topoisomerase 1b, maker-scaffold462_size163801-snap-gene-0.41 (gene) Tigriopus kingsejongensis

Overview


Name	topoisomerase 1b
Unique Name	maker-scaffold462_size163801-snap-gene-0.41
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of topoisomerase 1b vs. L. salmonis genes
Match: EMLSAG00000000293 (supercontig:LSalAtl2s:LSalAtl2s1044:15439:19815:-1 gene:EMLSAG00000000293 transcript:EMLSAT00000000293 description:"maker-LSalAtl2s1044-snap-gene-0.46")

HSP 1 Score: 805.053 bits (2078), Expect = 0.000e+0
Identity = 453/770 (58.83%), Postives = 543/770 (70.52%), Query Frame = 0

Query:  179 RKEREDRHRSKGKETEEERRERKERERKERKEKEHKDREGTESQEDEDTNGQSEDPMDDDSQDSQA-----------------------SMKEEPMDGE-----DSEEDKPLARNSKKRKVNDDEDEFQPDDDDDEDVPIAKRKRVKKEEPRYKEEDDDYQEDVKPAKSKKKAKPEKKTPSKPASSSASSNPRGGKKVKKEENQEVWKWWEETTHKKDDGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQREKFRWAIEMAGPEYQF 920
            RKE+E RH+SK  ETEEERR RK++ER E++ ++ K+     S  +E +    ++ M  + Q+ Q                        + K+E M+ E     DSE+D PLA+ SK +K          D+D ++DVP++KRK+ K ++    E      +  K +K   K K E  +P+K           GG+K KKE+  EVWKWWEE   K DDGTKW+FL+H+GPLFAPDY+ LP  VHFYY  K+M+LS +TEEVA FY R ++H+YT KEVFNRN+ KDWRKVM  +E++II ++SKCDF+EI  ++KKVSEERK RSK+++KAEKE+N AIQ E+G C ID H EKIGNFRIEPP LFRGR      G + ++ S                                           NQI++V     S LK ++    YEKARELK  I KIRDDYT DFKSKEMRVRQRSVALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHITLH  KDG++Y VEFDFLGKDSIRY+N VPVEKRVFKNVQLFMENK+  DDLFDRLNT+ILNEYLN+LM GLTAKVFRT+NAS TLQ+QL +LTE DDNVPAKMLSYNRANR VA+LCNHQRA PKTH+KSM NLQ KI+ K++A  KAEK+ K AKK++KNGGS + K+ MDKKKKALER +EQL+KLETQAVDKEENK+IALGTSKLNYLDPRISVAW KKFDVPIEKVYNKTQR+KFRWAIEMAG +Y F
Sbjct:  169 RKEKEQRHKSK--ETEEERRVRKDKERAEKEARKRKEMGYDHSMGEEVSFHNHDEEMKMEQQEQQVKDEPQYEEELHEEQDEFEEDRYNNAKQENMEVEVKVQDDSEDDIPLAKKSKNKKRK------SRDEDSEDDVPLSKRKKPKVKKVERVE----VSKKSKSSKKNHKVKHEVVSPTKS----------GGRK-KKEDKVEVWKWWEE--EKVDDGTKWKFLQHRGPLFAPDYDRLPKGVHFYYNDKKMKLSSETEEVAGFYARXIEHEYTEKEVFNRNFFKDWRKVMTREERDIITNLSKCDFREINTYYKKVSEERKNRSKEEKKAEKEKNAAIQDEFGICVIDNHNEKIGNFRIEPPGLFRGR---YLVGFMDRKYSK-----------------------------------------SNQIRHV----KSFLKIKRGKGYYEKARELKSKIEKIRDDYTVDFKSKEMRVRQRSVALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHITLHTVKDGKDYCVEFDFLGKDSIRYHNIVPVEKRVFKNVQLFMENKRGEDDLFDRLNTTILNEYLNSLMKGLTAKVFRTFNASFTLQDQLEELTEADDNVPAKMLSYNRANRKVAILCNHQRAAPKTHDKSMQNLQDKIKAKREAXEKAEKDLKQAKKAYKNGGSTSEKVVMDKKKKALERTVEQLDKLETQAVDKEENKTIALGTSKLNYLDPRISVAWSKKFDVPIEKVYNKTQRDKFRWAIEMAGADYVF 865

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BLAST of topoisomerase 1b vs. SwissProt
Match: gi|12644118|sp|P11387.2|TOP1_HUMAN (RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase I)

HSP 1 Score: 805.823 bits (2080), Expect = 0.000e+0
Identity = 381/553 (68.90%), Postives = 453/553 (81.92%), Query Frame = 0

Query:  369 DGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKDE-DQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQREKFRWAIEMAGPEYQF 920
            +G KW+FLEHKGP+FAP YEPLP +V FYY+GK M+LS   EEVATF+ +MLDH+YTTKE+F +N+ KDWRK M  +EK II ++SKCDF ++  +FK  +E RK  SK+++   KE NE + KEYGFC +D H E+I NF+IEPP LFRGRG HPK GMLK+R+ PED+IINCSK++ +P PP G KWK+V+HDN VTWL  WTENIQ  IKY+MLNPSS++KGEKD  KYE AR LKK + KIR+ Y  D+KSKEM+VRQR+VALYFIDKLALRAGNEK+E + ADTVGCCSLRVEHI LHPE DGQEYVVEFDFLGKDSIRY N VPVEKRVFKN+QLFMENK+  DDLFDRLNT ILN++L  LM GLTAKVFRTYNASITLQ+QL +LT  D+N+PAK+LSYNRANRAVA+LCNHQRA PKT EKSM NLQTKI+ KK+ +  A ++ K+AK   K    A +K  ++ KKKA++RL EQL KLE QA D+EENK IALGTSKLNYLDPRI+VAWCKK+ VPIEK+YNKTQREKF WAI+MA  +Y+F
Sbjct:  213 EGIKWKFLEHKGPVFAPPYEPLPENVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKEYGFCIMDNHKERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDAKVPSPPPGHKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHINLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKHLQDLMEGLTAKVFRTYNASITLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQTKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAWCKKWGVPIEKIYNKTQREKFAWAIDMADEDYEF 765

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BLAST of topoisomerase 1b vs. SwissProt
Match: gi|38503303|sp|Q7YR26.1|TOP1_CHLAE (RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase I)

HSP 1 Score: 802.742 bits (2072), Expect = 0.000e+0
Identity = 380/553 (68.72%), Postives = 452/553 (81.74%), Query Frame = 0

Query:  369 DGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKDE-DQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQREKFRWAIEMAGPEYQF 920
            +G KW+FLEHKGP+FAP YEPLP  V FYY+GK M+LS   EEVATF+ +MLDH+YTTKE+F +N+ KDWRK M  +EK II ++SKCDF ++  +FK  +E RK  SK+++   KE NE + KEYGFC +D H E+I NF+IEPP LFRGRG HPK GMLK+R+ PED+IINCSK++ +P PP G KWK+V+HDN VTWL  WTENIQ  IKY+MLNPSS++KGEKD  KYE AR LKK + KIR+ Y  D+KSKEM+VRQR+VALYFIDKLALRAGNEK+E + ADTVGCCSLRVEHI LHPE DGQEYVVEFDFLGKDSIRY N VPVEKRVFKN+QLFMENK+  DDLFDRLNT ILN++L  LM GLTAKVFRTYNASITLQ+QL +LT  D+N+PAK+LSYNRANRAVA+LCNHQRA PKT EKSM NLQ+KI+ KK+ +  A ++ K+AK   K    A +K  ++ KKKA++RL EQL KLE QA D+EENK IALGTSKLNYLDPRI+VAWCKK+ VPIEK+YNKTQREKF WAI+MA  +Y+F
Sbjct:  215 EGIKWKFLEHKGPVFAPPYEPLPDSVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNEEKNIITNLSKCDFTQMSQYFKAQTEARKQMSKEEKLKIKEENEKLLKEYGFCIMDNHKERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDAKVPSPPPGHKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHINLHPELDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKHLQDLMEGLTAKVFRTYNASITLQQQLKELTAPDENIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQSKIDAKKEQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAWCKKWGVPIEKIYNKTQREKFAWAIDMADEDYEF 767

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BLAST of topoisomerase 1b vs. SwissProt
Match: gi|158518540|sp|Q04750.2|TOP1_MOUSE (RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase I)

HSP 1 Score: 799.275 bits (2063), Expect = 0.000e+0
Identity = 380/553 (68.72%), Postives = 448/553 (81.01%), Query Frame = 0

Query:  369 DGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKDE-DQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQREKFRWAIEMAGPEYQF 920
            +G KW+FLEHKGP+FAP YEPLP  V FYY+GK M+LS   EEVATF+ +MLDH+YTTKE+F +N+ KDWRK M   EK  I ++SKCDF ++  +FK  SE RK  SK+++   KE NE + KEYGFC +D H E+I NF+IEPP LFRGRG HPK GMLK+R+ PED+IINCSK++ +P PP G KWK+V+HDN VTWL  WTENIQ  IKY+MLNPSS++KGEKD  KYE AR LKK + KIR+ Y  D+KSKEM+VRQR+VALYFIDKLALRAGNEK+E + ADTVGCCSLRVEHI LHPE DGQEYVVEFDF GKDSIRY N VPVEKRVFKN+QLFMENK+  DDLFDRLNT ILN++L  LM GLTAKVFRTYNASITLQ+QL +LT  D+NVPAK+LSYNRANRAVA+LCNHQRA PKT EKSM NLQ+KI+ KKD +  A ++ K+AK   K    A +K  ++ KKKA++RL EQL KLE QA D+EENK IALGTSKLNYLDPRI+VAWCKK+ VPIEK+YNKTQREKF WAI+M   +Y+F
Sbjct:  215 EGIKWKFLEHKGPVFAPPYEPLPESVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNDEKNTITNLSKCDFTQMSQYFKAQSEARKQMSKEEKLKIKEENEKLLKEYGFCVMDNHRERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDAKVPSPPPGHKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHINLHPELDGQEYVVEFDFPGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKHLQDLMEGLTAKVFRTYNASITLQQQLKELTAPDENVPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQSKIDAKKDQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAWCKKWGVPIEKIYNKTQREKFAWAIDMTDEDYEF 767

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BLAST of topoisomerase 1b vs. SwissProt
Match: gi|51316560|sp|Q9WUL0.1|TOP1_RAT (RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase I)

HSP 1 Score: 798.505 bits (2061), Expect = 0.000e+0
Identity = 381/553 (68.90%), Postives = 448/553 (81.01%), Query Frame = 0

Query:  369 DGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKDE-DQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQREKFRWAIEMAGPEYQF 920
            +G KW+FLEHKGP+FAP YEPLP  V FYY+GK M+LS   EEVATF+ +MLDH+YTTKE+F +N+ KDWRK M   EK  I ++SKCDF ++  +FK  SE RK  SK+++   KE NE + KEYGFC +D H E+I NF+IEPP LFRGRG HPK GMLK+R+ PED+IINCSK++ +P PP G KWK+V+HDN VTWL  WTENIQ  IKY+MLNPSS++KGEKD  KYE AR LKK + KIR+ Y  D+KSKEM+VRQR+VALYFIDKLALRAGNEK+E + ADTVGCCSLRVEHI LHPE DGQEYVVEFDF GKDSIRY N VPVEKRVFKN+QLFMENK+  DDLFDRLNT ILN++L  LM GLTAKVFRTYNASITLQ+QL +LT  D+NVPAK+LSYNRANRAVA+LCNHQRA PKT EKSM NLQ+KI+ KKD +  A K+ K+AK   K    A +K  ++ KKKA++RL EQL KLE QA D+EENK IALGTSKLNYLDPRI+VAWCKK+ VPIEK+YNKTQREKF WAI+M   +Y+F
Sbjct:  215 EGIKWKFLEHKGPVFAPPYEPLPEGVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNDEKNTITNLSKCDFTQMSQYFKAQSEARKQMSKEEKLKIKEENEKLLKEYGFCVMDNHRERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDAKVPSPPPGHKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHINLHPELDGQEYVVEFDFPGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKHLQDLMEGLTAKVFRTYNASITLQQQLKELTAPDENVPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQSKIDAKKDQLADARKDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAWCKKWGVPIEKIYNKTQREKFAWAIDMTDEDYEF 767

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BLAST of topoisomerase 1b vs. SwissProt
Match: gi|586107|sp|Q07050.1|TOP1_CRIGR (RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase I)

HSP 1 Score: 797.349 bits (2058), Expect = 0.000e+0
Identity = 379/553 (68.54%), Postives = 448/553 (81.01%), Query Frame = 0

Query:  369 DGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKDE-DQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQREKFRWAIEMAGPEYQF 920
            +G KW+FLEHKGP+FAP YEPLP  V FYY+GK M+LS   EEVATF+ +MLDH+YTTKE+F +N+ KDWRK M   EK +I ++SKCDF ++  +FK  SE RK  SK+++   KE NE + KEYGFC +D H E+I NF+IEPP LFRGRG HPK GMLK+R+ PED+IINCSK++ +P PP G KWK+V+HDN VTWL  WTENIQ  IKY+MLNPSS++KGEKD  KYE AR LKK + KIR+ Y  D+KSKEM+VRQR+VALYFIDKLALRAGNEK+E + ADTV CCSLRVEHI LHPE DGQEYVVEFDF GKDSIRY N VPVEKRVFKN+QLFMENK+  DDLFDRLNT ILN++L  LM GLTAKVFRTYNASITLQ+QL +LT  D+NVPAK+LSYNRANRAVA+LCNHQRA PKT EKSM NLQ+KI+ KKD +  A ++ K+AK   K    A +K  ++ KKKA++RL EQL KLE QA D+EENK IALGTSKLNYLDPRI+VAWCKK+ VPIEK+YNKTQREKF WAI+M   +Y+F
Sbjct:  215 EGIKWKFLEHKGPVFAPPYEPLPEGVKFYYDGKVMKLSPKAEEVATFFAKMLDHEYTTKEIFRKNFFKDWRKEMTNDEKNVITNLSKCDFTQMSQYFKDQSEARKQMSKEEKLKIKEENEKLLKEYGFCVMDNHRERIANFKIEPPGLFRGRGNHPKMGMLKRRIMPEDIIINCSKDAKVPSPPPGHKWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKKCVDKIRNQYREDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVSCCSLRVEHINLHPELDGQEYVVEFDFPGKDSIRYYNKVPVEKRVFKNLQLFMENKQPEDDLFDRLNTGILNKHLQDLMEGLTAKVFRTYNASITLQQQLKELTAPDENVPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQSKIDAKKDQLADARRDLKSAKADAKVMKDAKTKKVVESKKKAVQRLEEQLMKLEVQATDREENKQIALGTSKLNYLDPRITVAWCKKWGVPIEKIYNKTQREKFAWAIDMTDEDYEF 767

[Close]

BLAST of topoisomerase 1b vs. SwissProt
Match: gi|1174739|sp|P41512.1|TOP1_XENLA (RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase I)

HSP 1 Score: 772.311 bits (1993), Expect = 0.000e+0
Identity = 362/537 (67.41%), Postives = 433/537 (80.63%), Query Frame = 0

Query:  369 DGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKDE-DQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQR 904
            DG KW+FLEHKGP+FAP YEP+P +V FYY+G  ++LS   EEVATF+ +MLDH+YTTK++F +N+ KDW+K M   E+ +I ++SKCDF  + ++FK+ SE RK  +K+++   K  NE + +EYG+C +D H E+I NFRIEPP LFRGRG+HPK G LKKR+ PED+IINCSK+S IP  P G KWK+V+HD  VTWL  WTENIQ  IKY+MLNPSS++KGEKD  KYE AR LK  + KIR+ Y  D+KSKEM+VRQR+VALYFIDKLALRAGNEK+E + ADTVGCCSLRVEHI L  E DGQE+VVEFDF GKDSIRY N VPVEKRVFKN+QLFMENK+  DDLFDRLNTSILN++L  LM GLTAKVFRTYNASITLQ+QL++LT  DDNVPAK+LSYNRANRAVA+LCNHQRA PKT EKSM NLQ KI+ KKD +  A +EFK+AK   K      +K  ++ KKKA++R+ EQL KLE QA D+EENK IALGTSKLNYLDPRISVAWCKK+ VPIEK+YNKTQR
Sbjct:  269 DGIKWKFLEHKGPVFAPPYEPVPDNVKFYYDGNLVKLSPKAEEVATFFAKMLDHEYTTKDIFRKNFFKDWKKEMTTDERNLITNLSKCDFNAMSLYFKEQSEARKNMTKEEKLKIKAENERLLQEYGYCIMDNHKERIANFRIEPPGLFRGRGDHPKMGKLKKRIMPEDIIINCSKDSKIPVAPAGHKWKEVRHDGKVTWLVSWTENIQGSIKYIMLNPSSRIKGEKDWQKYETARRLKMCVEKIRNTYKEDWKSKEMKVRQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRVEHINLFQELDGQEFVVEFDFPGKDSIRYYNKVPVEKRVFKNLQLFMENKQPDDDLFDRLNTSILNKHLQDLMEGLTAKVFRTYNASITLQQQLDELTNSDDNVPAKILSYNRANRAVAILCNHQRAPPKTFEKSMMNLQGKIDAKKDQLADARREFKSAKADAKVRRDEKTKKLVESKKKAVQRIEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAWCKKYGVPIEKIYNKTQR 805

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BLAST of topoisomerase 1b vs. SwissProt
Match: gi|20140694|sp|Q969P6.1|TOP1M_HUMAN (RecName: Full=DNA topoisomerase I, mitochondrial; Short=TOP1mt; Flags: Precursor)

HSP 1 Score: 772.311 bits (1993), Expect = 0.000e+0
Identity = 365/593 (61.55%), Postives = 455/593 (76.73%), Query Frame = 0

Query:  329 TPSKPASSSASSNPRGGKKVKKEENQEVWKWWEETTHKKDDGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEK-DEDQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQREKFRWAIEMAGPEYQF 920
             P +PAS        G ++ +K         WE+  H  +DG KW+ LEHKGP FAP YEPLP  V F+YEG+ +RLS   EEVATFYGRMLDH+YTTKEVF +N+  DWRK M  +E+E+I+ + KCDF EI  +F   +  RK  S+++++  KE  E +Q+E+G+C +DGH EKIGNF+IEPP LFRGRG+HPK GMLK+R++PEDV+INCS++S IP+PP G +WK+V+ DNTVTWLA WTE++QN IKY+MLNP SKLKGE    K+E AR L+  + +IR  Y AD+KS+EM+ RQR+VALYFIDKLALRAGNEK D + ADTVGCCSLRVEH+ LHPE DG ++VVEFDFLGKD IRY N VPVEK V+KN+QLFMENK   DDLFDRL T+ LN++L  LM GLTAKVFRTYNASITLQEQL  LT  +D++ AK+LSYNRANR VA+LCNHQRA P T EKSM NLQTKI+ KK+ V +A  E + A+  HK  G   S+  ++KK++ LE+L EQL +L  QA DKEENK +ALGTSKLNYLDPRIS+AWCK+F VP+EK+Y+KTQRE+F WA+ MAG +++F
Sbjct:   19 VPRRPASRGVP----GSRRTQKGSGAR----WEKEKH--EDGVKWRQLEHKGPYFAPPYEPLPDGVRFFYEGRPVRLSVAAEEVATFYGRMLDHEYTTKEVFRKNFFNDWRKEMAVEEREVIKSLDKCDFTEIHRYFVDKAAARKVLSREEKQKLKEEAEKLQQEFGYCILDGHQEKIGNFKIEPPGLFRGRGDHPKMGMLKRRITPEDVVINCSRDSKIPEPPAGHQWKEVRSDNTVTWLAAWTESVQNSIKYIMLNPCSKLKGETAWQKFETARRLRGFVDEIRSQYRADWKSREMKTRQRAVALYFIDKLALRAGNEKEDGEAADTVGCCSLRVEHVQLHPEADGCQHVVEFDFLGKDCIRYYNRVPVEKPVYKNLQLFMENKDPRDDLFDRLTTTSLNKHLQELMDGLTAKVFRTYNASITLQEQLRALTRAEDSIAAKILSYNRANRVVAILCNHQRATPSTFEKSMQNLQTKIQAKKEQVAEARAELRRARAEHKAQGDGKSRSVLEKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAWCKRFRVPVEKIYSKTQRERFAWALAMAGEDFEF 601

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BLAST of topoisomerase 1b vs. SwissProt
Match: gi|267147|sp|P30189.1|TOP1_DROME (RecName: Full=DNA topoisomerase 1; AltName: Full=DNA topoisomerase I)

HSP 1 Score: 769.229 bits (1985), Expect = 0.000e+0
Identity = 364/555 (65.59%), Postives = 438/555 (78.92%), Query Frame = 0

Query:  366 KKDDGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQREKFRWAIEMAGPEYQF 920
            K+ DG KW  LEHKGP+FAP YE +P +V FYY+GK + LS++TEE ATFY +ML+HDY TKEVFN N+ KD+RK M  +E+EII+D  KC+F+E+  +F+  SE+RK  SK+++  +K  NEA+ KE+GFC IDGH EKIGNFR+EPP LFRGRGEHPK GM+K+R+   DV INC K+S +P PP G +WK+V+HDNTVTWLA W EN+Q Q+KY+MLNPSSKLKGEKD  KYE AR L K+I KIR  Y  ++KSKEMRVRQR+VALYFIDKLALRAGNEKDEDQADTVGCCSLRVEH+ LH E +G+E VV FDF GKDSIRY N V VEKRVFKN++LFME+KK GDDLFDRLNT +LNE+L  LM GLTAKVFRTYNAS TLQ QL+ LT+    VP K+L+YNRANRAVA+LCNHQR+VPK+HEKSM NL+ KI+ K++A+ K E E+ +                 +KK K LERL +QL KLE Q  D++ENK+IALGTSKLNYLDPRISVAWCKK DVPIEK++NKTQR KF WA+ MA   Y+F
Sbjct:  433 KRADGVKWSTLEHKGPVFAPRYERVPRNVRFYYDGKPLELSEETEEAATFYAKMLNHDYCTKEVFNNNFFKDFRKSMTPREREIIKDFRKCNFQEMFNYFQAESEKRKAASKEEKLIKKNENEALMKEFGFCMIDGHKEKIGNFRLEPPGLFRGRGEHPKMGMIKRRIQASDVSINCGKDSKVPSPPPGSRWKEVRHDNTVTWLASWIENVQGQVKYIMLNPSSKLKGEKDHIKYETARRLDKVIDKIRATYRDEWKSKEMRVRQRAVALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHVQLHKELNGKENVVVFDFPGKDSIRYYNEVEVEKRVFKNLELFMEHKKEGDDLFDRLNTQVLNEHLKELMEGLTAKVFRTYNASKTLQSQLDLLTDPSATVPEKLLAYNRANRAVAILCNHQRSVPKSHEKSMENLKEKIKAKREAIEKCESEYHSRD---------------EKKGKQLERLRDQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAWCKKHDVPIEKIFNKTQRTKFLWAVHMADENYRF 972

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BLAST of topoisomerase 1b vs. SwissProt
Match: gi|259533973|sp|A9Q1D5.1|TOP1M_PANTR (RecName: Full=DNA topoisomerase I, mitochondrial; Short=TOP1mt; Flags: Precursor)

HSP 1 Score: 766.533 bits (1978), Expect = 0.000e+0
Identity = 363/593 (61.21%), Postives = 453/593 (76.39%), Query Frame = 0

Query:  329 TPSKPASSSASSNPRGGKKVKKEENQEVWKWWEETTHKKDDGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEK-DEDQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQREKFRWAIEMAGPEYQF 920
             P +PAS        G ++ +K         WE+  H  +DG KW+ LEHKGP FAP YEPLP  V F+YEGK +RLS   EEVATFYGRML H+YTTKEVF +N+  DWRK M  +E+E+I+ + KCDF EI  +F   +  RK  S+++++  KE  E +Q+E+G+C +DGH EKIGNF+IEPP LFRGRG+HPK GMLK+R+ PEDV+INCS++S IP+PP G +WK+V+ DNTVTWLA WTE++QN IKY+MLNP SKLKGE    K+E AR L+  + +IR  Y AD+KS+EM+ RQR+VALYFIDKLALRAGNEK D + ADTVGCCSLRVEH+ LHPE DG ++VVEFDFLGKD IRY N VPVEK V+KN+QLFME+K   D+LFDRL T+ LN++L  LM GLTAKVFRTYNASITLQEQL  LT  +D++ AK+LSYNRANR VA+LCNHQRA P T EKSM NLQTKI+ KK+ V +A  E + A+  HK  G   S+  ++KK++ LE+L EQL +L  QA DKEENK +ALGTSKLNYLDPRIS+AWCK+F VP+EK+Y+KTQRE+F WA+ MAG +++F
Sbjct:   19 VPRRPASRGVP----GSRRTQKGSGAR----WEKEKH--EDGVKWRQLEHKGPYFAPPYEPLPDGVRFFYEGKPVRLSVAAEEVATFYGRMLGHEYTTKEVFRKNFFNDWRKEMAVEEREVIKSLDKCDFTEIHRYFVDKAAARKVLSREEKQKLKEEAEKLQREFGYCILDGHQEKIGNFKIEPPGLFRGRGDHPKMGMLKRRIMPEDVVINCSRDSKIPEPPAGHQWKEVRSDNTVTWLAAWTESVQNSIKYIMLNPCSKLKGETAWQKFETARRLRGFVDEIRSQYRADWKSREMKTRQRAVALYFIDKLALRAGNEKEDGEAADTVGCCSLRVEHVQLHPEADGCQHVVEFDFLGKDCIRYYNRVPVEKPVYKNLQLFMESKGPRDNLFDRLTTTSLNKHLQELMDGLTAKVFRTYNASITLQEQLRALTRAEDSIAAKILSYNRANRVVAILCNHQRATPSTFEKSMQNLQTKIQAKKEQVAEARAELRRARAEHKAQGDGKSRSVLEKKRRLLEKLQEQLAQLSVQATDKEENKQVALGTSKLNYLDPRISIAWCKRFRVPVEKIYSKTQRERFAWALAMAGEDFEF 601

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BLAST of topoisomerase 1b vs. SwissProt
Match: gi|81872302|sp|Q6IM78.1|TOP1M_RAT (RecName: Full=DNA topoisomerase I, mitochondrial; Short=TOP1mt; Flags: Precursor)

HSP 1 Score: 716.457 bits (1848), Expect = 0.000e+0
Identity = 344/562 (61.21%), Postives = 426/562 (75.80%), Query Frame = 0

Query:  360 WEETTHKKDDGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKDE-DQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQREKFRWAIEMAGPEYQF 920
            W ET+       KW+ LEHKGP FAP YEPLP  V F+Y+GK +RLS   EEVATFYG+ML  + TTKEVF RN+  DW+K M  +E+++I  + KCDF EI  HF + +E R+   ++ ++  KE  E +Q+E+G+C +DGH EKIGNF+ EPP LFRGRG+HPK GMLK+RV PEDV+INCS++S IP+PP G +WK+V+ DNTV WLA W ENIQN  KY++LNPSSK KGE D  KYE AR LK ++ KIR  Y AD+KS EM+ RQ +VALYFIDKLALR GNEK+E + ADTVGCCSLRVEH+ LH   DGQE+VVE DFLGKDSIRY N V VEK VF+N+Q FME+K   DDLFD L TS LN++L  LM GLTAKVFRTYNASITLQEQL  LT  +D++  K+L+YNRANRAVAVLCNHQRA+PKT E+SM  LQ KIE KK  V +A+ E + A+   +  G + SK  + K+++ L +L EQL +L T+A DKEENK +ALGT+KLNYLDPRIS+AWCK+F VP+EK+YNKTQRE+F WA   AG +++F
Sbjct:   36 WGETS---KSSVKWKQLEHKGPCFAPAYEPLPDGVRFFYDGKPVRLSLAAEEVATFYGKMLHLECTTKEVFRRNFFSDWQKEMTAEERKLITHLDKCDFSEIHRHFMERAEARRTLPREQKQKLKEEAEKLQQEFGYCILDGHREKIGNFKTEPPGLFRGRGDHPKMGMLKRRVMPEDVVINCSRDSKIPEPPAGHQWKEVRSDNTVMWLAAWVENIQNSFKYIILNPSSKPKGEMDWQKYEVARRLKGVVDKIRAQYQADWKSPEMKKRQLAVALYFIDKLALRTGNEKEEGETADTVGCCSLRVEHVRLHTPADGQEHVVELDFLGKDSIRYKNHVTVEKLVFQNLQHFMEDKDPRDDLFDALTTSSLNKHLQDLMEGLTAKVFRTYNASITLQEQLRVLTRAEDSLTCKVLAYNRANRAVAVLCNHQRAIPKTFEESMQTLQKKIETKKAQVAEAQVELQKAETDLRMRGDSKSKSFLQKQQRLL-KLEEQLARLCTKATDKEENKQVALGTAKLNYLDPRISIAWCKRFGVPVEKIYNKTQRERFAWAFNQAGEDFEF 593

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BLAST of topoisomerase 1b vs. nr
Match: gi|943957613|ref|XP_014361563.1| (PREDICTED: DNA topoisomerase I, mitochondrial [Papilio machaon] >gi|930672073|gb|KPJ12715.1| DNA topoisomerase 1 [Papilio machaon])

HSP 1 Score: 889.026 bits (2296), Expect = 0.000e+0
Identity = 479/843 (56.82%), Postives = 596/843 (70.70%), Query Frame = 0

Query:  103 KKEGKRPETEEERRIRKEKERKDRE-DRSKKEGRREETDEERKIRK----EKEKKDRDDRPKRDGKRDESEEERKIRKERER-KEREDRHRSKGKETEEERRERKERERKERKEKEHKDREGTESQEDEDTNGQSEDPMDDDSQDSQASMKEEPMDGEDSEEDKPLARNSKKRKVNDDE-DEFQPDDDDDEDVPIAKRKRVKKEEPRYKEEDDDYQE--------DVKPAKSKKKAKPE-----KKTPSKPASSSASSNPRGG-----KKVKKEENQEVWKWWEETTHKKDDGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQREKFRWAIEMAGPEYQF 920
            K  G + E  E+ + R +K+R  ++  RS KE  RE++D ++        EK+   +D    R+ K   S +++   KER++   R D+HRS    +  ++   K++ER      +H+D+  +E    E      ++PM  D  + +  +KEE  DG ++      + +    +  D+   E  P+ + +ED P+ +R   KK      EED    +          +P     + + +     KK P K  S+   + P  G     +K K+EE QEVWKWWEE   KKDDGTKW FLEHKGP+FAPDYEPLP +V F Y+GK ++LSQD EEVA FY RMLDHDYTTK  FN N+  DWRK+M  +E ++I+D++KCDFKE+  +F  VSE+ + R+K+++ A K +NE IQKEYGFCTIDGH EKIGNFRIEPP LFRGRGEHPK GMLK+RV PEDV+INCSK+S IPKPP G KWK+V+HDNTVTWLA WTEN+Q Q KYVMLNPSSKLKGEKD  KYE AR+L K I KIR+ Y  D+K+KEMRVRQR+VALYFID+LALRAGNEKD+DQADTVGCCSLRVEHI LH EKDG+EYVV FDFLGKDSIRY N VPVEKRVFKN++LFMENKK  DDLFDRLNT  LNE+L  LMPGLTAKVFRTYNASITLQ QL++LT+ + ++P K+L+YNRANRAVAVLCNHQRAVPK H KSM  L+ KI+ K+D +++AE++ + A K+ K  GS   KI  DKKK ALERL EQL KLE Q  D++ENK+IALGTSKLNYLDPRISVAWCKK  VPIEK+YNKTQR+KFRWAI+MA  EY F
Sbjct:   91 KDRGDQRERSEKSKDRSDKDRSSKDKHRSDKEKHREKSDHDKHKHSSSDGEKKSSSKDKERDREHKSSSSSKDKDKSKERDKDHHRNDKHRSDKHSSSRDKHRSKDKERSS----DHQDKIKSELDYKESV---KDEPMQIDDHEIKREIKEESEDGYNAGNTTVSSCDYSMSQFKDEPLSELPPEGESEEDTPLLERMGAKKRLASESEEDTPLLQRKKSKKKVKKEPTYDDDEDEDDIPKKKKKKPEKSKSTKVKTEPNDGPSPTKRKKKQEEEQEVWKWWEE--EKKDDGTKWNFLEHKGPVFAPDYEPLPENVKFRYDGKIVKLSQDAEEVAGFYARMLDHDYTTKSTFNNNFFADWRKMMTHEEAKLIKDLNKCDFKEMHAYFLSVSEKNRNRTKEEKAAIKAKNEEIQKEYGFCTIDGHKEKIGNFRIEPPGLFRGRGEHPKMGMLKRRVMPEDVLINCSKDSKIPKPPPGHKWKEVRHDNTVTWLASWTENVQGQTKYVMLNPSSKLKGEKDWQKYETARKLHKCIDKIRETYKNDWKAKEMRVRQRAVALYFIDRLALRAGNEKDDDQADTVGCCSLRVEHIQLHKEKDGKEYVVVFDFLGKDSIRYYNEVPVEKRVFKNLELFMENKKDSDDLFDRLNTQTLNEHLKDLMPGLTAKVFRTYNASITLQRQLDELTDPNASIPEKILAYNRANRAVAVLCNHQRAVPKGHSKSMEALKEKIQAKRDQIDEAEEDLREATKAAKR-GSVKEKIAADKKKTALERLKEQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAWCKKHGVPIEKIYNKTQRDKFRWAIDMATSEYVF 923

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BLAST of topoisomerase 1b vs. nr
Match: gi|913304894|ref|XP_013182884.1| (PREDICTED: DNA topoisomerase I, mitochondrial isoform X3 [Amyelois transitella])

HSP 1 Score: 889.026 bits (2296), Expect = 0.000e+0
Identity = 459/707 (64.92%), Postives = 539/707 (76.24%), Query Frame = 0

Query:  222 QEDEDTNGQSEDPMDDDSQDSQASMKEEPMDG----EDSEEDKPLARNSKKRKVNDDEDEFQPDDDDDEDVPIAKRKRVKKE----EPRYKEEDDDYQEDVKPAKSKKKAKPEKKTPSKPASSSASSNPRGGKKVKKEENQEVWKWWEETTHKKDDGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQREKFRWAIEMAGPEYQF 920
            +E ED  G   +        + +  K+EP+      EDSEED PL      +K        +P  + +ED+P+ +RK++KK+    EP Y +E+D+  +  K     +K K  K+ P +  S +           K+EE QEVWKWWEE   KKDDGTKW FLEHKGPLFAP YEPLPS+V F Y+GK +RLSQD EEVA FY RMLDHDYTTK+ FN N+  DWRKVM ++E ++I ++SKCDFKE+  +F  VSE+ K R+K+++ A K +NE IQKEYGFCTIDGH EKIGNFRIEPP LFRGRGEHPK GMLK+RV PEDV+INCSK+S IPKPP G KWK+V+HDNTVTWLA WTEN+Q Q KYVMLNPSSKLKGEKD  KYE AR+L K I KIRD Y  D+K+KEMRVRQR+VALYFID+LALRAGNEKD+DQADTVGCCSLRVEHI LH EKDGQE+VV FDFLGKDSIRY N V VEKRVFKN++LFMENKK  DDLFDRLNT  LNE+L  LMPGLTAKVFRTYNASITLQ QL++LT+   ++P K+L+YNRANRAVAVLCNHQRAVPK H KSM  L+ KI+ K+D V +AE++ K A K+ K  GS   KI  DKKKKALERL EQL KLE Q  D++ENK+IALGTSKLNYLDPRISVAWCKK  VPIEK+YNKTQR+KFRWAI+MAGPEY F
Sbjct:  259 EEPEDGYGGFNNTTMSSCDYNLSQFKDEPLSELPQEEDSEEDIPLLERMASKK--------RPASESEEDIPLLQRKKLKKKKVKKEPIYDDEEDEEIKPKKKKIKPEKRKSIKQEPDEVVSPTKKKK-------KQEEEQEVWKWWEE--EKKDDGTKWTFLEHKGPLFAPPYEPLPSNVKFRYDGKEVRLSQDAEEVAGFYARMLDHDYTTKDTFNNNFFADWRKVMTKEETKLITNLSKCDFKEMQAYFLSVSEKNKNRTKEEKAALKAKNEEIQKEYGFCTIDGHKEKIGNFRIEPPGLFRGRGEHPKMGMLKRRVMPEDVLINCSKDSKIPKPPAGHKWKEVRHDNTVTWLASWTENVQGQSKYVMLNPSSKLKGEKDWQKYETARKLHKCIDKIRDTYRNDWKAKEMRVRQRAVALYFIDRLALRAGNEKDDDQADTVGCCSLRVEHIELHKEKDGQEHVVVFDFLGKDSIRYYNEVAVEKRVFKNLELFMENKKDSDDLFDRLNTQTLNEHLKELMPGLTAKVFRTYNASITLQRQLDELTDAKASIPEKILAYNRANRAVAVLCNHQRAVPKGHSKSMEALKEKIQAKRDQVEEAERDLKDATKAAKR-GSEKEKIICDKKKKALERLKEQLKKLELQETDRDENKTIALGTSKLNYLDPRISVAWCKKHGVPIEKIYNKTQRDKFRWAIDMAGPEYVF 947

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BLAST of topoisomerase 1b vs. nr
Match: gi|820859978|ref|XP_012346873.1| (PREDICTED: DNA topoisomerase I, mitochondrial [Apis florea])

HSP 1 Score: 888.641 bits (2295), Expect = 0.000e+0
Identity = 449/672 (66.82%), Postives = 531/672 (79.02%), Query Frame = 0

Query:  254 EDSEEDKPL-----ARNSKKRKVNDDEDEFQPDDDDDEDVPIAKRKRVKKEEPRYKEEDDDYQEDVKPAKSKKKAKPEKKTPSKPASSSASSNPRGGKKVKKEENQEVWKWWEETTHKKDDGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQREKFRWAIEMAGPEYQF 920
            E+S+ED PL     A  S KR +         D ++++DVP++ RK+ KK + + K++   Y++D    + ++K K +    SK  +SS    PR   K K+EE QEVWKWWEE   KK+DGTKW FLEHKGP+FAP YEPLP  V+FYY GK M+LSQD EEVATFY RMLDHDYTTK  FN N+  DWR+VM E E+  I D+SKC+FKEI  +F + SEERK  +K++++  KE+NE IQKEYG+C IDGH EKIGNF+IEPP LFRGRGEHPK G LKKRV PED++INCSK+S+IPKPP G KWK+++HD  VTWLA WTENIQ Q+KYVMLNPSSKLKGEKD  KYE AR+L +LI KIR +Y  D+KSKEMR+RQR+VALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHITLH +KDG+EYVV FDFLGKDSIRY N VPVEKRVFKN+QLFMENK   DDLFDRLNT+++N++LN LM GLTAKVFRTYNAS TLQ+QL++LT  DD    K+LSYNRANRAVA+LCNHQR+VPKTH KSM NL+ KIE KK A+N AE   K AK+  K+ GS   K+  +KKKKAL+RL EQL KLE QA DKEENK IALGTSKLNYLDPRI+VAWCKK +VPIEK+YNKTQR+KFRWAI+MAGP+Y F
Sbjct:  373 EESDEDVPLSARSMAPTSIKRSL---------DSEEEDDVPLSARKKSKKSDTKTKKKKRKYEDDEDEDEIEQKPKKKGARTSKGENSS----PR---KKKQEEEQEVWKWWEEE--KKNDGTKWTFLEHKGPVFAPPYEPLPPDVNFYYNGKEMKLSQDAEEVATFYARMLDHDYTTKPAFNSNFFHDWREVMTESERAKIVDLSKCNFKEIHAYFIQKSEERKAMTKEEKQKIKEKNEEIQKEYGYCIIDGHKEKIGNFKIEPPGLFRGRGEHPKMGKLKKRVMPEDILINCSKDSNIPKPPPGHKWKEIRHDPNVTWLASWTENIQGQVKYVMLNPSSKLKGEKDWQKYEIARKLAQLIDKIRAEYREDWKSKEMRIRQRAVALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHITLHEQKDGKEYVVVFDFLGKDSIRYYNEVPVEKRVFKNLQLFMENKSPSDDLFDRLNTTVMNKHLNELMEGLTAKVFRTYNASWTLQQQLDKLTNPDDTEAEKILSYNRANRAVAILCNHQRSVPKTHAKSMENLKAKIEAKKQAINDAELAVKDAKRDAKH-GSVKEKVTYEKKKKALDRLKEQLTKLEVQATDKEENKEIALGTSKLNYLDPRITVAWCKKHNVPIEKIYNKTQRDKFRWAIDMAGPDYVF 1025

[Close]

BLAST of topoisomerase 1b vs. nr
Match: gi|1227957624|ref|XP_021922637.1| (DNA topoisomerase I, mitochondrial isoform X1 [Zootermopsis nevadensis] >gi|646723372|gb|KDR24006.1| DNA topoisomerase 1 [Zootermopsis nevadensis])

HSP 1 Score: 888.256 bits (2294), Expect = 0.000e+0
Identity = 443/640 (69.22%), Postives = 522/640 (81.56%), Query Frame = 0

Query:  281 DDDDDEDVPIAKRKRVKKEEPRYKEEDDDYQEDVKPAKSKKKAKPEKKTPSKPASSSASSNPRGGKKVKKEENQEVWKWWEETTHKKDDGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQREKFRWAIEMAGPEYQF 920
            +D DD+DVP+  RK++KKE  + KEE D+ +      KSKK    E+ TP         S+PR  KK K+EE QEVWKWWEE   KKDDGTKW+FLEHKGP+FAP Y+ LP  + F+Y+GK M LS+ TEEVA+FY RMLDHDYTTKE FN+N+ KDWRKVM +KEKE I D+SKC+FK++  +F   +EERK  SK+++K  K++NE I KEYGFC IDGH E+IGNF+IEPP LFRGRGEHPK GMLKKRV PEDVIINCSK+S IPKPP+G KW++++HD  VTWLA WTEN+Q Q+KYVMLNPSSKLKGEKD  KYE AR+L K I KIR +Y  DFKSKEMR+RQR+VALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHI+LH +KDG++YVV FDF GKDSIRY N V VEKRVFKN+QLFM+NK  GDDLFDRLNT++LN++LN LM GLTAKVFRTYNAS TLQEQL++LT+ D  V  K+L+YNRANRAVA+LCNHQRAVPKTH KSM NL+ KI+ KK+ V  AE+++K  K  HK  GSA +KI+M+K+KKALE+L EQL KLE QA DKEENK IAL TSKLNYLDPRISVAWCKK +VPIEK+YNKTQR+KFRWAI+MAGP+Y F
Sbjct:  333 EDSDDDDVPLMARKKIKKESKKQKEESDEEEFKPVKKKSKKGNVKEEITPQ--------SSPR--KKKKEEEQQEVWKWWEE--EKKDDGTKWKFLEHKGPVFAPLYDRLPPDIKFFYDGKEMTLSEPTEEVASFYARMLDHDYTTKEAFNKNFFKDWRKVMTDKEKERITDLSKCNFKQMHKYFLAKAEERKAMSKEEKKKLKDQNEEIVKEYGFCVIDGHTERIGNFKIEPPGLFRGRGEHPKMGMLKKRVIPEDVIINCSKDSKIPKPPDGHKWREIRHDKNVTWLASWTENVQGQVKYVMLNPSSKLKGEKDWQKYETARKLAKCIEKIRQEYQDDFKSKEMRIRQRAVALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHISLHSQKDGKDYVVVFDFPGKDSIRYYNEVSVEKRVFKNLQLFMQNKSTGDDLFDRLNTTVLNKHLNELMEGLTAKVFRTYNASFTLQEQLDKLTDPDYTVQEKILAYNRANRAVAILCNHQRAVPKTHAKSMENLKGKIDAKKEMVQDAERQYKDVKHEHKRNGSAKNKIDMEKRKKALEKLREQLAKLELQATDKEENKEIALSTSKLNYLDPRISVAWCKKHNVPIEKIYNKTQRDKFRWAIDMAGPDYVF 960

[Close]

BLAST of topoisomerase 1b vs. nr
Match: gi|1227957628|ref|XP_021922656.1| (DNA topoisomerase I, mitochondrial isoform X3 [Zootermopsis nevadensis])

HSP 1 Score: 887.871 bits (2293), Expect = 0.000e+0
Identity = 443/640 (69.22%), Postives = 522/640 (81.56%), Query Frame = 0

Query:  281 DDDDDEDVPIAKRKRVKKEEPRYKEEDDDYQEDVKPAKSKKKAKPEKKTPSKPASSSASSNPRGGKKVKKEENQEVWKWWEETTHKKDDGTKWQFLEHKGPLFAPDYEPLPSHVHFYYEGKRMRLSQDTEEVATFYGRMLDHDYTTKEVFNRNYMKDWRKVMNEKEKEIIRDISKCDFKEIGVHFKKVSEERKGRSKDDRKAEKERNEAIQKEYGFCTIDGHVEKIGNFRIEPPSLFRGRGEHPKQGMLKKRVSPEDVIINCSKNSDIPKPPEGRKWKKVQHDNTVTWLACWTENIQNQIKYVMLNPSSKLKGEKDMAKYEKARELKKLIHKIRDDYTADFKSKEMRVRQRSVALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHITLHPEKDGQEYVVEFDFLGKDSIRYNNCVPVEKRVFKNVQLFMENKKAGDDLFDRLNTSILNEYLNTLMPGLTAKVFRTYNASITLQEQLNQLTEEDDNVPAKMLSYNRANRAVAVLCNHQRAVPKTHEKSMTNLQTKIEGKKDAVNKAEKEFKAAKKSHKNGGSATSKINMDKKKKALERLMEQLNKLETQAVDKEENKSIALGTSKLNYLDPRISVAWCKKFDVPIEKVYNKTQREKFRWAIEMAGPEYQF 920
            +D DD+DVP+  RK++KKE  + KEE D+ +      KSKK    E+ TP         S+PR  KK K+EE QEVWKWWEE   KKDDGTKW+FLEHKGP+FAP Y+ LP  + F+Y+GK M LS+ TEEVA+FY RMLDHDYTTKE FN+N+ KDWRKVM +KEKE I D+SKC+FK++  +F   +EERK  SK+++K  K++NE I KEYGFC IDGH E+IGNF+IEPP LFRGRGEHPK GMLKKRV PEDVIINCSK+S IPKPP+G KW++++HD  VTWLA WTEN+Q Q+KYVMLNPSSKLKGEKD  KYE AR+L K I KIR +Y  DFKSKEMR+RQR+VALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHI+LH +KDG++YVV FDF GKDSIRY N V VEKRVFKN+QLFM+NK  GDDLFDRLNT++LN++LN LM GLTAKVFRTYNAS TLQEQL++LT+ D  V  K+L+YNRANRAVA+LCNHQRAVPKTH KSM NL+ KI+ KK+ V  AE+++K  K  HK  GSA +KI+M+K+KKALE+L EQL KLE QA DKEENK IAL TSKLNYLDPRISVAWCKK +VPIEK+YNKTQR+KFRWAI+MAGP+Y F
Sbjct:  299 EDSDDDDVPLMARKKIKKESKKQKEESDEEEFKPVKKKSKKGNVKEEITPQ--------SSPR--KKKKEEEQQEVWKWWEE--EKKDDGTKWKFLEHKGPVFAPLYDRLPPDIKFFYDGKEMTLSEPTEEVASFYARMLDHDYTTKEAFNKNFFKDWRKVMTDKEKERITDLSKCNFKQMHKYFLAKAEERKAMSKEEKKKLKDQNEEIVKEYGFCVIDGHTERIGNFKIEPPGLFRGRGEHPKMGMLKKRVIPEDVIINCSKDSKIPKPPDGHKWREIRHDKNVTWLASWTENVQGQVKYVMLNPSSKLKGEKDWQKYETARKLAKCIEKIRQEYQDDFKSKEMRIRQRAVALYFIDKLALRAGNEKDEDQADTVGCCSLRVEHISLHSQKDGKDYVVVFDFPGKDSIRYYNEVSVEKRVFKNLQLFMQNKSTGDDLFDRLNTTVLNKHLNELMEGLTAKVFRTYNASFTLQEQLDKLTDPDYTVQEKILAYNRANRAVAILCNHQRAVPKTHAKSMENLKGKIDAKKEMVQDAERQYKDVKHEHKRNGSAKNKIDMEKRKKALEKLREQLAKLELQATDKEENKEIALSTSKLNYLDPRISVAWCKKHNVPIEKIYNKTQRDKFRWAIDMAGPDYVF 926

The following BLAST results are available for this feature:

BLAST of topoisomerase 1b vs. L. salmonis genes
BLAST of topoisomerase 1b vs. SwissProt
BLAST of topoisomerase 1b vs. nr

BLAST of topoisomerase 1b vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAG00000000293	0.000e+0	58.83	supercontig:LSalAtl2s:LSalAtl2s1044:15439:19815:-1...	[more]

BLAST of topoisomerase 1b vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 21


Match Name	E-value	Identity	Description
gi\|12644118\|sp\|P11387.2\|TOP1_HUMAN	0.000e+0	68.90	RecName: Full=DNA topoisomerase 1; AltName: Full=D...	[more]
gi\|38503303\|sp\|Q7YR26.1\|TOP1_CHLAE	0.000e+0	68.72	RecName: Full=DNA topoisomerase 1; AltName: Full=D...	[more]
gi\|158518540\|sp\|Q04750.2\|TOP1_MOUSE	0.000e+0	68.72	RecName: Full=DNA topoisomerase 1; AltName: Full=D...	[more]
gi\|51316560\|sp\|Q9WUL0.1\|TOP1_RAT	0.000e+0	68.90	RecName: Full=DNA topoisomerase 1; AltName: Full=D...	[more]
gi\|586107\|sp\|Q07050.1\|TOP1_CRIGR	0.000e+0	68.54	RecName: Full=DNA topoisomerase 1; AltName: Full=D...	[more]
gi\|1174739\|sp\|P41512.1\|TOP1_XENLA	0.000e+0	67.41	RecName: Full=DNA topoisomerase 1; AltName: Full=D...	[more]
gi\|20140694\|sp\|Q969P6.1\|TOP1M_HUMAN	0.000e+0	61.55	RecName: Full=DNA topoisomerase I, mitochondrial; ...	[more]
gi\|267147\|sp\|P30189.1\|TOP1_DROME	0.000e+0	65.59	RecName: Full=DNA topoisomerase 1; AltName: Full=D...	[more]
gi\|259533973\|sp\|A9Q1D5.1\|TOP1M_PANTR	0.000e+0	61.21	RecName: Full=DNA topoisomerase I, mitochondrial; ...	[more]
gi\|81872302\|sp\|Q6IM78.1\|TOP1M_RAT	0.000e+0	61.21	RecName: Full=DNA topoisomerase I, mitochondrial; ...	[more]

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BLAST of topoisomerase 1b vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|943957613\|ref\|XP_014361563.1\|	0.000e+0	56.82	PREDICTED: DNA topoisomerase I, mitochondrial [Pap...	[more]
gi\|913304894\|ref\|XP_013182884.1\|	0.000e+0	64.92	PREDICTED: DNA topoisomerase I, mitochondrial isof...	[more]
gi\|820859978\|ref\|XP_012346873.1\|	0.000e+0	66.82	PREDICTED: DNA topoisomerase I, mitochondrial [Api...	[more]
gi\|1227957624\|ref\|XP_021922637.1\|	0.000e+0	69.22	DNA topoisomerase I, mitochondrial isoform X1 [Zoo...	[more]
gi\|1227957628\|ref\|XP_021922656.1\|	0.000e+0	69.22	DNA topoisomerase I, mitochondrial isoform X3 [Zoo...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold462_size163801	supercontig	scaffold462_size163801:34541..41233 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:nucleobase-containing compound metabolic process

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold462_size163801-snap-gene-0.41-mRNA-1	maker-scaffold462_size163801-snap-gene-0.41-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold462_size163801:34541..41233-

gene from alignment at scaffold462_size163801:34541..41233-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold462_size163801-snap-gene-0.41 ID=maker-scaffold462_size163801-snap-gene-0.41|Name=topoisomerase 1b|organism=Tigriopus kingsejongensis|type=gene|length=6693bp|location=Sequence derived from alignment at scaffold462_size163801:34541..41233- (Tigriopus kingsejongensis)
AGAAAATCGAGCTGTGAGCGTCTAAGTGCCATTGCGAACAGGAACTTAGG
CTCTCGCGAGGAGCGAAGGGAGGTGATCGCTTCTGCCATCTTTGCCACTC
GGTGAGCTCGAAGAAATAGAGTCAAACCCTCGGGAAAATGGGAGAAAATG
GTGTGGAGACCACTCTGATGAACGGGAATAATGTAAGTAGAGCTCGTTCA
GCCCAGCCCCACGCTGCTAATGGCCGTGCGCGTGGAGGCCACGCTCCAGG
CCACGCGCACGGCCACGCGCCAGGCCACGCACTGACCCTCACTCAAGCCC
TGCTCTTTTTTCCACCTTCCAGGGCAGCACGGATCACGGGGATGCGGGTA
AGTCGAGGCCAAGTGCGATAAGGGAAGCCGAGCTCGACCTCGTCCCCGGC
TAGCCGTGCACGGGCTAGCAGGGGGCCCCGGCCCACGGCACTAGGTGGCG
TAAGAGCTTCATGGCTGACTTGGGAACACCCAGGGTTGGATCGCTGCCAT
GTGGCGACGGTGGGTGAATGGAGATGCCCTAAACCGGGCTATGTCCCATA
AGCGAGGGATACTTGTAAAAAAAATCCGTTCCGAAACGGATCAAAACTGG
CAAGCATGTCACCATTCATCCAGCGACCTGACCCATGTTGGCCTTTCAGA
CGTGAAGAACGGCTTCCACGAGGGCAAATCCGAACACCGGAGTAGTTCCT
CGTCCAAGCACAAGAGCAAGGACAAGGAGAGGCGAAAGGAAACCGAGGAA
GAGCGGCGAATTCGCAAGGACAAGGAGAAGAAGGATCGGGACGATCGCCA
TAAAAAAGAAGGCAGACGAGAGGAAACCGAAGAAGAGAGGAAAATCCGGA
AGGAAAAGGAAAGACGTGAGCGTGAGGAACGATACAAGAAGGAAGGGAAA
CGTCCCGAAACTGAGGAAGAGCGCCGCATCCGCAAGGAAAAGGAACGCAA
GGACCGAGAAGACCGCTCCAAGAAGGAAGGCCGCAGGGAGGAGACCGACG
AAGAACGCAAAATCCGGAAGGAAAAAGAGAAAAAGGATCGTGATGACCGG
CCCAAACGCGATGGGAAACGAGATGAGTCTGAGGAAGAGCGCAAGATCCG
GAAAGAAAGAGAACGCAAGGAGCGTGAAGAGTAAGTAGTGGCCACAGATC
GGACCGATAAGACCGTTTGTGTGGAGTCATTTATTTGATCACTCATCAAT
AGTAATGTACAGGCACAATTTATGTCATTTGTCAGGCCGGTGCACTCCTA
TTTACAATCTGACGGGTTAGATTGGCTAGAGGGGTGCTGCTATTGCCAGC
TTAATAGCAACTGGCTTGTCCTTGGCGCGCATCGTACGATCCGGAAAGAA
CTTGGGAGATTAATGAGTATGTTGTTGACGTTTTCTAGCCGCCATCGTTC
TAAAGGCAAAGAAACCGAAGAGGAAAGGCGAGAGCGCAAGGAAAGGGAAC
GGAAAGAGCGGAAAGAGAAGGAGCATAAAGATCGTGAAGGGACCGAGTCC
CAGGAAGATGAGGACACAAACGGGCAATCCGAAGATCCCATGGACGACGA
CTCCCAGGATTCGCAGGCCTCCATGAAAGAAGAGCCCATGGATGGCGAGG
ACAGTGAAGAGGATAAGCCTCTGGTGAGCACTCGAAATGAAAATGACCGA
TTCATCACTGATAACCCTTAATGGCCAATACTATTTATCAACATGGCGCA
AAAACACGCCGGAGCTTGACCACGAACATCATTGCCAAGTAATTATGGTC
TCAATGTTTAGAATATGGTCAGCCAGGTATGTTGGCTTGAATCAATAGAA
ATCATGCCAATTTGACCGAAGAAAGACTTAGTGGCTGTCGTCGAAAGTAT
GTGCCGAATGCTGGCATTATGTACCTAACGCCATGCCCATGCTCTTCCCG
CCTTATGTGCTGGCGATGGTCTGGAATGCCCAATTAGCGGTACAATCTAA
GGCATTTTAATCCTGTAGGTCGGTGCCACGGTAACGATGAGACCTGCTTC
AGCCACGCCGAGCACTTGTCTCAGAACGTTACTCTGTTAGTGAGCCATCA
TTAGTATAATGTATTCATAATCGGGTTGGTCTTTTAGCAAGTACCTTAGT
GAACAGAAATCAATCGGCTCCATTCTTCTCGTGTTTTTAGGCCAGAAATT
CCAAGAAGCGCAAAGTGAATGATGATGAGGACGAATTTCAACCAGATGAT
GATGATGACGAAGATGTCCCTATTGCCAAGAGGAAGCGTGTCAAGAAGGA
AGAGCCCAGGTACAAAGAGGAGGACGATGACTACCAAGAGGATGTCAAAC
CCGCCAAGTCCAAGAAAAAGGCCAAGCCAGAGAAGAAGACTCCATCCAAA
CCAGCCTCTTCCTCGGCCAGTTCAAATCCGAGAGGTGGGAAAAAGGTGAA
GAAGGAAGAAAACCAAGAAGTGTGGAAATGGTGGGAGGAGACGACCCACA
AGAAGGACGATGGCACCAAGTGGCAGTTCCTAGAACACAAGGGTCCCCTT
TTCGCGCCAGACTACGAGCCTCTACCTAGTCATGTTCACTTCTATTACGA
AGGCAAGCGAATGCGATTGTCCCAAGACACTGAGGAGGTGGCTACCTTCT
ACGGTCGCATGTTGGATCACGACTACACTACCAAAGAAGTGTTCAATCGA
AACTACATGAAAGATTGGAGGAAGGTTATGAACGAAAAGGAGAAGGAGAT
CATTCGAGACATCAGCAAATGTGATTTCAAGGAGATCGGCGTGCATTTCA
AGAAAGTCTCGGAAGAGCGAAAGGGTCGGTCCAAGGATGATAGAAAGGCC
GAGAAAGAGCGTAATGAGGCTATTCAGAAGGAATACGGATTCTGTACCAT
TGACGGACACGTGGAAAAAATTGGTAACTTCAGAATTGAGCCTCCGAGCT
TGTTCCGAGGTCGTGGGGAGCATCCCAAGCAAGGGATGTTGAAGAAACGT
GTCTCGCCAGAGGACGTGATCATTAATTGCTCCAAAAATTCGGACATCCC
AAAACCTCCCGAGGGTCGCAAATGGAAAAAGGTCCAGCATGATAATACGG
TAAGCCTAAAATTATCGATGGCTTGTTAGGAAGGAAATTGTTTTTCGCGT
TCGCCAATGTACTGAAAATTCGTTGTGTTGGGCGATTGGAGCAAGAACTC
GGAATGATTGCCCTGCTACCTCATGTTGTAAGAGGGCTATTGGATATCGT
ACATTGTCAGAATACATGGCCACGATTGTTCCACCGTTTTAGAATATATT
TGACCAGAGCCATTCACGGTACTTGCCAAGGTTGAGTTACTATCTGCAAT
GCCATGAACCATGTCCTCGCAAACAAATTTGGAGAAAGACCTAACCGTTG
GGACGTAAATGCTCACGTTTTGCAGATTCCCCCACTTGCATTTGACCAAT
ACGAGTCGGCGTTGTCAAAACTCGTTAGATTGTGCGATGTGTTTGGGAAC
CATACGAAAGGAAACGTTTGTTGTGACATAATTCCCTATCCTTTCTCCCT
TAGGTGACCTGGTTGGCGTGCTGGACAGAAAACATTCAAAACCAAATCAA
GTACGTCATGCTAAATCCCTCGTCCAAGCTCAAGGGCGAGAAGGACATGG
CTAAATATGAAAAAGCTAGAGAACTGAAAAAGCTTATTCACAAGATTCGC
GACGATTACACAGCTGATTTCAAGTCCAAAGAGATGCGCGTCCGACAACG
GTCAGTGGCTCTATACTTCATTGACAAATTGGCGTTGAGAGCGGGCAACG
AGAAAGACGAAGATCAAGCCGATACCGTGGGCTGTTGCTCGCTCAGAGTT
GAGCACATCACGCTTCATCCCGAGAAAGATGGTAAGAATTATAACGATGC
ACGATATTCTAGGGACAATTATAATGCAAATCGGCATACAAGTCGTGTAT
GTTAGGCCCAGAAAGTGCTCGTGCTCTAAAAGGGTTCAGATTATGCTGCA
TTTTGTTGGTGCATTGTGAAAATACCCTACGTAAATACTCGAATGATCTC
TTCGAGACTGGCAATCGTGTTTTGCATTCGATAGTCAGTCAATCTGAGGT
CCACGGTCCATCCTTCAGCCTCATCCCCTTCGATCTCTTCCTATGTATAT
CTTGCTCATTGCCCAGCAATGTCCCCAACACATTTGCTATGCCATTCACC
GACGACCTCCTCCTACACTTAATCGAATTGGGCGAAAATAAGATATAGAT
CAGAAGCGATCACCATAGACTTTTGAAGTACCCATCTCTCACTCCCTGCC
CTCTTTGAAAATGTGATACCGGTACAATGTCCGACTTTAATCTACGAACG
GAGCGGCGTTCCTTCCATTTCCCGTTCTCAAATCATATGAATCTTCTTTT
TGTAGTAACGCTGGTAGAGACGCTACGATCTGTATTGGCTGGAAATATGT
GCATGCGGACAATACGTACTTTTAGATTAGACCTATCAGCTCGGACCTGT
CCTGGCAATACAATGCGATATCCCTGAAGCTCTCTTTCATCCGTATCGAG
CTACAAGATGAAGTTTTTCTCACGCTTCTCCTTCTCCTTGGACCCCAAGG
ATAGCTTGTGCACGACGCCATTCTGCTTATGGCGAGAGTAGAGTTGATGT
TGAAAGTTTTGGGTACCTGCTTCAAGGAGTATATCTTGCCGGAAAGCGTA
ACCTGAAGGGTGTGCAATGCTGTTTTTTCGAATATTCCTCGTATTTGACT
TGCTTTCAAAAAGTGTCTCTGGTTCTTATTTTGGTCCCAGATCTGTCACA
ATCTTCAAGTTTTTCCGTTCTTTCCCTTGAATGAAGAATTTCCAGTCAAC
CAAGAGGGAGACACACACAGGCCTTTGGAAAAGGCCTCAACCAGGGCTCT
TAATTCGCTCTCTAGTGCTCCTGTTAGTGCAATGAGCCCTTAAATGTCTG
TCCAAAGTGAGAACCCTGCGTTGGTGTTAGCTTGAAAATCCGTTTCCATT
TCCGATGATTTGATGATTTCCTGCTGCAATCCAGCCGTCGAACGTCTTCG
AATGTTACAAAACATCGCTCAGTGGTCCTCGAAAATTATAATCCGTCCTT
GATCGGAGCTTACCCAAGACGAAGAAGGAGCAGCCCACTTATCGCCCATC
TTTCTTTCAGGGCAAGAATACGTGGTGGAATTTGATTTCCTCGGAAAGGA
TTCCATCCGTTACAACAACTGTGTCCCCGTTGAGAAACGCGTCTTCAAGA
ACGTTCAATTATTTATGGAGAACAAAAAGGCAGGCGACGACCTGTTCGAT
CGTCTGAACACTTCGATTCTCAATGAGTACTTGAACACGCTCATGCCTGG
GCTCACGGCCAAAGTGTTCCGTACTTACAATGCCTCGATCACTCTCCAAG
AACAGCTGAACCAACTCACCGAGGAAGATGACAATGTCCCTGCCAAGGTA
ATCAATCCTAGGGTATACTTTTCGCGTAGCTCGAGTGCGTGAGTACTTGA
AAGTCTGGAAATTGGCCATTGAAATTGAGTGGGCAGTGCATGATGCCATA
TTCACACCTGTGATGGGTCTGGTAACGAGCTCTAATGAGTGGGTCTCAAT
GAATGCCAATGCTTGGGGTGCAAACGCAAGGTGTTAAGTTATTATGTGCG
GTGTGGCGTGAATGAATCATCGACACGCAACCATCTCGAGGCAAATTATC
ACGATCAAAGCCACTATTTGCCCTCCCAGATCGTCTCAAGTATGACCCAT
TTAGATGGCTCTGGATAATTGGGGCTGTCGGAAATGGAATGAAACGTAGC
CTTTCTCGGATGGAAGAGCTCGTTGCCCGACCATCCTGCGATTTCGTTCG
AGTTGTGTTGGCTTCTAATGTGATTCTTTTGTCGTAGATGTTGTCCTACA
ACCGAGCCAATCGCGCCGTAGCTGTTCTCTGCAACCATCAACGTGCCGTT
CCCAAGACTCACGAGAAGTCCATGACCAACCTTCAGACCAAGATTGAAGG
CAAGAAGGATGCCGTGAACAAGGCTGAAAAGGAATTCAAGGCCGCCAAGA
AATCGCACAAGAATGGCGGATCCGCCACAAGCAAGATCAACATGGACAAG
AAGAAGAAGGCCTTGGAGCGACTGATGGAGCAGTTGAACAAACTGGAGAC
CCAAGCCGTGGATAAAGAGGAGAACAAGAGCATTGCCTTGGGTACCTCGA
AGCTCAACTATCTGGATCCCAGAATCTCCGTGGCTTGGTGCAAGAAATTC
GATGTTCCCATCGAAAAGGTGTACAATAAGACGCAACGCGAAAAGTTCCG
TTGGGCCATCGAAATGGCCGGCCCAGAGTACCAGTTCTAGGCGTCAGTCC
GAGACTCCAATCTCCACCTGGGGTCAGTATTTTCGTAGCGATATTGATCA
GCGCTTGAAGCCCCGACATGATGTACGATAATATGGTTGGGACAATGGGT
AGTAGTGTTATTGGGGTGTAAAAAACGCACTATGGATGGGCAATTTCCCC
TCCCTCTGTTGTGTGAGTAATCTATTTTCTCGTAATTTACACCCCCGATC
CTGATGAAATTGTTGAATTAAAGATGATACGTGCACCTCAGTCCGCATCC
ATTGTAAATCTCCCCAGGAGTCGCCGAGATCATGTCGCATCATTTTGGGT
TGGCACTTGGAACTGCCATTTGTGGCTCTGGTGAGATGCTTATGAAAGAA
GCACGTGACGCATCTCCACCAGTGGCGAGATGGAGTGGTGGAC

Synonyms

The feature 'topoisomerase 1b' has the following synonyms


Synonym
Tk04567

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