BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23")

HSP 1 Score: 60.077 bits (144), Expect = 1.793e-9
Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0

Query:  130 CPICSN-SAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGM 198
            C +C + S+G H  YG  TC  C+GFFRRS  +  +  ++C    NC +D  +   C+FCR QKCL  GM
Sbjct:   47 CKVCGDKSSGVH--YGVITCEGCKGFFRRSQSSVVN--YQCPRQKNCIVDRVNRNRCQFCRLQKCLALGM 112          

HSP 2 Score: 56.6102 bits (135), Expect = 2.440e-8
Identity = 30/71 (42.25%), Postives = 37/71 (52.11%), Query Frame = 0

Query:  531 CQVCG-LHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMN 600
            C+VCG   +G H  YG   CE C+ FFRRS    S   Y C     C +D  +R  C  CR +KCL  GM+
Sbjct:   47 CKVCGDKSSGVH--YGVITCEGCKGFFRRS--QSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMS 113          

BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7")

HSP 1 Score: 59.3066 bits (142), Expect = 2.582e-9
Identity = 28/72 (38.89%), Postives = 41/72 (56.94%), Query Frame = 0

Query:  529 RLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMN 600
            +LC+VC   A    ++G   CE C++FF R+  NQS     CK +  C +D K+R +C  CR  KC+  GM+
Sbjct:   55 QLCRVCEEPAAGF-HFGAFTCEGCKSFFGRTCNNQSV-IQECKNNYRCVVDKKNRTACKACRLRKCIMVGMS 124          

HSP 2 Score: 55.0694 bits (131), Expect = 6.207e-8
Identity = 26/69 (37.68%), Postives = 38/69 (55.07%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGM 198
            C +C   A    ++GA TC  C+ FF R+  NQ   I +C  +  C +D K+  +CK CR +KC+  GM
Sbjct:   57 CRVCEEPAAGF-HFGAFTCEGCKSFFGRTCNNQSV-IQECKNNYRCVVDKKNRTACKACRLRKCIMVGM 123          

BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000005620 (supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1 gene:EMLSAG00000005620 transcript:EMLSAT00000005620 description:"maker-LSalAtl2s301-augustus-gene-5.4")

HSP 1 Score: 55.0694 bits (131), Expect = 1.143e-8
Identity = 36/114 (31.58%), Postives = 55/114 (48.25%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSV-QNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHAVMAGT 242
            C +C   A  + ++GA TC  C+ FF R+  ++  + I +C  + +C ID K+  SCK CR +KCL+ GM  A              RYG +         S   +MH VM+ +
Sbjct:   38 CRVCDEPAAGY-HFGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCKACRLRKCLRVGMSKAG------------SRYGRR---------SNWFKMHCVMSNS 129          

HSP 2 Score: 53.9138 bits (128), Expect = 2.820e-8
Identity = 29/83 (34.94%), Postives = 46/83 (55.42%), Query Frame = 0

Query:  518 SPKTEDESVSLRLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYM-CKASGACDIDSKSRRSCACCRYEKCLEAGM 599
            S   E++ +  ++C+VC   A  + ++G   CE C++FF R+    +  +   CK + +C ID K+R SC  CR  KCL  GM
Sbjct:   25 SNSKEEDPMRNQICRVCDEPAAGY-HFGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCKACRLRKCLRVGM 106          

BLAST of retinoid x vs. L. salmonis genes
Match: EMLSAG00000003962 (supercontig:LSalAtl2s:LSalAtl2s212:220917:223668:-1 gene:EMLSAG00000003962 transcript:EMLSAT00000003962 description:"maker-LSalAtl2s212-augustus-gene-2.16")

HSP 1 Score: 52.373 bits (124), Expect = 2.269e-7
Identity = 55/219 (25.11%), Postives = 101/219 (46.12%), Query Frame = 0

Query:  690 VPLKFLETVENREK-ALFQGISMGLEEMTEIDVEDRQTLVQENGSAFFALIMSLYSI----PNNF-----------KKLMNDLTRTLEQMSRTNPNVRLTNVLDTLEVLKLSPGNHPTYETFYGNVSQSNKTLSEAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLV-FRSHGAKLHNKAKVERVQNNFAFMLYRYLKSRFAQ-KAGSKMAKALMLT 890
            +P + ++  E  E+ A+F    + +EE+  +   DR+ L+ ++   +F   M+ YS+    PN+F           +  +N  T  LE++S    N  L+ V                YE  Y +   S+  + E H+ L  +I H   +  N P    I+  +++ ++ F + G +  +   VE++   ++ MLYRYL+S   Q KA  K A+ L+L+
Sbjct:   68 IPFRTVQAWEYLERSAVFPLCILQIEEVGYLSSSDRRILLHQSYPKYFG--MAWYSLGKKDPNSFIINLRNRKDVSEAQLNTFTSILEELSIFTENESLSVV---------------QYEAIYASPWASSWEIEENHKKLQNRILHLSRNDPNYPRXXPILYTLLILMLLFFTXGVEFEDPNMVEKLHLKYSQMLYRYLRSNMTQEKAQLKYAQCLLLS 269          

BLAST of retinoid x vs. SwissProt
Match: gi|6016234|sp|P79926.1|HNF4B_XENLA (RecName: Full=Hepatocyte nuclear factor 4-beta; Short=HNF-4-beta; AltName: Full=Nuclear receptor subfamily 2 group A member 3)

HSP 1 Score: 82.8037 bits (203), Expect = 2.374e-15
Identity = 54/157 (34.39%), Postives = 80/157 (50.96%), Query Frame = 0

Query:   85 PDLSEFMDEQTIMDLLSQEFFNSKPNPHDTIIVSAEFRPTQTLPK-----CPICSNSA-GKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQM 235
            PD +E +D    M     EF + +  P +T I++ E      L       C IC + A GKH  YGA +C  C+GFFRRSV+  H  ++ C  S  C +D      C++CR +KC +AGMK   VQ++   ++RI  R  S +      NGS+ + +
Sbjct:    4 PDYTETLDSSYTM----LEFDSIRVLPSNTEIITVETASPGLLNNGINSFCAICGDRATGKH--YGASSCDGCKGFFRRSVRKNH--VYACRFSRQCIVDKDKRNQCRYCRLRKCFRAGMKKEAVQNE---RDRISMRRSSYED-----NGSLSINV 144          

HSP 2 Score: 66.2402 bits (160), Expect = 4.933e-10
Identity = 35/100 (35.00%), Postives = 51/100 (51.00%), Query Frame = 0

Query:  512 LSESTLSPKTEDESVSLRLCQVCGLHA-GKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEER 610
            ++  T SP   +  ++   C +CG  A GKH  YG   C+ C+ FFRRSV+      Y C+ S  C +D   R  C  CR  KC  AGM  + + ++ +R
Sbjct:   32 ITVETASPGLLNNGIN-SFCAICGDRATGKH--YGASSCDGCKGFFRRSVRKNH--VYACRFSRQCIVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDR 126          

BLAST of retinoid x vs. SwissProt
Match: gi|205371750|sp|P49880.2|ECR_AEDAE (RecName: Full=Ecdysone receptor; AltName: Full=20-hydroxy-ecdysone receptor; Short=20E receptor; AltName: Full=EcRH; Short=AaEcR; AltName: Full=Ecdysteroid receptor; AltName: Full=Nuclear receptor subfamily 1 group H member 1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.885e-15
Identity = 57/181 (31.49%), Postives = 86/181 (47.51%), Query Frame = 0

Query:  468 YTTTMINFDTSPLEALITDQF-IHDILSEDVIDPCSGEDVQAWSTLSESTLSPKTEDESVSLRLCQVCG-LHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAK-----------DVKRDKVLPI 635
            YTTTM N  +SP+     D +  +  +  + + P S   +  ++  S++    K         LC VCG   +G H  Y    CE C+ FFRRSV   +   Y CK   AC++D   RR C  CR +KCL  GM P+ ++ + +  +KR+ K+A+  K K              R ++LPI
Sbjct:  229 YTTTMSNGYSSPMSTGSYDPYSPNGKMGREDLSPSS--SLNGYTDGSDAKKQKKGPTPRQQEELCLVCGDRESGYH--YNALTCEGCKGFFRRSVTKNA--VYCCKFGHACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAIKRKEKKAQKEKDKVQTNATVSTTNSTYRSEILPI 403          

HSP 2 Score: 60.8474 bits (146), Expect = 4.079e-8
Identity = 37/103 (35.92%), Postives = 52/103 (50.49%), Query Frame = 0

Query:  123 PTQTLPKCPICSN-SAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQ----RKERILQRYGSK 220
            P Q    C +C +  +G H  Y A TC  C+GFFRRSV    + ++ C     C +D    + C+ CR +KCL  GM+P  V  + Q    RKE+  Q+   K
Sbjct:  284 PRQQEELCLVCGDRESGYH--YNALTCEGCKGFFRRSVTK--NAVYCCKFGHACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAIKRKEKKAQKEKDK 382          

BLAST of retinoid x vs. SwissProt
Match: gi|160221327|sp|P79387.3|STF1_PIG (RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1; AltName: Full=Adrenal 4-binding protein; AltName: Full=Fushi tarazu factor homolog 1; AltName: Full=Nuclear receptor subfamily 5 group A member 1; AltName: Full=Steroid hormone receptor Ad4BP)

HSP 1 Score: 81.6481 bits (200), Expect = 6.164e-15
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHA 237
            CP+C +    + +YG  TC SC+GFF+R+VQN  H  + CT S +C ID    K C FCR+QKCL  GM+   V++   R  R   ++G    +   +    K Q+ A
Sbjct:   13 CPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGR--NKFGPMYKRDRALKQQKKAQIRA 115          

HSP 2 Score: 72.4034 bits (176), Expect = 5.273e-12
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKRE----HKRAKVLKAK 625
            LC VCG     + +YG   CESC+ FF+R+VQN  +  Y C  S +C ID   R+ C  CR++KCL  GM  + + +D  R  + +    +KR + LK +
Sbjct:   12 LCPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQ 108          

BLAST of retinoid x vs. SwissProt
Match: gi|416584|sp|Q04752.1|STF1_BOVIN (RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1; AltName: Full=Adrenal 4-binding protein; AltName: Full=Fushi tarazu factor homolog 1; AltName: Full=Nuclear receptor subfamily 5 group A member 1; AltName: Full=Steroid hormone receptor Ad4BP)

HSP 1 Score: 81.6481 bits (200), Expect = 7.229e-15
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHA 237
            CP+C +    + +YG  TC SC+GFF+R+VQN  H  + CT S +C ID    K C FCR+QKCL  GM+   V++   R  R   ++G    +   +    K Q+ A
Sbjct:   13 CPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGR--NKFGPMYKRDRALKQQKKAQIRA 115          

HSP 2 Score: 72.4034 bits (176), Expect = 6.509e-12
Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKRE----HKRAKVLK 623
            LC VCG     + +YG   CESC+ FF+R+VQN  +  Y C  S +C ID   R+ C  CR++KCL  GM  + + +D  R  + +    +KR + LK
Sbjct:   12 LCPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALK 106          

BLAST of retinoid x vs. SwissProt
Match: gi|1703164|sp|P50569.1|STF1_RAT (RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1; AltName: Full=Adrenal 4-binding protein; AltName: Full=Fushi tarazu factor homolog 1; AltName: Full=Nuclear receptor subfamily 5 group A member 1; AltName: Full=Steroid hormone receptor Ad4BP)

HSP 1 Score: 81.6481 bits (200), Expect = 7.267e-15
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHA 237
            CP+C +    + +YG  TC SC+GFF+R+VQN  H  + CT S +C ID    K C FCR+QKCL  GM+   V++   R  R   ++G    +   +    K Q+ A
Sbjct:   13 CPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGR--NKFGPMYKRDRALKQQKKAQIRA 115          

HSP 2 Score: 72.7886 bits (177), Expect = 4.325e-12
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKRE----HKRAKVLKAK 625
            LC VCG     + +YG   CESC+ FF+R+VQN  +  Y C  S +C ID   R+ C  CR++KCL  GM  + + +D  R  + +    +KR + LK +
Sbjct:   12 LCPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQ 108          

BLAST of retinoid x vs. SwissProt
Match: gi|341942103|sp|P33242.3|STF1_MOUSE (RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1; AltName: Full=Adrenal 4-binding protein; AltName: Full=Embryonal LTR-binding protein; Short=ELP; AltName: Full=Embryonal long terminal repeat-binding protein; AltName: Full=Fushi tarazu factor homolog 1; AltName: Full=Nuclear receptor subfamily 5 group A member 1; AltName: Full=Steroid hormone receptor Ad4BP; AltName: Full=Steroid hydroxylase positive regulator)

HSP 1 Score: 81.6481 bits (200), Expect = 7.331e-15
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHA 237
            CP+C +    + +YG  TC SC+GFF+R+VQN  H  + CT S +C ID    K C FCR+QKCL  GM+   V++   R  R   ++G    +   +    K Q+ A
Sbjct:   13 CPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGR--NKFGPMYKRDRALKQQKKAQIRA 115          

HSP 2 Score: 72.7886 bits (177), Expect = 4.441e-12
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKRE----HKRAKVLKAK 625
            LC VCG     + +YG   CESC+ FF+R+VQN  +  Y C  S +C ID   R+ C  CR++KCL  GM  + + +D  R  + +    +KR + LK +
Sbjct:   12 LCPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALKQQ 108          

BLAST of retinoid x vs. SwissProt
Match: gi|49036491|sp|Q95L87.1|STF1_MACEU (RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1; AltName: Full=Nuclear receptor subfamily 5 group A member 1)

HSP 1 Score: 81.6481 bits (200), Expect = 7.434e-15
Identity = 37/83 (44.58%), Postives = 50/83 (60.24%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKER 212
            CP+C +    + +YG  TC SC+GFF+R+VQN  H  + CT S NC ID    K C +CR+QKCL  GM+   V++   R  R
Sbjct:   13 CPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQNCKIDKTQRKRCPYCRFQKCLTVGMRLEAVRADRMRGGR 92          

HSP 2 Score: 71.633 bits (174), Expect = 1.211e-11
Identity = 42/117 (35.90%), Postives = 61/117 (52.14%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKRE----HKRAKVLKAKDVKRDKVLPISRGLDFE 642
            LC VCG     + +YG   CESC+ FF+R+VQN  +  Y C  S  C ID   R+ C  CR++KCL  GM  + + +D  R  + +    +KR + LK    ++ K L  + G   E
Sbjct:   12 LCPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQNCKIDKTQRKRCPYCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALK----QQKKALIRANGFKLE 121          

BLAST of retinoid x vs. SwissProt
Match: gi|3121738|sp|Q13285.2|STF1_HUMAN (RecName: Full=Steroidogenic factor 1; Short=SF-1; Short=STF-1; Short=hSF-1; AltName: Full=Adrenal 4-binding protein; AltName: Full=Fushi tarazu factor homolog 1; AltName: Full=Nuclear receptor subfamily 5 group A member 1; AltName: Full=Steroid hormone receptor Ad4BP)

HSP 1 Score: 81.6481 bits (200), Expect = 7.829e-15
Identity = 41/108 (37.96%), Postives = 59/108 (54.63%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHA 237
            CP+C +    + +YG  TC SC+GFF+R+VQN  H  + CT S +C ID    K C FCR+QKCL  GM+   V++   R  R   ++G    +   +    K Q+ A
Sbjct:   13 CPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGR--NKFGPMYKRDRALKQQKKAQIRA 115          

HSP 2 Score: 72.7886 bits (177), Expect = 4.958e-12
Identity = 38/98 (38.78%), Postives = 55/98 (56.12%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKRE----HKRAKVLK 623
            LC VCG     + +YG   CESC+ FF+R+VQN  +  Y C  S +C ID   R+ C  CR++KCL  GM  + + +D  R  + +    +KR + LK
Sbjct:   12 LCPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNNKH--YTCTESQSCKIDKTQRKRCPFCRFQKCLTVGMRLEAVRADRMRGGRNKFGPMYKRDRALK 106          

BLAST of retinoid x vs. SwissProt
Match: gi|44889025|sp|P49867.2|FTZF1_BOMMO (RecName: Full=Nuclear hormone receptor FTZ-F1; AltName: Full=BmFTZ-F1; AltName: Full=Nuclear receptor subfamily 5 group A member 3)

HSP 1 Score: 82.0333 bits (201), Expect = 8.041e-15
Identity = 42/114 (36.84%), Postives = 64/114 (56.14%), Query Frame = 0

Query:  498 IDPCSGEDVQAWSTL-SESTLSPKTEDESVSLRLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEER 610
            +DP +G   +  + L +  T+  +T+ + V   LC VCG     + +YG   CESC+ FF+R+VQN+    Y C A  AC ID   R+ C  CR++KCL+ GM  + + +D  R
Sbjct:   55 VDPTTGTGGEPGAYLPTAGTVCDQTDTKDVIEELCPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNKK--VYTCVAERACHIDKTQRKRCPFCRFQKCLDVGMKLEAVRADRMR 165          

HSP 2 Score: 78.9518 bits (193), Expect = 6.584e-14
Identity = 35/83 (42.17%), Postives = 48/83 (57.83%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKER 212
            CP+C +    + +YG  TC SC+GFF+R+VQN+   ++ C     C ID    K C FCR+QKCL  GMK   V++   R  R
Sbjct:   89 CPVCGDKVSGY-HYGLLTCESCKGFFKRTVQNKK--VYTCVAERACHIDKTQRKRCPFCRFQKCLDVGMKLEAVRADRMRGGR 168          

BLAST of retinoid x vs. SwissProt
Match: gi|12230057|sp|Q9YH33.1|ESR1_ORENI (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.036e-14
Identity = 43/108 (39.81%), Postives = 59/108 (54.63%), Query Frame = 0

Query:  529 RLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRA--KVLKAKDVKRDKVLP 634
            R C VC  +A  + +YG   CE C+AFF+RS+Q  +   YMC A+  C ID   R+SC  CR  KC E GM    +  D  R ++RE +RA  +   AKD+   +  P
Sbjct:  137 RFCAVCSDYASGY-HYGVWSCEGCKAFFKRSIQGHN--DYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGMRKDRGRVLRREKRRACDRDKPAKDLPHTRASP 241          

HSP 2 Score: 65.855 bits (159), Expect = 9.850e-10
Identity = 32/97 (32.99%), Postives = 51/97 (52.58%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQ 226
            C +CS+ A  + +YG  +C  C+ FF+RS+Q   H  + C  +  CTID    KSC+ CR +KC + GM    ++    R  R  +R    + +P +
Sbjct:  139 CAVCSDYASGY-HYGVWSCEGCKAFFKRSIQG--HNDYMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGMRKDRGRVLRREKRRACDRDKPAK 232          

BLAST of retinoid x vs. nr
Match: gi|728054567|gb|AIY67763.1| (HR97a-like receptor 4 [Tigriopus japonicus])

HSP 1 Score: 381.333 bits (978), Expect = 4.864e-120
Identity = 206/434 (47.47%), Postives = 291/434 (67.05%), Query Frame = 0

Query:  474 NFDTSPLEALITDQFIHDILSEDVIDPC----SGEDVQAWSTLSESTLSPKTEDESVSL------RLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKRDKVLPISRGLDFEFTTEEELKVMQIRNYAKTCKLNHMALTMAKDGGPLTVLWDVIFNKQNVPLKFLETVENREKALFQGISMGLEEMTEIDVEDRQTLVQENGSAFFALIMSLYSIPNNFKKLMNDLTRTLE-QMSRTNPNVRLTNVLDTLEVLKLSPGNHPTYETFYGNVSQSNKTLSEAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLVFRSHGAK-LHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSKMAKALMLTTYTTE 895
            +FD S LE+ ITDQFI DIL+++ ++P       E        S  +L  K +  S S       RLC VC L AGKHNYYGGQVCESCRAFFRRS+QNQ++P Y CKA   C IDSKSR+SCA CR++KCL AGMNPKWII+D+ER+ K E K++K++KAK   + +++PI R ++ +FT EE+LKV ++  YA+  K++ +A  +A+D  PL  LW +  N +   + F+  +E +E  +F+ I++GLEEMT++D EDR+TLVQ N +AFFALIMS+Y  P +F + + D+T  L+  +   +PN  L N ++TLEV+K+S     ++ETFY N    ++ LS A R ++ KIQ A+    N P D +I+C+VILNL+F S G+  L +  KVER+QN+  FML+RYL+S++  KA  KM K +ML +YT E
Sbjct:    5 DFDQS-LESFITDQFICDILTQEPLEPFDLIDEEEPSSNSPISSNDSLPIKIKRSSSSSLQIQCPRLCHVCNLPAGKHNYYGGQVCESCRAFFRRSIQNQTHPIYHCKAKKCCIIDSKSRKSCAWCRFQKCLLAGMNPKWIITDQERKFKLEAKQSKIMKAK--MKQEIVPIQRPVELKFTVEEKLKVERLSKYARKFKVSVLANHLAQDIAPLKTLWKLALNLETPSVDFIHFLEEKETTIFRTIALGLEEMTDLDSEDRETLVQRNSTAFFALIMSIYFNPGDFARHLEDVTEALDIALQANDPNPDLKNAVETLEVIKMSNFPGLSFETFYSNCPNKDENLSNAQRNIMNKIQSALREMPNKPIDAIIICIVILNLIFLSDGSSPLKDGKKVERIQNDQIFMLHRYLRSKYGDKASGKMGKLVMLMSYTQE 435          

HSP 2 Score: 129.413 bits (324), Expect = 4.488e-28
Identity = 94/351 (26.78%), Postives = 161/351 (45.87%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHAVMAGT---FTVEEHQCLFGWYQKWHDFGASKSLDYFCDHVGVFQAILESSYEGKPMSNSAFRSMTKADEYVIVSYYFNEEEIQNLHFDDRMTLIARNFAVLYGLLWGSFSTLDDPDAQMQTY---FDFCLRNAANNPRYHSLLDLWQ-----NFVDNGKRVSPYHCGLIQRDSFPDSLKYRQYINDTEKIGSVMASD-NALDAILMIILNYICFYSTDFPDQLREGEKIKTKQNNYLALLHRY 468
            C +C+  AGKH YYG + C SCR FFRRS+QNQ HPI+ C     C IDSKS KSC +CR+QKCL AGM P ++ + ++RK      +  +  Q   +   MK ++  +       FTVEE   +    +    F  S   ++    +   + + + +   +  S      + + +  +  +     EE+ +L  +DR TL+ RN    + L+   +    D    ++      D  L+    NP   + ++  +     NF   G     ++     +D    + + R  +N  +     M +       I ++ILN I  + +D    L++G+K++  QN+ + +LHRY
Sbjct:   71 CHVCNLPAGKHNYYGGQVCESCRAFFRRSIQNQTHPIYHCKAKKCCIIDSKSRKSCAWCRFQKCLLAGMNPKWIITDQERK------FKLEAKQSKIMKAKMKQEIVPIQRPVELKFTVEEKLKVERLSKYARKFKVSVLANHLAQDIAPLKTLWKLALNLETPSVDFIHFLEEKETTIFRTIALGLEEMTDLDSEDRETLVQRNSTAFFALIMSIYFNPGDFARHLEDVTEALDIALQANDPNPDLKNAVETLEVIKMSNF--PGLSFETFYSNCPNKDENLSNAQ-RNIMNKIQSALREMPNKPIDAIIICIVILNLI--FLSDGSSPLKDGKKVERIQNDQIFMLHRY 410          

BLAST of retinoid x vs. nr
Match: gi|657600350|gb|AID52836.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 164.851 bits (416), Expect = 5.560e-40
Identity = 109/354 (30.79%), Postives = 183/354 (51.69%), Query Frame = 0

Query:  128 PKCPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFK-CTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHAVMAGTFTVEEHQCLFGWYQKWHDFGASKSLDYFCDHVGVFQAILESSYE---GKPMSNSAFRSMTKADEYVIVSYYFNEEEIQNLHFDDRMTLIARNFAVLYGLLWGSFSTLDDPDAQMQTYFDFCLRNAAN----NPRYHSLLDLWQNFVDNGKRVSPYHCGLIQRDSFPDSLKYRQYINDTEKIGSVM--ASDNALDAILMIILNYICFYSTDFPDQLREGEKIKTKQNNYLALLHRYTTT 471
            P CPIC++ AGKH YYG + C+SCRGFF+RSV+N+ H  F  C G+ NC I ++S K+CK+CR+QKCLQ+GMK  YV + ++           K      I   +K    A ++  FT  E       Y+    FG       F  +   F   L +  +   G  M + AF   T+ ++   ++Y+F+ +++ +L   DRMTLI+ NF  ++GLLW  +S   D    + T+++  L++        P    +L +++     GK+       +  R +       +++ N   ++ S +  +S ++ D I++++L++I  ++T+F   L++  KI+  Q  YL LLHRY  T
Sbjct:   89 PLCPICNDVAGKHFYYGVQACISCRGFFQRSVRNRFHLKFICCKGTQNCRITARSRKNCKWCRFQKCLQSGMKTCYVMTHDKSG------LPPKSKLILPIKAMVKT---ANLSQIFTEHEVDKALSIYKNLLSFGYRSYYQLFSQNEQEFMTFLRALNDQGGGPSMISEAF---TETNKQATINYFFSIDDMASLTPFDRMTLISHNFPSIFGLLWSVYSYTPD----LCTFYEEFLKHGYEFRDREPEIDKILMVFEANQLLGKKPKNLTIDVTFRSNSATQDLIQRHDNLVHEVNSGLRESSQSSADYIIVMLLSHIIMFATEFAVSLQDKAKIQATQEKYLVLLHRYLRT 426          

HSP 2 Score: 128.257 bits (321), Expect = 1.218e-27
Identity = 89/363 (24.52%), Postives = 168/363 (46.28%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYM-CKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKRDKVLPISRGLDFEFTTEEELKVMQIRNYAKTCKLNHMALTMAKDGGPLTVLWDVIFNKQNVPLKFLETVENREKALFQGISMGLEEMTEIDVEDRQTLVQENGSAFFALIMSLYSIPNNFKKLMNDLTRTLEQMSRTNPNV-RLTNVLDTLEVLKLSPGNHPTYETFYGNVSQSNKTLSEAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLVFRSHGA-KLHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSKMAKALML 889
            LC +C   AGKH YYG Q C SCR FF+RSV+N+ +  ++ CK +  C I ++SR++C  CR++KCL++GM   ++++ +        K     K+K +   K +  +  L   FT  E  K + I     +          +++          + ++   P    E      K         +++M  +   DR TL+  N  + F L+ S+YS   +      +  +   +     P + ++  V +  ++L   P N     TF  N   + + L + H  LV ++   +     +  D +IV L+   ++F +  A  L +KAK++  Q  +  +L+RYL++ +  +A +K+++ +M+
Sbjct:   90 LCPICNDVAGKHFYYGVQACISCRGFFQRSVRNRFHLKFICCKGTQNCRITARSRKNCKWCRFQKCLQSGMKTCYVMTHD--------KSGLPPKSKLILPIKAMVKTANLSQIFTEHEVDKALSIYKNLLSFGYRSYYQLFSQNEQEFMTFLRALNDQGGGPSMISEAFTETNKQATINYFFSIDDMASLTPFDRMTLISHNFPSIFGLLWSVYSYTPDLCTFYEEFLKHGYEFRDREPEIDKILMVFEANQLLGKKPKNLTIDVTFRSN--SATQDLIQRHDNLVHEVNSGLRESSQSSADYIIVMLLSHIIMFATEFAVSLQDKAKIQATQEKYLVLLHRYLRTHYQGRARAKLSETMMI 442          

BLAST of retinoid x vs. nr
Match: gi|657600348|gb|AID52835.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 151.754 bits (382), Expect = 2.425e-35
Identity = 114/389 (29.31%), Postives = 186/389 (47.81%), Query Frame = 0

Query:  518 SPKTEDESVSLRLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKRDKVLPISRGLDFEFTTEEELKVMQIRNYAKTCKLNHMALTMAKDGGPLTVLWDVIFNKQNVPLKFLETVENRE---KALFQGISMGLEEMTEIDVEDRQTLVQENGSAF--------FALIMSLYSIPNNFKKLMNDLTRTLEQMSRTNPNVRLTNVLDTLEVLKLSPGNHPTYETFYGNVSQSNKTLSEAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLVFRSHGAKLHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSKMAKALMLTTYTTE 895
            +P+T + S   R C VC   +GKH+YYG QVC SCRAFFRRS  N ++  + CK S  C I+SKS +SC  CRY+KCL AGM   W+++DEE RV+R   R ++ K   ++   V      +  ++TT+EE ++ Q RN         +A   + +        D +    N P   +     R      + + IS  L  M +I   DR  L+  N   +        F     +  I   F K +    RTL+  S   PN  + ++  T +  KLS  ++  +     N+  +++++      L+T IQ           D++++ L+ + L+F S   KL ++  V ++QN + +MLYRY+  +   KA  K+ + + + +   E
Sbjct:   95 TPRTPNLSKPHRECPVCDNPSGKHSYYGAQVCFSCRAFFRRSTINSTFTEFQCKDSKTCGINSKSWKSCKFCRYQKCLSAGMKSTWVLNDEE-RVQRNANRKRLRK---IREAGVAFSETFIGNQWTTDEEHQIRQARNDFLLKGFGVIAQFCSSNPNIFDRYVDCL--NGNTPFDPMLVGYTRRFIYSEVMKSIS-DLLIMKDIHPVDRFLLLSHNYPLWVSFEEAVQFRNHQEMEKIQQTFSKCI----RTLKSSSDLWPNANIDHLQRTFD--KLSVHDNANFLDKLNNLI-TDQSMRRRRTQLITSIQSWPKISSRGLADDILLTLMTMILIFSSDSLKLQSEGVVSKIQNQYCYMLYRYVNFKSPGKAHVKLGEGMEIVSKVRE 469          

HSP 2 Score: 129.413 bits (324), Expect = 7.375e-28
Identity = 125/435 (28.74%), Postives = 190/435 (43.68%), Query Frame = 0

Query:   97 MDLLS-QEFFNSKPNPHDTIIV------------SAEFRPTQTLP-------KCPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHAVMAGTFTV-EEHQCLFGWYQKWHDF---GASKSLDYFCDHVGVFQAILESSYEGKPMSNSAFRSMTKADEYVIVSYYFNEEEI-QNLHFDDRMTLIARNFAVLYGLLWGSFSTL-----DDPDAQMQTYFDFCLRNAANNPRYHSLLDLWQNF-VDNGKRVSPYHCGLIQRDSFPDSLKYRQYIND-----------TEKIGSV-----MASDNALDAILMIILNYICFYSTDFPDQLREGEKIKTKQNNYLALLHRYTTTMINFDTSPLEALI 484
            +D +S QE  N  P   DT  +            S++F  T   P       +CP+C N +GKH+YYGA+ C SCR FFRRS  N     F+C  S  C I+SKSWKSCKFCRYQKCL AGMK  +V + E+R +R   R   +K +   +  S        +   +T  EEHQ      Q  +DF   G      +   +  +F   ++      P  +      T+   Y  V    ++  I +++H  DR  L++ N+      LW SF             ++Q  F  C+R   ++       DLW N  +D+ +R          + S  D+  +   +N+           T+ I S+     ++S    D IL+ ++  I  +S+D      EG  +   QN Y  +L+RY    +NF  SP +A +
Sbjct:   55 LDTISLQELMNVAPVECDTQTITNDPNIVSQTEDSSDFSDTPRTPNLSKPHRECPVCDNPSGKHSYYGAQVCFSCRAFFRRSTINSTFTEFQCKDSKTCGINSKSWKSCKFCRYQKCLSAGMKSTWVLNDEERVQRNANRKRLRKIREAGVAFS-----ETFIGNQWTTDEEHQI----RQARNDFLLKGFGVIAQFCSSNPNIFDRYVDCLNGNTPF-DPMLVGYTRRFIYSEVMKSISDLLIMKDIHPVDRFLLLSHNYP-----LWVSFEEAVQFRNHQEMEKIQQTFSKCIRTLKSSS------DLWPNANIDHLQRT-------FDKLSVHDNANFLDKLNNLITDQSMRRRRTQLITSIQSWPKISSRGLADDILLTLMTMILIFSSDSLKLQSEG-VVSKIQNQYCYMLYRY----VNF-KSPGKAHV 455          

BLAST of retinoid x vs. nr
Match: gi|657600346|gb|AID52834.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 144.821 bits (364), Expect = 5.854e-33
Identity = 113/392 (28.83%), Postives = 193/392 (49.23%), Query Frame = 0

Query:  531 CQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKR-EHKRAKVLKAKDVKRDKVLPISRGLDFEFTTEEELKVMQIRN--YAKTCKLNHMALTMAK--DGGPLTVLWDVIFNKQNVPLKFLETVENR---EKALF----QGISMGLEEMTEIDVEDRQTLVQENGSAFFALIMSLYSIPNNFKKLMNDLTRTLEQMSRTNPNVRLT--------------NVLDTLEVL-KLSPGNHPTYETFYGNVSQSNKTLSEAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLVFRSHGAKLHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSKMAKALMLTTYTTE 895
            C VCG  +GKH YYG QVC SCRAFFRRS  N +   + CKA   C IDSKS +SC  CR++KCL AGM P W+++DEER  +  + KR +  +  +V  + VL        ++T +E+L++  IR   + KT      +  +AK     P+      I N      KF+    NR   +  L     + +S G+ +M      +   L   N    F L+   Y++ ++F++ +  L +  +++ +   NVR +              NV    E + K+S  ++        N+ Q  +T  +  R+L+T IQ       N   D+++  L+++ L+      +L++++ V + QN + ++LYRY+ S++  +A SK+ + + + +   E
Sbjct:  115 CPVCGNPSGKHLYYGAQVCSSCRAFFRRSTINSAAEEFRCKADKKCGIDSKSWKSCKFCRFQKCLSAGMRPNWVMNDEERTQRNAKRKRTRTKRVDNVVSEAVLS------HQWTVDEDLQIRGIREEIFEKT------SCIIAKFYADNPM------ILN------KFIACANNRTPFDSVLLAYTKRFVSNGMMKM----FNELLVLQHINPMDRFLLLSRNYAMWSSFEEAI--LFKNRQEVIKNQQNVRNSLNKIKTSADGDQAFNVDMIQEAMDKISLEDNVESSDVIDNLIQDQQT-RDRRRSLITSIQAWPKFNANGVSDDILTTLMMMILICCPDALQLNSESAVSQFQNQYCYILYRYINSKYPGQAHSKLGEGMEIVSKVRE 475          

HSP 2 Score: 137.887 bits (346), Expect = 1.125e-30
Identity = 108/360 (30.00%), Postives = 173/360 (48.06%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHAVMAGTFTVEEHQCLFGWYQKWHDFGASKSLDYFCDHVGVFQAILESSYEGKPMSNSAFRSMTKADEYVIVSYYFNEEEI-QNLHFDDRMTLIARNFAVLYGLLWGSF-STLDDPDAQMQTYFDFCLRNAANNPRYHS------LLDLWQNFVD-----NGKRVSPYHCGLIQRDSFPDSLKYRQYINDTE---KIGSVMASDNALDAILMIILNYICFYSTDFPD--QLREGEKIKTKQNNYLALLHRYTTT 471
            CP+C N +GKH YYGA+ C SCR FFRRS  N     F+C     C IDSKSWKSCKFCR+QKCL AGM+P +V + E+R +R  +R   K+++  +++  +     AV++  +TV+E   + G  ++  +  +     ++ D+  +    +  +    P  +S   + TK      +   FNE  + Q+++  DR  L++RN+A     +W SF   +   + Q        +RN+ N  +  +       +D+ Q  +D     +    S     LIQ     D  + R  I   +   K  +   SD+ L  ++M+IL  IC      PD  QL     +   QN Y  +L+RY  +
Sbjct:  115 CPVCGNPSGKHLYYGAQVCSSCRAFFRRSTINSAAEEFRCKADKKCGIDSKSWKSCKFCRFQKCLSAGMRPNWVMNDEERTQRNAKR---KRTRTKRVDNVVS---EAVLSHQWTVDEDLQIRGIREEIFEKTSCIIAKFYADNPMILNKFIACANNRTPF-DSVLLAYTKRFVSNGMMKMFNELLVLQHINPMDRFLLLSRNYA-----MWSSFEEAILFKNRQEVIKNQQNVRNSLNKIKTSADGDQAFNVDMIQEAMDKISLEDNVESSDVIDNLIQDQQTRD--RRRSLITSIQAWPKFNANGVSDDILTTLMMMIL--IC-----CPDALQLNSESAVSQFQNQYCYILYRYINS 453          

BLAST of retinoid x vs. nr
Match: gi|657600344|gb|AID52833.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 143.665 bits (361), Expect = 3.371e-32
Identity = 108/392 (27.55%), Postives = 183/392 (46.68%), Query Frame = 0

Query:  512 LSESTLSPKTEDESVSLRLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEE--RRVKREHKRAKVLKAKDVKRDKVLPISRGLDFEFTTEEELKVMQIRN-YAKTCKLNHMALTMAKDGGP--LTVLWDVIFNKQNVPLKFLETVENREKALFQGISMGLEEMTEIDVEDRQTLVQENGSAFFALIMSLYSIPNNFKKLMNDLTRTLEQMSRTNPNVRLTNVLDTLEVLKLSPGNHP--TYETFYGNVSQSNKTLSEAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLVFRSHGAKLHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSK-MAKALMLTTYTTE 895
            L +ST+ P   D +     C +C   AGKHNYYGG+ C SCRAFFRR+VQ++ Y  + C     C+I+ K+RRSC  CR++KCL +GM   W++ D E  RR  + HK AK   ++     KV+        E       ++  IR  + K   L   +L       P  +  L +  +      + F++  +         +    EE   +   DR+ L++ NG      +++ +      ++  + L   +EQ +++     L ++++ L  L ++    P   Y  FY +   S+K     +  L+ K++        +P DE+ + L  + + F      L  ++ VE +Q  +  ML+RYL  R+  KA +K +A  LM++TY  E
Sbjct:  177 LPKSTMPPSNWDNTK----CYICQEKAGKHNYYGGKACPSCRAFFRRAVQSKYYEIFFCNKGEKCEINLKTRRSCQFCRFKKCLASGMRVAWVLPDGERNRRFNKLHKSAKKNNSQIEGDLKVVAKKPKGPLEIQGVLPGEIDMIRGVHMKVDSLGAKSLREFILAQPEFMKKLANFSYFGGQPDMDFIQKFQLMCDRFAHFVLTTSEEFKMLSFGDRRQLIEVNGP-----LLNRFKCSVTIQETNSCLVNGIEQATKSGEFPYLNDIVEKLAQLNMT-DRKPILAYNQFYASPWASSKEAEGRYFNLMIKMKAWPRDNIASPVDEIQMTLAKMIIAFSPDFLNLEQRSVVEAIQMKYVSMLHRYLVFRYGAKAATKRLAAGLMMSTYARE 558          

HSP 2 Score: 120.168 bits (300), Expect = 1.539e-24
Identity = 83/250 (33.20%), Postives = 121/250 (48.40%), Query Frame = 0

Query:  106 NSKPNPHDTIIVSAEFRPTQTLP-------KCPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMK---------LQMHAVMAGTFTVEEHQCLFGWYQKWHDFGASKSLDYFCDHVGVFQAILE--SSYEGKPMSN--SAFRSMTKADEYVIVSYYFNEEEIQNLHFDDRMTLIARNFAVL 335
            N +P      + S E  P  T+P       KC IC   AGKH YYG + C SCR FFRR+VQ++++ IF C     C I+ K+ +SC+FCR++KCL +GM+ A+V    +R  R  + + S K   +QI G +K         L++  V+ G     E   + G + K    GA KSL  F      F   L   S + G+P  +    F+ M     + +++     EE + L F DR  LI  N  +L
Sbjct:  161 NPEPQKSPGALDSEENLPKSTMPPSNWDNTKCYICQEKAGKHNYYGGKACPSCRAFFRRAVQSKYYEIFFCNKGEKCEINLKTRRSCQFCRFKKCLASGMRVAWVLPDGERNRRFNKLHKSAKKNNSQIEGDLKVVAKKPKGPLEIQGVLPG-----EIDMIRGVHMKVDSLGA-KSLREFILAQPEFMKKLANFSYFGGQPDMDFIQKFQLMCDRFAHFVLT---TSEEFKMLSFGDRRQLIEVNGPLL 401          

BLAST of retinoid x vs. nr
Match: gi|728054565|gb|AIY67762.1| (HR97a-like receptor 6 [Tigriopus japonicus])

HSP 1 Score: 138.658 bits (348), Expect = 7.807e-31
Identity = 116/403 (28.78%), Postives = 188/403 (46.65%), Query Frame = 0

Query:  510 STLSESTLSPKTEDESVSLRL-CQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKRDKVLP---ISRGLDFEFTTEEELKVMQIRNYAKTCKLNHMALTMAKDGGPLTVLWDVI---FNKQNVPL----KFLETVENREKALFQGISMGLEEMTEIDVEDRQTLVQENGSAFFALIMSLYSI----PNNFKKLMNDLTRTLEQMSRTNPNVRLTNVLDTLEVLKLSPGNHPTYETFYGNVSQSNKTLS------EAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLVFRSHGAKLHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSKMAKALMLTT 891
            S +S   +S   E E++  +L C VCG  AGKH YYGGQVC SCRAFFRR+V  +SY  + C     C I+SKS +SC  CR++KCL++GM   W+ ++++     +  +AK       K   ++P   I R +  ++T EEE  V    N+A     + +    A+       +  V    F+ +N P     +F   + N E + F+       +M ++   D++ LV EN    F L   +  +       + +L  D  +      R + +    NV+  L    LS  +HP  +    N + S   LS          +L+T+IQ     F + P D ++  L+   ++F  +   L +  KV  +Q  F  ML RYLK++  ++A  K+ +A+   T
Sbjct:   84 SDVSFKQVSSSVEPEAIKTQLICLVCGNAAGKHCYYGGQVCVSCRAFFRRAVLGKSYSEFKCSKEEQCVINSKSWKSCRFCRFQKCLQSGMRIAWVTTEDKPSGPSKGSKAK------PKGKLIVPTSAIQRSIQLKWTLEEECYVRGFYNHAWENWCHVITDFYARHPVYFASIISVFLLDFSVENNPFMTKSEFYGQMVNMELS-FKRFWFTHPDMNDLCQADQEQLVNENNDLIFTLCRCVQYLNAQDVAKYSRLYRDRLK-----ERASQDESCQNVVAMLSNFTLS--DHPE-DNITPNTTTSLCLLSADDESKSLESSLMTEIQEWNRLFPHGPCDPIMQTLMGYLIIFDPNMKNLQDYKKVCDIQTKFLHMLQRYLKAKVPKQATKKIGQAVEFIT 471          

HSP 2 Score: 127.487 bits (319), Expect = 3.200e-27
Identity = 107/406 (26.35%), Postives = 182/406 (44.83%), Query Frame = 0

Query:   86 DLSEFMDEQTIMDLLSQEFFNSKPNPHDT----IIVSAEFRPTQTLPKCPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSKKSQPNQINGSMKLQMHAVMAGT---FTVEEHQCLFGWY----QKW----HDFGASKSLDYFCDHVGVFQAILESSYEGKP-MSNSAFRSMTKADEYVIVSYYFNEEEIQNLHFDDRMTLIARNFAVLYGLL-WGSFSTLDDPDAQMQTYFDFCLRNAANNPRYHSLLDLWQNFV------DNGKRVSPYHCGLIQRDSFPDSLKYRQYINDTEKIGSVMASDNALDAILMIILNYICFYSTDFPDQLREGEKIKTKQNNYLALLHRY 468
            DL  F+ E  ++    Q   +S+    D     +  S E    +T   C +C N+AGKH YYG + C+SCR FFRR+V  + +  FKC+    C I+SKSWKSC+FCR+QKCLQ+GM+ A+V ++++         G  K    +  G + +   A+       +T+EE   + G+Y    + W     DF A   + YF   + VF  +L+ S E  P M+ S F       E     ++F   ++ +L   D+  L+  N  +++ L     +    D     + Y D     A+ +    +++ +  NF       DN    +     L+  D    SL+        E   + +      D I+  ++ Y+  +  +  + L++ +K+   Q  +L +L RY
Sbjct:   58 DLESFLHESNVVSKSPQISDDSEMCKSDVSFKQVSSSVEPEAIKTQLICLVCGNAAGKHCYYGGQVCVSCRAFFRRAVLGKSYSEFKCSKEEQCVINSKSWKSCRFCRFQKCLQSGMRIAWVTTEDKPS-------GPSKGSKAKPKGKLIVPTSAIQRSIQLKWTLEEECYVRGFYNHAWENWCHVITDFYARHPV-YFASIISVF--LLDFSVENNPFMTKSEFYGQMVNMELSFKRFWFTHPDMNDLCQADQEQLVNENNDLIFTLCRCVQYLNAQDVAKYSRLYRDRLKERASQDESCQNVVAMLSNFTLSDHPEDNITPNTTTSLCLLSADDESKSLESSLMTEIQE--WNRLFPHGPCDPIMQTLMGYLIIFDPNMKN-LQDYKKVCDIQTKFLHMLQRY 450          

BLAST of retinoid x vs. nr
Match: gi|657600342|gb|AID52832.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 135.191 bits (339), Expect = 3.342e-30
Identity = 115/386 (29.79%), Postives = 174/386 (45.08%), Query Frame = 0

Query:  529 RLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMC-KASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKRDKVLPISRGLDFEFTTEEE-------LKVMQ---IRNYAKTCK-----LNHMALTMAKDGGPLTVLWDVIFNKQNVPLKFLETVENREKALFQGISMGLEEMTEIDVEDRQTLVQENGSAFFAL--IMSLYSIPNNFKKLMNDLTRTLEQMSRTNPNVRLTNVLDTLEVLKLSPGN-HPTYETFYGNVSQSNKTLSEAHRALVTKIQHAVGSFENNPPDEMIVCLVILNLVFRSHGAKLHNKAKVERVQNNFAFMLYRYLKSRFAQKAGSKMAKALMLTTYTTE 895
            R+CQVCG  AG+HNYYGGQ C  CRAFFRR VQ       +C   S  C ++  +RR C  CR+ +CL  GM P W++SD ER  +R  K A    A  +   K  P+S  +     T  +       +K+M    +RN    C      +  MA+ M+  GG      D  F ++     F    +N    +FQ +S  L E   + V+D+Q LV+ NG    AL   +SL+     F          LE+  ++     L +    L+   +S       Y   + +   ++    E H  LV K+Q        +  D++ + L+ L ++F S    L     VE+ Q  F  +L +Y+K R+  +AG ++   LML +Y  E
Sbjct:   45 RICQVCGDEAGQHNYYGGQSCSGCRAFFRRIVQRDLQANLICVDNSNECVVNKSTRRRCQFCRFHRCLAIGMRPGWVLSDHERE-RRYRKTANGSHAVSIATQKS-PVSNRISLLVLTTNDNTHITAHMKMMDAHFVRNMDVVCAQKQDFIRKMAV-MSYFGGQS----DFEFYEE-----FYSLCDN---FVFQVMSSVL-EFRSLPVQDQQELVRVNGQYMVALKYAVSLHETDWCFVYF-------LERALKSGKFPYLNDFAQELDAFGMSEHKPRLMYSQVFSSPWAASAADEERHLFLVNKMQSWPRKDAQDRVDDVQMNLLKLIILFSSEFVNLQRPDIVEQTQMKFIGLLQKYMKFRYGPEAGVRLGNGLMLLSYAKE 407          

HSP 2 Score: 86.2705 bits (212), Expect = 5.032e-14
Identity = 33/84 (39.29%), Postives = 50/84 (59.52%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGN-CTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKER 212
            C +C + AG+H YYG ++C  CR FFRR VQ        C  + N C ++  + + C+FCR+ +CL  GM+P +V S  +R+ R
Sbjct:   47 CQVCGDEAGQHNYYGGQSCSGCRAFFRRIVQRDLQANLICVDNSNECVVNKSTRRRCQFCRFHRCLAIGMRPGWVLSDHERERR 130          

BLAST of retinoid x vs. nr
Match: gi|1325306415|ref|XP_023334818.1| (oxysterols receptor LXR-alpha-like [Eurytemora affinis])

HSP 1 Score: 120.168 bits (300), Expect = 9.642e-27
Identity = 60/161 (37.27%), Postives = 96/161 (59.63%), Query Frame = 0

Query:  520 KTEDESVSLRLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKRDKVL---PISRGLDFEFTTEEEL----KVMQIRNYAKTCKLNHMALTMAKD 673
            K E++    R C+VCG  AG+H+YYGGQVC SCRAFFRRSV + +   Y C  +G C+++SK+R+ C  CRY  C +AGM   W+++D E+++K    +    K   +  D+V     +S      F +E EL    ++++I ++ +T K+N M  T+ ++
Sbjct:   33 KDENDDDIFRACKVCGEEAGRHSYYGGQVCASCRAFFRRSVNSGANKAYFCVKNGNCEVNSKTRKQCQYCRYRLCEDAGMKTSWVLTDTEKKLKSSEGKEGKQKRNSIDYDEVSNPPSLSGESSSIFISETELVLINELVEISDFWETSKVNDMDTTLIRE 193          

HSP 2 Score: 92.8189 bits (229), Expect = 2.285e-17
Identity = 36/81 (44.44%), Postives = 55/81 (67.90%), Query Frame = 0

Query:  130 CPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRK 210
            C +C   AG+H+YYG + C SCR FFRRSV +  +  + C  +GNC ++SK+ K C++CRY+ C  AGMK ++V +  ++K
Sbjct:   44 CKVCGEEAGRHSYYGGQVCASCRAFFRRSVNSGANKAYFCVKNGNCEVNSKTRKQCQYCRYRLCEDAGMKTSWVLTDTEKK 124          

BLAST of retinoid x vs. nr
Match: gi|1325265241|ref|XP_023336689.1| (oxysterols receptor LXR-alpha-like [Eurytemora affinis])

HSP 1 Score: 119.398 bits (298), Expect = 5.099e-24
Identity = 53/92 (57.61%), Postives = 67/92 (72.83%), Query Frame = 0

Query:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMC-KASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAK 620
            +CQVCG  AGKH+YYGGQVC SCRAFFRRSVQ++ Y  + C   S +C I+  +R++C  CRY KCL  GM P WI+S+EE R++R H R K
Sbjct:  183 VCQVCGEKAGKHSYYGGQVCPSCRAFFRRSVQSRCYTGFRCINRSESCPINLLTRKNCQYCRYHKCLSCGMRPSWILSEEE-RIRRFHGRTK 273          

HSP 2 Score: 100.523 bits (249), Expect = 4.785e-18
Identity = 43/94 (45.74%), Postives = 62/94 (65.96%), Query Frame = 0

Query:  128 PKCPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTG-SGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQRYGSK 220
            P C +C   AGKH+YYG + C SCR FFRRSVQ++ +  F+C   S +C I+  + K+C++CRY KCL  GM+P+++ S+E+R  R   R   K
Sbjct:  182 PVCQVCGEKAGKHSYYGGQVCPSCRAFFRRSVQSRCYTGFRCINRSESCPINLLTRKNCQYCRYHKCLSCGMRPSWILSEEERIRRFHGRTKGK 275          

BLAST of retinoid x vs. nr
Match: gi|657600356|gb|AID52839.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 111.694 bits (278), Expect = 1.492e-21
Identity = 54/132 (40.91%), Postives = 76/132 (57.58%), Query Frame = 0

Query:  499 DPCSGEDVQAWSTLSESTLSPKTEDESVS-LRLCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQSYPTYMCKASGACDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREHKRAKVLKAKDVKR 629
            DP  G   Q    +  S    K E+  +S    C+VCG  A +H +YG   C SCRAFFRRS+QN+++  Y C+  G C+I  KSR++C  CRYE+CL AGM P W++S+EER  +    R K  +    ++
Sbjct:   55 DPGEGPSEQNDVRMHSSGKKCKKENPLISDTEKCRVCGEPAARHVHYGSVTCFSCRAFFRRSIQNKAWNNYSCRRQGQCEIMLKSRKNCQKCRYEECLSAGMKPTWVLSEEERSRRFRKTREKKARQNSTRK 186          

HSP 2 Score: 101.293 bits (251), Expect = 3.162e-18
Identity = 53/137 (38.69%), Postives = 76/137 (55.47%), Query Frame = 0

Query:  129 KCPICSNSAGKHTYYGARTCLSCRGFFRRSVQNQHHPIFKCTGSGNCTIDSKSWKSCKFCRYQKCLQAGMKPAYVQSQEQRKERILQ-----------RYGSKKSQP----------NQINGSMKL--QMHAVMAGT 242
            KC +C   A +H +YG+ TC SCR FFRRS+QN+    + C   G C I  KS K+C+ CRY++CL AGMKP +V S+E+R  R  +           R  ++ S+P          +QI GS KL  + H+ + G+
Sbjct:   87 KCRVCGEPAARHVHYGSVTCFSCRAFFRRSIQNKAWNNYSCRRQGQCEIMLKSRKNCQKCRYEECLSAGMKPTWVLSEEERSRRFRKTREKKARQNSTRKSNEGSEPETNNGQGNEDDQIPGSSKLDTRTHSTLHGS 223