pdz and lim domain protein 3, maker-scaffold452_size166894-snap-gene-0.46 (gene) Tigriopus kingsejongensis

Overview
Namepdz and lim domain protein 3
Unique Namemaker-scaffold452_size166894-snap-gene-0.46
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of pdz and lim domain protein 3 vs. L. salmonis genes
Match: EMLSAG00000002529 (supercontig:LSalAtl2s:LSalAtl2s14:1093206:1130691:1 gene:EMLSAG00000002529 transcript:EMLSAT00000002529 description:"augustus_masked-LSalAtl2s14-processed-gene-10.1")

HSP 1 Score: 110.153 bits (274), Expect = 8.062e-32
Identity = 51/90 (56.67%), Postives = 69/90 (76.67%), Query Frame = 0 
Query:   87 RGDHIVPSMNEAFPRKGQTQDTVTNIVDEFDAPSKDKPYWIRSIEEGNGLKNSNGFTTVGKPKMCSKQYNSPLEIYSEEALEEIMKEGTL 176
            RGD+I+P++  AFP+K  + +  +  +       K +PYWIRSIE G G+++S+GFTTVGKPK+ +KQYNSP E+YSEEAL+EIMKEGTL
Sbjct:    4 RGDNIIPNLELAFPKKKASPENSSESI-------KPRPYWIRSIESGQGVRSSSGFTTVGKPKISAKQYNSPFEMYSEEALDEIMKEGTL 86
[Close]
BLAST of pdz and lim domain protein 3 vs. L. salmonis genes
Match: EMLSAG00000011910 (supercontig:LSalAtl2s:LSalAtl2s83:648777:650831:1 gene:EMLSAG00000011910 transcript:EMLSAT00000011910 description:"maker-LSalAtl2s83-augustus-gene-6.20")

HSP 1 Score: 113.235 bits (282), Expect = 1.814e-31
Identity = 65/180 (36.11%), Postives = 105/180 (58.33%), Query Frame = 0 
Query:    1 MPKEMLTVEMSRRSGA--PWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIVPSMNEAFP-RKGQTQDTVTNIVDEFDAPSKDKPYWIRSIEEGNGLKN----SNGFTTVGKPKMCSKQYNSPLEIYSEEALEEIMKE 173
            MPKE++ + + +RSG   PWG  I GG+D+   + +  +   S A  +GL+T DY+ ++NG+ VF M+HN C + IK++G  L +  ERGDHIVP+  E +P +KG   +     ++          Y+  ++  G  L      +  FTTVGKP++   QY+ P+++YSE+ LEE+ +E
Sbjct:    1 MPKEIVNLAL-KRSGKNEPWGFVIIGGKDQNLTVKVGKIKPYSPAEEAGLKTMDYVWQINGKEVFEMSHNDCVKEIKESGTSLSLSTERGDHIVPNFEEIWPSKKGPKAERRKRGLE----------YYYDAMTNGPQLSGFLPLAPNFTTVGKPQIYVNQYDCPIQVYSEDTLEEMKEE 169
[Close]
BLAST of pdz and lim domain protein 3 vs. L. salmonis genes
Match: EMLSAG00000011749 (supercontig:LSalAtl2s:LSalAtl2s817:158330:174675:1 gene:EMLSAG00000011749 transcript:EMLSAT00000011749 description:"maker-LSalAtl2s817-snap-gene-1.11")

HSP 1 Score: 73.1738 bits (178), Expect = 8.973e-17
Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 0 
Query:    3 KEMLTVEMSRRSGAPWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAG-DHLVMK-------VERGDHIVPSMNEA 98
            K M+T  + R    P+G RI GG+D  R   +E V   S A  +GL+T DY+V V GQ+VF +NHN    LI+ AG D++  K       V++ DH++P +  A
Sbjct:    2 KRMITFTIRRSGREPFGFRIVGGKDAERTCRIEKVTLFSPAHEAGLQTHDYLVTVQGQTVFELNHNQVVGLIQGAGQDNVSWKRSLNPEPVKKRDHVLPRIQNA 105
[Close]
BLAST of pdz and lim domain protein 3 vs. L. salmonis genes
Match: EMLSAG00000012325 (supercontig:LSalAtl2s:LSalAtl2s8:1441031:1454035:1 gene:EMLSAG00000012325 transcript:EMLSAT00000012325 description:"augustus_masked-LSalAtl2s8-processed-gene-15.0")

HSP 1 Score: 46.9802 bits (110), Expect = 2.328e-7
Identity = 29/104 (27.88%), Postives = 48/104 (46.15%), Query Frame = 0 
Query:    1 MPKEMLTVEMSRRSGAPWGIRI-------------GGGQDR----GRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVER 87
            MPK+ML          PWG  +              G Q +    G  L + ++   + A+ +G+R+ D+I  +NG  VF M+    + LI+ +G+ L + VER
Sbjct:    1 MPKKMLPTLKRNSDAVPWGFTLLAEREVYENGAFWSGIQTKRLEEGNWLKVRSIRSDTPAYEAGIRSGDFITRINGNVVFYMDLKTIERLIRNSGNVLYLDVER 104
[Close]
BLAST of pdz and lim domain protein 3 vs. SwissProt
Match: gi|313471772|sp|A1ZA47.2|ZASP_DROME (RecName: Full=PDZ and LIM domain protein Zasp; AltName: Full=Z band alternatively spliced PDZ-motif protein)

HSP 1 Score: 75.0998 bits (183), Expect = 1.422e-14
Identity = 53/178 (29.78%), Postives = 92/178 (51.69%), Query Frame = 0 
Query:    4 EMLTVEMSRRSGAPWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGD-----HIVPSMNEAFPRKGQTQDTVTNIVDEFDAPSKDKPYWIRSIEEGNGLKN-----SNGFTTVGKPKMCSKQYNSPLEIYSEEALEEIM 171
            ++L +++SR    PWG R+ GG D  + L+++ V   S++  +GL+  D +V++N   VF + H   ++++ ++G++ V+ V+RG      H+ P+ N   P     Q TVT          +D      S   G G  N     SNG    G   + +KQYN+P+ IYS+E++ E +
Sbjct:    5 QLLQIKLSRFDAQPWGFRLQGGTDFAQPLLVQKVNAGSLSEQAGLQPGDAVVKINDVDVFNLRHKDAQDIVVRSGNNFVITVQRGGSTWRPHVTPTGNVPQPNSPYLQ-TVTKT--SLAHKQQD------SQHIGCGYNNAARPFSNGGDG-GVKSIVNKQYNTPVGIYSDESIAETL 172
[Close]
BLAST of pdz and lim domain protein 3 vs. SwissProt
Match: gi|82223291|sp|Q9PU47.1|PDLI3_CHICK (RecName: Full=PDZ and LIM domain protein 3; AltName: Full=Alpha-actinin-associated LIM protein)

HSP 1 Score: 61.2326 bits (147), Expect = 4.743e-10
Identity = 46/158 (29.11%), Postives = 73/158 (46.20%), Query Frame = 0 
Query:   16 APWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIV--PSMNEAFPRKGQTQDTVTNIVDEFDAPSKDKPYWIRSIEEGNGLKNSNGFTTVGKPKMCSKQYNSPLEIYSEEALEEIM 171
            APWG R+ GG D  + L++  +   S A T+ L   D IV +NG S   M HN  +E IK A   L +++ER +  +  P ++E     G+      N+  E   P + KP  I +                 K ++ S  YNSP+ +YS   +++ +
Sbjct:   11 APWGFRLSGGIDFNQPLIITRITPGSKASTANLCPGDIIVAINGLSTENMTHNDAQERIKAAAHQLSLRIERAETKLWSPQVSE----DGKANPYKINLEAE---PQEFKP--IGTAHNRRAQPFVAAANIDDKRQVVSSSYNSPIGLYSSGNIQDAL 159
[Close]
BLAST of pdz and lim domain protein 3 vs. SwissProt
Match: gi|75060928|sp|Q5E9E1.3|PDLI1_BOVIN (RecName: Full=PDZ and LIM domain protein 1; AltName: Full=Elfin)

HSP 1 Score: 58.151 bits (139), Expect = 5.902e-9
Identity = 56/220 (25.45%), Postives = 93/220 (42.27%), Query Frame = 0 
Query:    5 MLTVEMSRRSGAPWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIV--PSMNEAFPRKGQTQDTVTNIVDEFDAPSKDKPYWIRSIEEGNGLKNSNGFTTVGKPKMCSKQYNSPLEIYSEE-------ALE-EIMKEGTLNGKPFDISNLMNPSGKEFNEQESAVLAMIMANANKKKP 214
            M T+++  +   PWG R+ GG+D  + L +  V   S A    L   D I  ++G++   M H   +  IK   D++ + V R +  +  P + E    +G+      N+  E       +   I S    + +  +        P++ + QYN+P  +YS E       ALE +    G  NG+  D S L  PSG    ++ES V  M+       +P
Sbjct:    1 MTTLQIVLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAIGNLCVGDVITAIDGENTSNMTHLEAQNKIKGCTDNMTLTVARSEQKIWSPLVTE----EGKRHPYKMNLASE-----PQEALHIGSAHNRSAVPFTASPAFSSAPRVITNQYNNPAGLYSSENISSFNNALESKTAASGQENGRALDHSQL--PSGLVI-DKESEVYKMLQEKQELNEP 208
[Close]
BLAST of pdz and lim domain protein 3 vs. SwissProt
Match: gi|83288378|sp|Q3SYZ8.1|PDLI3_BOVIN (RecName: Full=PDZ and LIM domain protein 3)

HSP 1 Score: 56.225 bits (134), Expect = 2.229e-8
Identity = 45/165 (27.27%), Postives = 73/165 (44.24%), Query Frame = 0 
Query:   16 APWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIV--PSMNEAFPRKGQTQDTVTNIVDEFDAPSKDKPYWIRSIEEGNGLKNSNGFTTVGKPKMCSKQYNSPLEIYSEEALEEIMKEGTLNG 178
            APWG R+ GG D  + LV+  +   S A  + L   D I+ ++G     M H   ++ IK AG  L +K++R +  +  P + E     G+      N+  E   P + KP  I +                 K ++ S  YNSP+ +YS   +++ +  G L G
Sbjct:   11 APWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAAGHQLCLKIDRAEARLWSPQVTE----DGKAHPFKINLESE---PQEFKP--IGAAHNRRAQPFVAAANIDDKRQVVSASYNSPIGLYSTSNIQDAL-HGQLRG 165
[Close]
BLAST of pdz and lim domain protein 3 vs. SwissProt
Match: gi|212276492|sp|Q9H987.3|SYP2L_HUMAN (RecName: Full=Synaptopodin 2-like protein)

HSP 1 Score: 55.8398 bits (133), Expect = 5.507e-8
Identity = 27/73 (36.99%), Postives = 44/73 (60.27%), Query Frame = 0 
Query:   15 GAPWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVER 87
            GAPWG R+ GG ++ + L +  +   S A  +GLR RD ++ +NG S   ++H +   LI  +G+ LV+ V+R
Sbjct:   14 GAPWGFRLHGGAEQRKPLQVSKIRRRSQAGRAGLRERDQLLAINGVSCTNLSHASAMSLIDASGNQLVLTVQR 86
[Close]
BLAST of pdz and lim domain protein 3 vs. SwissProt
Match: gi|20178312|sp|O00151.4|PDLI1_HUMAN (RecName: Full=PDZ and LIM domain protein 1; AltName: Full=C-terminal LIM domain protein 1; AltName: Full=Elfin; AltName: Full=LIM domain protein CLP-36)

HSP 1 Score: 53.9138 bits (128), Expect = 1.474e-7
Identity = 53/221 (23.98%), Postives = 90/221 (40.72%), Query Frame = 0 
Query:    5 MLTVEMSRRSGAPWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIV--PSMNEAFPRKGQTQDTVTNIVDEFDAPSKDKPYWIRSIEEGNGLKNSNGFTTVGKPKMCSKQYNSPLEIYSEE-------ALEEIMKEGTL--NGKPFDISNLMNPSGKEFNEQESAVLAMIMANANKKKP 214
            M T ++  +   PWG R+ GG+D  + L +  V   S A  + L   D I  ++G++   M H   +  IK   D+L + V R +H V  P + E    +G+      N+  E       +   I S    + +  +    +    ++ + QYN+P  +YS E       ALE       +  N +P D +    P      ++ES V  M+       +P
Sbjct:    1 MTTQQIDLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKGCTDNLTLTVARSEHKVWSPLVTE----EGKRHPYKMNLASE-----PQEVLHIGSAHNRSAMPFTASPASSTTARVITNQYNNPAGLYSSENISNFNNALESKTAASGVEANSRPLDHA---QPPSSLVIDKESEVYKMLQEKQELNEP 209
[Close]
BLAST of pdz and lim domain protein 3 vs. SwissProt
Match: gi|82200966|sp|Q6GLJ6.1|PDLI3_XENLA (RecName: Full=PDZ and LIM domain protein 3)

HSP 1 Score: 53.1434 bits (126), Expect = 3.104e-7
Identity = 25/74 (33.78%), Postives = 40/74 (54.05%), Query Frame = 0 
Query:   16 APWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGD 89
            APWG R+ GG D  + LV+  +   S +  + L   D I+ ++G S   M H   ++ IK A D L +K++R +
Sbjct:   11 APWGFRLTGGIDFNQPLVISRITPGSKSSVANLCPGDVILAIDGFSTETMTHAEAQDRIKAATDQLCLKIDRAE 84
[Close]
BLAST of pdz and lim domain protein 3 vs. SwissProt
Match: gi|78099787|sp|O70400.4|PDLI1_MOUSE (RecName: Full=PDZ and LIM domain protein 1; AltName: Full=C-terminal LIM domain protein 1; AltName: Full=Elfin; AltName: Full=LIM domain protein CLP-36)

HSP 1 Score: 52.7582 bits (125), Expect = 3.518e-7
Identity = 42/167 (25.15%), Postives = 73/167 (43.71%), Query Frame = 0 
Query:    5 MLTVEMSRRSGAPWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIV--PSMNEAFPRKGQTQDTVTNIVDEFDAPSKDKPYWIRSIEEGNGLKNSNGFTTVGKP--KMCSKQYNSPLEIYSEEAL 167
            M T ++  +   PWG R+ GG+D  + L +  V   S A  + L   D I  ++G+    M H   +  IK   D++ + V R +  +  P + E    +G+      N+  E        P  +  I   +  +++  FT    P  ++ + QYNSP  +YS E +
Sbjct:    1 MTTQQIVLQGPGPWGFRLVGGKDFEQPLAISRVTPGSKAAIANLCIGDLITAIDGEDTSSMTHLEAQNKIKGCADNMTLTVSRSEQKIWSPLVTE----EGKRHPYKMNLASE--------PQEVLHIGSAHN-RSAMPFTASPAPSTRVITNQYNSPTGLYSSENI 154
[Close]
BLAST of pdz and lim domain protein 3 vs. SwissProt
Match: gi|81886792|sp|O70209.1|PDLI3_MOUSE (RecName: Full=PDZ and LIM domain protein 3; AltName: Full=Actinin-associated LIM protein; AltName: Full=Alpha-actinin-2-associated LIM protein)

HSP 1 Score: 52.7582 bits (125), Expect = 3.795e-7
Identity = 44/165 (26.67%), Postives = 73/165 (44.24%), Query Frame = 0 
Query:   16 APWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIV--PSMNEAFPRKGQTQDTVTNIVDEFDAPSKDKPYWIRSIEEGNGLKNSNGFTTVGKPKMCSKQYNSPLEIYSEEALEEIMKEGTLNG 178
            APWG R+ GG D  + LV+  +   S A  + L   D I+ ++G     M H   ++ IK A   L +K++R +  +  P ++E     G+      N+  E   P + KP  I +                 K ++ S  YNSP+ +YS   +++ +  G L G
Sbjct:   11 APWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAASYQLCLKIDRAETRLWSPQVSE----DGKAHPFKINLEAE---PQEFKP--IGTAHNRRAQPFVAAANIDDKRQVVSASYNSPIGLYSTSNIQDAL-HGQLRG 165
[Close]
BLAST of pdz and lim domain protein 3 vs. SwissProt
Match: gi|74740479|sp|Q53GG5.1|PDLI3_HUMAN (RecName: Full=PDZ and LIM domain protein 3; AltName: Full=Actinin-associated LIM protein; AltName: Full=Alpha-actinin-2-associated LIM protein)

HSP 1 Score: 52.373 bits (124), Expect = 5.150e-7
Identity = 25/74 (33.78%), Postives = 39/74 (52.70%), Query Frame = 0 
Query:   16 APWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGD 89
            APWG R+ GG D  + LV+  +   S A  + L   D I+ ++G     M H   ++ IK A   L +K++RG+
Sbjct:   11 APWGFRLSGGIDFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAAAHQLCLKIDRGE 84
[Close]
BLAST of pdz and lim domain protein 3 vs. nr
Match: gi|225713334|gb|ACO12513.1| (PDZ and LIM domain protein 3 [Lepeophtheirus salmonis])

HSP 1 Score: 245.743 bits (626), Expect = 1.796e-79
Identity = 116/206 (56.31%), Postives = 153/206 (74.27%), Query Frame = 0 
Query:    1 MPKEMLTVEMSR-RSGAPWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIVPSMNEAFPRKGQTQDTVTNIVDEFDAPSKDKPYWIRSIEEGNGLKNSNGFTTVGKPKMCSKQYNSPLEIYSEEALEEIMKEGTLNGKPFDISNLMNPSGKEFNEQESAVLAMI 205
            M KE + VE+ R     PWG+RIGGG+DRGRVLVLE V   S+A+T GLR +DYIVEVNG  VF + HN C  LIK AG  L +K+ERGD+I+P++  AFP+K  + +  +        P K +PYWIRSIE G G+++S+GFTTVGKPK+ +KQYNSP E+YSEEAL+EIMKEGTL+G P +  N+MNP+G+EF+  +S+VLA++
Sbjct:    1 MSKEFIEVELIRPNERTPWGLRIGGGKDRGRVLVLEKVTCPSLAYTKGLRAKDYIVEVNGVEVFDLEHNQCACLIKTAGTSLTIKIERGDNIIPNLELAFPKKKASPENSSE-------PIKPRPYWIRSIESGQGVRSSSGFTTVGKPKISAKQYNSPFEMYSEEALDEIMKEGTLDGNPINFDNIMNPTGREFDSNQSSVLALL 199
[Close]
BLAST of pdz and lim domain protein 3 vs. nr
Match: gi|1325272751|ref|XP_023321008.1| (PDZ and LIM domain protein 1-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 164.081 bits (414), Expect = 5.335e-47
Identity = 92/208 (44.23%), Postives = 127/208 (61.06%), Query Frame = 0 
Query:    3 KEMLTVEMSRR-SGAPWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIVPSMNEAFPRKGQTQDTVTNIVDEFDAPSKDKPYWIRSIE---EGNGLKNSNGFTTVGKPKMCSKQYNSPLEIYSEEALEEIMKEGTLNGKPFDISNLMNPSGKEFNEQESAVLAMIM 206
            K ++TV + R  +  PWG R+ GG+DRG    L  V   SVA   G +T DY+V++ G+ VF + H+     IKKAG+ L M VERG+ I P++NEAFP++ Q         +  +  +K KPY+ + +E   E  G KN  GFTTVGK KM +KQYNSPL +YSE+ ++EIM +GT  GK  D  N  N +GK F+  +S VL+ IM
Sbjct:   25 KGLITVTLRRENTNQPWGFRLQGGKDRGLPFQLLKVPLDSVASHCGCQTGDYLVKICGEEVFSLTHDQALSRIKKAGNELSMVVERGEKICPTINEAFPKQKQ---------EPVEVDTKPKPYYQQVLERTGEMPGQKN-KGFTTVGKAKMATKQYNSPLAMYSEDIIDEIMTQGTALGKEIDPGNPWNMTGKTFDAAKSGVLSAIM 222
[Close]
BLAST of pdz and lim domain protein 3 vs. nr
Match: gi|1325272753|ref|XP_023321009.1| (PDZ and LIM domain protein Zasp-like isoform X2 [Eurytemora affinis])

HSP 1 Score: 135.191 bits (339), Expect = 4.479e-36
Identity = 82/208 (39.42%), Postives = 115/208 (55.29%), Query Frame = 0 
Query:    3 KEMLTVEMSRR-SGAPWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIVPSMNEAFPRKGQTQDTVTNIVDEFDAPSKDKPYWIRSIE---EGNGLKNSNGFTTVGKPKMCSKQYNSPLEIYSEEALEEIMKEGTLNGKPFDISNLMNPSGKEFNEQESAVLAMIM 206
            K ++TV + R  +  PWG R                          L+T DY+V++ G+ VF + H+     IKKAG+ L M VERG+ I P++NEAFP++ Q         +  +  +K KPY+ + +E   E  G KN  GFTTVGK KM +KQYNSPL +YSE+ ++EIM +GT  GK  D  N  N +GK F+  +S VL+ IM
Sbjct:   25 KGLITVTLRRENTNQPWGFR--------------------------LQTGDYLVKICGEEVFSLTHDQALSRIKKAGNELSMVVERGEKICPTINEAFPKQKQ---------EPVEVDTKPKPYYQQVLERTGEMPGQKN-KGFTTVGKAKMATKQYNSPLAMYSEDIIDEIMTQGTALGKEIDPGNPWNMTGKTFDAAKSGVLSAIM 196
[Close]
BLAST of pdz and lim domain protein 3 vs. nr
Match: gi|225712494|gb|ACO12093.1| (PDZ and LIM domain protein 1 [Lepeophtheirus salmonis])

HSP 1 Score: 128.257 bits (321), Expect = 6.330e-33
Identity = 71/185 (38.38%), Postives = 109/185 (58.92%), Query Frame = 0 
Query:    3 KEMLTVEMSRRSGAPWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIVPSMNEAFPRKGQ-TQDTVTNIVDEF-DAPSKDKPYWIRSIEEGNGLKNSNGFTTVGKPKMCSKQYNSPLEIYSEEALEEIMKEG-----TLNGKP 180
            K M+T  + R    P+G RI GG+D  R   +E V   S A  +GL+T DY+V V GQ+VF +NHN    LI+ AG  L + VERGDHIVP+ +E + ++GQ T +    + ++  + P + K Y++ ++  G   K    FTTVGKP+    QY++P+  YSE+ + E+M++      +LN +P
Sbjct:    2 KRMITFTIRRSGREPFGFRIVGGKDAERTCRIEKVTLFSPAHEAGLQTHDYLVTVQGQTVFELNHNQVVGLIQGAGQVLEIIVERGDHIVPNFDELWGKQGQNTTNEHKTVAEQLQEGPQRGKEYFLHAMSAGLPGKKDTVFTTVGKPRAQVIQYDNPINCYSEDVINEMMEDNVSWKRSLNPEP 186
[Close]
BLAST of pdz and lim domain protein 3 vs. nr
Match: gi|1325330106|ref|XP_023346917.1| (uncharacterized protein LOC111715781 [Eurytemora affinis])

HSP 1 Score: 119.783 bits (299), Expect = 2.123e-31
Identity = 53/86 (61.63%), Postives = 75/86 (87.21%), Query Frame = 0 
Query:  121 KDKPYWIRSIEEGNGLKN-SNGFTTVGKPKMCSKQYNSPLEIYSEEALEEIMKEGTLNGKPFDISNLMNPSGKEFNEQESAVLAMI 205
            K   Y+++S+EEG G++  ++GF+TVGKPKM  KQYNSPL++YS+EA++EIM+EGTLNGKPFD++NLMNPSG EF++ +S VL++I
Sbjct:   13 KSTSYFMKSLEEGKGVRGVASGFSTVGKPKMAQKQYNSPLQMYSDEAIDEIMREGTLNGKPFDMNNLMNPSGAEFSQSDSLVLSLI 98
[Close]
BLAST of pdz and lim domain protein 3 vs. nr
Match: gi|1325278272|ref|XP_023323780.1| (PDZ and LIM domain protein 1-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 121.324 bits (303), Expect = 1.656e-30
Identity = 68/175 (38.86%), Postives = 101/175 (57.71%), Query Frame = 0 
Query:    1 MPKEMLTVEMSRRS-GAPWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIVPSMNEAFPRKGQTQDTVTNIVDEFDAPSKDKPYWIRSIEEGNGLKNSNGFTTVGKPKMC-SKQYNSPLEIYSEEALEEIMKE 173
            M K MLTV + R++   PWG  + GG D+G  L +  V   SVA  +GL   DY+ +VNGQSVFG+ H  C +LIK AG +L +++ERG++IVPS  + +  K Q     +  +   D  + D  Y     + G   K    FTTVGKP    +KQYN+P+++Y++  L E++ +
Sbjct:    1 MAKHMLTVHLRRKTTSTPWGFSLTGGPDQGFALKIGTVREESVADLAGLNKMDYLWKVNGQSVFGLTHKQCAQLIKSAGLNLDLEIERGENIVPSFTQIYKLKKQNS---SPQIQRKDCLTGDAYYKAAMKDHGLPGKIPTKFTTVGKPFFIENKQYNTPIDVYNDSVLNEMLHD 172
[Close]
BLAST of pdz and lim domain protein 3 vs. nr
Match: gi|669193515|gb|AII16463.1| (PDZ and LIM domain protein 3, partial [Paracyclopina nana])

HSP 1 Score: 119.783 bits (299), Expect = 4.313e-30
Identity = 68/178 (38.20%), Postives = 97/178 (54.49%), Query Frame = 0 
Query:    1 MPKEMLTVEMSRRS-GAPWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIVPSMNEAFPRKGQTQDTVTNIVDEFDAPSKDKPYWIRSIEEGNGLKN----SNGFTTVGKPKMCSKQYNSPLEIYSEEALEEIMKE 173
            MPKE+L + + R S   PWG  I GG+D+   + +  V   S A  +GL+  DYI  +NG+ VF M+HN C   IK  G  L +  ERGDHIVP+  E +P K   +          D P +   Y+  ++  G  L         FTTVGKP++   QY+SPL++YS++ LEE+ +E
Sbjct:    1 MPKEILNITIERPSTNVPWGFVIIGGKDQALTVKVGKVKPYSPAEKAGLKPCDYIYTINGREVFEMSHNECVNEIKNTGTTLCLSTERGDHIVPNFEEIWPSKKGPK---------ADRPKRGLEYYYDAMVNGPQLSGFLPIPPNFTTVGKPQIVVNQYDSPLDVYSDDTLEEMKEE 169
[Close]
BLAST of pdz and lim domain protein 3 vs. nr
Match: gi|225713230|gb|ACO12461.1| (PDZ and LIM domain protein 3 [Lepeophtheirus salmonis] >gi|225714146|gb|ACO12919.1| PDZ and LIM domain protein 3 [Lepeophtheirus salmonis] >gi|290462547|gb|ADD24321.1| PDZ and LIM domain protein 3 [Lepeophtheirus salmonis])

HSP 1 Score: 113.235 bits (282), Expect = 1.628e-27
Identity = 65/180 (36.11%), Postives = 105/180 (58.33%), Query Frame = 0 
Query:    1 MPKEMLTVEMSRRSGA--PWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIVPSMNEAFP-RKGQTQDTVTNIVDEFDAPSKDKPYWIRSIEEGNGLKN----SNGFTTVGKPKMCSKQYNSPLEIYSEEALEEIMKE 173
            MPKE++ + + +RSG   PWG  I GG+D+   + +  +   S A  +GL+T DY+ ++NG+ VF M+HN C + IK++G  L +  ERGDHIVP+  E +P +KG   +     ++          Y+  ++  G  L      +  FTTVGKP++   QY+ P+++YSE+ LEE+ +E
Sbjct:    1 MPKEIVNLAL-KRSGKNEPWGFVIIGGKDQNLTVKVGKIKPYSPAEEAGLKTMDYVWQINGKEVFEMSHNDCVKEIKESGTSLSLSTERGDHIVPNFEEIWPSKKGPKAERRKRGLE----------YYYDAMTNGPQLSGFLPLAPNFTTVGKPQIYVNQYDCPIQVYSEDTLEEMKEE 169
[Close]
BLAST of pdz and lim domain protein 3 vs. nr
Match: gi|290562191|gb|ADD38492.1| (PDZ and LIM domain protein 3 [Lepeophtheirus salmonis])

HSP 1 Score: 113.235 bits (282), Expect = 1.699e-27
Identity = 65/180 (36.11%), Postives = 105/180 (58.33%), Query Frame = 0 
Query:    1 MPKEMLTVEMSRRSGA--PWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIVPSMNEAFP-RKGQTQDTVTNIVDEFDAPSKDKPYWIRSIEEGNGLKN----SNGFTTVGKPKMCSKQYNSPLEIYSEEALEEIMKE 173
            MPKE++ + + +RSG   PWG  I GG+D+   + +  +   S A  +GL+T DY+ ++NG+ VF M+HN C + IK++G  L +  ERGDHIVP+  E +P +KG   +     ++          Y+  ++  G  L      +  FTTVGKP++   QY+ P+++YSE+ LEE+ +E
Sbjct:    1 MPKEIVNLAL-KRSGKNEPWGFVIIGGKDQNLTVKVGKIKPYSPAEEAGLKTMDYVWQINGKEVFEMSHNDCVKEIKESGTSLSLSTERGDHIVPNFEEIWPSKKGPKAERRKRGLE----------YYYDAMTNGPQLSGFLPLAPNFTTVGKPQIYVNQYDCPIQVYSEDTLEEMKEE 169
[Close]
BLAST of pdz and lim domain protein 3 vs. nr
Match: gi|1325293594|ref|XP_023330305.1| (PDZ and LIM domain protein 1-like [Eurytemora affinis])

HSP 1 Score: 112.849 bits (281), Expect = 3.078e-27
Identity = 68/184 (36.96%), Postives = 100/184 (54.35%), Query Frame = 0 
Query:    1 MPKEMLTVEMSRRSGAPWGIRIGGGQDRGRVLVLENVAYSSVAFTSGLRTRDYIVEVNGQSVFGMNHNACKELIKKAGDHLVMKVERGDHIVPSMNEAFPRKGQTQDTVTNIVDEFDAPSKDKPYWIRSIEEGNGLK----NSNGFTTVGKPKMCSKQYNSPLEIYSEEALEEIMKEGTLNGKP 180
            MPKEM+T  M R  GAPWG  I GG+D+   + L  +   S A  +GL+  DY+  +NGQ VF ++H+     IK AG  L M VERGDHIVP+  E +P + + +D       ++   +    Y++ ++ E +GLK        FTT GK  +   QYN P+E Y E  +EE+ ++  +   P
Sbjct:    1 MPKEMITAVMERAQGAPWGFVIVGGKDQALTVKLGRIKPYSPAEKAGLKEWDYVWSINGQEVFELSHSTIVNSIKNAGTRLEMVVERGDHIVPNFEEIWPTQ-RDKDA------KYKRNAIGMDYYMDAM-ENHGLKGHLPQPENFTTCGKLGIEINQYNCPIECYDEAVIEEMTEDREMLTNP 176
The following BLAST results are available for this feature:
BLAST of pdz and lim domain protein 3 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 4
Match NameE-valueIdentityDescription
EMLSAG000000025298.062e-3256.67supercontig:LSalAtl2s:LSalAtl2s14:1093206:1130691:... [more]
EMLSAG000000119101.814e-3136.11supercontig:LSalAtl2s:LSalAtl2s83:648777:650831:1 ... [more]
EMLSAG000000117498.973e-1739.42supercontig:LSalAtl2s:LSalAtl2s817:158330:174675:1... [more]
EMLSAG000000123252.328e-727.88supercontig:LSalAtl2s:LSalAtl2s8:1441031:1454035:1... [more]
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BLAST of pdz and lim domain protein 3 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
gi|313471772|sp|A1ZA47.2|ZASP_DROME1.422e-1429.78RecName: Full=PDZ and LIM domain protein Zasp; Alt... [more]
gi|82223291|sp|Q9PU47.1|PDLI3_CHICK4.743e-1029.11RecName: Full=PDZ and LIM domain protein 3; AltNam... [more]
gi|75060928|sp|Q5E9E1.3|PDLI1_BOVIN5.902e-925.45RecName: Full=PDZ and LIM domain protein 1; AltNam... [more]
gi|83288378|sp|Q3SYZ8.1|PDLI3_BOVIN2.229e-827.27RecName: Full=PDZ and LIM domain protein 3[more]
gi|212276492|sp|Q9H987.3|SYP2L_HUMAN5.507e-836.99RecName: Full=Synaptopodin 2-like protein[more]
gi|20178312|sp|O00151.4|PDLI1_HUMAN1.474e-723.98RecName: Full=PDZ and LIM domain protein 1; AltNam... [more]
gi|82200966|sp|Q6GLJ6.1|PDLI3_XENLA3.104e-733.78RecName: Full=PDZ and LIM domain protein 3[more]
gi|78099787|sp|O70400.4|PDLI1_MOUSE3.518e-725.15RecName: Full=PDZ and LIM domain protein 1; AltNam... [more]
gi|81886792|sp|O70209.1|PDLI3_MOUSE3.795e-726.67RecName: Full=PDZ and LIM domain protein 3; AltNam... [more]
gi|74740479|sp|Q53GG5.1|PDLI3_HUMAN5.150e-733.78RecName: Full=PDZ and LIM domain protein 3; AltNam... [more]

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BLAST of pdz and lim domain protein 3 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|225713334|gb|ACO12513.1|1.796e-7956.31PDZ and LIM domain protein 3 [Lepeophtheirus salmo... [more]
gi|1325272751|ref|XP_023321008.1|5.335e-4744.23PDZ and LIM domain protein 1-like isoform X1 [Eury... [more]
gi|1325272753|ref|XP_023321009.1|4.479e-3639.42PDZ and LIM domain protein Zasp-like isoform X2 [E... [more]
gi|225712494|gb|ACO12093.1|6.330e-3338.38PDZ and LIM domain protein 1 [Lepeophtheirus salmo... [more]
gi|1325330106|ref|XP_023346917.1|2.123e-3161.63uncharacterized protein LOC111715781 [Eurytemora a... [more]
gi|1325278272|ref|XP_023323780.1|1.656e-3038.86PDZ and LIM domain protein 1-like isoform X1 [Eury... [more]
gi|669193515|gb|AII16463.1|4.313e-3038.20PDZ and LIM domain protein 3, partial [Paracyclopi... [more]
gi|225713230|gb|ACO12461.1|1.628e-2736.11PDZ and LIM domain protein 3 [Lepeophtheirus salmo... [more]
gi|290562191|gb|ADD38492.1|1.699e-2736.11PDZ and LIM domain protein 3 [Lepeophtheirus salmo... [more]
gi|1325293594|ref|XP_023330305.1|3.078e-2736.96PDZ and LIM domain protein 1-like [Eurytemora affi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold452_size166894supercontigscaffold452_size166894:133404..134936 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold452_size166894-snap-gene-0.46-mRNA-1maker-scaffold452_size166894-snap-gene-0.46-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold452_size166894:133404..134936-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold452_size166894-snap-gene-0.46 ID=maker-scaffold452_size166894-snap-gene-0.46|Name=pdz and lim domain protein 3|organism=Tigriopus kingsejongensis|type=gene|length=1533bp|location=Sequence derived from alignment at scaffold452_size166894:133404..134936- (Tigriopus kingsejongensis)
AGCGAGTGGATCACCGCTTTGAATTGTCCTAAGCATCTTATCCCGGGTGT
CAAGAGGTCCGAAACAAGCCCAACGAACAGCACTTGCTCCTCACATAAAA
CACGCAGGGACAATCATCCTTGGAGAACGCCGACGAGGCAGGAATTCCGC
TTAACGTCCTCGAGGAGTGGTCTCTTCTCAACTTGGTGGTGGATAAGCTG
GTAATTGGTGCTCTCGTGTGGTGTCTCCAATTGGATCAATCATGCCCAAA
GAAATGCTCACAGTGGAGATGTCCCGCCGATCCGGAGCCCCTTGGGGCAT
TCGGATCGGGGGTGGACAAGACCGGGGTCGAGTGCTCGTCCTGGAAAATG
TAAGCACCCTTAATCCTGTTTCTACGAGAACCCTTGGGAACGGCTCCAGC
AGAACCAAGAGCCACCAAGGCACCTGTTCATGATGCACCTGCTCCCATTC
AGGTAGCCTACTCCTCGGTGGCCTTCACATCCGGACTCCGAACCCGGGAT
TACATCGTGGAAGTCAATGGCCAAAGTGTGTTTGGCATGAATCACAACGC
GTGTAAAGAGCTCATTAAAAAGGCTGGCGATCATCTCGTGATGAAGGTGG
AAAGGTAGACAGCATCATGGCACCTATGTGTGTTTGATATGAACATGACT
ATGATCTATCCAAATACTGAATTTCAGAGGGGATCACATTGTGCCTAGCA
TGAACGAGGCCTTCCCCCGGAAGGGTCAGACCCAAGACACCGTCACAAAT
ATCGTTGACGAGTTCGACGCACCGGTAAGACTCCATGTGGGCCCATCAAA
CACCGGATATGGGTGCTAAAGTCTGACCATGCTACCGTTTCAGAGCAAAG
ATAAACCGTATTGGATCCGTTCCATAGAGGAGGGAAATGGTTTGAAGAAT
TCGAATGGTTTTACCACGGTTGGCAAACCCAAAATGTGCTCGAAACAATA
CAACTCGCCATTGGAGATCTATTCGGAGGAAGCCCTCGAGGAGATTATGA
AAGAGGGAACTCTGAAGTGAGTGCCTGCGAGGAAGTCACGTTTGCGTTTA
CTTTCCCAGCCTGTTCGAATCTGGGATCAAAAATCATCTCCTGGTCGGGC
ATTGAAACCTATTCATTCTCTTGTTTCAGCGGCAAGCCCTTCGACATCAG
CAACTTGATGAATCCCAGCGGCAAGGAATTCAATGAGCAGGAATCCGCGG
TTTTAGCTATGATCATGGCCAACGCTAACAAGAAGAAGCCTTGAAACCTC
TTCTCCCAGCCACCAGAGTGATCCGGGGCCCCTTCGATACCAAACTACTA
ATTAAATCCCTGCTCCCCCTTGGTCGCGGAATCAAGCCTCGTACTCCATA
AAACTCCCTTGACTACCTGGAAGCCCATTCCACCCAGGAACAGCTCTTCC
CTTGGGCGCAGCCGAGTGATTGCTATCATGCTAAGCGTAGAACCGTAATC
AACGGCCTACCTGAAAGGGTCATTGTGTGAATGTCGTGAATGTCACTTGT
GAAACTTAAATAAATCACCTTCCGCCCAGTTCA
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Synonyms
The feature 'pdz and lim domain protein 3' has the following synonyms
Synonym
Tk11709
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