EMLSAG00000005342, EMLSAG00000005342-688108 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000005342
Unique Name	EMLSAG00000005342-688108
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000005342 vs. GO
Match: - (symbol:zgc:110796 "zgc:110796" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-050306-36 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 HOVERGEN:HBG107480 KO:K14411 GeneTree:ENSGT00730000110584 TreeFam:TF319527 EMBL:CABZ01074485 EMBL:BC090772 RefSeq:NP_001013351.1 UniGene:Dr.87721 STRING:7955.ENSDARP00000060531 Ensembl:ENSDART00000060532 GeneID:503755 KEGG:dre:503755 eggNOG:NOG285314 InParanoid:Q5CZN9 OMA:MEADGTQ OrthoDB:EOG722JFC NextBio:20866299 Uniprot:Q5CZN9)

HSP 1 Score: 77.7962 bits (190), Expect = 1.635e-18
Identity = 32/50 (64.00%), Postives = 38/50 (76.00%), Query Frame = 0

Query:    3 DLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            D  KMFIGGLSWQTT EGLKEYFC FG++ E MVM+DP T+RS     ++
Sbjct:   20 DPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVT 69

[Close]

BLAST of EMLSAG00000005342 vs. GO
Match: - (symbol:msi1 "musashi homolog 1 (Drosophila)" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND] [GO:0007417 "central nervous system development" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-050320-86 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0007417 GO:GO:0003676 EMBL:AB698464 UniGene:Dr.36054 Uniprot:J4C3V8)

HSP 1 Score: 77.0258 bits (188), Expect = 5.276e-17
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0

Query:    3 DLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            D  KMFIGGLSWQTT EGLK+YFC FG++ E MVM+DP T+RS     ++
Sbjct:   18 DPCKMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVT 67

HSP 2 Score: 46.2098 bits (108), Expect = 6.432e-6
Identity = 20/47 (42.55%), Postives = 29/47 (61.70%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  TT E +K+YF  FG + + M+M D TT R      ++
Sbjct:  110 KIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVT 156

[Close]

BLAST of EMLSAG00000005342 vs. GO
Match: - (symbol:msi2a "musashi homolog 2a (Drosophila)" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-030826-25 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411 OrthoDB:EOG715Q6V GeneTree:ENSGT00730000110584 TreeFam:TF325419 EMBL:CR931799 EMBL:CR931806 EMBL:BC045335 EMBL:BC164813 RefSeq:NP_997961.1 RefSeq:XP_005169204.1 UniGene:Dr.32677 STRING:7955.ENSDARP00000090247 Ensembl:ENSDART00000099473 Ensembl:ENSDART00000132096 GeneID:100002680 KEGG:dre:100002680 CTD:100002680 InParanoid:Q7ZW10 OMA:FLHNETH NextBio:20785547 Uniprot:Q7ZW10)

HSP 1 Score: 77.0258 bits (188), Expect = 7.988e-17
Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+P+ L++YFC FG+I E MVM+DPTT+RS     I+
Sbjct:   22 KMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFIT 68

HSP 2 Score: 45.0542 bits (105), Expect = 1.899e-5
Identity = 19/47 (40.43%), Postives = 28/47 (59.57%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  T  E +K+YF  FG + + M+M D TT R      ++
Sbjct:  111 KIFVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVT 157

[Close]

BLAST of EMLSAG00000005342 vs. GO
Match: - (symbol:Rbp6 "RNA-binding protein 6" species:7227 "Drosophila melanogaster" [GO:0003729 "mRNA binding" evidence=NAS] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 EMBL:AE014296 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005844 eggNOG:COG0724 KO:K14411 OrthoDB:EOG715Q6V GeneTree:ENSGT00730000110584 GO:GO:0048864 EMBL:AY122226 EMBL:S51715 PIR:F48110 RefSeq:NP_001097631.1 RefSeq:NP_001097632.1 RefSeq:NP_730245.2 UniGene:Dm.22292 ProteinModelPortal:Q9VVE5 SMR:Q9VVE5 BioGrid:65211 DIP:DIP-19056N IntAct:Q9VVE5 MINT:MINT-918255 EnsemblMetazoa:FBtr0075285 GeneID:39919 KEGG:dme:Dmel_CG32169 UCSC:CG32169-RA CTD:39919 FlyBase:FBgn0260943 InParanoid:Q9VVE5 OMA:YGELVVW GenomeRNAi:39919 NextBio:816085 PRO:PR:Q9VVE5 Bgee:Q9VVE5 Uniprot:Q9VVE5)

HSP 1 Score: 76.6406 bits (187), Expect = 1.177e-16
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+PE L++YF  +GDI+E MVMKDPTTRRS     ++
Sbjct:   30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVT 76

HSP 2 Score: 43.8986 bits (102), Expect = 4.068e-5
Identity = 21/49 (42.86%), Postives = 28/49 (57.14%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLISNQ 54
            K+F+GGLS  TT E +K YF  FG I + M+M D  T R      ++ Q
Sbjct:  119 KIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQ 167

[Close]

BLAST of EMLSAG00000005342 vs. GO
Match: - (symbol:MSI2 "RNA-binding protein Musashi homolog 2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC005325 HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC007431 EMBL:AC015883 EMBL:AC091181 ProteinModelPortal:J3QKT5 SMR:J3QKT5 PRIDE:J3QKT5 Ensembl:ENST00000581776 NextBio:35536385 ArrayExpress:J3QKT5 Uniprot:J3QKT5)

HSP 1 Score: 71.633 bits (174), Expect = 4.593e-16
Identity = 29/50 (58.00%), Postives = 38/50 (76.00%), Query Frame = 0

Query:    3 DLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            D  KMFIGGLSWQT+P+ L++YF  FG+I E MVM+DPTT+RS     ++
Sbjct:   19 DPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVT 68

[Close]

BLAST of EMLSAG00000005342 vs. GO
Match: - (symbol:MSI2 "RNA-binding protein Musashi homolog 2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 EMBL:AC005325 HGNC:HGNC:18585 ChiTaRS:MSI2 EMBL:AC007431 EMBL:AC015883 EMBL:AC091181 ProteinModelPortal:J3KTC1 Ensembl:ENST00000579590 NextBio:35536166 ArrayExpress:J3KTC1 Uniprot:J3KTC1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.773e-15
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+P+ L++YF  FG+I E MVM+DPTT+RS     ++
Sbjct:   18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVT 64

[Close]

BLAST of EMLSAG00000005342 vs. GO
Match: - (symbol:MSI2 "RNA-binding protein Musashi homolog 2" species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266 "poly(U) RNA binding" evidence=IEA] [GO:0044822 "poly(A) RNA binding" evidence=IDA] [GO:0048864 "stem cell development" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005844 eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411 GO:GO:0048864 TreeFam:TF325419 EMBL:BC001526 EMBL:BC017560 EMBL:AK093888 RefSeq:NP_620412.1 RefSeq:NP_733839.1 UniGene:Hs.658922 ProteinModelPortal:Q96DH6 SMR:Q96DH6 BioGrid:125873 IntAct:Q96DH6 STRING:9606.ENSP00000284073 PhosphoSite:Q96DH6 DMDM:51316513 PaxDb:Q96DH6 PRIDE:Q96DH6 DNASU:124540 Ensembl:ENST00000284073 Ensembl:ENST00000322684 Ensembl:ENST00000579180 GeneID:124540 KEGG:hsa:124540 UCSC:uc002iuz.1 UCSC:uc002iva.3 CTD:124540 GeneCards:GC17P055334 HGNC:HGNC:18585 HPA:CAB022300 MIM:607897 neXtProt:NX_Q96DH6 PharmGKB:PA38590 InParanoid:Q96DH6 OMA:ISDCTIM PhylomeDB:Q96DH6 ChiTaRS:MSI2 GenomeRNAi:124540 NextBio:81316 PRO:PR:Q96DH6 ArrayExpress:Q96DH6 Bgee:Q96DH6 CleanEx:HS_MSI2 Genevestigator:Q96DH6 Uniprot:Q96DH6)

HSP 1 Score: 72.4034 bits (176), Expect = 2.125e-15
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+P+ L++YF  FG+I E MVM+DPTT+RS     ++
Sbjct:   22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVT 68

HSP 2 Score: 45.0542 bits (105), Expect = 1.586e-5
Identity = 19/47 (40.43%), Postives = 28/47 (59.57%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  T  E +K+YF  FG + + M+M D TT R      ++
Sbjct:  111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVT 157

[Close]

BLAST of EMLSAG00000005342 vs. GO
Match: - (symbol:Msi2 "musashi RNA-binding protein 2" species:10090 "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003727 "single-stranded RNA binding" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005844 "polysome" evidence=IDA] [GO:0008266 "poly(U) RNA binding" evidence=IDA] [GO:0044822 "poly(A) RNA binding" evidence=ISO] [GO:0048864 "stem cell development" evidence=IMP] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 MGI:MGI:1923876 GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0005844 eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411 OrthoDB:EOG715Q6V GeneTree:ENSGT00730000110584 GO:GO:0048864 CTD:124540 ChiTaRS:MSI2 EMBL:AB056102 EMBL:AB056103 EMBL:BK001483 EMBL:AK049637 EMBL:AK049688 EMBL:AK051269 RefSeq:NP_473384.1 RefSeq:XP_006534505.1 RefSeq:XP_006536532.1 UniGene:Mm.400451 UniGene:Mm.428433 UniGene:Mm.474737 ProteinModelPortal:Q920Q6 SMR:Q920Q6 IntAct:Q920Q6 MINT:MINT-4102465 PhosphoSite:Q920Q6 PaxDb:Q920Q6 PRIDE:Q920Q6 Ensembl:ENSMUST00000092794 Ensembl:ENSMUST00000107909 GeneID:76626 KEGG:mmu:76626 UCSC:uc007kvl.2 UCSC:uc007kvn.2 InParanoid:Q920Q6 OMA:YNSSAGD NextBio:345476 PRO:PR:Q920Q6 ArrayExpress:Q920Q6 Bgee:Q920Q6 CleanEx:MM_MSI2 Genevestigator:Q920Q6 Uniprot:Q920Q6)

HSP 1 Score: 72.4034 bits (176), Expect = 2.617e-15
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+P+ L++YF  FG+I E MVM+DPTT+RS     ++
Sbjct:   22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVT 68

HSP 2 Score: 45.0542 bits (105), Expect = 1.666e-5
Identity = 19/47 (40.43%), Postives = 28/47 (59.57%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  T  E +K+YF  FG + + M+M D TT R      ++
Sbjct:  111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVT 157

[Close]

BLAST of EMLSAG00000005342 vs. GO
Match: - (symbol:msi2b "musashi homolog 2b (Drosophila)" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 ZFIN:ZDB-GENE-040426-1268 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411 GeneTree:ENSGT00730000110584 TreeFam:TF325419 EMBL:BX000438 EMBL:BX510988 EMBL:BX649247 EMBL:CR848815 EMBL:BC055251 RefSeq:NP_957403.1 RefSeq:XP_005157737.1 RefSeq:XP_005157738.1 UniGene:Dr.82489 Ensembl:ENSDART00000100194 GeneID:394084 KEGG:dre:394084 CTD:394084 InParanoid:Q7SXT6 OMA:DYGFYSS NextBio:20815041 PRO:PR:Q7SXT6 Uniprot:Q7SXT6)

HSP 1 Score: 72.4034 bits (176), Expect = 4.302e-15
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+P+ L++YF  FG+I E MVM+DPTT+RS     ++
Sbjct:   22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVT 68

HSP 2 Score: 45.0542 bits (105), Expect = 1.895e-5
Identity = 19/47 (40.43%), Postives = 28/47 (59.57%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  T  E +K+YF  FG + + M+M D TT R      ++
Sbjct:  111 KIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVT 157

[Close]

BLAST of EMLSAG00000005342 vs. GO
Match: - (symbol:Msi1 "RNA-binding protein Musashi homolog 1" species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005844 "polysome" evidence=IEA] [GO:0008266 "poly(U) RNA binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360 RGD:628778 GO:GO:0005634 GO:GO:0005737 GO:GO:0008266 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0030855 GO:GO:0009725 GO:GO:0005844 eggNOG:COG0724 HOGENOM:HOG000234441 HOVERGEN:HBG002295 KO:K14411 CTD:4440 EMBL:AY043393 RefSeq:NP_683688.1 UniGene:Rn.162146 ProteinModelPortal:Q8K3P4 SMR:Q8K3P4 STRING:10116.ENSRNOP00000001532 PhosphoSite:Q8K3P4 PaxDb:Q8K3P4 PRIDE:Q8K3P4 GeneID:259272 KEGG:rno:259272 NextBio:624325 PRO:PR:Q8K3P4 Genevestigator:Q8K3P4 Uniprot:Q8K3P4)

HSP 1 Score: 71.633 bits (174), Expect = 6.538e-15
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 0

Query:    3 DLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            D  KMFIGGLSWQTT EGL+EYF  FG++ E +VM+DP T+RS     ++
Sbjct:   18 DPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67

HSP 2 Score: 45.4394 bits (106), Expect = 1.079e-5
Identity = 20/47 (42.55%), Postives = 28/47 (59.57%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  TT E +K YF  FG + + M+M D TT R      ++
Sbjct:  110 KIFVGGLSVNTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVT 156

[Close]

BLAST of EMLSAG00000005342 vs. C. finmarchicus
Match: gi|592833098|gb|GAXK01124446.1| (TSA: Calanus finmarchicus comp24322_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 86.2705 bits (212), Expect = 8.642e-20
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQTTPEGLKEYF  FG+IAEVMVMKDPTTRRS     ++
Sbjct:  465 KMFIGGLSWQTTPEGLKEYFSKFGEIAEVMVMKDPTTRRSRGFGFVT 605

HSP 2 Score: 43.1282 bits (100), Expect = 4.240e-5
Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  TT E +K YF  FG I + M+M D  T R      ++
Sbjct:  732 KIFVGGLSAPTTLEDVKNYFEQFGRIEDAMLMFDKQTNRHRGFGFVT 872

[Close]

BLAST of EMLSAG00000005342 vs. C. finmarchicus
Match: gi|592833088|gb|GAXK01124456.1| (TSA: Calanus finmarchicus comp24322_c2_seq11 transcribed RNA sequence)

HSP 1 Score: 85.8853 bits (211), Expect = 9.247e-20
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQTTPEGLKEYF  FG+IAEVMVMKDPTTRRS     ++
Sbjct:  465 KMFIGGLSWQTTPEGLKEYFSKFGEIAEVMVMKDPTTRRSRGFGFVT 605

HSP 2 Score: 43.1282 bits (100), Expect = 4.376e-5
Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  TT E +K YF  FG I + M+M D  T R      ++
Sbjct:  732 KIFVGGLSAPTTLEDVKNYFEQFGRIEDAMLMFDKQTNRHRGFGFVT 872

[Close]

BLAST of EMLSAG00000005342 vs. C. finmarchicus
Match: gi|592833093|gb|GAXK01124451.1| (TSA: Calanus finmarchicus comp24322_c2_seq6 transcribed RNA sequence)

HSP 1 Score: 85.8853 bits (211), Expect = 9.365e-20
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQTTPEGLKEYF  FG+IAEVMVMKDPTTRRS     ++
Sbjct:  465 KMFIGGLSWQTTPEGLKEYFSKFGEIAEVMVMKDPTTRRSRGFGFVT 605

HSP 2 Score: 43.1282 bits (100), Expect = 4.395e-5
Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  TT E +K YF  FG I + M+M D  T R      ++
Sbjct:  732 KIFVGGLSAPTTLEDVKNYFEQFGRIEDAMLMFDKQTNRHRGFGFVT 872

[Close]

BLAST of EMLSAG00000005342 vs. C. finmarchicus
Match: gi|592833086|gb|GAXK01124458.1| (TSA: Calanus finmarchicus comp24322_c2_seq13 transcribed RNA sequence)

HSP 1 Score: 85.8853 bits (211), Expect = 1.004e-19
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQTTPEGLKEYF  FG+IAEVMVMKDPTTRRS     ++
Sbjct:  426 KMFIGGLSWQTTPEGLKEYFSKFGEIAEVMVMKDPTTRRSRGFGFVT 566

HSP 2 Score: 43.1282 bits (100), Expect = 4.492e-5
Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  TT E +K YF  FG I + M+M D  T R      ++
Sbjct:  693 KIFVGGLSAPTTLEDVKNYFEQFGRIEDAMLMFDKQTNRHRGFGFVT 833

[Close]

BLAST of EMLSAG00000005342 vs. C. finmarchicus
Match: gi|592833097|gb|GAXK01124447.1| (TSA: Calanus finmarchicus comp24322_c2_seq2 transcribed RNA sequence)

HSP 1 Score: 85.8853 bits (211), Expect = 1.016e-19
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQTTPEGLKEYF  FG+IAEVMVMKDPTTRRS     ++
Sbjct:  426 KMFIGGLSWQTTPEGLKEYFSKFGEIAEVMVMKDPTTRRSRGFGFVT 566

HSP 2 Score: 43.1282 bits (100), Expect = 4.557e-5
Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  TT E +K YF  FG I + M+M D  T R      ++
Sbjct:  693 KIFVGGLSAPTTLEDVKNYFEQFGRIEDAMLMFDKQTNRHRGFGFVT 833

[Close]

BLAST of EMLSAG00000005342 vs. C. finmarchicus
Match: gi|592833090|gb|GAXK01124454.1| (TSA: Calanus finmarchicus comp24322_c2_seq9 transcribed RNA sequence)

HSP 1 Score: 85.8853 bits (211), Expect = 1.017e-19
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQTTPEGLKEYF  FG+IAEVMVMKDPTTRRS     ++
Sbjct:  426 KMFIGGLSWQTTPEGLKEYFSKFGEIAEVMVMKDPTTRRSRGFGFVT 566

HSP 2 Score: 43.1282 bits (100), Expect = 4.511e-5
Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  TT E +K YF  FG I + M+M D  T R      ++
Sbjct:  693 KIFVGGLSAPTTLEDVKNYFEQFGRIEDAMLMFDKQTNRHRGFGFVT 833

[Close]

BLAST of EMLSAG00000005342 vs. C. finmarchicus
Match: gi|592833089|gb|GAXK01124455.1| (TSA: Calanus finmarchicus comp24322_c2_seq10 transcribed RNA sequence)

HSP 1 Score: 85.8853 bits (211), Expect = 1.049e-19
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQTTPEGLKEYF  FG+IAEVMVMKDPTTRRS     ++
Sbjct:  465 KMFIGGLSWQTTPEGLKEYFSKFGEIAEVMVMKDPTTRRSRGFGFVT 605

HSP 2 Score: 42.743 bits (99), Expect = 4.582e-5
Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  TT E +K YF  FG I + M+M D  T R      ++
Sbjct:  732 KIFVGGLSAPTTLEDVKNYFEQFGRIEDAMLMFDKQTNRHRGFGFVT 872

[Close]

BLAST of EMLSAG00000005342 vs. C. finmarchicus
Match: gi|592833094|gb|GAXK01124450.1| (TSA: Calanus finmarchicus comp24322_c2_seq5 transcribed RNA sequence)

HSP 1 Score: 85.8853 bits (211), Expect = 1.062e-19
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQTTPEGLKEYF  FG+IAEVMVMKDPTTRRS     ++
Sbjct:  465 KMFIGGLSWQTTPEGLKEYFSKFGEIAEVMVMKDPTTRRSRGFGFVT 605

HSP 2 Score: 42.743 bits (99), Expect = 4.601e-5
Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  TT E +K YF  FG I + M+M D  T R      ++
Sbjct:  732 KIFVGGLSAPTTLEDVKNYFEQFGRIEDAMLMFDKQTNRHRGFGFVT 872

[Close]

BLAST of EMLSAG00000005342 vs. C. finmarchicus
Match: gi|592833087|gb|GAXK01124457.1| (TSA: Calanus finmarchicus comp24322_c2_seq12 transcribed RNA sequence)

HSP 1 Score: 85.8853 bits (211), Expect = 1.107e-19
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQTTPEGLKEYF  FG+IAEVMVMKDPTTRRS     ++
Sbjct:  426 KMFIGGLSWQTTPEGLKEYFSKFGEIAEVMVMKDPTTRRSRGFGFVT 566

HSP 2 Score: 42.743 bits (99), Expect = 4.745e-5
Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  TT E +K YF  FG I + M+M D  T R      ++
Sbjct:  693 KIFVGGLSAPTTLEDVKNYFEQFGRIEDAMLMFDKQTNRHRGFGFVT 833

[Close]

BLAST of EMLSAG00000005342 vs. C. finmarchicus
Match: gi|592833092|gb|GAXK01124452.1| (TSA: Calanus finmarchicus comp24322_c2_seq7 transcribed RNA sequence)

HSP 1 Score: 85.8853 bits (211), Expect = 1.121e-19
Identity = 37/47 (78.72%), Postives = 40/47 (85.11%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQTTPEGLKEYF  FG+IAEVMVMKDPTTRRS     ++
Sbjct:  426 KMFIGGLSWQTTPEGLKEYFSKFGEIAEVMVMKDPTTRRSRGFGFVT 566

HSP 2 Score: 42.743 bits (99), Expect = 4.766e-5
Identity = 20/47 (42.55%), Postives = 27/47 (57.45%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLS  TT E +K YF  FG I + M+M D  T R      ++
Sbjct:  693 KIFVGGLSAPTTLEDVKNYFEQFGRIEDAMLMFDKQTNRHRGFGFVT 833

[Close]

BLAST of EMLSAG00000005342 vs. L. salmonis peptides
Match: EMLSAP00000005342 (pep:novel supercontig:LSalAtl2s:LSalAtl2s287:336138:336664:-1 gene:EMLSAG00000005342 transcript:EMLSAT00000005342 description:"snap-LSalAtl2s287-processed-gene-3.10")

HSP 1 Score: 153.295 bits (386), Expect = 8.996e-50
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0

Query:    1 MKDLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLISNQIRVQDNKYNTSFILEIKKF 73
            MKDLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLISNQIRVQDNKYNTSFILEIKKF
Sbjct:    1 MKDLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLISNQIRVQDNKYNTSFILEIKKF 73

[Close]

BLAST of EMLSAG00000005342 vs. L. salmonis peptides
Match: EMLSAP00000006940 (pep:novel supercontig:LSalAtl2s:LSalAtl2s393:593053:595744:-1 gene:EMLSAG00000006940 transcript:EMLSAT00000006940 description:"maker-LSalAtl2s393-snap-gene-5.57")

HSP 1 Score: 80.4925 bits (197), Expect = 3.655e-20
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQTTPE ++EYF  FGD+AEVMVMKDP TRRS     I+
Sbjct:   30 KMFIGGLSWQTTPEXIREYFSQFGDLAEVMVMKDPATRRSRGFGFIT 76

[Close]

BLAST of EMLSAG00000005342 vs. L. salmonis peptides
Match: EMLSAP00000000160 (pep:novel supercontig:LSalAtl2s:LSalAtl2s1025:101799:103083:1 gene:EMLSAG00000000160 transcript:EMLSAT00000000160 description:"maker-LSalAtl2s1025-augustus-gene-0.45")

HSP 1 Score: 51.6026 bits (122), Expect = 3.022e-9
Identity = 20/47 (42.55%), Postives = 34/47 (72.34%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGL++ TT +GLK+YF  +G++ +++VM  P TRRS     ++
Sbjct:   16 KLFLGGLNYSTTEDGLKKYFEKYGELVDIVVMXFPDTRRSRGFGFVT 62

[Close]

BLAST of EMLSAG00000005342 vs. L. salmonis peptides
Match: EMLSAP00000006441 (pep:novel supercontig:LSalAtl2s:LSalAtl2s351:658541:663148:1 gene:EMLSAG00000006441 transcript:EMLSAT00000006441 description:"maker-LSalAtl2s351-snap-gene-6.33")

HSP 1 Score: 49.6766 bits (117), Expect = 1.252e-8
Identity = 20/47 (42.55%), Postives = 30/47 (63.83%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLSW TT E L  YF  FG++ + +VMK+  + RS     ++
Sbjct:   42 KLFVGGLSWDTTQETLLRYFGGFGEVIDCVVMKNAESGRSRGFGFVT 88

[Close]

BLAST of EMLSAG00000005342 vs. L. salmonis peptides
Match: EMLSAP00000007863 (pep:novel supercontig:LSalAtl2s:LSalAtl2s460:94042:141135:-1 gene:EMLSAG00000007863 transcript:EMLSAT00000007863 description:"maker-LSalAtl2s460-augustus-gene-1.7")

HSP 1 Score: 47.7506 bits (112), Expect = 6.324e-8
Identity = 17/28 (60.71%), Postives = 23/28 (82.14%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAE 33
            K+F+GGLSWQTTP+ L+EYF  FG + +
Sbjct:   52 KLFVGGLSWQTTPDKLREYFGQFGSVTD 79

[Close]

BLAST of EMLSAG00000005342 vs. L. salmonis peptides
Match: EMLSAP00000008938 (pep:novel supercontig:LSalAtl2s:LSalAtl2s556:241652:266229:-1 gene:EMLSAG00000008938 transcript:EMLSAT00000008938 description:"maker-LSalAtl2s556-snap-gene-2.16")

HSP 1 Score: 44.669 bits (104), Expect = 4.846e-7
Identity = 20/49 (40.82%), Postives = 31/49 (63.27%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLISNQ 54
            K+F+GGL + TT + L+E+F  FG+I E +V+ D TT +S     +  Q
Sbjct:   53 KLFVGGLPYHTTDKSLREHFEVFGEIEEAVVITDRTTGKSRGYGFVIMQ 101

[Close]

BLAST of EMLSAG00000005342 vs. SwissProt
Match: gi|75027590|sp|Q9VVE5.3|MSIR6_DROME (RecName: Full=RNA-binding protein Musashi homolog Rbp6)

HSP 1 Score: 76.6406 bits (187), Expect = 3.466e-17
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+PE L++YF  +GDI+E MVMKDPTTRRS     ++
Sbjct:   30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVT 76

[Close]

BLAST of EMLSAG00000005342 vs. SwissProt
Match: gi|51316513|sp|Q96DH6.1|MSI2H_HUMAN (RecName: Full=RNA-binding protein Musashi homolog 2; Short=Musashi-2)

HSP 1 Score: 72.4034 bits (176), Expect = 7.439e-16
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+P+ L++YF  FG+I E MVM+DPTT+RS     ++
Sbjct:   22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVT 68

[Close]

BLAST of EMLSAG00000005342 vs. SwissProt
Match: gi|51316506|sp|Q920Q6.1|MSI2H_MOUSE (RecName: Full=RNA-binding protein Musashi homolog 2; Short=Musashi-2)

HSP 1 Score: 72.4034 bits (176), Expect = 8.214e-16
Identity = 28/47 (59.57%), Postives = 37/47 (78.72%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+P+ L++YF  FG+I E MVM+DPTT+RS     ++
Sbjct:   22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVT 68

[Close]

BLAST of EMLSAG00000005342 vs. SwissProt
Match: gi|51316134|sp|Q8K3P4.1|MSI1H_RAT (RecName: Full=RNA-binding protein Musashi homolog 1; Short=Musashi-1)

HSP 1 Score: 71.633 bits (174), Expect = 1.847e-15
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 0

Query:    3 DLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            D  KMFIGGLSWQTT EGL+EYF  FG++ E +VM+DP T+RS     ++
Sbjct:   18 DPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67

[Close]

BLAST of EMLSAG00000005342 vs. SwissProt
Match: gi|51316193|sp|O43347.1|MSI1H_HUMAN (RecName: Full=RNA-binding protein Musashi homolog 1; Short=Musashi-1)

HSP 1 Score: 71.633 bits (174), Expect = 1.847e-15
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 0

Query:    3 DLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            D  KMFIGGLSWQTT EGL+EYF  FG++ E +VM+DP T+RS     ++
Sbjct:   18 DPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67

[Close]

BLAST of EMLSAG00000005342 vs. SwissProt
Match: gi|51316207|sp|Q61474.1|MSI1H_MOUSE (RecName: Full=RNA-binding protein Musashi homolog 1; Short=Musashi-1)

HSP 1 Score: 71.633 bits (174), Expect = 1.847e-15
Identity = 29/50 (58.00%), Postives = 37/50 (74.00%), Query Frame = 0

Query:    3 DLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            D  KMFIGGLSWQTT EGL+EYF  FG++ E +VM+DP T+RS     ++
Sbjct:   18 DPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVT 67

[Close]

BLAST of EMLSAG00000005342 vs. SwissProt
Match: gi|2500574|sp|Q99383.1|HRP1_YEAST (RecName: Full=Nuclear polyadenylated RNA-binding protein 4; AltName: Full=Cleavage factor IB; Short=CFIB)

HSP 1 Score: 58.5362 bits (140), Expect = 8.776e-11
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0

Query:    2 KDLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+  KMFIGGL+W TT + L+EYF  +G + ++ +MKDP T RS     +S
Sbjct:  156 KESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLS 206

[Close]

BLAST of EMLSAG00000005342 vs. SwissProt
Match: gi|76803817|sp|P48809.2|RB27C_DROME (RecName: Full=Heterogeneous nuclear ribonucleoprotein 27C; Short=Hrb27-C; AltName: Full=HRP48.1; AltName: Full=hnRNP 48)

HSP 1 Score: 58.151 bits (139), Expect = 1.266e-10
Identity = 23/47 (48.94%), Postives = 32/47 (68.09%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLSW+TT E L  YFC FGDI + +VMK+  + RS     ++
Sbjct:    8 KLFVGGLSWETTQENLSRYFCRFGDIIDCVVMKNNESGRSRGFGFVT 54

[Close]

BLAST of EMLSAG00000005342 vs. SwissProt
Match: gi|78099792|sp|P48810.2|RB87F_DROME (RecName: Full=Heterogeneous nuclear ribonucleoprotein 87F; AltName: Full=HRP36.1 protein; AltName: Full=Protein P11)

HSP 1 Score: 58.151 bits (139), Expect = 1.419e-10
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0

Query:    4 LVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            L K+FIGGL ++TT +GLK +F  +G+I +V+VMKDP T+RS     I+
Sbjct:   23 LRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFIT 71

[Close]

BLAST of EMLSAG00000005342 vs. SwissProt
Match: gi|133256|sp|P21522.1|ROA1_SCHAM (RecName: Full=Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog)

HSP 1 Score: 56.9954 bits (136), Expect = 2.776e-10
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+FIGGL ++TT E LK++F  +G+I +V+VMKDP T+RS     I+
Sbjct:   18 KLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFIT 64

[Close]

BLAST of EMLSAG00000005342 vs. Select Arthropod Genomes
Match: gb|KFM69908.1| (RNA-binding protein Musashi-like protein, partial [Stegodyphus mimosarum])

HSP 1 Score: 78.9518 bits (193), Expect = 9.975e-21
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0

Query:    2 KDLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRS 45
             D  KMF+GGLSWQT PEGL+EYF  FG+I EVMVMKDPTTRRS
Sbjct:   20 HDPGKMFVGGLSWQTAPEGLREYFSKFGEITEVMVMKDPTTRRS 63

[Close]

BLAST of EMLSAG00000005342 vs. Select Arthropod Genomes
Match: XP_003249817.3 (PREDICTED: RNA-binding protein Musashi homolog Rbp6-like isoform X1 [Apis mellifera])

HSP 1 Score: 80.1073 bits (196), Expect = 1.644e-20
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = 0

Query:    3 DLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            D  KMFIGGLSWQT+PE L+EYF  +GDI EVMVMKDPTTRRS     I+
Sbjct:   20 DPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFIT 69

[Close]

BLAST of EMLSAG00000005342 vs. Select Arthropod Genomes
Match: XP_016766348.1 (PREDICTED: RNA-binding protein Musashi homolog Rbp6-like isoform X2 [Apis mellifera])

HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-20
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+PE L+EYF  +GDI EVMVMKDPTTRRS     I+
Sbjct:    3 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFIT 49

[Close]

BLAST of EMLSAG00000005342 vs. Select Arthropod Genomes
Match: EFX73024.1 (hypothetical protein DAPPUDRAFT_32116, partial [Daphnia pulex])

HSP 1 Score: 79.7221 bits (195), Expect = 1.205e-19
Identity = 33/47 (70.21%), Postives = 38/47 (80.85%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+ EGL+EYF  FGD+ EVMVMKDPTTRRS     ++
Sbjct:    3 KMFIGGLSWQTSAEGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVT 49

[Close]

BLAST of EMLSAG00000005342 vs. Select Arthropod Genomes
Match: ABW08559.1 (RNA-binding protein 6, isoform B [Drosophila melanogaster])

HSP 1 Score: 77.411 bits (189), Expect = 1.027e-17
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+PE L++YF  +GDI+E MVMKDPTTRRS     ++
Sbjct:   30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVT 76

[Close]

BLAST of EMLSAG00000005342 vs. Select Arthropod Genomes
Match: AGB94672.1 (RNA-binding protein 6, isoform G [Drosophila melanogaster])

HSP 1 Score: 77.0258 bits (188), Expect = 1.146e-17
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+PE L++YF  +GDI+E MVMKDPTTRRS     ++
Sbjct:   30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVT 76

[Close]

BLAST of EMLSAG00000005342 vs. Select Arthropod Genomes
Match: AAF49366.3 (RNA-binding protein 6, isoform A [Drosophila melanogaster])

HSP 1 Score: 76.6406 bits (187), Expect = 1.680e-17
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+PE L++YF  +GDI+E MVMKDPTTRRS     ++
Sbjct:   30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVT 76

[Close]

BLAST of EMLSAG00000005342 vs. Select Arthropod Genomes
Match: AGB96341.1 (musashi, isoform H [Drosophila melanogaster])

HSP 1 Score: 65.0846 bits (157), Expect = 2.411e-13
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLISNQ 54
            K+F+GGLSWQT+ + LKEYF  FG + +V++MKDP T+RS     I+ Q
Sbjct:  137 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ 185

[Close]

BLAST of EMLSAG00000005342 vs. Select Arthropod Genomes
Match: AFH06621.1 (musashi, isoform D [Drosophila melanogaster])

HSP 1 Score: 65.0846 bits (157), Expect = 2.418e-13
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLISNQ 54
            K+F+GGLSWQT+ + LKEYF  FG + +V++MKDP T+RS     I+ Q
Sbjct:  175 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ 223

[Close]

BLAST of EMLSAG00000005342 vs. Select Arthropod Genomes
Match: AAF56478.2 (musashi, isoform A [Drosophila melanogaster])

HSP 1 Score: 65.0846 bits (157), Expect = 2.418e-13
Identity = 26/49 (53.06%), Postives = 36/49 (73.47%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLISNQ 54
            K+F+GGLSWQT+ + LKEYF  FG + +V++MKDP T+RS     I+ Q
Sbjct:  176 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQ 224

[Close]

BLAST of EMLSAG00000005342 vs. nr
Match: gi|1067077218|ref|XP_018022219.1| (PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial [Hyalella azteca])

HSP 1 Score: 83.9593 bits (206), Expect = 1.863e-19
Identity = 37/50 (74.00%), Postives = 40/50 (80.00%), Query Frame = 0

Query:    3 DLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            D  KMFIGGLSWQTT EGL+EYFC FGDI EVMVMKDPTTRRS     ++
Sbjct:   22 DPGKMFIGGLSWQTTAEGLREYFCKFGDINEVMVMKDPTTRRSRGFGFVT 71

[Close]

BLAST of EMLSAG00000005342 vs. nr
Match: gi|1009563976|ref|XP_015914874.1| (PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Parasteatoda tepidariorum])

HSP 1 Score: 81.6481 bits (200), Expect = 1.500e-18
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = 0

Query:    3 DLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            D  KMFIGGLSWQT PEGL+EYF  +GDI EVMVMKDPTTRRS     ++
Sbjct:   18 DPGKMFIGGLSWQTAPEGLREYFSKYGDITEVMVMKDPTTRRSRGFGFVT 67

[Close]

BLAST of EMLSAG00000005342 vs. nr
Match: gi|328704118|ref|XP_003242409.1| (PREDICTED: RNA-binding protein Musashi homolog Rbp6 [Acyrthosiphon pisum])

HSP 1 Score: 82.0333 bits (201), Expect = 3.633e-18
Identity = 37/59 (62.71%), Postives = 47/59 (79.66%), Query Frame = 0

Query:    3 DLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLISNQIRVQDNK 61
            D  KMFIGGLSWQT+PE L+EYF  FG+I EVMVMKDPTTRRSS ++ +++Q    +N+
Sbjct:   19 DPGKMFIGGLSWQTSPESLREYFSKFGEITEVMVMKDPTTRRSSRVA-VADQTAGNENE 76

[Close]

BLAST of EMLSAG00000005342 vs. nr
Match: gi|675377006|gb|KFM69908.1| (RNA-binding protein Musashi-like protein, partial [Stegodyphus mimosarum])

HSP 1 Score: 78.9518 bits (193), Expect = 4.881e-18
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0

Query:    2 KDLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRS 45
             D  KMF+GGLSWQT PEGL+EYF  FG+I EVMVMKDPTTRRS
Sbjct:   20 HDPGKMFVGGLSWQTAPEGLREYFSKFGEITEVMVMKDPTTRRS 63

[Close]

BLAST of EMLSAG00000005342 vs. nr
Match: gi|1009531258|ref|XP_015930952.1| (PREDICTED: RNA-binding protein Musashi homolog 2-like [Parasteatoda tepidariorum])

HSP 1 Score: 79.337 bits (194), Expect = 5.547e-18
Identity = 34/44 (77.27%), Postives = 37/44 (84.09%), Query Frame = 0

Query:    2 KDLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRS 45
             D  KMF+GGLSWQT PEGL+EYF  FG+I EVMVMKDPTTRRS
Sbjct:   21 HDPGKMFVGGLSWQTAPEGLREYFSKFGEITEVMVMKDPTTRRS 64

[Close]

BLAST of EMLSAG00000005342 vs. nr
Match: gi|1032015703|ref|XP_003249817.3| (PREDICTED: RNA-binding protein Musashi homolog Rbp6-like isoform X1 [Apis mellifera])

HSP 1 Score: 80.1073 bits (196), Expect = 8.042e-18
Identity = 35/50 (70.00%), Postives = 39/50 (78.00%), Query Frame = 0

Query:    3 DLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            D  KMFIGGLSWQT+PE L+EYF  +GDI EVMVMKDPTTRRS     I+
Sbjct:   20 DPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFIT 69

[Close]

BLAST of EMLSAG00000005342 vs. nr
Match: gi|1032015705|ref|XP_016766348.1| (PREDICTED: RNA-binding protein Musashi homolog Rbp6-like isoform X2 [Apis mellifera])

HSP 1 Score: 79.7221 bits (195), Expect = 8.417e-18
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+PE L+EYF  +GDI EVMVMKDPTTRRS     I+
Sbjct:    3 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFIT 49

[Close]

BLAST of EMLSAG00000005342 vs. nr
Match: gi|759078046|ref|XP_011348808.1| (PREDICTED: RNA-binding protein Musashi homolog Rbp6 isoform X2 [Cerapachys biroi])

HSP 1 Score: 78.1814 bits (191), Expect = 1.087e-17
Identity = 34/43 (79.07%), Postives = 37/43 (86.05%), Query Frame = 0

Query:    3 DLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRS 45
            D  KMFIGGLSWQT+PE L+EYF  +GDI EVMVMKDPTTRRS
Sbjct:   20 DPGKMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRS 62

[Close]

BLAST of EMLSAG00000005342 vs. nr
Match: gi|808148610|ref|XP_012175290.1| (PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus terrestris])

HSP 1 Score: 80.1073 bits (196), Expect = 1.408e-17
Identity = 34/50 (68.00%), Postives = 39/50 (78.00%), Query Frame = 0

Query:    3 DLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            D  KMFIGGLSWQT+PE L+EYF  +GDI EVM+MKDPTTRRS     I+
Sbjct:   20 DPGKMFIGGLSWQTSPESLREYFTKYGDITEVMIMKDPTTRRSRGFGFIT 69

[Close]

BLAST of EMLSAG00000005342 vs. nr
Match: gi|939637162|ref|XP_014294488.1| (PREDICTED: RNA-binding protein Musashi homolog Rbp6 isoform X6 [Halyomorpha halys])

HSP 1 Score: 83.5741 bits (205), Expect = 1.672e-17
Identity = 34/47 (72.34%), Postives = 39/47 (82.98%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQT+PE L+EYFC +G+I EVMVMKDPTTRRS     I+
Sbjct:   22 KMFIGGLSWQTSPESLREYFCKYGEITEVMVMKDPTTRRSRGFGFIT 68

[Close]

BLAST of EMLSAG00000005342 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold808_size94304-snap-gene-0.22 (protein:Tk09782 transcript:maker-scaffold808_size94304-snap-gene-0.22-mRNA-1 annotation:"rna-binding protein musashi homolog rbp6 isoform x1")

HSP 1 Score: 85.5001 bits (210), Expect = 2.069e-22
Identity = 37/49 (75.51%), Postives = 42/49 (85.71%), Query Frame = 0

Query:    4 LVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            +VKMFIGGLSWQTTPEGLKEYF  FGDI+EVMVMKDP+TRRS     ++
Sbjct:   10 MVKMFIGGLSWQTTPEGLKEYFGKFGDISEVMVMKDPSTRRSRGFGFVT 58

[Close]

BLAST of EMLSAG00000005342 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold422_size175911-snap-gene-0.39 (protein:Tk09763 transcript:maker-scaffold422_size175911-snap-gene-0.39-mRNA-1 annotation:"rna-binding protein musashi homolog rbp6 isoform x6")

HSP 1 Score: 80.4925 bits (197), Expect = 6.128e-20
Identity = 34/47 (72.34%), Postives = 38/47 (80.85%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            KMFIGGLSWQTTPE ++EYF  FGD+AEVMVMKDP TRRS     I+
Sbjct:  151 KMFIGGLSWQTTPESIREYFSFFGDLAEVMVMKDPATRRSRGFGFIT 197

[Close]

BLAST of EMLSAG00000005342 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold142_size315517-snap-gene-2.23 (protein:Tk07706 transcript:maker-scaffold142_size315517-snap-gene-2.23-mRNA-1 annotation:"hypothetical protein D910_12176")

HSP 1 Score: 72.7886 bits (177), Expect = 3.497e-17
Identity = 29/47 (61.70%), Postives = 36/47 (76.60%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLSWQTTPE LKEYF  FG + +V+VMKDP T+RS     I+
Sbjct:   62 KLFVGGLSWQTTPEKLKEYFSQFGQVTDVLVMKDPVTQRSRGFGFIT 108

[Close]

BLAST of EMLSAG00000005342 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold142_size315517-snap-gene-2.24 (protein:Tk07716 transcript:maker-scaffold142_size315517-snap-gene-2.24-mRNA-1 annotation:"heterogeneous nuclear ribonucleoprotein a2 b1 homolog")

HSP 1 Score: 57.3806 bits (137), Expect = 8.301e-12
Identity = 22/47 (46.81%), Postives = 36/47 (76.60%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGL++ TT EGL+E+F NFG++ +V+VM+ P T+RS     ++
Sbjct:   28 KLFLGGLNYGTTEEGLREHFSNFGELTDVVVMRFPDTKRSRGFGFVT 74

HSP 2 Score: 50.8322 bits (120), Expect = 1.945e-9
Identity = 23/49 (46.94%), Postives = 32/49 (65.31%), Query Frame = 0

Query:    4 LVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            L K+FIGGL + TT EGL+ YF  FG+I + +VMK   T+RS     ++
Sbjct:  151 LRKLFIGGLDYSTTDEGLQTYFEQFGEIVDSVVMKFRDTKRSRGFGFVT 199

[Close]

BLAST of EMLSAG00000005342 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold1042_size67897-snap-gene-0.8 (protein:Tk11461 transcript:maker-scaffold1042_size67897-snap-gene-0.8-mRNA-1 annotation:"heterogeneous nuclear ribonucleoprotein a2 b1 homolog isoform x2")

HSP 1 Score: 56.6102 bits (135), Expect = 1.720e-11
Identity = 24/47 (51.06%), Postives = 35/47 (74.47%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+FIGGL++ TT EGLKE+F  +G++ +V+VMK P T+RS     I+
Sbjct:   52 KIFIGGLNYNTTEEGLKEHFGKYGELTDVVVMKFPDTKRSRGFGFIT 98

[Close]

BLAST of EMLSAG00000005342 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold141_size315519-snap-gene-0.13 (protein:Tk03982 transcript:maker-scaffold141_size315519-snap-gene-0.13-mRNA-1 annotation:"heterogeneous nuclear ribonucleoprotein 27c-like isoform x3")

HSP 1 Score: 47.3654 bits (111), Expect = 3.486e-8
Identity = 19/47 (40.43%), Postives = 29/47 (61.70%), Query Frame = 0

Query:    6 KMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLIS 52
            K+F+GGLSW T  E L  YF  FG++ + +VMK+  + RS     ++
Sbjct:   69 KLFVGGLSWDTAQESLLAYFGQFGEVIDCVVMKNLESGRSRGFGFVT 115

[Close]

BLAST of EMLSAG00000005342 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold939_size78603-processed-gene-0.3 (protein:Tk11930 transcript:snap_masked-scaffold939_size78603-processed-gene-0.3-mRNA-1 annotation:"rna-binding protein squid")

HSP 1 Score: 45.0542 bits (105), Expect = 1.886e-7
Identity = 22/50 (44.00%), Postives = 28/50 (56.00%), Query Frame = 0

Query:    2 KDLVKMFIGGLSWQTTPEGLKEYFCNFGDIAEVMVMKDPTTRRSSNLSLI 51
            +D  K+F GGL  +TT E LKEYF  FG +  V +  D  T RS   + I
Sbjct:   11 EDDRKLFAGGLPQETTEEELKEYFGQFGTVTSVNIKMDAMTGRSRGFAFI 60

The following BLAST results are available for this feature:

BLAST of EMLSAG00000005342 vs. GO
BLAST of EMLSAG00000005342 vs. C. finmarchicus
BLAST of EMLSAG00000005342 vs. L. salmonis peptides
BLAST of EMLSAG00000005342 vs. SwissProt
BLAST of EMLSAG00000005342 vs. Select Arthropod Genomes
BLAST of EMLSAG00000005342 vs. nr
BLAST of EMLSAG00000005342 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000005342 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25


Match Name	E-value	Identity	Description
-	1.635e-18	64.00	symbol:zgc:110796 "zgc:110796" species:7955 "Danio...	[more]
-	5.276e-17	62.00	symbol:msi1 "musashi homolog 1 (Drosophila)" speci...	[more]
-	7.988e-17	63.83	symbol:msi2a "musashi homolog 2a (Drosophila)" spe...	[more]
-	1.177e-16	65.96	symbol:Rbp6 "RNA-binding protein 6" species:7227 "...	[more]
-	4.593e-16	58.00	symbol:MSI2 "RNA-binding protein Musashi homolog 2...	[more]
-	1.773e-15	59.57	symbol:MSI2 "RNA-binding protein Musashi homolog 2...	[more]
-	2.125e-15	59.57	symbol:MSI2 "RNA-binding protein Musashi homolog 2...	[more]
-	2.617e-15	59.57	symbol:Msi2 "musashi RNA-binding protein 2" specie...	[more]
-	4.302e-15	59.57	symbol:msi2b "musashi homolog 2b (Drosophila)" spe...	[more]
-	6.538e-15	58.00	symbol:Msi1 "RNA-binding protein Musashi homolog 1...	[more]

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BLAST of EMLSAG00000005342 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592833098\|gb\|GAXK01124446.1\|	8.642e-20	78.72	TSA: Calanus finmarchicus comp24322_c2_seq1 transc...	[more]
gi\|592833088\|gb\|GAXK01124456.1\|	9.247e-20	78.72	TSA: Calanus finmarchicus comp24322_c2_seq11 trans...	[more]
gi\|592833093\|gb\|GAXK01124451.1\|	9.365e-20	78.72	TSA: Calanus finmarchicus comp24322_c2_seq6 transc...	[more]
gi\|592833086\|gb\|GAXK01124458.1\|	1.004e-19	78.72	TSA: Calanus finmarchicus comp24322_c2_seq13 trans...	[more]
gi\|592833097\|gb\|GAXK01124447.1\|	1.016e-19	78.72	TSA: Calanus finmarchicus comp24322_c2_seq2 transc...	[more]
gi\|592833090\|gb\|GAXK01124454.1\|	1.017e-19	78.72	TSA: Calanus finmarchicus comp24322_c2_seq9 transc...	[more]
gi\|592833089\|gb\|GAXK01124455.1\|	1.049e-19	78.72	TSA: Calanus finmarchicus comp24322_c2_seq10 trans...	[more]
gi\|592833094\|gb\|GAXK01124450.1\|	1.062e-19	78.72	TSA: Calanus finmarchicus comp24322_c2_seq5 transc...	[more]
gi\|592833087\|gb\|GAXK01124457.1\|	1.107e-19	78.72	TSA: Calanus finmarchicus comp24322_c2_seq12 trans...	[more]
gi\|592833092\|gb\|GAXK01124452.1\|	1.121e-19	78.72	TSA: Calanus finmarchicus comp24322_c2_seq7 transc...	[more]

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BLAST of EMLSAG00000005342 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 6


Match Name	E-value	Identity	Description
EMLSAP00000005342	8.996e-50	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s287:33613...	[more]
EMLSAP00000006940	3.655e-20	72.34	pep:novel supercontig:LSalAtl2s:LSalAtl2s393:59305...	[more]
EMLSAP00000000160	3.022e-9	42.55	pep:novel supercontig:LSalAtl2s:LSalAtl2s1025:1017...	[more]
EMLSAP00000006441	1.252e-8	42.55	pep:novel supercontig:LSalAtl2s:LSalAtl2s351:65854...	[more]
EMLSAP00000007863	6.324e-8	60.71	pep:novel supercontig:LSalAtl2s:LSalAtl2s460:94042...	[more]
EMLSAP00000008938	4.846e-7	40.82	pep:novel supercontig:LSalAtl2s:LSalAtl2s556:24165...	[more]

BLAST of EMLSAG00000005342 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|75027590\|sp\|Q9VVE5.3\|MSIR6_DROME	3.466e-17	65.96	RecName: Full=RNA-binding protein Musashi homolog ...	[more]
gi\|51316513\|sp\|Q96DH6.1\|MSI2H_HUMAN	7.439e-16	59.57	RecName: Full=RNA-binding protein Musashi homolog ...	[more]
gi\|51316506\|sp\|Q920Q6.1\|MSI2H_MOUSE	8.214e-16	59.57	RecName: Full=RNA-binding protein Musashi homolog ...	[more]
gi\|51316134\|sp\|Q8K3P4.1\|MSI1H_RAT	1.847e-15	58.00	RecName: Full=RNA-binding protein Musashi homolog ...	[more]
gi\|51316193\|sp\|O43347.1\|MSI1H_HUMAN	1.847e-15	58.00	RecName: Full=RNA-binding protein Musashi homolog ...	[more]
gi\|51316207\|sp\|Q61474.1\|MSI1H_MOUSE	1.847e-15	58.00	RecName: Full=RNA-binding protein Musashi homolog ...	[more]
gi\|2500574\|sp\|Q99383.1\|HRP1_YEAST	8.776e-11	47.06	RecName: Full=Nuclear polyadenylated RNA-binding p...	[more]
gi\|76803817\|sp\|P48809.2\|RB27C_DROME	1.266e-10	48.94	RecName: Full=Heterogeneous nuclear ribonucleoprot...	[more]
gi\|78099792\|sp\|P48810.2\|RB87F_DROME	1.419e-10	51.02	RecName: Full=Heterogeneous nuclear ribonucleoprot...	[more]
gi\|133256\|sp\|P21522.1\|ROA1_SCHAM	2.776e-10	51.06	RecName: Full=Heterogeneous nuclear ribonucleoprot...	[more]

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BLAST of EMLSAG00000005342 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 25


Match Name	E-value	Identity	Description
gb\|KFM69908.1\|	9.975e-21	77.27	RNA-binding protein Musashi-like protein, partial ...	[more]
XP_003249817.3	1.644e-20	70.00	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]
XP_016766348.1	1.720e-20	72.34	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]
EFX73024.1	1.205e-19	70.21	hypothetical protein DAPPUDRAFT_32116, partial [Da...	[more]
ABW08559.1	1.027e-17	65.96	RNA-binding protein 6, isoform B [Drosophila melan...	[more]
AGB94672.1	1.146e-17	65.96	RNA-binding protein 6, isoform G [Drosophila melan...	[more]
AAF49366.3	1.680e-17	65.96	RNA-binding protein 6, isoform A [Drosophila melan...	[more]
AGB96341.1	2.411e-13	53.06	musashi, isoform H [Drosophila melanogaster]	[more]
AFH06621.1	2.418e-13	53.06	musashi, isoform D [Drosophila melanogaster]	[more]
AAF56478.2	2.418e-13	53.06	musashi, isoform A [Drosophila melanogaster]	[more]

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BLAST of EMLSAG00000005342 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1067077218\|ref\|XP_018022219.1\|	1.863e-19	74.00	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]
gi\|1009563976\|ref\|XP_015914874.1\|	1.500e-18	70.00	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]
gi\|328704118\|ref\|XP_003242409.1\|	3.633e-18	62.71	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]
gi\|675377006\|gb\|KFM69908.1\|	4.881e-18	77.27	RNA-binding protein Musashi-like protein, partial ...	[more]
gi\|1009531258\|ref\|XP_015930952.1\|	5.547e-18	77.27	PREDICTED: RNA-binding protein Musashi homolog 2-l...	[more]
gi\|1032015703\|ref\|XP_003249817.3\|	8.042e-18	70.00	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]
gi\|1032015705\|ref\|XP_016766348.1\|	8.417e-18	72.34	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]
gi\|759078046\|ref\|XP_011348808.1\|	1.087e-17	79.07	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]
gi\|808148610\|ref\|XP_012175290.1\|	1.408e-17	68.00	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]
gi\|939637162\|ref\|XP_014294488.1\|	1.672e-17	72.34	PREDICTED: RNA-binding protein Musashi homolog Rbp...	[more]

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BLAST of EMLSAG00000005342 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 7


Match Name	E-value	Identity	Description
maker-scaffold808_size94304-snap-gene-0.22	2.069e-22	75.51	protein:Tk09782 transcript:maker-scaffold808_size9...	[more]
maker-scaffold422_size175911-snap-gene-0.39	6.128e-20	72.34	protein:Tk09763 transcript:maker-scaffold422_size1...	[more]
maker-scaffold142_size315517-snap-gene-2.23	3.497e-17	61.70	protein:Tk07706 transcript:maker-scaffold142_size3...	[more]
maker-scaffold142_size315517-snap-gene-2.24	8.301e-12	46.81	protein:Tk07716 transcript:maker-scaffold142_size3...	[more]
maker-scaffold1042_size67897-snap-gene-0.8	1.720e-11	51.06	protein:Tk11461 transcript:maker-scaffold1042_size...	[more]
maker-scaffold141_size315519-snap-gene-0.13	3.486e-8	40.43	protein:Tk03982 transcript:maker-scaffold141_size3...	[more]
snap_masked-scaffold939_size78603-processed-gene-0.3	1.886e-7	44.00	protein:Tk11930 transcript:snap_masked-scaffold939...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s287	supercontig	LSalAtl2s287:336138..336664 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	snap-LSalAtl2s287-processed-gene-3.10
Biotype	protein_coding
Evidence	IEA
Note	RNA-binding protein Musashi homolog Rbp6

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000005342 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000005342	EMLSAT00000005342-701189	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s287:336138..336664-

gene from alignment at LSalAtl2s287:336138..336664-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000005342-688108 ID=EMLSAG00000005342-688108|Name=EMLSAG00000005342|organism=Lepeophtheirus salmonis|type=gene|length=527bp|location=Sequence derived from alignment at LSalAtl2s287:336138..336664- (Lepeophtheirus salmonis)
ATGAAGGATTTGGTGTAATACATATTGTAAATAAATATTGAATAAAGTAG
TTATTAATCATTTTTAACAAAAAATGAAGGCAATTAAATATTTGCTCATT
CTTTAACTTTCTTTTTTCGTTGTAGGAAAATGTTTATCGGGGGTCTCTCA
TGGCAAACGACTCCCGAAGGACTTAAAGAATATTTTTGCAATTTTGGGGA
TATTGCAGAAGTGATGGTCATGAAGGATCCGACTACACGACGTTCTAGGT
AAGAATTGTATTTTTCAAATATATAGTTAGTTTTTTTGTTTATATATATA
TATATATAACAGTCTTTATTTGATTTAATAATTACCGAAAGGTGACTATT
ACTCGTACTTATAAACGTATACAGACATTAGAGTTGTGTACATACCAATA
TATGTATGTATAATAAATATAATAAGTTACAATTTTATATAGCAATCTAT
CACTAATATCAAATCAGATTCGTGTTCAAGATAACAAATACAACACTTCC
TTCATACTAGAAATAAAAAAATTCTAA

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