL K+           RGG G Y
Sbjct:    1 MHKSEAPNEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHTVNNHNSQVRKALSKQEMASVSGSQRERGGSGNY 202

[Close]

BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. nr
Match: gi|1325271223|ref|XP_023320218.1| (RNA-binding protein Musashi homolog Rbp6-like [Eurytemora affinis])

HSP 1 Score: 326.635 bits (836), Expect = 8.189e-105
Identity = 151/192 (78.65%), Postives = 171/192 (89.06%), Query Frame = 0

Query:  144 DIPNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKEPRGGY---GAYHPGGAH 332
            ++PNDPGKMFIGGLSWQTTPE++R YFS FGD+AEVMVMKDP TRRSRGFGFITF    +VDKVL++P H +DGK VEPK+AVPRK+NPK+V+RTKKIFVGGLS TTSLED+KAYFEQFSKVK++MLAYDKVTNRHRGFGFVTFDN+EVVDKICEIHFHEINGKMVESKKA+PKEPRG       ++P   H
Sbjct:   25 EVPNDPGKMFIGGLSWQTTPENVRVYFSQFGDVAEVMVMKDPVTRRSRGFGFITFTHANSVDKVLALPAHTIDGKVVEPKIAVPRKSNPKMVLRTKKIFVGGLSNTTSLEDIKAYFEQFSKVKESMLAYDKVTNRHRGFGFVTFDNEEVVDKICEIHFHEINGKMVESKKAMPKEPRGNMNFSNCFYPTLPH 216

[Close]

BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. nr
Match: gi|642935221|ref|XP_008199697.1| (PREDICTED: RNA-binding protein Musashi homolog Rbp6 isoform X5 [Tribolium castaneum])

HSP 1 Score: 293.508 bits (750), Expect = 1.856e-91
Identity = 131/176 (74.43%), Postives = 154/176 (87.50%), Query Frame = 0

Query:  143 GDIPNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
             ++PNDPGKMFIGGLSWQT+PES+REYFS +GD+ EVMVMKDPATRRSRGFGFITF +P +VDKVL+   H LDGK ++PKVA PR+ +PK+V RTKKIFVGGLSA T+LEDVK+YFEQF  ++DAML +DK TNRHRGFGFVTF +++VVDK+CEIHFHEIN KMVE KKA PKE
Sbjct:   15 AEVPNDPGKMFIGGLSWQTSPESLREYFSKYGDITEVMVMKDPATRRSRGFGFITFTDPASVDKVLAQGTHELDGKKIDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 190

[Close]

BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. nr
Match: gi|642935213|ref|XP_008199692.1| (PREDICTED: RNA-binding protein Musashi homolog Rbp6 isoform X2 [Tribolium castaneum])

HSP 1 Score: 294.278 bits (752), Expect = 2.287e-91
Identity = 131/176 (74.43%), Postives = 154/176 (87.50%), Query Frame = 0

Query:  143 GDIPNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
             ++PNDPGKMFIGGLSWQT+PES+REYFS +GD+ EVMVMKDPATRRSRGFGFITF +P +VDKVL+   H LDGK ++PKVA PR+ +PK+V RTKKIFVGGLSA T+LEDVK+YFEQF  ++DAML +DK TNRHRGFGFVTF +++VVDK+CEIHFHEIN KMVE KKA PKE
Sbjct:   15 AEVPNDPGKMFIGGLSWQTSPESLREYFSKYGDITEVMVMKDPATRRSRGFGFITFTDPASVDKVLAQGTHELDGKKIDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 190

[Close]

BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. nr
Match: gi|1279721691|ref|XP_022905417.1| (RNA-binding protein Musashi homolog Rbp6 isoform X2 [Onthophagus taurus])

HSP 1 Score: 293.893 bits (751), Expect = 3.283e-91
Identity = 130/176 (73.86%), Postives = 154/176 (87.50%), Query Frame = 0

Query:  143 GDIPNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
             ++PNDPGKMFIGGLSWQT+PES+REYFS +G++ EVMVMKDPATRRSRGFGFITF +P +VDKVL+   H LDGK ++PKVA PR+ +PK+V RTKKIFVGGLSA T+LEDVK+YFEQF  ++DAML +DK TNRHRGFGFVTF +++VVDK+CEIHFHEIN KMVE KKA PKE
Sbjct:   15 AEVPNDPGKMFIGGLSWQTSPESLREYFSKYGEITEVMVMKDPATRRSRGFGFITFADPASVDKVLAQGTHELDGKKIDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 190

[Close]

BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. nr
Match: gi|1279721697|ref|XP_022905421.1| (RNA-binding protein Musashi homolog Rbp6 isoform X5 [Onthophagus taurus])

HSP 1 Score: 292.738 bits (748), Expect = 3.613e-91
Identity = 130/176 (73.86%), Postives = 154/176 (87.50%), Query Frame = 0

Query:  143 GDIPNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
             ++PNDPGKMFIGGLSWQT+PES+REYFS +G++ EVMVMKDPATRRSRGFGFITF +P +VDKVL+   H LDGK ++PKVA PR+ +PK+V RTKKIFVGGLSA T+LEDVK+YFEQF  ++DAML +DK TNRHRGFGFVTF +++VVDK+CEIHFHEIN KMVE KKA PKE
Sbjct:   15 AEVPNDPGKMFIGGLSWQTSPESLREYFSKYGEITEVMVMKDPATRRSRGFGFITFADPASVDKVLAQGTHELDGKKIDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 190

[Close]

BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. nr
Match: gi|1101368747|ref|XP_018915701.1| (PREDICTED: RNA-binding protein Musashi homolog Rbp6 isoform X2 [Bemisia tabaci])

HSP 1 Score: 291.582 bits (745), Expect = 6.521e-91
Identity = 130/175 (74.29%), Postives = 154/175 (88.00%), Query Frame = 0

Query:  144 DIPNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
            ++PNDPGKMFIGGLSWQT+PES+REYFS FG+++EVMVMKDPATRRSRGFGF+TF E ++V+KVLS  +H LDGK ++PKVA PR+ +PK+V RTKKIFVGGLSA T+LEDVK YFEQF  ++DAML +DK TNRHRGFGFVTF  ++VVDK+CEIHFHEIN KMVE KKA PKE
Sbjct:   15 EVPNDPGKMFIGGLSWQTSPESLREYFSKFGEISEVMVMKDPATRRSRGFGFVTFAEASSVEKVLSQAIHELDGKKIDPKVAFPRRAHPKMVTRTKKIFVGGLSAPTTLEDVKTYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQCEDVVDKVCEIHFHEINNKMVECKKAQPKE 189

[Close]

BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. nr
Match: gi|820840264|ref|XP_012351010.1| (PREDICTED: RNA-binding protein Musashi homolog Rbp6 isoform X9 [Apis florea])

HSP 1 Score: 290.812 bits (743), Expect = 9.127e-91
Identity = 130/176 (73.86%), Postives = 153/176 (86.93%), Query Frame = 0

Query:  143 GDIPNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
             ++PNDPGKMFIGGLSWQT+PES+REYF+ +GD+ EVMVMKDP TRRSRGFGFITF +P +VDKVL+   H LDGK ++PKVA PR+T+PK+V RTKKIFVGGLSA T+LEDVK YFEQF  ++DAML +DK TNRHRGFGFVTF +++VVDK+CEIHFHEIN KMVE KKA PKE
Sbjct:   15 AEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 190

[Close]

BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. nr
Match: gi|1000749317|ref|XP_015597447.1| (PREDICTED: RNA-binding protein Musashi homolog Rbp6 isoform X6 [Cephus cinctus])

HSP 1 Score: 291.967 bits (746), Expect = 1.070e-90
Identity = 130/176 (73.86%), Postives = 153/176 (86.93%), Query Frame = 0

Query:  143 GDIPNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
             ++PNDPGKMFIGGLSWQT+PES+REYF+ +GD+ EVMVMKDP TRRSRGFGFITF +P +VDKVL+   H LDGK ++PKVA PR+T+PK+V RTKKIFVGGLSA T+LEDVK YFEQF  ++DAML +DK TNRHRGFGFVTF +++VVDK+CEIHFHEIN KMVE KKA PKE
Sbjct:   15 AEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQGAHELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 190

[Close]

BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. nr
Match: gi|1069671748|ref|XP_018317629.1| (PREDICTED: RNA-binding protein Musashi homolog Rbp6 isoform X1 [Trachymyrmex zeteki])

HSP 1 Score: 290.041 bits (741), Expect = 1.074e-90
Identity = 130/176 (73.86%), Postives = 153/176 (86.93%), Query Frame = 0

Query:  143 GDIPNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
             ++PNDPGKMFIGGLSWQT+PES+REYF+ +GD+ EVMVMKDP TRRSRGFGFITF +P +VDKVL+   H LDGK ++PKVA PR+T+PK+V RTKKIFVGGLSA T+LEDVK YFEQF  ++DAML +DK TNRHRGFGFVTF +++VVDK+CEIHFHEIN KMVE KKA PKE
Sbjct:   15 AEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 190

[Close]

BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. nr
Match: gi|1070137673|ref|XP_018365175.1| (PREDICTED: RNA-binding protein Musashi homolog Rbp6 isoform X1 [Trachymyrmex cornetzi])

HSP 1 Score: 288.5 bits (737), Expect = 1.146e-90
Identity = 130/176 (73.86%), Postives = 153/176 (86.93%), Query Frame = 0

Query:  143 GDIPNDPGKMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFITFCEPTAVDKVLSMPVHHLDGKNVEPKVAVPRKTNPKLVMRTKKIFVGGLSATTSLEDVKAYFEQFSKVKDAMLAYDKVTNRHRGFGFVTFDNDEVVDKICEIHFHEINGKMVESKKALPKE 318
             ++PNDPGKMFIGGLSWQT+PES+REYF+ +GD+ EVMVMKDP TRRSRGFGFITF +P +VDKVL+   H LDGK ++PKVA PR+T+PK+V RTKKIFVGGLSA T+LEDVK YFEQF  ++DAML +DK TNRHRGFGFVTF +++VVDK+CEIHFHEIN KMVE KKA PKE
Sbjct:   15 AEVPNDPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKVLAQGNHELDGKKIDPKVAFPRRTHPKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINNKMVECKKAQPKE 190

The following BLAST results are available for this feature:

BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. L. salmonis genes
BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. SwissProt
BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. nr

BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 21


Match Name	E-value	Identity	Description
EMLSAG00000005340	7.707e-61	71.09	supercontig:LSalAtl2s:LSalAtl2s287:281236:323990:-...	[more]
EMLSAG00000007863	2.864e-60	51.26	supercontig:LSalAtl2s:LSalAtl2s460:94042:141135:-1...	[more]
EMLSAG00000006441	5.672e-43	35.25	supercontig:LSalAtl2s:LSalAtl2s351:658541:663148:1...	[more]
EMLSAG00000006940	1.042e-37	60.68	supercontig:LSalAtl2s:LSalAtl2s393:593053:595744:-...	[more]
EMLSAG00000000160	3.589e-33	36.65	supercontig:LSalAtl2s:LSalAtl2s1025:101799:103083:...	[more]
EMLSAG00000005517	3.745e-30	35.71	supercontig:LSalAtl2s:LSalAtl2s297:281209:289703:-...	[more]
EMLSAG00000001242	3.140e-24	36.67	supercontig:LSalAtl2s:LSalAtl2s1202:105888:108177:...	[more]
EMLSAG00000007356	5.157e-22	33.76	supercontig:LSalAtl2s:LSalAtl2s418:127995:128853:-...	[more]
EMLSAG00000008061	3.679e-19	30.41	supercontig:LSalAtl2s:LSalAtl2s47:228294:229145:-1...	[more]
EMLSAG00000005342	4.047e-19	72.34	supercontig:LSalAtl2s:LSalAtl2s287:336138:336664:-...	[more]

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BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1350822\|sp\|P49312.2\|ROA1_MOUSE	1.896e-41	43.43	RecName: Full=Heterogeneous nuclear ribonucleoprot...	[more]
gi\|1710624\|sp\|P51990.1\|RO22_XENLA	2.085e-41	44.44	RecName: Full=Heterogeneous nuclear ribonucleoprot...	[more]
gi\|224493240\|sp\|A7VJC2.1\|ROA2_RAT	2.855e-41	44.12	RecName: Full=Heterogeneous nuclear ribonucleoprot...	[more]
gi\|133255\|sp\|P04256.3\|ROA1_RAT	2.974e-41	43.43	RecName: Full=Heterogeneous nuclear ribonucleoprot...	[more]
gi\|133258\|sp\|P17130.1\|ROA1_XENLA	3.050e-41	39.60	RecName: Full=Heterogeneous nuclear ribonucleoprot...	[more]

Pages

BLAST of rna-binding protein musashi homolog rbp6 isoform x6 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1325271223\|ref\|XP_023320218.1\|	8.189e-105	78.65	RNA-binding protein Musashi homolog Rbp6-like [Eur...	[more]
gi\|642935221\|ref\|XP_008199697.1\|	1.856e-91	74.43	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]
gi\|642935213\|ref\|XP_008199692.1\|	2.287e-91	74.43	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]
gi\|1279721691\|ref\|XP_022905417.1\|	3.283e-91	73.86	RNA-binding protein Musashi homolog Rbp6 isoform X...	[more]
gi\|1279721697\|ref\|XP_022905421.1\|	3.613e-91	73.86	RNA-binding protein Musashi homolog Rbp6 isoform X...	[more]
gi\|1101368747\|ref\|XP_018915701.1\|	6.521e-91	74.29	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]
gi\|820840264\|ref\|XP_012351010.1\|	9.127e-91	73.86	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]
gi\|1000749317\|ref\|XP_015597447.1\|	1.070e-90	73.86	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]
gi\|1069671748\|ref\|XP_018317629.1\|	1.074e-90	73.86	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]
gi\|1070137673\|ref\|XP_018365175.1\|	1.146e-90	73.86	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold422_size175911	supercontig	scaffold422_size175911:149385..154864 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold422_size175911-snap-gene-0.39-mRNA-1	maker-scaffold422_size175911-snap-gene-0.39-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold422_size175911:149385..154864-

gene from alignment at scaffold422_size175911:149385..154864-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold422_size175911-snap-gene-0.39 ID=maker-scaffold422_size175911-snap-gene-0.39|Name=rna-binding protein musashi homolog rbp6 isoform x6|organism=Tigriopus kingsejongensis|type=gene|length=5480bp|location=Sequence derived from alignment at scaffold422_size175911:149385..154864- (Tigriopus kingsejongensis)
CACAGGCACTCCACCAGCACTCTCTGGCCCTGTGGCGATTCGGCGATTCG
GCGTTGTTCAGCCAATGGCCGCCCGTTCCTGAGAGCTGGCAGTGCGAGGA
GAGCCTGGAGAAAACGCCCCAAATCCCCGGATTGGATCACTCCCGCCGTG
ATTGGAGTGTGGGACAGGTGAGAGGGGAGGCGAGGTCGGGTCAGGGGGGC
GGGTCGGAGTCCTGTCACGCCTCCGGAGGGCCTGGGAGCGCGAGGCTGGC
ACCACGTTTTTGTATACATACCTACGACTCTACTCTCTCTCTCTCTCTCT
CTCTCTCCCTCTCTCTCTCTCCCTCTGTCGTTAGTCTGTAGTGTTTCACT
GTTTCACTGTTTCACTCCCAGGCGACACGCGAGTCGACCTGGCCGGGACC
GAGTCTATTTCAAGTCCTCGTGGGCTTTCCGGGGATAAACATTGGTGCCC
TGCCAGTGAGCTACGCGTGAATGCCATGATGAGCCCGGCCGTGCCCGAGT
CGGCCTCCTCCTCCGCCGTGCGATTGGAGGCGACCACGCCGACCTCGGTC
GGCATCGACCCGGTGGACTTGAGCTACTTCCAGTCGGCCCTGAGTCTGGC
CCACGCCCTGCCCGAGGGTGACATCCCCAACGACCCCGGCAAGATGTTCA
TCGGAGGCCTCTCCTGGCAGACCACGCCTGAGAGCATCCGGGAGTACTTT
TCCTTCTTCGGCGACCTGGCTGAGGTCATGGTCATGAAGGATCCGGCCAC
CCGACGCTCCCGAGGCTTCGGCTTCATCACCTTCTGCGAGCCCACGGCGG
TGGATAAGGTAATCTAATGATAACGCAAGCCATCCTTCCGACTGCGCCAG
GGACTGTTTGTTTGCCGCAAGGCGGAGATCGACTGTTAGGCCATTCTCAA
GTCAGGTTGACTCATGCACACGGTGATATCGCTAAACATTTCGACTTGAT
ACCGGAAAGCCAGCCCCGAACCTCATGGGTTGAGTGGCCTAAGCCGTGAT
TTATATCATTGGTGCACCCAGGGCCGCGGGTTAGAAACCCGTCCCTGTCG
AGTTTCGGGCACCCGCGGGCTTCAAGTCCAGTTATTGAGACTCCGCTCGG
CCAAGCCACCATAGGTCAGGGTCAGCGAGCGCTGGGCTGGTGCCGAGCCG
CTGGGGTTCGCATCCCGGGTCTTAGTAGTTCACGGCCACTAGTGCTGTTA
ATGCCCAGCTATGGCTTGCTGCCTGGTCGGGTTGAATTTTCAAGGGTTAA
ATCGATTAGATTGGACGGCCAGTCCTTAAGGGAAGGTGATGATTTATGAG
GCATTTATGGCCCCGTTGGCTGACCATGTCACAACAGAGATTGGCTGGCT
GGACAAAAATGTACGGGGCCTGCCAAAGGAACTCCTTCCGGCGGGATTTA
AGTGGGCATTACTGGGAGACGATACATTTGTTCACCAGACCGACTTCGTA
ATGCCTACGATTTCCTGGTAGCCATGCCTAAGGCCTGTGCAGGATAATTC
TTGAAAGCTGAACAAGTGCTTGCCGGTATTGTCAGTCTGGTCTCGATGAA
GAAAACCGGCACCAAATTGAGGGCATCACAATTGATCTGGGGATGTTCCT
CGGGCTTGCCAAGTTCCGGCCACTAGTGGTGTTCACACATATGCTGCCTT
TGTGCAATTAAAATGGACGGACCTGGGGTCATTCCTCGAGGCTAAGGTAA
TAATTCATGATCAATTTGTCAAGCTGGCGGACTATGTCTCAATTGAGATT
TCCCTAGCCGGGCAGAAATTCCCGGGACCTTCCAAAGAAAGAAAAACAAA
GATCTGGGCTCCGTCTTGGGTTGCTTGAAACTAATTTGGGACACGCAACA
GACCTCTCGGAAGTGTGTACAGACTTCAAAAATTACGACCAAGTGCCGTG
ATAGATCACAACAGATGGTAGAGTCCTCCTTGATTCTACTAGCTGAAAGC
CAAGATCAATCGGAGTACTTGGCAAACATTAGGCGGATGAACCATCCTGG
ACTGCTATTCGCGGGTACTCATCGCCAGGGGGTGCACACAAACCCGCTTA
CTGAGTCGCAACTCGGGCATTAAATTATGAGGAATTTCTTGAGCAAAACC
CCCTAAGCCTTACACCATGTCTCGTACAATATTGGCAACTGCGTGCCAGG
TCTGGAATCCGCATCTGAAGAAAGACAACAGTGGACGCGGCAGTCCCGAG
AAGGTTCCCTCCTCTGGTTCGGTACCGGAACTCTTACTTGAATGAGTCAT
ACCTTAAGAGACAATAATCCACATTTGACATCTCATCATTAAGAAATCCG
TGGATGTTGGGGCCGAGGTCCTGTAGATGCATCACCTTCAGACGCCAGAG
TATTACCCTCCTTGTTCCATGTGTACAATGAACCAGGTCGACCCCTGTTG
TCCCAAAGTGAGAACCTGTTACACGGATCCACACTCAAAAAGACACGTGG
AGGTGGCGGAATTGCCCTCGAGGCGCCGGAATATCTCCTTCATAAGAGTC
GTCAAGTTGCGGAATCACATTCCATCCGAATCGAACAAAAAAACATCTGT
CCGGGGATTCTGAAGTGAATTATAGAGGAAGTGAATTACAGAAGCTCGAT
TTCTCGAAGTTTTTAGATTCTGTTTGATGTGCTTTAACAAATGTTCATGC
ATGCACTCTACGTATGTGTGTGTGCTCACGAAATAGTTAAACTGTGAACG
TTAGTCGGGGCAAATAATGCTGCTAACGATAGTTCCCAATTTGAGAGATT
CCTCCGTCTTTGGGACCGAAATGGGAATAATTTGGGGAAGGCCATGTAGG
TGTGCGTTATCAGTGCGATTTCAACATTTGGCCAATAGTTGCGTACAAGA
ATGACTTGTGAGGTAGTATTAGGTTGAATGTCATAAATAATTGGGCGAAG
TATTTGTGATTCAAAAGAGTTTACCGATGTCCAATTGAATAGACAGGACC
ATATCGGGCTAGACGAGACTAAAACACTGGCATTGTGTAGAAAAGCAGAA
GTTCCTCATCGGGCTAAGGGATGCCTATTAGTTTTCCGAGGTTCGAGGAC
ACCAAATGTGCCATCCAAAGTCACGAACTCGAAACTGATTGCGAGCGTGG
AAAGCATTAAGGTTTGAAAGCTGGAAGGGAATATAACTAGAGTTGTAGTC
TGGTGGCATGAAGGAGCGCCAAGTATCCCGATGTTGGAATAAAAACGACG
CATCTTCGACTGACGAAAGTTCACGCGGTGTTTCGGGCGCACGACGCAAG
CCATTGCAAGACCAGCAACCGCCCCAGGTCGTTTTTATTACTAGATCAGG
AAACTTTGTTGTCGCTTCTCTCTGTCAGCCTCACTGCAGATATAAGCACG
AGATGATGCACTTTACAATCAGCTTTCACAAGGGAGATTGACTCAAATGT
GCCCACTGTATCTTTACATAGGTGTTGAGCATGCCCGTGCATCACTTGGA
CGGCAAGAATGTGGAGCCGAAGGTGGCTGTGCCGAGGAAGACCAATCCCA
AATTGGTGATGCGCACCAAGAAAATCTTTGTGGGCGGGCTCTCGGCCACC
ACGAGTCTGGAGGATGTCAAGGCCTACTTTGAGCAGTTCAGCAAGGTCAA
GGACGCCATGCTGGCCTACGACAAGGTCACCAATCGGCACCGCGGCTTCG
GCTTCGTCACCTTCGACAACGACGAGGTGGTGGACAAGATTTGCGAGATC
CACTTTCACGAGATCAACGGTGAGTTTGGCACCTCTGACCACATCTAGCT
AGGAGCCATGGATGACTCAAAGGTTGTAGAGTCTGTCCTTGGCCGAATCC
CAAACTTTGGCTCAATCAACTCGTACTTTATTGCGTGAGCAAAGTAAGGC
ATCGAAATAACGGCAACTAGACCGCGGGAAAGTAAGAAAATTGTACGAAA
TTGCCTAAATCTAGGCTAAAGTAGATCATGTCCACCTAGAAAACCGAGCT
ATCGTCGGTGTACCTTGCAGAAAAACGGATAACAGCCCGGACCTAGCCAC
CCGTCAATGCATAGATGGCTTTTAAGTGACACATAATTAAGTGGCTTAAA
TCGAAAGTAGAACGATCTATGCTCAGGGCTTGAATCTTTCGGCTCTTCCT
GACCTCTCCCCCCTCCCGTTTGCCTCTGTTTCCAGGCAAAATGGTGGAGA
GCAAGAAGGCCCTGCCCAAGGAGCCGCGTGGCGGCTACGGGGCCTACCAC
CCCGGTGGGGCTCATCCCCTCTATTCCAATTACTTCACCTCCAATCAGAC
CCAGCCCTTGGGCTCGTACGGCTCGGGCGGGGGCGGGGGTGCCTACCCCA
TGGTGAGCAATGGAGGAGGCCACCCTCGGGAGGCCAACGTGTACTCCACC
CGCTATCATGCCATCTCCGGCTACAACCAAAACTTCGGCGGAGGAGGCGG
TGGGAGCCACGGAGGAGGCAGTGGGCGTGGCGTGAACAACAATAACGAGC
CCACCCTCGGCGGCAGCTACGACAGCTACAACGGGAACCGCTACGAGTCG
GCCGGCTCGTCGGGCGGTTCCTCGGGGGGTGGTGACTTCATGGGCACGCC
CCTTATGAACCAGGGCAACAAGGCCGCCGGCCTGGCCACGCACAGCGACT
CCAAATACAACCAGTACTTGAACGACCGCAATTACGGCATGTTCTCCTCC
TCGGCGGCCTTGAGCGGTGGTGCGGCCTCGAATCACGTGCTGGGCGGCCT
CAGGCGGGACAGCCCCTACCTGGAGACCGGTTCGACCGGCGACAACCTGG
ACGACTTTCCCCCTCTCAACAACAACAGCAACGGGAACAACAACCGCAAT
AGCCTGGTCTCGTTCTGAAGCTGCTACATCGACCAACGCCTCCACCACCC
CCGCGTGTGAGTGTGTGGAGCCCACACACGCCCTCTTCTCTCTCAAAATC
TCATCGTAAATACAACCTTCTCTATCCTGGCTGCCCGGGAGTGTGCTGCG
GGCCCTCTGCCCAAGGCCTGATGCTGTGACTACCAAGTAGAAATAGTTTG
CTTTCTCTCCTCCTCCTCCGGTCTCGCGTGAGCCACCACGCCCCTCGGCC
TCATTTGGAGTCCTGCCTACTGAGCCGCACTTGCTACGAATCGATCGGCA
TGCCAATGATGACTCACTCGTTTGGCTTCTTGCTCCTAAAGAAGACCCTC
TATGACCTAAATGTAATTTGCTGTTAGAATACCGCCCCCCCCCTGCCCCG
CCCGCAGTCGGATCACAGTTGTCCCTGATTATACATACGATTATTATCAT
CCCATCCTCTACTCCCATTATCGTGATGATATGTGTCCACGTGTGACTGT
AGTTGTTGTTTGTCCATGATTCTCCGCTTTCAATTACGTTCCACCTCCGC
CACTAATATTAATAGACCCGTTGGACAGCCCCCATTCTAGTAGTAGAAGA
TTCCCTCAGTTGATTGAATGTATTTTGGCCCCATCCCGCCCCCCCAATCA
TACCTACTACGATTACTACACAACTACAAC

Synonyms

The feature 'rna-binding protein musashi homolog rbp6 isoform x6' has the following synonyms


Synonym
Tk09763

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