collagen alpha-1 chain-like, maker-scaffold476_size161517-snap-gene-0.39 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000004352 (supercontig:LSalAtl2s:LSalAtl2s229:218536:238930:1 gene:EMLSAG00000004352 transcript:EMLSAT00000004352 description:"maker-LSalAtl2s229-augustus-gene-2.24") HSP 1 Score: 123.25 bits (308), Expect = 6.829e-29 Identity = 106/238 (44.54%), Postives = 123/238 (51.68%), Query Frame = 0
Query: 79 GALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
G G G +G GSPGP GP G G G PG+ G+ G G+ G RGP G PGS G G G G++G GP G G+PG G G GP G G G+ G G PG G +G G G G G G PG G+ G SGS+G G G GK GQ G G+AG+PGP G G G G G G G G G+ G+ G G DG G NGP G+PG G GL G+PG G G
Sbjct: 1382 GPAGPKGQSGDRGSPGPLGPKGKHGDIGRPGAXGLQGLRGAPGRRGPIGRPGSPGKRGDPGADGKNGDIGPQGLQGLPGPPGNMGDKGPRGEPGQEGNPGMHGPPGPRGDAGKDGLEGPQGPIGYAGSPGERGSPGPSGSRGFQGIPGEPGKPGQPGKDGEAGLPGPSGMMGDQGKQGARGFPGERGSLGPPGPPGVRGETGGTGSDGPPGINGPKGSPGRKGPPGLVGLPGKRGISG 1619 HSP 2 Score: 121.324 bits (303), Expect = 3.004e-28 Identity = 114/262 (43.51%), Postives = 132/262 (50.38%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNG 307
GP GP G +G G PG G G G+ G PGA G G G PG GP G PG PG+ G PG+ G G G G +G G PG+ G G G GQ G G +G G G +G +G GP GP G +GS G G+PG G G G PG+ G G PG G G G SG G G G G G+ GS G G PG +G TG GS GP G G G + G GL G PG+ G G G G G+PG PG +G G
Sbjct: 1382 GPAGPKGQSGDRGSPGPLGPKGKHGDIG---RPGAXGLQGLRGAPGRRGPIGRPGSPGKRGDPGADGKNGDIGPQGLQGLPGPPGNMGDKGPRGEPGQEGNPGMHGPPGPRGDAGKDGLEGPQGPIGYAGSPGERGSPGPSGSRGFQGIPGEPGKPGQPGKDGEAGLPGPSGMMGDQGKQGARGFPGERGSLGPPGPPGVRGETGGTGSDGPPGINGPKGSPGRKGPPGLVGLPGKRGISGPAGVKGERGSPGKPGPEGPQG 1640 HSP 3 Score: 119.783 bits (299), Expect = 7.848e-28 Identity = 128/329 (38.91%), Postives = 149/329 (45.29%), Query Frame = 0
Query: 45 PGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGS------------AGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMG------------ASGSQGQNGPDGHDGKA---------GQDGSAGQAGVPGPQ------------------------GATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
PGPRG AG +G EG G G GS G G +PG G+ G G+PG PG PG PG G+AG PG G+ G G G RG G GS GG+G GP G +G G GR G PG G G G +GPAG G G+PG PG GP G G G G G G PG G+ G A+G G+ GP G G A G GS G G PG + GA G G GP G +G G + G GL G+PGR G G G +G G+ G+ GA+G G PG PG PG
Sbjct: 1486 PGPRGDAGKDGLEGPQGPIGYAGSPGERG---SPGPSGSRGFQGIPGEPGKPGQPGKDGEAGLPGPSGMMGDQGKQGARGFPGERGSLGPPGPPGVRGETGGTGSDGPPGINGPKGSPGRKGPPGLVGLPGKRGISGPAGVKGERGSPGKPGPEGPQGKIGDRGPQGTIGPIGRPGEVGSPGDHGPPGPAGEPGATGMMGERGPSGPQGLAGFPGPPGIPGPSGSKGSRGFPGGKGLQGNPGPAGGPGEPGPPGLTGLMGAKGSRGESGPRGESGMMGPPGRPGQAGLNGEPGRQGTSGPPGLHGIKGSSGSRGAEGKRGNPGAPGMPG 1811 HSP 4 Score: 97.0561 bits (240), Expect = 8.478e-21 Identity = 130/373 (34.85%), Postives = 155/373 (41.55%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSS---------------------------------GPNGPVGPAGPAGTSGSVGTPGNPGSGGP------------------------------------------SGGFGAP------GQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGD---DGGKGPNGPPGTPGTP---------GAQGLNGVPGFPGFPGN 317
P P+G GP GP G G EG PG G+ G DG GPPG PG++G G G PG+PG G GS G G+ G G RG SG PG G SG GP G+ G+ NG G PGS G +GP G +G G G +G G PG GP SG G+P G+ G G PG G G GA G +G G G GK G G+ G+ G GPQG G+PG PG +G G G+ Q G G+ G PG GD DG +GP GP G G+P G++G G+PG PG PG
Sbjct: 1176 PMGPSGPMGPAGPRGERGREGPPGAPGLRGIDGITGPPGEPGSIGKSGPPGF---------PGIPGAKGDMGSVGPKGSPGLQGPRGESGKPGGPGQSGKMGPPGKDGV---NGEKGSPGSPGAHGPPGFPGPRGKPGLNGSPGPPGPKGLSGSPGSDGPKGESGMKGEMGQMGPRGLPGPTGPAGRRGSRGIRGPSGPPGPLGEPGPPGGRGLPGSDGPAGPKGQSGDRGSPGPLGPKGKHGDIGRPGAXGLQGLRGAPGRRGPIGRPGSPGKRGDPGADGKNGDIGPQGLQGLPGPPGNMGDKGPRGEPGQEGNPGMHGPPGPRGDAGKDGLEGPQGPIGYAGSPGERGSPGPSGSRGFQGIPGEPGKPGQ 1536 HSP 5 Score: 96.6709 bits (239), Expect = 1.068e-20 Identity = 95/225 (42.22%), Postives = 113/225 (50.22%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAG 262
P G PGP G G G GEPGQ G PG G PG G G +G+ G GP G G PG+ G+PG G G G G G G PG G +GL GP G G G G G PG G GP GP G G +G G+ G PG GP G+PG+ G G+ G+PG G G +G +G+ G GK G +G G+ G GPQG G G PG +G+ G
Sbjct: 1452 PQGLQGLPGPPGNMGDKGPRGEPGQEGNPGMHG------PPGPRGDAGKDGLEGPQGPIGYAGSPGERGSPGPSGSRGFQGIPGEPGKPGQPGKDGEAGLPGPSGMMGDQGKQGARGFPGERGSLGPPGPPGVRGETGGTGSDGPPGINGPK---GSPGRKGPPGLVGLPGKRGISGPAGVKGER---GSPGKPGPEGPQGKIGDRGPQGTIGPIGRPGEVGSPG 1664 HSP 6 Score: 96.6709 bits (239), Expect = 1.077e-20 Identity = 118/334 (35.33%), Postives = 136/334 (40.72%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGP------------PGPPGL---------------PGQAGTPGSHGVAGTAGSFGTR------------------------------------------GPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPG 310
GP+G G+ G GE G+ G PG G GPPG G NG GSPG G PGL PG G G G+ G G G R GP+G G +G G GP+G G G GR G G G G G GP G GS G G+PG+ G +G G G+ G+PG PG G G G GQ G G G G G AG+ G+ GPQG G GSPG G+ G +G GI G PG+PG+ G DG G GP G G G QG G PG
Sbjct: 1241 GPKGSPGLQGPRGESGKPGGPGQSGKMGPPGKDG------VNGEKGSPGSPGAHGPPGFPGPRGKPGLNGSPGPPGPKGLSGSPGSDGPKGESGMKGEMGQMGPRGLPGPTGPAGRRGSRGIRGPSGPPGPLGEPGPPGGRGLPGSDGPAGPKGQSGDRGSPGPLGPKGKHGDIGRPGAXGLQGLRGAPGRRGPIGRPGSPGKRGDPGADGKNGDIGP---QGLQGLPGPPGNMGDKGPRGEPGQEGNPGMHGPPGPRGDAGKDGLEGPQGPIGYAGSPGERGSPGPSGSRGFQGIPGEPGKPGQPGKDGEAGLPGPSGMMGDQGKQGARGFPG 1565 HSP 7 Score: 92.4337 bits (228), Expect = 2.343e-19 Identity = 129/410 (31.46%), Postives = 150/410 (36.59%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGT------------------------------------PGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPN---------------GPVGPAGPAGTS------------------------------------------------GSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGS------------------------PGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTP------------GTPGAQGLNGVPGFPGFPGN 317
G PGP G G G GEPG+ G PG DG G PG G +G PG NG GSPG GPPGL G PG G++G AG G RG G PG G G G G G GP GR G GS G + G GP+GP G + G+ G+ G G G SG G PG+ G AG+ G PG GT G G G G G G G+ G+ G G+PGP+G G G+ PGP G G G G G G+PG+ G G +G GPPG G PGA G+ G PG G PG+
Sbjct: 1514 GSPGPSGSRGFQGIPGEPGKPGQPGKDGEAGLPGPSGMMGDQGKQGARGFPGERGSLGPPGPPGVRGETGGTGSDGPPGINGPKGSPGRKGPPGL---VGLPGKRGISGPAGVKGERGSPGKPGPEGPQGKIGDRGPQGTIGPIGRPGEVGSPGDHGPPGPAGEPGATGMMGERGPSGPQGLAGFPGPPGIPGPSGSKGSRGFPGGKGLQGNPGPAGGPGEPGPPGLTGLMGAKGSRGESGPRGESGMMGPPGRPGQAGLNGEPGRQGTSGPPGLHGIKGSSGSRGAEGKRGNPGAPGMPGPEGQKGGVGADGPPGPSGPPGPGGPPGDRGSPGLPGPTGPIGARGPQGSQGERGESGKPGKEGPIGPQGLLGPPGPSGERGERGEEGPMGKPGAPGIGGRPGDKGPPGS 1920 HSP 8 Score: 89.3521 bits (220), Expect = 2.142e-18 Identity = 122/361 (33.80%), Postives = 146/361 (40.44%), Query Frame = 0
Query: 49 GPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGA---LGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTR------GPSGTPGSAGGS---------------GLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPG---------------------------------NPGSGGPSGGFGAPGQAGVAGVPGVPG------------------------------------TGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
GP+G G G PG G+PG G+ G PG GA +G+ G G G+PGP GP G G AG G G G G+ G R GP G PGS G S G GP G GL GP G +G PG G +G +GP G G +G G+PG +PGS GP G G G+ G G G+PG + G G G G G G G G+ G G+ G G QG G PG GP+G G+ G+ G PG G+NGD G +G G PG PG G +G G PG G PG
Sbjct: 1127 GPSGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGNVGSSGEKGEDGAPGPMGPSGPMGPAGPRGERGREGPPGAPGLRGIDGITGPPGEPGSIGKSGPPGFPGIPGAKGDMGSVGPKGSPGLQGPRGESGKPGGPGQSGKMGPPGKDGVNGEKGSPGSPGAHGPPGFPGPRGKPGLNGSPGPPGPKGLSGSPGSDGPKGESGMKGEMGQMGPRGLPGPTGPAGRRGSRGIRGPSGPPGPLGEPGPPGGRGLPGSDGPAGPKGQSGDRGSPGPLGPKGKHGDIGRPGAXGLQGLRGAPGRRGPIGRPGSPGKR------GDPGADGKNGDIGPQGLQGLPGPPGNMGDKGPRGEPGQEGNPG 1481 HSP 9 Score: 83.5741 bits (205), Expect = 1.343e-16 Identity = 110/335 (32.84%), Postives = 125/335 (37.31%), Query Frame = 0
Query: 86 TNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGT------------------SGSVGTPGNPGSGGP---SGGFGAPGQAGVAGVPGVPGTGGTMGASGSQ---------------------------------GQNGPDGHDGKAGQDGSAGQAGVP------------------------------------------GPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLN------GVPGFPGFPGNL 318
G+PG PG PGP G G PG G G GS G +G G PG G SG GP G G G G G PG G +G GP G G+ GSVG G+PG GP SG G PGQ+G G PG G G G+ GS G +GP G G G+ G G G+P GP+G +G GSPGPLG G G + G GL G G G G G G PG G PGA G N G+ G PG PGN+
Sbjct: 1134 KRGLPGMPGLPGPKG---HRGFPGLDGAKGNVGSSGEKGEDGAPGPMGPSGPMGPAGPRGERGREGPPGAPGLRGIDGITGPPGEPGSIGKSGPPGFPGIPGAKGDMGSVGPKGSPGLQGPRGESGKPGGPGQSGKMGPPGKDGVNGEKGSPGSPGAHGPPGFPGPRGKPGLNGSPGPPGPKGLSGSPGSDGPKGESGMKGEMGQMGPRGLPGPTGPAGRRGSRGIRGPSGPPGPLGEPGPPGGRGLPGSDGPAGPKGQSGDRGSPGPLGPKGKHGDIGRPGAXGLQGLRGAPGRRGPIGRPGSPGKRGDPGADGKNGDIGPQGLQGLPGPPGNM 1465 HSP 10 Score: 73.9442 bits (180), Expect = 1.059e-13 Identity = 114/320 (35.62%), Postives = 136/320 (42.50%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTN------------GVPGSPGPPGPPGL---------PGQAGTPGSHGVAGTAG---------------------SFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGV------------------AGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPG 298
S PAG G RG G G EG G+ G G G GP G PG +G+PG + G+ G GP GP GL PG +G+ GS G G G G +G G G G SG+ GP G+ G AG NG G G+SGP G G G +G+ G+ G GNPG+ G G G G G G PG+PG G +GA G QG G G GK G++G G G+ GP PGP G G G+ G G PG GR GD GPPG+ G
Sbjct: 1618 SGPAGVKGERGSPGKPGPEGPQGKIGDRGPQGTIGPIGRPGEVGSPGDHGPPGPAGEPGATGMMGERGPSGPQGLAGFPGPPGIPGPSGSKGSRGFPGGKGLQGNPGPAGGPGEPGPPGLTGLMGAKGSRGESGPRGESGMMGPPGRPGQAGLNGEPGRQGTSGPPGLHGIKGSSGSRGAEGKRGNPGAPGMPGPEGQKGGVGADGPPGPSGPPGPGGPPGDRGSPGLPGPTGPIGARGPQGSQGERGESGKPGKEGPIGPQGLLGP---------PGPSGERGERGEEGPMGKPGAPGIGGRPGD------KGPPGSAG 1922 HSP 11 Score: 68.5514 bits (166), Expect = 6.019e-12 Identity = 108/280 (38.57%), Postives = 125/280 (44.64%), Query Frame = 0
Query: 53 VNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSG---GPSGGFGAPGQAGV---------AGVPGVPGTGGTMGASGSQGQNG------------------PDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPL------GTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGT 296
+ G +G G+ G G G GPPG PG G G G G+ GPPG G+ G +G+ G+ G G G+ G GP G G G G GP G G GP G G PG GP GP+G GP G+ G G G PG GP G G PG +G G PG PG GG G G G G P G G+ G+ GS G AGV GP G G G PG G +G G G+ GL G G +G G KGP G GT
Sbjct: 1740 LMGAKGSRGESGPRGESGMMGPPGRPGQAGLNGEPGRQGTSGPPGLHGIKGSSGSRGAEGKRGNPGAPGMPGPEGQKGGVGADGPPGPSGPPGPGGPPGDRGSPGLPGPTGPIGARGPQGSQGERGESGKPGKEGPIGPQGLLGPPGPSGERGERGEEGPMGKPGAPGIGGRPGDKGPPGSAGLMGSPGGPGIPGPPGKTGPSGPTGERGERGSIGPAGVIGPPGMIGKTGPPGLQGPPGLDGGSGAKGSKGHRGLIGLQGLTGPSGPPGDKGPRGESGT 2019 HSP 12 Score: 63.929 bits (154), Expect = 1.397e-10 Identity = 84/205 (40.98%), Postives = 98/205 (47.80%), Query Frame = 0
Query: 82 GTPGTNGVPGSPGPPGPP---GLPGQAGTPGSHGVAGTAGSFGTRGPSGTP------GSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPG 277
G PG G G PGP G P G G+ G G G G +G G RG G P G G GL G G G +G G +G PG GP+GP+GPAGP G G G P GAPG G+ G+ G PG G++G SG G G G G G G G G+ GP+G +G PG PG G G G+ NG G PG
Sbjct: 1091 GDPGIRGSAGPPGPRGLPGLTGKEGEGGQDGEPGPMGPSGPPGKRGLPGMPGLPGPKGHRGFPGLDGAKGNVGSSGEKGEDGAPGPMGPSGPMGPAGPRGERGREGPP------------GAPGLRGIDGITGPPGEPGSIGKSGPPGFPGIPGAKGDMGSVGPKGSPGLQGPRGESGKPGGPGQSGKMGPPGKDGVNGEKGSPG 1283 HSP 13 Score: 61.6178 bits (148), Expect = 8.105e-10 Identity = 102/307 (33.22%), Postives = 123/307 (40.07%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGI---PGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHG------------------------VAGTAGSFGTRGPSGTPGSAGGSGL---SGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGG------------------------PSGGFGAPGQAGVAGVPGVPGT------------------------GGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNG 271
G GPRG +G+ G G PGQ G+ PG G GPPG G G+ G+ G G G PG PG+PG G G G + G G G RGP G+ G G SG GP+G GL GP G +G G G GP+G G G G G G PGS G G G+ G AGV G PG+ G G +G G G +GP G G G+ G+ G+ G PGP+G G+ G+ GP G G G G
Sbjct: 1748 GESGPRGESGMMGPPGRPGQAGLNGEPGRQGTSGPPGLHGIKGSSGSRGAEGKRGNPGAPGMPGPEGQKGGVGADGPPGPSGPPGPGGPPGDRGSPGLPGPTGPIGARGPQGSQGERGESGKPGKEGPIGPQGLLGPPGPSGERGERGEEGPMGKPGAPGIGGRPGDKGPPGSAGLMGSPGGPGIPGPPGKTGPSGPTGERGERGSIGPAGVIGPPGMIGKTGPPGLQGPPGLDGGSGAKGSKGHRGLIGLQGLTGPSGPPGDKGPRGESGTNGKPGEPGPRGPPGLDGAIGPPGLLGAPGPRGSQG 2054 HSP 14 Score: 60.077 bits (144), Expect = 2.303e-9 Identity = 115/297 (38.72%), Postives = 132/297 (44.44%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSD---------------GNFGPPG------------TPGALGTPGTNGVPGSPG------------PPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPG 295
P P G G RGP G G G PG+ G PG G GP G PG G+ G+ G PG G PGPPGL G G GS G +G G G GP G PG A GL+G G+ G +GP G +GI GSSG G G G+ G PG PG G GG GA G G +G PG G G G+ G G GP G G G G G++G PG +G G G GP G +G G+ + G G PG PG G G KGP G G
Sbjct: 1635 PEGPQGKIGDRGPQGTIGPIGRPGEVGSPGDHGPPGPAGEPGATGMMGERGPSGPQGLAGFPGPPGIPGPSGSKGSRGFPGGKGLQGNPGPAGGPGEPGPPGLTGLMGAKGSRGESGPRGESGMMGPPGRPGQA---GLNGEPGRQGTSGPPGLHGIKGSSGSR------GAEGKRGNPGAPGMPGPEGQKGGVGADGPPGPSGPPGPGGPPGDRGSPGLPGPTGPIGARGPQGSQGERGESGKPGKEGPIGPQGLLGPPGPSGERGERGEEGPMGKPGAPGIGGRPGDKGPPGSAG 1922 HSP 15 Score: 52.373 bits (124), Expect = 4.873e-7 Identity = 74/196 (37.76%), Postives = 84/196 (42.86%), Query Frame = 0
Query: 146 LAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGT------------------------PGTPGAQGLNGVPGFPGFPGN 317
GP G G PG G GP GP G G +G G G G GP G G PG+ G+ G+PG+PG P GH G G DG+ G G G +G G PG GP G G AG + G G PG PG G DG GP G PG+ G+PG QG G G PG PG
Sbjct: 1083 FMGPQGEGGDPGIRGSAGPPGPRGLPGLTGKEGEGGQDGEPGPMGPSGPPGKRGLPGMPGLPG---------------PKGHRGFPGLDGAKGNVGSSGEKGEDGAPGPMGPSGPMGPAGPRGERGREGPPGAPGLRGIDGITGPPGEPGSIGKSGPPGFPGIPGAKGDMGSVGPKGSPGLQGPRGESGKPGGPGQ 1263
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000002798 (supercontig:LSalAtl2s:LSalAtl2s16161:6:765:1 gene:EMLSAG00000002798 transcript:EMLSAT00000002798 description:"augustus_masked-LSalAtl2s16161-processed-gene-0.0") HSP 1 Score: 110.538 bits (275), Expect = 6.461e-28 Identity = 66/171 (38.60%), Postives = 92/171 (53.80%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNV-PCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCP-DADPNSESRTCFTD--CPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGA 491
VDG WS W W +C + CGNG ++R R CN P P+HGG SC G+ V+ Q+CNV CPI+ + W++W+SC T TCG G R R C FGG C ++ + C+ C +DG + + + C + CG G + + R C+NP P+F G C GA
Sbjct: 13 VDGKWSSWQSWGQC---SASCGNGRRQRARECNSPSPAHGGLSCFGNSVDXQVCNVRECPIDASWSLWTQWTSC---TKTCGEGRRERQRNCDGAL--FGGRPCTGNSTVERDVIPCWIQVVCSLDGHWSSWAQWSTC---STTCGAGNRQRRRDCNNPAPKFGGRRCAGA 172 HSP 2 Score: 65.0846 bits (157), Expect = 2.709e-12 Identity = 40/112 (35.71%), Postives = 54/112 (48.21%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQ-----MCNVPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDAD 431
+D WS W W+ C CG G +ER R C+ GG C G+ + V C ++G + W++WS+C + TCG G R R C NP+P FGG C AD
Sbjct: 70 IDASWSLWTQWTSC---TKTCGEGRRERQRNCDGAL--FGGRPCTGNSTVERDVIPCWIQVVCSLDGHWSSWAQWSTC---STTCGAGNRQRRRDCNNPAPKFGGRRCAGAD 173
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000010726 (supercontig:LSalAtl2s:LSalAtl2s70:521491:527469:-1 gene:EMLSAG00000010726 transcript:EMLSAT00000010726 description:"augustus_masked-LSalAtl2s70-processed-gene-6.0") HSP 1 Score: 110.153 bits (274), Expect = 3.351e-25 Identity = 118/293 (40.27%), Postives = 132/293 (45.05%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGL---SGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSG---------------GPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIG-GLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
G GPRG G G++G PG G G G GPPG PG G PGT+G PG G G G PG G+ GS G G G G RG +G PGS G G+ GP+G+ G G G G+ GS G G +GP G G G G+PG G G G G G GV G PG PG G G G +G+ G G DG G +GS G G PG G G G G G G GQPG G G KG G PG G G QG G G PG G
Sbjct: 232 GAKGPRGHRGEKGFKGPPGARGDRGFPGVSGPPGLPGEHGIPGTDGRPGLKGEKGLIGSPGITGSMGSQGRHGLNGMKGDRGDAGLPGSPGPHGIPGHEGPLGRKGEPGIPGPIGMEGSDGEKGEMGPVGKPGHYGHQGSPGLKGIKGTIGPPGNQGPPGLIGKKGIVGLTGPKGVQGRPGYPGYNGDHGPQGLKGETGMPGEDGPVGSEGSIGPRGPPGRIGRRGSSGRRVSAYILYFKGLIVSQNTGPGERGQPGYPGVLGPKGDAGEPGIEGPFGXQGPTGPMGQPGVEG 524 HSP 2 Score: 97.4413 bits (241), Expect = 3.575e-21 Identity = 101/265 (38.11%), Postives = 120/265 (45.28%), Query Frame = 0
Query: 54 NGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
G GE G+ G G+ G G G G G PG G G PG GPPGLPG+ G PG+ G G G +G G+PG G G G G +G+ G G G+PGS GP+G G GP G G PG+PG G G+ G +G+ GP G G G GS G G+ G G G G PG +G G G G+ G PG PG NGD G +G G G PG G G G G G PG +
Sbjct: 219 KGAPGERGEKGEIGAKGPRGHRGEKGFKGPPGARGDRGFPGVSGPPGLPGEHGIPGTDGRPGLKGE---KGLIGSPGITGSMGSQGRHGLNGMKGDRGDAGLPGSPGPHGIPGHEGPLGRKGE---------------------------PGIPGPIGMEGSDGEKGEMGPVGKPGHYGHQGSPGLKGIKGTIGPPGNQGPPGLIGKKGIVGLTGPKGVQGRPGYPGYNGDHGPQGLKGETGMPGEDGPVGSEGSIGPRGPPGRI 453 HSP 3 Score: 97.0561 bits (240), Expect = 4.640e-21 Identity = 121/351 (34.47%), Postives = 145/351 (41.31%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFG---PPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGT---------------------AGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSG----------------------SVGTPGNPGSGGPSGG---------FGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKA---------------------GQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G G +G G G G PG HGIPG +G G PG PG +G G++G G GP G PG G G+PG G+ GT G G +G G PG G G G G++G+ G +G G GS GP GP G G G+SG G PG PG GP G FG G G G PGV G G+ G G G GP G +G+ G G GQ GVPGP PGP G G G+ +G G PG+ G+ GD G G G G PG PG +G +G G+PG G+
Sbjct: 304 GLNGMKGDRGDAGLPGSPGPHGIPGHEGPLGRKGEPGIPGPIGMEGSDGEKGEMGPVGKPGHYGHQGSPGLKGIKGTIGPPGNQGPPGLIGKKGIVGLTGPKGVQGRPGYPGYNGDHGPQGLKGETGMPGEDGPVGSEGSIGPRGPPGRIGRRGSSGRRVSAYILYFKGLIVSQNTGPGERGQPGYPGVLGPKGDAGEPGIEGPFGXQGPTGPMGQPGVEGPIGSTGPVGDSGNPGPPGLEGRQGLPGLPGPRGLRGRRGKRGPDGDSGEIGQRGVPGPMS------DPGPRGPKGDRGRPGLDG--GKPGEFGKKGDSGLPGVPGEMGIPGAPGNKGSDGPRGWPGEKGS 646 HSP 4 Score: 95.9005 bits (237), Expect = 1.006e-20 Identity = 129/382 (33.77%), Postives = 148/382 (38.74%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNG---------------------VPGSPGP------PGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSG---------------------LSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAG------------PAGTSGSVGTPGNPGSGGPSGGFGA-------------------PGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTA---------------------GTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTP----GTPGAQGLNGVPGFPGFPGNL 318
P G G RG GV+G G PG+HGIPG+DG G G G +G+PG G +PGSPGP GP G G+ G PG G+ G+ G G GP G PG G G L G G GL GP G G PG G NG GP G P G+ GS+G G PG G G G PG+ G G PGV G G G G +G G G G GQ G G G GP G +G PG PG G G +G+ Q G+ PG D G +GP G G P G PG G G G PG PG +
Sbjct: 248 PPGARGDRGFPGVSGPPGLPGEHGIPGTDGRPGLKGEKGLIGSPGITGSMGSQGRHGLNGMKGDRGDAGLPGSPGPHGIPGHEGPLGRKGEPGIPGPIGMEGSDGEKGEMGPVGKPGHYGHQGSPGLKGIKGTIGPPGNQGPPGLIGKKGIVGLTGPKGVQGRPGYPGYNGDHGPQGLKGETGMPGEDGPVGSEGSIGPRGPPGRIGRRGSSGRRVSAYILYFKGLIVSQNTGPGERGQPGYPGVLGPKGDAGEPGIEGPFGXQGPTGPMGQPGVEGPIGSTGPVGDSGNPGPPGLEGRQGLPGLPGPRGLRGRRGKRGPDGDSGEIGQRGV------PGPMSDPGPRGPKGDRGRPGLDGGKPGEFGKKGDSGLPGVPGEM 623 HSP 5 Score: 80.1073 bits (196), Expect = 8.368e-16 Identity = 88/240 (36.67%), Postives = 108/240 (45.00%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGV-------------------PGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGP---------------------------NGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGS 236
GY G GP G+ G G PG+ G GS+G+ GP G PG +G G++G PG G PG PG+ G G G G+ G G G GP G PG G G +GPVG SG GP +G +G G G GP+ GP G G G PG GG G FG + G +G+PGVPG G GA G++G +GP G G+ G GS
Sbjct: 415 GYNGDHGPQGLKGETGMPGEDGPVGSEGSIGPRGPPGRIGRRGSSGRRVSAYILYFKGLIVSQNTGPGERGQPGYPGVLGPKGDAGEPGIEGPFGXQGPTGPMGQPGVEGPIGSTGPVGDSGNPGPPGLEGRQGLPGLPGPRGLRGRRGKRGPDGDSGEIGQRGVPGPMSDPGPRGPKGDRGRPGL--DGGKPGEFG---KKGDSGLPGVPGEMGIPGAPGNKGSDGPRGWPGEKGSPGS 649 HSP 6 Score: 79.7221 bits (195), Expect = 1.132e-15 Identity = 80/205 (39.02%), Postives = 95/205 (46.34%), Query Frame = 0
Query: 131 SAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPG---PQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPN---------------GPPGTPGTPGAQGLNGVPGFPGFPGN 317
+ G G G G+ G GP G G G GP G G G G SG PG PG G G G PG G G+ G PG G+MG+ G G NG G G AG GS G G+PG P G G PG PGP+G G+ G+ + G G PG G G G KG G G G G +G+ G PG+PG+ G+
Sbjct: 218 NKGAPGERGEKGEIGAKGPRGHRGEKGFKGPPGARGDRGFPGVSG---PPGLPGEHGIPGTDGRPGLKGEKGLIGSPGITGSMGSQGRHGLNGMKGDRGDAGLPGSPGPHGIPGHEGPLGRKGEPGIPGPIGMEGSDGEKGEMGPVGKPGHYGHQGSPGLKGIKGTIGPPGNQGPPGLIGKKGIVGLTGPKGVQGRPGYPGYNGD 419
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000007459 (supercontig:LSalAtl2s:LSalAtl2s427:195023:201893:-1 gene:EMLSAG00000007459 transcript:EMLSAT00000007459 description:"augustus_masked-LSalAtl2s427-processed-gene-2.0") HSP 1 Score: 109.768 bits (273), Expect = 8.901e-25 Identity = 114/280 (40.71%), Postives = 132/280 (47.14%), Query Frame = 0
Query: 49 GPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPV------------GQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPG--PQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGF 314
G G+ G +GEPG G G G G G+PG G PG G PG+PG G PGLPG G G G G G G GP G PG G GLSG GQSGL+G G G+PG G NG G GP G +G G P G G G +G G PG G G G +G G G G G G++G G+ G +G G+PG PG G +G G + G GLPG GR GD G +G NG G G PG G+ G PG G
Sbjct: 1072 GQQGLKGEKGEPGLSGKDGFPGQSGQKGSPGLPGMPGQKGNPGNPGQSGLPGLPGLDGRSGQKGERGLPGLPGLEGPKGNPGFPGKPGLSGRDGASGSPGQKGYPGQSGLSGEKGDTGLPGMPGLNGAKGDMGPQGDTGLTGLP------------GLKGDRGFSGPQGKPGFPGENGREGPRGMAGIPGEKGDLGDKGNSGXPGLDGIMVKGEKGLPGLPGKQGRSGPPGLMGEKGDDGLPGLDGRQGDKGDRGFNGVKGDRGYPGPPGMRGQPGLNGM 1339 HSP 2 Score: 107.842 bits (268), Expect = 4.086e-24 Identity = 121/308 (39.29%), Postives = 138/308 (44.81%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGT------------PGTNGVPGSPGPPGPPGL---------PGQAGTPGSHGVAGTAGSF---------GTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
S G+PG G G G G PGQ G PG+ G G PG PG G PG G G+PG PG PGL PGQ G PG G++G G G +G G G G +GL G G G +GP G+ G PG +G GP G AG G G +G GN G G G G G+PG+PG G G G G+ G DG G G+ G G G G +G G PG PG G G G G GLPG G GD GPPG PG G +G G PG G PG
Sbjct: 1086 SGKDGFPGQSGQKGSPGLPGMPGQKGNPGNPGQSGLPGLPGLDGRSGQKGERGLPGLPGLEGPKGNPGFPGKPGLSGRDGASGSPGQKGYPGQSGLSGEKGDTGLPGMPGLNGAKGDMGPQGDTGLTGLPGLKGDRGFSGPQGKPGFPGENGREGPRGMAGIPGEKGDLGDKGNSGXPGLDGIM----VKGEKGLPGLPGKQGRSGPPGLMGEKGDDGLPGLDGRQGDKGDRGFNGVKGDRGYPGPPGMRGQPGLNGMVGAKGDYGLPGLSGIKGD------QGPPGLPGIIGEKGNTGFPGKDGVPG 1383 HSP 3 Score: 107.071 bits (266), Expect = 7.464e-24 Identity = 121/322 (37.58%), Postives = 139/322 (43.17%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAG---TPGSHGVAGTAGSFGT--------------------RGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNG------------------------PVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAA---QNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G +G AG G GE G+ G PG G G G PG G PG +G G+ GP G G PG G PG HG G G GT +G SG PG G G SGP G G G G G+PG +G G G GP G GS G PG PG G G FG G G +G+PG PG G G DG G+ G G++G +G PG G G PG+PG G G G Q+GI GLPG GD G +GP+GP G PG +G G PG PG G
Sbjct: 741 GQKGIAGAKGERGEKGERGFPGEIGQKGDRGQPGPFGNPGVSGQKGNIGPAGDRGYPGSKGDRGIPGLHGRIGDKGDKGTAGLPGVGPPGYAGAPGMKGNKGESGLPGLQGEQGRSGPAGFPGEKGDKGMEGLPGLNGIRGDKGNPGPLGPQGPPGPPGPSGIDGQKGNRGPTGRVGSPGMPGRPGMKGDKGEFGREGPKGFSGLPGKPGVPGIRGL---------DGLPGQKGDKGTSGSSGFPGKDGFPGSPGAPGLNGMKGEFGMNGLPGQDGIPGLPGM---KGDTGMRGPDGPRGLPGRIAEKGDRGQPGLPGLQGQ 1050 HSP 4 Score: 94.7449 bits (234), Expect = 4.197e-20 Identity = 128/368 (34.78%), Postives = 152/368 (41.30%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPG---------------------------------------SPGPPGPPGLPGQA------------------------------GTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIP---------GSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTG--GTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGV---PGFPGFPGNLVVLPNKVD 326
G PG G G+ G +GE G G+ G G GP G PG G G G+PG G PG PG PG G PG G GT+GS G G G PGS G GL+G G+ G+ G G++GIP G GP+GP G G G G PG PG G G G G G+ G PG+PG G G G G G +G DG G++GQ GS G G+PG +G G PG G G G G++ Q G GLPG PG +GP G PG PG PG G +G PG G+PG + K D
Sbjct: 826 VGPPGYAGAPGMKGNKGESGLPGLQGEQGRSGPAGFPGEKGDKGMEGLPGLNGIRGDKGNPGPLGPQGPPGPPGPSGIDGQKGNRGPTGRVGSPGMPGRPGMKGDKGEFGREGPKGFSGLPGKPGVPGIRGLDGLPGQKGDKGTSGSSGFPGKDGFPGSPGAPGLNGMKGEFGMNGLPGQDGIPGLPGMKGDTGMRGPDGPRGLPGRIAEKGDRGQPGLPGLQGQDGNPGFDGLTGLKGEPGLPGIGQQGLKGEKGEPGLSGKDGFPGQSGQKGSPGLPGMPGQKGNPGNPGQSGLPGLPGLDGRSGQKGERGLPGLPGL------EGPKGNPGFPGKPGLSGRDGASGSPGQKGYPGQSGLSGEKGD 1187 HSP 5 Score: 88.1965 bits (217), Expect = 4.970e-18 Identity = 125/355 (35.21%), Postives = 148/355 (41.69%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDG--NFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSG---------------T---------------------PGSAGGSGLSGPVGQSGLAGPN------GRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGN---PGSGGPSGGFGAPGQAGVAGVP---GVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVP--------------------------GSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
P+ GYPG +G G+ G G G G G+ G GPPG GA G G G G PG G G G AG PG G G G G G G PG G G+ G G+ G GP G+ G+PG G +G G G GTSGS G PG PGS G G G G+ G+ G+P G+PG G G +G +G +GP G G+ + G GQ G+PG QG G P G PG G G GQ+ Q G GLPG PG+ G+ G G +G PG PG G G G G PG PG
Sbjct: 790 PAGDRGYPGSKGDRGIPGLHGRIGDKGDKGTAGLPGVGPPGYAGAPGMKGNKGESGLPGLQGEQGRSGPAGFPGEKGDKGMEGLPGLNGIRGDKGNPGPLGPQGPPGPPGPSGIDGQKGNRGPTGRVGSPGMPGRPGMKGDKGEFGREGPKGFSGLPGKPGVPGIRGLDGLPGQKGDKGTSGSSGFPGKDGFPGSPGAPGLNGMKGEFGMNGLPGQDGIPGLPGMKGDTGMRGPDGPRGLPGRIAEKGDRGQPGLPGLQGQDGNPGFDGLTGLKGEPGLPGIGQQGLKGEKGEPGLSGKDGFPGQSGQKGSPGLPGMPGQKGNPGNPGQSGLPGLPGLDGRSGQKGERGLPGLPG 1144 HSP 6 Score: 84.3445 bits (207), Expect = 6.789e-17 Identity = 118/314 (37.58%), Postives = 138/314 (43.95%), Query Frame = 0
Query: 52 GVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHG------------VAGTAGSFGTRGPSGTPGS---AGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSG--------------GPSGGFGAPGQAGV--------------AGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPN-----GPPGTPGTPGAQGLNGVPGFPGFPGN 317
G+ G +G PG +G+ G G G PG+ GA G G +G PG PG G PG G+ GTPG+ G + G G G+ G SG PG +G G+ GP G GL GP G G PG +G G G G G G PG P G G G G G+AG G G G G GA G +G+ G G G+ GQ G GQ PGP G GV G G +G AG G G G+PG GR GD G KG GPPG G PG +G G G PG G
Sbjct: 545 GMKGQKGVPGLNGLDGPPGERGMPGSLGAKGERGDDGSPGVPGRIGDPGQSGRDGTPGTKGDKGADAIVPDYLLKGPKGDKGSMGFSGVPGPPGLSGAKGMDGPSGSPGLPGPKGEKGPPGI---DGYPGRNGRPGVMGIQGPPGKPVKGNIGPPGPLGPMGEVGDKGDVGPKGEAGRCPENLALTAGGKGIKGDKGDFGQKGIAGAKGERGEKGERGFPGEIGQKGDRGQ---PGPFGNPGVSGQKGNIGPAGDRGYPGSKGDRGIPGLHGRIGDKGDKGTAGLPGVGPPGYAGAPGMKGNKGESGLPGLQGE 852 HSP 7 Score: 84.3445 bits (207), Expect = 7.522e-17 Identity = 127/361 (35.18%), Postives = 149/361 (41.27%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLP--------------GQAGTPGSHGVAGTAGS--------------------FGTRGPSGTPGS---AGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGT---------------------------AGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGP------PGTPGTPGAQGLNGVPG---------------FPGFPGN 317
+G PGP G +G G +G G G+PG G GPPG G PG NG PG G GPPG P G+ G G G G AG FG +G +G G G G G +GQ G G G G PG SG G +GPAG G GS G G PG G G G G AG+PGV G G GA G +G G G G G+ G +G AG PG +G G+ G PG G G G + G G+PG+PG GD G G GP PG PG PG +GL+G+PG GFPG+
Sbjct: 631 SGVPGPPGLSGAKGMDGPSGSPGLPGPKGEKGPPGIDG---YPGRNGRPGVMGIQGPPGKPVKGNIGPPGPLGPMGEVGDKGDVGPKGEAGRCPENLALTAGGKGIKGDKGDFGQKGIAGAKGERGEKGERGFPGEIGQKGDRGQPGPFGNPGVSGQKGNIGPAGDRGYPGSKGDRGIPGL---HGRIGDKGDKGTAGLPGV-GPPGYAGAPGMKGNKGESGLPGLQGEQGRSGPAGFPGEKGDKGMEGLPGLNGIRGDKGNPGPLGPQGPPGPPGPSGIDGQKGNRGPTGRVGSPGMPGRPGMKGDKGEFGREGPKGFSGLPGKPGVPGIRGLDGLPGQKGDKGTSGSSGFPGKDGFPGS 984 HSP 8 Score: 82.4185 bits (202), Expect = 2.999e-16 Identity = 124/340 (36.47%), Postives = 153/340 (45.00%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGS------DGNFGPPGTPGALGTPGTNGVPGSPGPPGPPG---------LPGQAGTPGSHGVAGT------AGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGP-----------------------NGPVGPAGPAG--------TSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGS---AGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIG--------------GLPGQPGRNGDDGGKGPNGPPGTPGTPGAQ---GLNGVPG 310
G G +G G+NG +G PG+ G+PGS G+ G PG PG +G PG +G G+PG G G L G G GS G +G +G+ G GPSG+PG G G GP G G G NGR G+ G GP G VGP G AG T+G G G+ G G G GA G+ G G G PG +G G +GQ GP G+ G +GQ G+ AG G PG +G G+PG G +G G G A G+G G G PG G+ G GP G PG G G + GLNG+ G
Sbjct: 545 GMKGQKGVPGLNGLDGPPGERGMPGSLGAKGERGDDGSPGVPGRIGDPGQSGRDGTPGTKGDKGADAIVPDYLLKGPKGDKGSMGFSGVPGPPGLSGAKGMDGPSGSPGLPGPKGEKGPPGIDGYPGRNGRPGVMGIQGPPGKPVKGNIGPPGPLGPMGEVGDKGDVGPKGEAGRCPENLALTAGGKGIKGDKGDFGQKGIAGAKGERGEKGERGFPGE---IGQKGDRGQPGPFGNPGVSGQKGNIGPAGDRGYPGSKGDRGIPGLHGRIGDKGDKGTAGLPGVGPPGYAGAPGMKGNKGESGLPGLQGEQGRSGPAGFPGEKGDKGMEGLPGLNGIRG 881 HSP 9 Score: 76.2554 bits (186), Expect = 1.960e-14 Identity = 121/335 (36.12%), Postives = 143/335 (42.69%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFG-----------------TRGPSGTPGSAGGSGLSGP------VGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGV---PGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPG---------------------PLGTAG------------TAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
GYPG G +G G G PG G+ G+ G+ GP G G G PG G G GP G PG PG+ G G G+AG G G +G G PG G G SGP G GL G +GR G G G NG G G G G G PG G G G +G PG +G+ G PG+PG G G +G G++G G G+ G+ G+ G +G+PGP G G+ G G P G G G I G PG PG G G G NGPPG G PG +G G PG PG G
Sbjct: 1173 KGYPGQSGLSGEKGDTGLPGMPGLNGAKGDMGPQGDTGLTGLPGLKGDRGFSGPQGKPGFPGENGREGPRGMAGIPGEKGDLGDKGNSGXPGLDGIMVKGEKGLPGLPGKQGRSGPPGLMGEKGDDGLPGLDGRQGDKGDRGFNGVKGDRGYPGPPGMRGQPGLNGMVGAKGDYGLPGLSGIKGDQGPPGLPGIIGEKGNTGFPGKDGVPGIPGQRGEKGNPGLSGIPGPAGQRGLKGDVGLPGQFGPPGIPGPKGNTGLFGPPGLKGNPGPPGLPGIPGQEGPMGPRAIPGSPGVPGIKGSSGRPGFNGPPGPVGLPGMKGDRGFPGQPGLQGR 1507 HSP 10 Score: 73.9442 bits (180), Expect = 1.184e-13 Identity = 114/319 (35.74%), Postives = 137/319 (42.95%), Query Frame = 0
Query: 48 RGPAGVNGWEGEPGQHGIPGS----------DGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTA--GSFGTRGPSGTPGSAGGSGLSGPVGQSGLAG-----------------PNGRNGIPGSSGPNGPV---------------GPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQG---ATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLV 319
+G G +G++G PG+ G G G GPPG G GTPG +G+ GSPG G G PG G PGS G G + G G G +G PG+AG G G G+ G+ G GR+G PG G +G G G G G G G PG G G GA G+ G G PGVPG +G G G++G G G G D + GP+G + G G PGP G +G G +G GLPG KG GPPG G PG G GV G G PG V
Sbjct: 383 KGDQGRDGYDGFPGRAGGKGEAVGGPGLPGLSGPEGPPGIKGEKGTPGLSGITGSPGQIGEKGSPGDPGYPGSRGQKGLSIPGPRGKDGYNGRPGNAGLKGERGYTGERGVPGDSLEGTPGPPGPVGPIGEKGRDGQPGRPGLSGGKGDKGFKGGECQLCAPGMKGQKGVPGLNGLDGPPGERGMPGSLGAKGERGDDGSPGVPGR---IGDPGQSGRDGTPGTKGDKGADAIVPDYLLKGPKGDKGSMGFSGVPGPPGLSGAKGMDGPSGSPGLPGP---------KGEKGPPGIDGYPGRNGRPGVMGIQGPPGKPV 689 HSP 11 Score: 69.3218 bits (168), Expect = 3.307e-12 Identity = 97/238 (40.76%), Postives = 114/238 (47.90%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGP------SGGFGAPG---------------QAGVAG---VPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPG 256
G PG +G +G G GE G G+PG DG G G G G G G PG PG G PGL G G G +G+ G +G G +GP G PG G G +G G+ G+ G G+ G G+ G +G GPAG G G VG PG G G +G FG PG Q G G +PG PG G G+SG G NGP G G G G G G PG QG G+ G PG
Sbjct: 1278 GLPGKQGRSGPPGLMGEKGDDGLPGLDGRQGDKGDRGFNGVKGDRGYPGPPGMRGQPGLNGMVGAKGDYGLPGLSGIKGDQGPPGLPGIIGEKGNTGFPGKDGVPGIPGQRGEKGNPGLSGIPGPAGQRGLKGDVGLPGQFGPPGIPGPKGNTGLFGPPGLKGNPGPPGLPGIPGQEGPMGPRAIPGSPGVPGIKGSSGRPGFNGPPGPVGLPGMKGDRGFPGQPGLQGRPGIAGDPG 1515 HSP 12 Score: 65.4698 bits (158), Expect = 4.472e-11 Identity = 121/367 (32.97%), Postives = 140/367 (38.15%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGP------------------------------PGLPGQAGTPGSHGVA--GTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPN-------------------------------------------GPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGA------------SGSQGQNGPDGHDGKAGQDGSA-------GQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGK--GPNGPPGTPGTPGAQGLNGVPGFPG 313
G+PG G G G +GE G G G G+ G G PG PG NGVPG GP GP PGLPG G G A G G G G G PGS G G+ GP+G G G GR+G G+ P GP G G G G G+PG G+ G G FG G G+ G G+PG G G G QG++G DG G+AG G A G +G GP G G G+PG G G+ GQ + G G PG PG G G GP G G G PG GL G G+ G
Sbjct: 126 GFPGMEGLPGPKGTKGETGPQGTMGYKGDRGKMGVPG---YPGVNGVPGLLGPSGPKGDLGRDGCNGTDGLSGGPGMPGLPGPRGFPGLPGIKGIKGEPAYARPGAMGQKGEPGLDGLPGSMGNPGVPGPMGIKGDRGFPGRDGPKGNQAPKGQKGEMGLAFYGPKGVPGLPGPPGPPGSYEAVTGSGTDXTATTGPPGQRGEKGDMGERGSPGPMGAKGEKGEFGYNGLNGLNGEKGLPGHPGPRGREGPFGPPGPAGQKGDQGRDGYDGFPGRAGGKGEAVGGPGLPGLSGPEGPPGIKGEKGTPGLSGITGSPGQIGEKGSPGDPGYPGSRGQKGLSIPGPRGKDGYNGRPGNAGLKGERGYTG 489 HSP 13 Score: 62.3882 bits (150), Expect = 3.686e-10 Identity = 123/400 (30.75%), Postives = 147/400 (36.75%), Query Frame = 0
Query: 52 GVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPP-------------------------------------------------GPPGLPGQAG------TPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVG------------QSGLAGPNGRNGIPGSSGPNGPV----------GPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASG--------SQGQNGPDGHDGKAGQDGSAGQAGVPG-----------------PQGATGVPGSPG------------------PLGTAGTAGQAAQNGIGGLPGQ---PGRNGDDGGKGPNGPPGTPGT---PGAQGLNGVPGFPGFPGNLVVLPNKV 325
G G +GEPG G+PGS GN PG PG +G G G PG GP GPPG G+ G +PG G G G FG G +G G G G GP G Q G G +G +G PG +G G GP GP G G GTPG SG G+PGQ G G PG PG G+ G G G NG G+ G G+ G G+ GVPG +G G PG PG G G G NG+ G PG+ PG G G +G +G PG PG PG G +G PG G G ++P+ +
Sbjct: 227 GAMGQKGEPGLDGLPGSMGN---PGVPGPMGIKGDRGFPGRDGPKGNQAPKGQKGEMGLAFYGPKGVPGLPGPPGPPGSYEAVTGSGTDXTATTGPPGQRGEKGDMGERGSPGPMGAKGEKGEFGYNGLNGLNGEKGLPGHPGPRGREGPFGPPGPAGQKGDQGRDGYDGFPGRAGGKGEAVGGPGLPGLSGPEGPPGIKGEKGTPGL------SGITGSPGQIGEKGSPGDPGYPGSRGQKGLSIPGPRGKDGYNGRPGNAGLKGERGYTGERGVPGDSLEGTPGPPGPVGPIGEKGRDGQPGRPGLSGGKGDKGFKGGECQLCAPGMKGQKGVPGLNGLDGPPGERGMPGSLGAKGERGDDGSPGVPGRIGDPGQSGRDGTPGTKGDKGADAIVPDYL 617 HSP 14 Score: 60.4622 bits (145), Expect = 1.474e-9 Identity = 109/359 (30.36%), Postives = 136/359 (37.88%), Query Frame = 0
Query: 49 GPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGL----------------------------------------------------PGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGT--------------------SGSVGTPGNPG------------------SGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
GP G G +G+ G+ G PG G G G G G G NG G PG PGP G G+ GTPG G+ G+ G G +G G PG G G G + G G +G NG PG++G G G G G G G PG PG + G G G PG G+ G PG G G++GA G +G +G G G+ G G +G+ G PG +G G G G G G+PG PG + G KG +GP G+PG PG +G G PG G+PG
Sbjct: 318 GPPGQRGEKGDMGERGSPGPMGAKGEKGEFGYNGLNGLNGEKGLPGHPGPRGREGPFGPPGPAGQKGDQGRDGYDGFPGRAGGKGEAVGGPGLPGLSGPEGPPGIKGEKGTPGLSGITGSPGQIGEKGSPGDPGYPGSRGQKG-LSIPGPRGKDGYNGRPGNAGLKGERGYTGERGVPGDSLEGTPGPPGPVGPIGEKGRDGQPGRPGLSGGKGDKGFKGGECQLCAPGMKGQKGVPGLNGLDGPPGERGMPGSLGAKGERGDDGSPGVPGRIGDPGQSGRDGTPGTKGDKGADAIVPDYLLKGPKGDKGSMGFSGVPGPPGLS---GAKGMDGPSGSPGLPGPKGEKGPPGIDGYPGR 672 HSP 15 Score: 58.9214 bits (141), Expect = 4.644e-9 Identity = 102/263 (38.78%), Postives = 119/263 (45.25%), Query Frame = 0
Query: 43 GYPGPRG--------PAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTP 297
GYPG RG P G +G+ G PG G+ G G G G PG G PG PGP GP G G+ G PG G++G G G +G + G G G G +GL GP G G+PGS +G G G GS G PG G PGQ+G G PG G G GP G GS G +GVPGP G +G G GP G+ G G + G G+ G PGRNG G G GPPG P
Sbjct: 451 GYPGSRGQKGLSIPGPRGKDGYNGRPGNAGLKGERGYTGERGVPGDS----LEGTPGPPGPVGPIGEKGRDGQPGRPGLSGGKGDKGFKGGECQLCAPGMKGQKGVPGLNGLDGPPGERGMPGS------LGAKGERGDDGSPGVPGR---------IGDPGQSGRDGTPGTKGDKGADAIVPDYLLKGP------KGDKGSMGFSGVPGPPGLSGAKGMDGPSGSPGLPGPKGEKGPPGIDGYPGRNGRPGVMGIQGPPGKP 688 HSP 16 Score: 58.9214 bits (141), Expect = 5.320e-9 Identity = 108/296 (36.49%), Postives = 126/296 (42.57%), Query Frame = 0
Query: 59 EPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQA-------------------------------------GVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
+ GQ G PG +G GP GT G G GT G G G G PG PG G PG G +G G G G +GT GLSG G GL GP G G+PG G G A P G++G G P G G G G PGVPG G G G G++GP G+ GQ G G A G G +G G GSPGP+G G G+ NG+ GL G+ G G G +G GP G PG G +G G G+ GFPG
Sbjct: 121 DKGQRGFPGMEGLPGPKGTKGETGPQGTMGYKGDRGKMGVPGYPGVNGVPGLLGPSGPKGDLGRDGCNGT------DGLSGGPGMPGLPGPRGFPGLPGIKGIKGEPAYARP----GAMGQKGEP---------GLDGLPGSMGNPGVPGPMGIKGDRGFPGRDGPKGNQAPKGQKGEMGLAFYGPKGVPGLPGPPGPPGSYEAVTGSGTDXTATTGPPGQRGEKGDMGERGSPGPMGAKGEKGEFGYNGLNGLNGEKGLPGHPGPRGREGPFGPPGPAGQKGDQGRDGYDGFPGR 397
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000005417 (supercontig:LSalAtl2s:LSalAtl2s2921:9665:13131:1 gene:EMLSAG00000005417 transcript:EMLSAT00000005417 description:"maker-LSalAtl2s2921-snap-gene-0.4") HSP 1 Score: 102.064 bits (253), Expect = 1.666e-22 Identity = 94/307 (30.62%), Postives = 136/307 (44.30%), Query Frame = 0
Query: 300 PGAQGLNGVPGFPGFPGNLVVLPNKVDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDS--CAGDGVESQMCNVP-CPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTD-CPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDC-VETCTGTTQFKLLKPTNAAGISANGVTVTVTDKNAGSGFEMEFTADPTGVIELMHSGLQTVLVKVEKDGISPYTVELTLD-PSGGMFLLPVIEMLNAGETAVT 600
PG +G V P ++ +P WS WG WS C + CG+G Q R R C D H G S C G ES+ C++ C I+G A+W+ W+ C + +CG G +TR R+C+NP P +GG C D E+ CFT C +DG + + +G C + CG+G + ++R C++P P G C G + C V C + L T K G G E + G L T VE+D +++ L PSG +L V+ ++ GE VT
Sbjct: 234 PGCKGT-CVNNVPWTCTDIDTIPPGNTDEWSAWGRWSTC---SRTCGDGTQIRARTCAD----HNGVSGNCRGSSTESRRCSISNCKIDGHWAEWTRWAPC---SASCGTGSKTRFRSCSNPIPRYGGKPCAGLD--RENLKCFTKHCAIDGKWSSWQSWGQC---SASCGNGHRXRARECNSPSPAHGGLSCFGNSVDNQVCNVRECPIDASWSLW------------TQWTSCTKTCGEG-RRERQRNCDGA--LFGGRPCTGNSTVERD------MDIGLHGPSGQHVVLHVVLEIDRGEEIVT 503 HSP 2 Score: 81.2629 bits (199), Expect = 4.922e-16 Identity = 61/181 (33.70%), Postives = 93/181 (51.38%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNV-PCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFT-DC--PVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCVET 501
V G W+ WG WS C + C G + R+R C++ ++C G+G E+ CN PC ++G W W SC + +CG G+++R R C +P P GG +C + + ES TC C +DG +G++ + C + CG T+++SR CD+P P G+ C G Q C T
Sbjct: 642 VIGSWAQWGRWSTC---SKSCDGGSRSRSRPCSN-------NNCXGNGSENGRCNAKPCGVDGMWGQWQFWGSC---SVSCGNGVQSRRRQCDSPRPSSGGRNCRGS--SVESNTCIKPSCIQVIDGNWGQWIQWSGC---SATCGHATRSRSRQCDSPSPMNGGSFCSGDNNQISSCPNT 804 HSP 3 Score: 79.337 bits (194), Expect = 1.774e-15 Identity = 57/178 (32.02%), Postives = 87/178 (48.88%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNV-PCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTD-CPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCVE 500
+D WS W WS C CG G + R+R C P +GG C G + CN C + G A W WS+C + +C G +R+R C+N + G SE+ C C VDG +G++ +G+C + CG+G +++ R CD+P P G C G+ +S+ C++
Sbjct: 587 IDASWSIWTSWSTC---TKTCGGGSRRRSRTCT--PAQNGGQPCIGTATDESTCNTQECIVIGSWAQWGRWSTC---SKSCDGGSRSRSRPCSNNNCXGNG---------SENGRCNAKPCGVDGMWGQWQFWGSC---SVSCGNGVQSRRRQCDSPRPSSGGRNCRGSSVESNTCIK 744 HSP 4 Score: 76.2554 bits (186), Expect = 1.688e-14 Identity = 48/115 (41.74%), Postives = 58/115 (50.43%), Query Frame = 0
Query: 316 GNLVVLPNKVDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNVP-C--PINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSC 427
G P VDG+W W W C CGNG+Q R R C+ P PS GG +C G VES C P C I+G W +WS C + TCG +R+R C +PSP GG C
Sbjct: 683 GRCNAKPCGVDGMWGQWQFWGSCSVS---CGNGVQSRRRQCDSPRPSSGGRNCRGSSVESNTCIKPSCIQVIDGNWGQWIQWSGC---SATCGHATRSRSRQCDSPSPMNGGSFC 791
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000010332 (supercontig:LSalAtl2s:LSalAtl2s684:19416:35139:1 gene:EMLSAG00000010332 transcript:EMLSAT00000010332 description:"maker-LSalAtl2s684-augustus-gene-0.7") HSP 1 Score: 102.449 bits (254), Expect = 1.995e-22 Identity = 130/333 (39.04%), Postives = 152/333 (45.65%), Query Frame = 0
Query: 23 RQGRKVEQVASQCACPSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQA---------GTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSV---GTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQD---------------GSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGL---------PGQPGRNGDDGGKGPNGPPGTPGT---PGAQGLNGVPGFPGFPG 316
RQG K E+ P+ G G RG +G+ +GE G HG GS G G PG PG G+ G +G+PG+PGP G G G + GT G HG+ G G G G +G PGS G G+ GP G G G G G PG G G G G G G V G+PG PG G G G+PG+ G G PG G G G G +G GP G G AG G AG+ G G G G PG PG +G G G+ + GI G G G G+ G KGP GP G G PGA GL G G PG PG
Sbjct: 1006 RQGSKGEEGPRGVTGPAGQIGLTGKRGESGI---KGEMGDHGKVGSPGPSGLPGDPGPPGSKGADGIPGAPGPEGSQGEKGSSGAPGFPGPPGTDGKHGIQGPLGPKGEDGKAGAPGSPGARGIMGPEGPKGNPGAPGFPGNPGEQGKQGIKGEPGRPGEDGKVGDAGSPGEPGLRGDVGPSGSPGKEGPTGPPGKQGNTGLPGEKGDRGPLGPLGETGPAGDQGPPGVEGGPGLRGSPGPAGEVGSSGEMGKPGFPGKPGEIGPRGLKGKRGRRGIKGHRGSIGLSGEKGDMGEKGEHGSKGPQGPSGLKGETGGPGAXGLKGSEGPPGLPG 1335 HSP 2 Score: 100.138 bits (248), Expect = 1.047e-21 Identity = 112/265 (42.26%), Postives = 131/265 (49.43%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNP---GSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQG 304
G G +GP G G +G+ G G PG+ G GP G G PG G PG+PG G G+ G+ G PG G G AGS G G G G +G G GP G G G G G G GP GP+G GPAG G G G P GS GP+G G+ G+ G G PG PG G G G +G+ G GH GS G +G G G G GS GP G +G G+ G GL G G G G +GP GP GT GT G +G
Sbjct: 1098 GKHGIQGPLGPKGEDGKAGAPGSPGARGIMGPEG---PKGNPGAPGFPGNPGEQGKQGIKGEPGRPGEDGKVGDAGSPGEPGLRGDVGPSGSPGKEGPTGPPGKQGNTGLPGEKGDRGPLGPLGETGPAGDQGPPGVEGGPGLRGSPGPAGEVGSSGEMGKPGFPGKPGEIGPRGLKGKRGRRGIKGH------RGSIGLSGEKGDMGEKGEHGSKGPQGPSGLKGETGGPGAXGLKGSEGPPGLPGLEGPPGPKGTRGTSGLKG 1353 HSP 3 Score: 94.3597 bits (233), Expect = 4.927e-20 Identity = 123/348 (35.34%), Postives = 149/348 (42.82%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQ---AGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQS---------------------GLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVG---------------------------------TPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQG------ATGVPGSPGPLGTAGTAGQAAQ---------NGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
+G PGP G G G G PG G+PG G G G G +G PG G G PGPPG G G+ AG PG G+ G G G GP G G G +G GP GQ G GP GR+G+ G G GP GP G G G+ G + G G GP G G G G G GV G G +G +G +G++G G G G+ GS G +G+PG G A G+PG+PGP G+ G G + +G G+ G G G+DG G G PG G G +G G PG PGFPGN
Sbjct: 797 SGPPGPSGDTGAVGEPGNPGSPGVPGESGRPGETGKEGPIGAPGPQGKTGKPGPPGILGFVGERGLAGLPGMPGLKGETGPKGPSGPQGDKGQQGDTGNEGPAGQQGRIGPPGGPGIPGAKGGMGIPGFPGPTGRDGVIGPRGLPGPAGPLGEPGEDGAKGEIGGSGEKGFKGGKGSMGPPGPLGPRGPLGAKGSIGPVGEKGPPGMLGRQGSKGEEGPRGVTGPAGQIGLTGKRGESGIKGEMGDHGKVGSPGPSGLPGDPGPPGSKGADGIPGAPGPEGSQGEKGSSGAPGFPGPPGTDGKHGIQGPLGPKGEDGKAGAPGSPGARGIMGPEGPKGNPGAPGFPGN 1144 HSP 4 Score: 94.3597 bits (233), Expect = 5.322e-20 Identity = 130/354 (36.72%), Postives = 148/354 (41.81%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAG---------GSGLSGPVGQSGLAGPNGRNGIPG------------------SSGPNGPVGPAGPAGTSGSVGTPG---------------------NPGSGGPSGGFGAPGQAG---------VAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTP------------------------GTPGAQGLNGVPGFPG 313
P G+PGPRG V G GE G HG G G G G G +G G G PG+ G PG G G G+ G G AG G FG +G G PG AG G G G GL G GR+G PG S G GP G G G SG G PG G GP G GAPG+ G +G PG G G +G G+ G G G G+ G+ G G G PGPQG TG PG PG LG G + G+ GLPG PG G+ G KGP+GP G G PGA+G G+PGFPG
Sbjct: 583 PVGFPGPRG---VKGDRGERGIHGETGMKGEQGVEGLKGDMGEKGDRGNPGTVGKPGSEGPQGAKGSEGPRGEAGAIGPFGEKGKIGPPGFAGYPGGPGDKGDKGQQGSDGTPGLKGERGRDGQPGERGQTGSRGFRGKRGRRGSQGFTGPKGDTGQPGPSGPAGEPGMDGPXGPRGXPGEPGLPGISGKDGIKGPPGERGAPGEQGPTGPTGLIGQSGPPGPSGDTGAVGEPGNPGSPGVPGESGRPGETGKEGPIGAPGPQGKTGKPGPPGILGFVG------ERGLAGLPGMPGLKGETGPKGPSGPQGDKGQQGDTGNEGPAGQQGRIGPPGGPGIPGAKGGMGIPGFPG 927 HSP 5 Score: 94.3597 bits (233), Expect = 5.555e-20 Identity = 125/353 (35.41%), Postives = 146/353 (41.36%), Query Frame = 0
Query: 43 GYPGPRGPAGV---------------NGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAG------------TSGSVGTPGNPGSG------------------------------GPSGGFGAPGQAGVAGVPGV---------------PGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTP------GAQGLNGVPGFPGFPGN 317
G+PGPRG AG+ +G G PG G GS G+ GPPG G +G PG GV G G G+ G+ G G GV G G G +G G PG+ G G GP G G GP G G G G G +GP G AG GS GTPG G GP G G PG +G AG PG+ PG G G G G+ G G G G G GQ+G PGP G TG G PG G+ G G++ G PG+ G+ G G GP G G PG P G +GL G+PG PG G
Sbjct: 531 GFPGPRGFAGLPGPPGKPGLPGLPGSDGMPGNPGNPGNSGSKGSKGPPGHNGPVGFPGPRGVKGD---RGERGIHGETGMKGEQGVEGLKGDMGEKGDRGNPGTVGKPGSEGPQGAKGSEGPRGEAGAIGPFGEKGKIGPPGFAGYPGGPGDKGDKGQQGSDGTPGLKGERGRDGQPGERGQTGSRGFRGKRGRRGSQGFTGPKGDTGQPGPSGPAGEPGMDGPXGPRGXPGEPGLPGISGKDGIKGPPGERGAPGEQGPTGPTGLIGQSGPPGPSGDTGAVGEPGNPGSPGVPGES------GRPGETGKEGPIGAPGPQGKTGKPGPPGILGFVGERGLAGLPGMPGLKGE 874 HSP 6 Score: 87.4261 bits (215), Expect = 8.101e-18 Identity = 100/253 (39.53%), Postives = 116/253 (45.85%), Query Frame = 0
Query: 34 QCACPSSP--AGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPG------PPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVP------GVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVP---GSPGPLGTAGTAGQAAQ 269
+ P SP G GP GP G G G PG G G G G PG PG G G G PG PG P G PG G G PG G G G G RGP GP+G++G AG G G+ G G G GPAG G+SG +G PG PG G G G G+ G G+ G+ G G MG G G GP G G G+ G G G+ G +G G+P G PGP GT GT+G +
Sbjct: 1114 KAGAPGSPGARGIMGPEGPKGNPGAPGFPGNPGEQGKQGIKGEPGRPGEDGKVGDAGSPGEPGLRGDVGPSGSPGKEGPTGPPGKQGNTGLPGEKGDRGP------------LGPLGETGPAGDQGPPGVEGGPGLRGSPGPAGEVGSSGEMGKPGFPGKPGEIGPRGLKGKRGRRGIKGHRGSIGLSGEKGDMGEKGEHGSKGPQGPSGLKGETGGPGAXGLKGSEGPPGLPGLEGPPGPKGTRGTSGLKGE 1354 HSP 7 Score: 86.6557 bits (213), Expect = 1.253e-17 Identity = 115/300 (38.33%), Postives = 129/300 (43.00%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDG------------NFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAG------------GSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVG------PAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNG 307
P G GPRG AG G GE G+ G PG G G GTPG G G +G PG G G G G+ G GS G G G G GPSG G G GL G G+ G+ GP G G PG GP GP G P GP+G +G+VG PGNPGS PGVP G G+ G+ G G G PGPQG TG PG PG LG G + G+ GLPG PG G+ G KGP+GP G G G G G
Sbjct: 640 PQGAKGSEGPRGEAGAIGPFGEKGKIGPPGFAGYPGGPGDKGDKGQQGSDGTPGLKGERGRDGQPGERGQTGSRGFRGKRGRRGSQGFTGPKGDTGQPGPSGPAGEPGMDGPXGPRGXPGEPGLPGISGKDGIKGPPGERGAPGEQGPTGPTGLIGQSGPPGPSGDTGAVGEPGNPGS------------------PGVP------------------GESGRPGETGKEGPIGAPGPQGKTGKPGPPGILGFVG------ERGLAGLPGMPGLKGETGPKGPSGPQGDKGQQGDTGNEG 897 HSP 8 Score: 85.8853 bits (211), Expect = 2.280e-17 Identity = 112/301 (37.21%), Postives = 131/301 (43.52%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNG---------RNGIPGSSGPNGPVGPAGPAG---------------TSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKG------------PNGPPGTPGTPGAQGLNGVPG 310
GPRGP G+ G PG G+ G+ G G G G +G G G+ GSPG G G PG+ G G G G G G RG G PG G G G GQ G +GP+G G+PG G G GP G AG + G G PGNPG+ G G G PG G G PG G G G G G+ G G G G G G+ G G G G PGS GP G G+ G + G G G+ G+ G G G G GTPG G +G +G PG
Sbjct: 408 GPRGPMGLTGL---PGLTGMIGTSGIKGEEGQQGDMGPRGIRGMVGSPGLEGKRGRPGRDGERGLSGPVGPKGESGIRGLPGLPGDKGDRGYKGSQGQKGSSGPSGLAGDDGPPGXPGVPGEMGARGFPGPRGFAGLPGPPGKPGLPGLPGSDGMPGNPGNPGNSGSKGSKGPPGHNGPVGFPGPRGVKGDRGERGIHGETGMKGEQGVEGLKGDMGEKGDRGNPGTVGKPGSEGPQGAKGSEGPRGEAGAIGPFGEKGKIGPPGFAGYPGGPGDKGDKGQQGSDGTPGLKGERGRDGQPG 705 HSP 9 Score: 80.8777 bits (198), Expect = 8.108e-16 Identity = 122/319 (38.24%), Postives = 140/319 (43.89%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGP---------------------SGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGA------------PGQAGVAGVPGVPGTGGTMGASGS------------------QGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPG 313
GP GP G G +G+ G G G G GPPG PG G G G+PG PGP G G+ G G PG G G G G +G G G G G GPVG+ G G GR G G GP G GPAG G +G G G G G G G+ PG G G+PG PG G+ G GS QG GP G DGKAG GS G G+ GP+G G PG+PG G G G+ G+ G+PGR G+DG G G PG PG G G +G PG G
Sbjct: 879 GPSGPQGDKGQQGDTGNEGPAGQQGRIGPPGGPGIPGAKGGMGIPGFPGPTGRDGVIGPRGLPGPAGPLGEPGEDGAKGEIGGSGEKGFKGGKGSMGPPGPLGPRGPLGAKGSIGPVGEKGPPGMLGRQGSKGEEGPRGVTGPAGQIGLTGKRGESGIKGEMGDHGKVGSPGPSGLPGDPGPPGSKGADGIPGAPGPEGSQGEKGSSGAPGFPGPPGTDGKHGIQGPLGPKGEDGKAGAPGSPGARGIMGPEGPKGNPGAPGFPGNPGEQGKQ------GIKGEPGRPGEDGKVGDAGSPGEPGLRGDVGPSGSPGKEG 1191 HSP 10 Score: 77.0258 bits (188), Expect = 1.299e-14 Identity = 119/314 (37.90%), Postives = 140/314 (44.59%), Query Frame = 0
Query: 51 AGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPG---TNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVA------GVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGS---------------------------------------AGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
+G +G +G PG+ G PG G GP G G G PG G G PG PG PG+PG++G PG G G G+ G +G +G PG G + G VG+ GLAG G+PG G GP GP+GP G G G GN G G G G PG G+ G+PG PG G G G +G GP G G+ G+DG+ G+ G PG G G G GP G G AGQ G G G G GD G G GP G PG PG G G G PG PG
Sbjct: 767 SGKDGIKGPPGERGAPGEQGPTGPTGLIGQSGPPGPSGDTGAVGEPGNPGSPGVPGESGRPGETGKEGPIGAPGPQGKTGKPGPPG---ILGFVGERGLAG---LPGMPGLKGETGPKGPSGPQGDKGQQGDTGNEGPAGQQGRIGPPGGPGIPGAKGGMGIPGFPGPTGRDGVIGPRGLPGPAGPLGEPGEDGAKGEIGGSGEKGFKGGKGSMGPPGPLGPRGPLGAKGSIGPVGEKGPPGMLGRQGSKGEEGPRGVTGPAGQIGLTGKRGESGIKGEMGDHGKVGSPGPSGLPGDPGPPGSKGADGIPGAPG 1074 HSP 11 Score: 74.7146 bits (182), Expect = 6.241e-14 Identity = 114/323 (35.29%), Postives = 129/323 (39.94%), Query Frame = 0
Query: 55 GWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSP----------------GPPGP------PGLPGQAGTP------------GSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPS------GGFGAPGQAGVA---------------------GVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
G GEPG+ G+ G G GPPG L P + G P GP GP PGL G GT G G+ G GS G G G PG G GLSGPVG G +G G G+PG G G G G G+SG G G+ G G G G PG G A G PG PG G+ G+ G G NGP G G G G G+ G+ G TG+ G G G G G+ G G G+PG G G KG GP G G G G G G PGF G
Sbjct: 355 GLSGEPGRDGLDGMQGIQGPPGN--VLIIPTSMGSTKGPDNSLQEMISQAMTNLIGPRGPMGLTGLPGLTGMIGTSGIKGEEGQQGDMGPRGIRGMVGSPGLEGKRGRPGRDGERGLSGPVGPKGESGIRGLPGLPGDKGDRGYKGSQGQKGSSGPSGLAGDDGPPGXPGVPGEMGARGFPGPRGFAGLPGPPGKPGLPGLPGSDGMPGNPGNPGNSGSKGSKGPPGHNGPVGFPGPRGVKGDRGERGI---HGETGMKGEQGVEGLKGDMGEKGDRGNPGTVGKPGSEGPQGAKGSEGPRGEAGAIGPFGEKGKIGPPGFAG 672 HSP 12 Score: 73.9442 bits (180), Expect = 1.015e-13 Identity = 108/279 (38.71%), Postives = 122/279 (43.73%), Query Frame = 0
Query: 70 GNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSS------------GPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPG------TP------------GTPGAQGLNGVPGFPGFPGNL 318
G GPPG G G+ G G G GP G GL G+ G G G G G G+ GPSG PG G G G G G GP G G GSS G +G GP GP G G G PG+PG+ G G G G G PG PG G G G +G+ G G DGK G GS G+ G+ G G +G PG GP G G G GLPG+ G G G G GP G G G+ G G PGFPG PG +
Sbjct: 996 GEKGPPGMLGRQGSKGEEGPRGVTGPAGQIGLTGKRGESGIKGEMGDHGKVGSPGPSGLPGDPGPPGSKGADGIPGAPGPEGSQGEKGSSGAPGFPGPPGTDGKHGIQGPLGPKGEDGKAGAPGSPGA---RGIMGPEGPKGNPGAPGFPGNPGEQGKQGIKGEPGRPGEDGKVGDAGSPGEPGLRGDVGPSGSPGKEGPTGPPGKQGNT------GLPGEKGDRGPLGPLGETGPAGDQGPPGVEGGPGLRGSPGPAGEVGSSGEMGKPGFPGKPGEI 1265 HSP 13 Score: 70.4774 bits (171), Expect = 1.265e-12 Identity = 99/286 (34.62%), Postives = 121/286 (42.31%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQ---------------HGIPGSDGNFGPPGTPGALGTPGTN------------------GVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQA---------GVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDG 286
G PG +G G +G GE GQ G G G+ G PG G G PG + G G GPPG G PG+ G G G+ G SG PG +G +G G G G G G +G PG +G GP+G GP G +G G PG G G+ G+AG+PG+PG G G G G G G G G +G AGQ G+PG +G G+PG PGP G G G G G G+PG +G G
Sbjct: 690 GTPGLKGERGRDGQPGERGQTGSRGFRGKRGRRGSQGFTGPKGDTGQPGPSGPAGEPGMDGPXGPRGXPGEPGLPGISGKDGIKGPPGERGAPGEQGPTGPTGLIGQ---------SGPPGPSGDTGAVGEPGNPGSPGVPGESGRPGETGKEGPIGAPGPQGKTGKPGPPGI---------LGFVGERGLAGLPGMPGLKGETGPKGPSGPQGDKGQQGDTGNEGPAGQQGRIGPPGGPGIPGAKGGMGIPGFPGPTGRDGVIGPRGLPGPAGPLGEPGEDGAKG 957 HSP 14 Score: 70.0922 bits (170), Expect = 1.856e-12 Identity = 102/258 (39.53%), Postives = 123/258 (47.67%), Query Frame = 0
Query: 78 PGALGTPGTNGVPGSPGPPGPPG----LPGQAGTPGSHGVAGTAGSFGTR------GPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTA---------GTAGQAAQNGIGGLPGQPGRNGDDGGKGP---NGPPGTPGTPGAQGLNGVPGFPG 313
PG G PG +G+ G G GPPG +P G+ + G + ++ GP G G G GL+G +G SG+ G G+ G GP G G G G G G PG G G SG G G++G+ G+PG+PG G G GSQGQ G G G AG DG G GVPG GA G PG P G A G G +G+ G PG PG +G G KGP NGP G PG G +G G G G
Sbjct: 354 PGLSGEPGRDGLDGMQGIQGPPGNVLIIPTSMGS--TKGPDNSLQEMISQAMTNLIGPRGPMGLTGLPGLTGMIGTSGIKGEEGQQG---DMGPRGIRGMVGSPGLEGKRGRPGRDGERGLSGPVGPKGESGIRGLPGLPGDKGDRGYKGSQGQKGSSGPSGLAGDDGPPGXPGVPGEMGARGFPG---PRGFAGLPGPPGKPGLPGLPGSDGMPGNPGNPGNSGSKGSKGPPGHNGPVGFPGPRGVKGDRGERGIHG 603 HSP 15 Score: 68.1662 bits (165), Expect = 6.065e-12 Identity = 122/359 (33.98%), Postives = 150/359 (41.78%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVP---------------GSPGPPGP---------------PGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASG---------------SQGQNGPDGHDGKAGQDGSAGQ------------------AGVPGPQGATGVPGSPGPLGTAGTAGQ---------------AAQNGIGGLPGQPGRNGDDGGKGP------NGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G GP GP G +G G PG +PG G+ G G+ G G+ G +G+ G+ G PGP PGLPG G PG+ G G +GS G++GP G G G G G G G G +G G+ G G G G G G G+ GT G PGS GP G G+ G G AG G G G +G G QG +G G G+ G+DG G+ G GP+G TG PG GP G G G + ++GI G PG+ G G+ G GP +GPPG G GA G G PG PG PG
Sbjct: 468 GLSGPVGPKGESGIRGLPG---LPGDKGDRGYKGSQGQKGSSGPSGLAGDDGPPGXPGVPGEMGARGFPGPRGFAGLPGPPGKPGLPGLPGSDGMPGNPGNPGNSGSKGSKGPPGHNGPVGFPGPRGVKGDRGERGIHGETGMKGEQGVEGLKGDMGEKGDRGNPGTVGKPGSEGPQGAKGSEGPRGEAGAIGPFGEKGKIGPPGFAGYPGGPGDKGDKGQQGSDGTPGLKGERGRDGQPGERGQTGSRGFRGKRGRRGSQGFTGPKGDTGQPGPSGPAGEPGMDGPXGPRGXPGEPGLPGISGKDGIKGPPGERGAPGEQGPTGPTGLIGQSGPPGPSGDTGAVGEPGNPGSPGVPGE 823
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000002328 (supercontig:LSalAtl2s:LSalAtl2s143:679982:683460:1 gene:EMLSAG00000002328 transcript:EMLSAT00000002328 description:"augustus_masked-LSalAtl2s143-processed-gene-6.1") HSP 1 Score: 100.523 bits (249), Expect = 4.696e-22 Identity = 70/180 (38.89%), Postives = 92/180 (51.11%), Query Frame = 0
Query: 320 VLPNKVDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMC-NVPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCF-TDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDD 497
VL K+DG WS W W+ C + CG G + R R+C++P P +GG C G ES C + CP+ G + W W C + TCG G R R C +PSP GG SC P ES C +CP+DG + + + C + CG GT+ ++R CD PQF G C G FT D
Sbjct: 307 VLACKIDGGWSIWTKWTPC---SSTCGTGTKARFRSCSNPIPKYGGKICVGXASESAKCFSRYCPVEGRWSSWKSWGGC---SVTCGEGTRHRNRYCDSPSPAHGGPSC--FGPPVESTKCIEKECPIDGIWLSWTQWTTC---SKTCGPGTQERTRTCDG--PQFGGQSCSGNFTIERD 473 HSP 2 Score: 98.9821 bits (245), Expect = 1.408e-21 Identity = 67/182 (36.81%), Postives = 91/182 (50.00%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMC-NVPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCP-------DADPNSESRTCFTDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDC 498
V+G WS W W C CG G + R R C+ P P+HGG SC G VES C CPI+G W++W++C + TCG G + RTRTC P FGG SC D P + CP DG + E+ + C + C G++ + R C+NP P+F G C G+ ++ C
Sbjct: 369 VEGRWSSWKSWGGCSVT---CGEGTRHRNRYCDSPSPAHGGPSCFGPPVESTKCIEKECPIDGIWLSWTQWTTC---SKTCGPGTQERTRTC--DGPQFGGQSCSGNFTIERDVIPCWQ----IVVCPTDGEWSEWDTWSPC---SKTCESGSRFRQRHCNNPAPKFGGKTCRGSAIENGVC 535 HSP 3 Score: 95.1301 bits (235), Expect = 2.521e-20 Identity = 60/158 (37.97%), Postives = 89/158 (56.33%), Query Frame = 0
Query: 345 CGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNV-PCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTD-CPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCVE 500
CG+G Q+R R C D G +C G E++ C+V C I+GG + W++W+ C + TCG G + R R+C+NP P +GG C SES CF+ CPV+G + + +G C + CG+GT+ ++R CD+P P G C G +S C+E
Sbjct: 274 CGDGTQKRDRTCLDRNGVSG--NCVGKSDETRTCSVLACKIDGGWSIWTKWTPC---SSTCGTGTKARFRSCSNPIPKYGGKIC--VGXASESAKCFSRYCPVEGRWSSWKSWGGC---SVTCGEGTRHRNRYCDSPSPAHGGPSCFGPPVESTKCIE 421 HSP 4 Score: 95.1301 bits (235), Expect = 2.725e-20 Identity = 63/175 (36.00%), Postives = 80/175 (45.71%), Query Frame = 0
Query: 326 DGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMC-NVPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCV 499
DG W W W+ C CG G + R R CN+PPPS GG C+G G+E C C G W WS+C T TCG + TR RTC N S + G+ R CP+DGGF ++ + C G G +++ R C+NPVP G C G Q C
Sbjct: 697 DGNWGYWQEWTSCSVS---CGKGQKTRGRFCNNPPPSDGGKPCSGYGLEKSYCIQEECTTGGSWGQWGTWSAC---TLTCGNSVRTRARTCHNSSCEGEGI--------QTERCSVPKCPIDGGFSQWLLWSQCTADCKG-DRGNQSRRRFCNNPVPLHGGKGCAGEIKQKRYCT 856 HSP 5 Score: 87.8113 bits (216), Expect = 5.103e-18 Identity = 67/191 (35.08%), Postives = 95/191 (49.74%), Query Frame = 0
Query: 318 LVVLPNKVDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCN--VPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCVETCTGTT 506
+VV P DG WS W WS C + C +G + R R CN+P P GG +C G +E+ +CN V CPING W WS C + +CG G++ R RTCT P FGG C + + E + CPVDG + + + +C + C G + + R C + PQ C G+ + + C + TT
Sbjct: 480 IVVCP--TDGEWSEWDTWSPC---SKTCESGSRFRQRHCNNPAPKFGGKTCRGSAIENGVCNADVNCPINGKWNSWGRWSIC---SVSCGGGIQGRRRTCT--VPQFGGEPC-NGQSDQERQCNQIPCPVDGVWSLWSKWSSC---SKTCEGGFRQRIRECIS--PQLGTELCSGSSREIESCNNKISCTT 654 HSP 6 Score: 74.7146 bits (182), Expect = 4.984e-14 Identity = 64/215 (29.77%), Postives = 91/215 (42.33%), Query Frame = 0
Query: 298 GTPGAQGLNGVPGFPGFPGN--------LVVLPNKVDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNVPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCV-ETCT 503
G G + VP F G P N +P VDGVWS W WS C + C G ++R R C P G + C+G E + CN ++W+ WS+ + +CG GL R+R C G+ F+ DG +G + ++ +C + CG G KT+ R C+NP P G C G + C+ E CT
Sbjct: 563 GIQGRRRTCTVPQFGGEPCNGQSDQERQCNQIPCPVDGVWSLWSKWSSC---SKTCEGGFRQRIREC--ISPQLGTELCSGSSREIESCNNKISCTTDTSNWNTWSNWSSCSASCGHGLRVRSRACPTKGSCEVGLE-------------FS----DGNWGYWQEWTSC---SVSCGKGQKTRGRFCNNPPPSDGGKPCSGYGLEKSYCIQEECT 752
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000007460 (supercontig:LSalAtl2s:LSalAtl2s427:202770:210042:1 gene:EMLSAG00000007460 transcript:EMLSAT00000007460 description:"maker-LSalAtl2s427-augustus-gene-2.11") HSP 1 Score: 99.3673 bits (246), Expect = 1.687e-21 Identity = 119/295 (40.34%), Postives = 142/295 (48.14%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPG-----------PPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSG------GFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGP-----LGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
GP+G G+ G +G PG GI GS G G G PG G PG G+ G G PPG GLPG G PG+ G G G G G G PG+ G GL G G+ G+ G NGR G+PG G G G G G G +G PG G G G FG PG+ G G+ G PG G +G G+ G G G+ G G+ G AG PGP G G+ G G G G G QNG G+PG GR G+ G NG PG G G G+ G+ G+PG PG +
Sbjct: 829 GPKGDYGIPGRKGYPGSDGIEGSAGYKGLKGAPGTTGQPGNRGIIGDVGDIRPGYGGVGGPPGRAGLPGIFGDPGAPGTTGEPGKEGFAGLRGDPGTPGRMGLVGLKGKQGIPGSNGREGLPGIKGMQGDNGMQGLPGLPGVIGQPGLVGRMGIDGEKGGPGLFGLPGKQGFNGMKGYPGDPGEIGRRGAPGTALQKGETGERGFPGNPGMAGRPGPDGMPGLMGMKGDDAYIIAGNQGIKGSRGQNGYFGMPGTTGRKGE---MGENGLPGLQGYRGDDGIPGLKGYPGLPGQM 1120 HSP 2 Score: 99.3673 bits (246), Expect = 1.792e-21 Identity = 120/302 (39.74%), Postives = 136/302 (45.03%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGE-----PGQHGIPGS---DGNFGPPGTPGALGTPGTNGVPGS---------PGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNG--------DDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
AG PGP G G+ G +G+ G GI GS +G FG PGT G G G NG+PG PG G PGLPGQ GT G G G G G GP G PG G G G GQ GL G G +G G G G VG G + G GN G GP G PG G G PGV G G G G G G G G G G+ G G+PG V G PG G G G+ G+ G PG G +G DG G G G PG PG G +G+PG+ G G+
Sbjct: 1040 AGRPGPDGMPGLMGMKGDDAYIIAGNQGIKGSRGQNGYFGMPGTTGRKGEMGENGLPGLQGYRGDDGIPGLKGYPGLPGQMGTKGEEGDYGFEGLKGRPGPYGEPGLEGIPGKPGIFGQVGLRGEAGNDGFKGRRGMEGDVGERGLS-AGADEGEKGNIGLPGPD---GFPGMXGDEGFPGVQGVKGNSGTYGRPGLPGYMGMKGTKGDRGAYGDRGIPGSSPNYKVDGEPGENGRNGNYGRPGLKGMKGKPGLFGMDGLQGNKGERGDGADGERGDDGFPGIPGXAGQDGLPGYQGDRGDF 1337 HSP 3 Score: 98.9821 bits (245), Expect = 2.278e-21 Identity = 121/332 (36.45%), Postives = 141/332 (42.47%), Query Frame = 0
Query: 28 VEQVASQCACPSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPV----------GQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNP-----------------GSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGAS--GSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGA-------TGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDD------GGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
E VA G G +G G+ G +G G G G G G G G +G PG G PG PGP GP G G G+ G +G G G G G G PG G G GP G+ G G G G PG G G G +G G G G PG P G GP G G PG G+ G PG+PG G G + G G G DG DG G+DG G G PG +G TG G G G G +G +G+ GL G G GDD G G G GT G+ G +G+ G PG+PGF GN
Sbjct: 233 TEIVADVSVIYKGEKGLIGYKGEIGLYGRKGNQGWEGDRGESGGVGFNGAKGVIGAPGYRGKPGKPGPAGPVGPKGLKGSSGKYGRPGIPGKEGMIGEQGIPGRPGRQGEVGPTGIFDPNLAEEGKVGAVGAQGSEGFPGEDGSPGANGLSGNXGLKGEPGEPGTPGVQGRRGIPGIRIKGEAGDDGPKGYPGFPGAKGMKGNPGLPGDQGDEGETVYGPPGLAGXDGSDGIPGEDGVRGDIGFPGLKGYPGRGRPITGPTGEQGRQGYPGPSGLPGLDGLEGLKGSFGDKGDDCPFCQNGLVGEKGEEGTNGSXGYKGVQGFPGWPGFRGN 564 HSP 4 Score: 97.0561 bits (240), Expect = 9.295e-21 Identity = 130/372 (34.95%), Postives = 162/372 (43.55%), Query Frame = 0
Query: 5 VAIIVVEEREKLFLESE-ERQGRKVEQVASQCACPSSPAGYPGPRGPAGVNGWEGEPGQ---------HGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPG----QAGTPGSHGVAGTAGSFGTRGPSGTPGS---AGGSGLSGPVGQSGLAGPNGRNGIPG-----SSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGG--FGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGH-------DGKAGQDGSAGQAGVPGPQGATGVPGS---------------PGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGP---NGPPGTPGTPGAQGLNGVPGFPGFPGNLVVLPNKVDG 327
V++I E+ + + E GRK Q S G+ G +G G G+ G+PG+ G+ GS G +G PG PG G G G+PG PG G G G G G G GS G G G+PG+ +G GL G G+ G G GR GIPG +G +GP G G G G G PG PG G G +G PG AG G G+PG G G G G G G G+ G+ G G +G+PG G G+ GS G G GT G G+ G PG PG G+ G KG G PG G PG GL G G+ G G+L+ L N + G
Sbjct: 239 VSVIYKGEKGLIGYKGEIGLYGRKGNQGWEGDRGESGGVGFNGAKGVIGAPGYRGKPGKPGPAGPVGPKGLKGSSGKYGRPGIPGKEGMIGEQGIPGRPGRQGEVGPTGIFDPNLAEEGKVGAVGAQGSEGFPGEDGSPGANGLSGNXGLKGEPGEPGTPGVQGRRGIPGIRIKGEAGDDGPKGYPGFPGAKGMKGNPGLPGDQGDEGETVYGPPGLAGXDGSDGIPGEDGVRGDIGFPGLKGYPGRGRPITGPTGEQGRQGYPGPSGLPGLDGLEGLKGSFGDKGDDCPFCQNGLVGEKGEEGTNGSXGYKGVQGFPGWPGFRGNKGIKGYMGIKGWPGQSGPPGMSGLEGGKGYKGDQGSLLGLENTIAG 610 HSP 5 Score: 90.8929 bits (224), Expect = 6.609e-19 Identity = 117/308 (37.99%), Postives = 140/308 (45.45%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNG---------VPGSP---------------GPPGPPGLPGQAGTPGSHGVAGTAGSFGTRG--PSGTPGSAGGSGLSGPVGQSGLAGPNGRNG---IPGSSGPNGPVGPAGPA-----GTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVP------------GTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQG 304
G PGP G G+ G EG PG G+ G+ G +G PG PG +G GT G +PGS G G PGL G G PG G+ G G+ G RG G G G G+ G GQ GL G G G +PG G G +G GP+ G SG G G PG G G G PG G+ G+PG+ G G G GS G G G G G G+ G G PGPQ G+PG G G G G+ GI G+PG G++GD G G G G+PG PG +G
Sbjct: 1198 GLPGPDGFPGMXGDEGFPGVQGVKGNSGTYGRPGLPGYMGMKGTKGDRGAYGDRGIPGSSPNYKVDGEPGENGRNGNYGRPGLKGMKGKPGLFGMDGLQGNKGERGDGADGERGDDGFPGIPGXAGQDGLPGYQGDRGDFGMPGLKGEMGRMGINGPSLRGMNGESGRPGLYGGPGFEGMKGFMGDPGFPGIPGIPGMKGXPGYFGPPGLEGLLGKPGLPGSSGLMGQPGEIGSQGVPGAPGFIGQPGPQNMPGLPGVDGFKGKNGDNGRDGFPGIQGVPGTKGKSGDVGFPGEGGAIGSPGIPGRRG 1505 HSP 6 Score: 90.1225 bits (222), Expect = 1.076e-18 Identity = 112/277 (40.43%), Postives = 128/277 (46.21%), Query Frame = 0
Query: 45 PGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPA---GTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
PG G G G GEPG+ G G G+ G PG G +G G G+PGS G G PG+ G G G G+ G G G G G G G G G G G G NG G PG G G G G A G +G G PGNPG G G G PG G+ G G G GS+GQNG G G G+ G G+ G+PG QG G G PG G GLPGQ G G++G G G G PG G GL G+PG PG G +
Sbjct: 896 PGIFGDPGAPGTTGEPGKEGFAGLRGDPGTPGRMGLVGLKGKQGIPGSNGREGLPGIKGMQGDNGMQGLPGLPGVIGQPGLVGRMGIDGEKGGPGLFGLPGKQGFNGMKGYPGDPGEIGRRGAPGTALQKGETGERGFPGNPGMAGRPGPDGMPGLMGMKGDDAYI-IAGNQGIKGSRGQNGYFGMPGTTGRKGEMGENGLPGLQGYRGDDGIPG------------LKGYPGLPGQMGTKGEEGDYGFEGLKGRPGPYGEPGLEGIPGKPGIFGQV 1159 HSP 7 Score: 87.8113 bits (216), Expect = 6.764e-18 Identity = 112/293 (38.23%), Postives = 128/293 (43.69%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQA-----------------GVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
G PG G G+ GEPG+ G G +G GPP G+PG G G PG+ G G G G +G G G +G G PG G L G G G GP G GIPG G G G G AG G G PG G G G G G G+ G PG PGT G G G G G G G+ G G G+ G+PG G G+PG G G G G G+ G PG GR G DG KG G G PG QG NG+ G+PG PG +
Sbjct: 734 GQPGNSNNKGDRGFAGEPGEKGQLGYEGEQGPP----------QWGLPGLEGYAGDPGINGMIGYLGERGDSGIDGEQGLKGLKGMPGERGRDILRGQTGNKGAIGPKGDYGIPGRKGYPGSDGIEGSAGYKGLKGAPGTTGQPGNRGIIGDVGDIRPGYGGVGGPPGRAGLPGIFGDPGAPGTTGEPGKEGFAGLRGDPGTPGRMGLVGLKGKQGIPGSNGREGLPGIKGMQGDNGMQGLPGLPGVIGQPGLVGRMGIDGEKGGP---GLFGLPGKQGFNGMKGYPGDPGEI 1013 HSP 8 Score: 85.5001 bits (210), Expect = 2.941e-17 Identity = 115/313 (36.74%), Postives = 135/313 (43.13%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPP---------------GPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNG--------RNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIG-----GLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVVLPNKVD 326
G G +G G NG EG PG G+ G +G G PG PG +G PG G G G G G PG G G G GTA G G G PG+ G +G GP G GL G G GI GS G NG G G G G +G G PG G G G PG G G+PG GT G G G +G G G G+ G +G G+ G+ G G G G+ G G G G + G+ G G G G DG G G G PG G +G +G G PG PG + + K D
Sbjct: 932 VGLKGKQGIPGSNGREGLPGIKGMQGDNGMQGLPGLPGVIGQPGLVGRMGIDGEKGGPGLFGLPGKQGFNGMKGYPGDPGEIGRRGAPGTALQKGETGERGFPGNPGMAGRPGPDGMPGLMGMKGDDAYIIAGNQGIKGSRGQNGYFGMPGTTGRKGEMGENGLPGLQGYRGDDGIPGLKGYPGLPGQMGTKGEEGDYGFEGLKGRPGPYGEPGLEGIPGKPGIFGQVGLRGEAGNDGFKGRRGMEGDVGERGLSAGADEGEKGNIGLPGPDGFPGMXGDEGFPGVQGVKGNSGTYGRPGLPGYMGMKGTKGD 1244 HSP 9 Score: 80.1073 bits (196), Expect = 1.544e-15 Identity = 114/339 (33.63%), Postives = 137/339 (40.41%), Query Frame = 0
Query: 37 CPSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGT--------AGSFGTRGPSGTPGSAGGSGLSGPVGQ---------SGLAGPNGRNGIPGSSGPNGPVGPAGPAGT------------SGSVGTPGNPGSGGPSGGFGAPGQAG-------VAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAG--------QAGVPGPQGATGVPGSPGPLGTAGTAGQA---AQNGIGGLPGQPGRNGDD------------GGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
CP G G +G G NG G G G PG PG G G G G+ G PG GPPG+ G G G G G+ AG G G G PG G GL GP G G+ G G G PG G NG GP GP G +G +G G G G G +G G G +A + G G+ G MG G+ G G G+ G+ G G Q G+PG +G G PG G +G G G + + G+ GL G PG G D G KG G PG G PG+ G+ G G+ G G
Sbjct: 527 CPFCQNGLVGEKGEEGTNGSXGYKGVQGFPGW------PGFRGNKGIKGYMGIKGWPGQSGPPGMSGLEGGKGYKGDQGSLLGLENTIAGEIGDLGVGGFPGLQGSKGLQGPFGNPGIPGLPGFKGMKGGPGTYGAPGRPGMNGQPGPQGPVGADIYLNPYEITELTGDIGFEGQKGIKGQKGPYGEWGAKGDPMPPSIMASIVGEKGSKGEMGQPGNSNNKGDRGFAGEPGEKGQLGYEGEQGPPQWGLPGLEGYAGDPGINGMIGYLGERGDSGIDGEQGLKGLKGMPGERGRDILRGQTGNKGAIGPKGDYGIPGRKGYPGSDGIEGSAGYKGLKG 859 HSP 10 Score: 75.8702 bits (185), Expect = 2.642e-14 Identity = 115/317 (36.28%), Postives = 135/317 (42.59%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGT-SGSVGTPGNPGS------------GGPSGGFG----------APGQAGVAGVPGVPG--------------TGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
+ P G GP GP+G G +G+ G G G G G G PG G PG GV G GP G GL G GT G G+ G +GS G RGP G G G ++G G GL P GI G G NG GP G G SGS G+ G G G G FG G+ G G+PG G G G G +G+ G G G G +G G++G G GA GV G+PG G G G A G GL G G+ G PG PG G G G+PG PG G +
Sbjct: 43 TGPPGEVGPDGPSGPKGQKGDYGSSGNMGEKGIRGDTGVPGFRGMPGIPGVSGDIGPKGIEGLSGCNGTNGCDGIPGFSGSHGARGPQGIRGFPG---IAGEAGDGGLNSP----GIKGERGVNGQPGPHGIDGRQSGSTGSKGERGDFGLPGRPGPPGEPGYHGDFGDTIPNSESYKYKGEQGEVGIPGPRGDDTITEIVADVSVIYKGEKGLIGYKGEIGLYGRKGNQGWEGDRGESGGVGFNGAKGVIGAPGYRGKPGKPGPAGPVGPKGLKGSSGKYGR---------PGIPGKEGMIGEQGIPGRPGRQGEV 343 HSP 11 Score: 73.1738 bits (178), Expect = 2.008e-13 Identity = 118/342 (34.50%), Postives = 142/342 (41.52%), Query Frame = 0
Query: 33 SQCACPSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPG-QAGTPGSHGVAG---------------TAGSF-------------GTRGPSGTPG-----------------SAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGS---VGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGAS------GSQGQNGPDG-HDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGK-----GPNGPPGTPGTPGAQGLNGVPGFPG 313
S C + G PG G G G +G G GI G G+ G L +PG G G G PGP G+ G Q+G+ GS G G G F G +G G PG G GL G G+ GL G G G G G +G VG G G G+ G PG PG GP G G G +G G PG+PG G +G G QG+ GP G D ++G G G G +G G GSPG G +G G + G G PG GR G G + G +GP G PG PGA+G+ G PG PG
Sbjct: 106 SGCNGTNGCDGIPGFSGSHGARGPQGIRGFPGIAGEAGD-------GGLNSPGIKGERGVNGQPGPHGIDGRQSGSTGSKGERGDFGLPGRPGPPGEPGYHGDFGDTIPNSESYKYKGEQGEVGIPGPRGDDTITEIVADVSVIYKGEKGLIGYKGEIGLYGRKGNQGWEGDRGESGGVGFNGAKGVIGAPGYRGKPGKPGPAGPVGPKGLKGSSGKYGRPGIPGKEGMIGEQGIPGRPGRQGEVGPTGIFDPNLAEEGKVGAVGAQGSEGFPGEDGSPGANGLSGNXGLKGEPGEPGTPGVQGRRGIPGIRIKGEAGDDGPKGYPGFPGAKGMKGNPGLPG 440 HSP 12 Score: 72.7886 bits (177), Expect = 2.422e-13 Identity = 116/331 (35.05%), Postives = 131/331 (39.58%), Query Frame = 0
Query: 49 GPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGT---PGTNGVPGSPGPPGPPG------------------LPGQAGTPGSHGVAGTAGSFGTRGPSGTP----------GSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGP--------AGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTG---------GTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQN--------------GIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G GV G+ G G G+ G GN G PG PG G PGT G PG PG G PG L G G G G+ G G +G G G P G G G G G S G G G PG G G G GP G +G G G G G G G G+ G+ G+ G+PG G GA G +G G G G G DG G AG G +GA G G PG G G G GI G PG PG G+ G +G G G PGTPG GL G+ G G PG+
Sbjct: 613 GDLGVGGFPGLQGSKGLQGPFGNPGIPGLPGFKGMKGGPGTYGAPGRPGMNGQPGPQGPVGADIYLNPYEITELTGDIGFEGQKGIKGQKGPYGEWGAKGDPMPPSIMASIVGEKGSKGEMGQPGNSNNKGDRGFAGEPGEKGQLGYEGEQGPPQWGLPGLEGYAGDPGINGMIGYLGERGDSGIDGEQGLKGLKGMPGERGRDILRGQTGNKGAIGPKGDYGIPGRKGYPGSDGIEGSAGYKGLKGAPGTTGQPGNRGIIGDVGDIRPGYGGVGGPPGRAGLPGIFGDPGAPGTTGEPGKEGFAGLRGDPGTPGRMGLVGLKGKQGIPGS 943 HSP 13 Score: 71.2478 bits (173), Expect = 8.050e-13 Identity = 123/372 (33.06%), Postives = 146/372 (39.25%), Query Frame = 0
Query: 35 CACPSSPA-GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGL------AGPNGRN--GIPGSSGPNGPVGPAGPAGT-SGSVGTPGNPGS-------------------------------GGPSGGFGAPG-----------------QAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNG----------IG--GLPGQPGRNGD-------------------DGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
C C G+PG G G G GE G G G G G G+ G +G G G G PG G PG+PG +G G G+ G +G GT G G PG +G G GP G G AG G N GI G G NG GP G G SGS G+ G G G G G PG G G+ G G G G G+QG G G G G +G+ G G PG +G G PG GP+G G G + + G IG G+PG+PGR G+ G +G G PG G+PGA GL+G G G PG
Sbjct: 23 CRCSGKGVTGHPGLSGMRGQTGPPGEVGPDGPSGPKGQKGDYGSSGNMGEKGIRGDTGVPGFRGMPGIPGVSGDIGPKGIEGLSGCNGTNGCDGIPGFSGSHGARGPQGIRGFPGIAGEAGDGGLNSPGIKGERGVNGQPGPHGIDGRQSGSTGSKGERGDFGLPGRPGPPGEPGYHGDFGDTIPNSESYKYKGEQGEVGIPGPRGDDTITEIVADVSVIYKGEKGLIGYKGEIGLYGRKGNQGWEGDRGESGGVGFNGAKGVIGAPGYRGKPGKPGPAGPVGPKGLKGSSGKYGRPGIPGKEGMIGEQGIPGRPGRQGEVGPTGIFDPNLAEEGKVGAVGAQGSEGFPGEDGSPGANGLSGNXGLKGEPGE 394 HSP 14 Score: 63.929 bits (154), Expect = 1.274e-10 Identity = 104/304 (34.21%), Postives = 123/304 (40.46%), Query Frame = 0
Query: 76 GTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGS------HGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPG----TGGTMGASGSQGQNG------------PDGHDGKAGQ----------DGSAGQAGVPGPQ-----------------------------GATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
G PG G G G PG GP GP G GQ G GS G+ G G G RG G PG +G G G G SG G NG +GIPG SG +G GP G G G G G+ GG +PG G GV G PG G G++GS+G+ G G+ G G G G+ G+PGP+ G G G+ G G G +G NG G+ G PG G G GP GP G G G+ G G PG PG G +
Sbjct: 32 GHPGLSGMRGQTGPPGEVGPDGPSGPKGQKGDYGSSGNMGEKGIRGDTGVPGFRGMPGIPGVSGDIGPKGIEGLSGCNGTNGCDGIPGFSGSHGARGPQGIRGFPGIAGEAGD-------GGLNSPGIKGERGVNGQPGPHGIDGRQSGSTGSKGERGDFGLPGRPGPPGEPGYHGDFGDTIPNSESYKYKGEQGEVGIPGPRGDDTITEIVADVSVIYKGEKGLIGYKGEIGLYGRKGNQGWEGDRGESGGVGFNGAKGVIGAPGYRGKPGKPGPAGPVGPKGLKGSSGKYGRPGIPGKEGMI 328 HSP 15 Score: 62.7734 bits (151), Expect = 2.882e-10 Identity = 65/154 (42.21%), Postives = 73/154 (47.40%), Query Frame = 0
Query: 52 GVNGWEGEPGQHGIPGSDGN---FGPPGTPGALGTPGTN------------GVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSG 190
G+NG G PG +G PG +G G PG PG G PG G+ G PG PG GL GQ G GS GV G G G GP PG G G G G +G G G G+PG+ G +G VG G G GS G PG GS P G
Sbjct: 1358 GMNGESGRPGLYGGPGFEGMKGFMGDPGFPGIPGIPGMKGXPGYFGPPGLEGLLGKPGLPGSSGLMGQPGEIGSQGVPGAPGFIGQPGPQNMPGLPGVDGFKGKNGDNGRDGFPGIQGVPGTKGKSGDVGFPGEGGAIGSPGIPGRRGSDAPLG 1511 HSP 16 Score: 58.9214 bits (141), Expect = 4.645e-9 Identity = 59/150 (39.33%), Postives = 73/150 (48.67%), Query Frame = 0
Query: 193 GAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPG-----------TPGAQGLNGVPGFPGFPGNLVVLPNKVDGVWSG 331
G PG +G+ G G PG G G SG +GQ G G G G+ G G GVPG +G G+PG G +G G G + NG G G PG +G G +GP G G PG +PG +G GV G PG P+ +DG SG
Sbjct: 32 GHPGLSGMRGQTGPPGEVGPDGPSGPKGQKGDYGSSGNMGEKGIRGDTGVPGFRGMPGIPGVSGDIGPKGIEGLSGCNGTNGCDGIPGFSGSHGARGPQGIRGFPGIAGEAGDGGLNSPGIKGERGVNGQPG--------PHGIDGRQSG 173
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000010397 (supercontig:LSalAtl2s:LSalAtl2s68:326217:339785:1 gene:EMLSAG00000010397 transcript:EMLSAT00000010397 description:"maker-LSalAtl2s68-snap-gene-3.35") HSP 1 Score: 97.4413 bits (241), Expect = 2.292e-21 Identity = 77/264 (29.17%), Postives = 121/264 (45.83%), Query Frame = 0
Query: 327 GVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNVP-CPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCF-TDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCVETCTGTTQFKLLKPTNAAGISANGVTVTVTDKNAGSGFEMEFTADPTGVIELMHSGLQTV--LVKVEKDGISPYTVEL-TLDPSGGMFL 585
G WS W WS C + CG+G Q R R C + S +C G + Q C + C I+G A W+ WS C + +CG G +R+R C++P P +GG C + +E+ CF T CP+ G + + ++G + CG+GT+ + R CD+P P GA C+G +Q++ T F P +A + T + G M +P G Q+ + +EKD I + ++ T+D +L
Sbjct: 232 GQWSLWSTWSSC---SKSCGDGEQRRDRTCGNGERSQ--QNCVGQSSQGQSCVIANCKIDGEWARWTRWSPC---STSCGTGFRSRSRACSDPIPRYGGNRCSGSP--TETVKCFSTFCPIAGRWSSWQZWGQ---LSVSCGEGTRQRQRRCDSPAPAHRGASCIGESSQTN---------TLFIKECPVDAEWSLWSRWTACSKSCDRGQKSRMRHCGEPL-------FGGQSCPGNITIEKDVIDCWVRQVCTVDGKWSNWL 466 HSP 2 Score: 92.4337 bits (228), Expect = 9.380e-20 Identity = 63/187 (33.69%), Postives = 95/187 (50.80%), Query Frame = 0
Query: 317 NLVVLPNKVDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMC-NVPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCF-TDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCVET 501
+ V+ K+DG W+ W WS C + CG G + R+RAC+DP P +GG+ C+G E+ C + CPI G + W +W + +CG G R R C +P+P G SC +S++ T F +CPVD + + + AC + C G K++ R C P+ F G C G T D ++
Sbjct: 277 SCVIANCKIDGEWARWTRWSPC---STSCGTGFRSRSRACSDPIPRYGGNRCSGSPTETVKCFSTFCPIAGRWSSWQZWG---QLSVSCGEGTRQRQRRCDSPAPAHRGASC--IGESSQTNTLFIKECPVDAEWSLWSRWTAC---SKSCDRGQKSRMRHCGEPL--FGGQSCPGNITIEKDVIDC 450 HSP 3 Score: 90.8929 bits (224), Expect = 2.841e-19 Identity = 57/178 (32.02%), Postives = 92/178 (51.69%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNVP-CPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCP-DADPNSESRTCFTD--CPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDC 498
+ G WS W W + + CG G ++R R C+ P P+H G SC G+ ++ + CP++ + WS W++C + +C G ++R R C P FGG SCP + + C+ C VDG + + ++ +C CG GT+ + R CDNP P+F G C+G+ + +C
Sbjct: 342 IAGRWSSWQZWGQ---LSVSCGEGTRQRQRRCDSPAPAHRGASCIGESSQTNTLFIKECPVDAEWSLWSRWTAC---SKSCDRGQKSRMRHCGEPL--FGGQSCPGNITIEKDVIDCWVRQVCTVDGKWSNWLEWSSC---TVTCGGGTRQRRRNCDNPAPKFGGQRCLGSEFDTQNC 508 HSP 4 Score: 88.5817 bits (218), Expect = 1.520e-18 Identity = 63/177 (35.59%), Postives = 94/177 (53.11%), Query Frame = 0
Query: 318 LVVLPNKVDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGD-GVESQM--CNVP--CPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTD-CPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAEC 488
L + VD WS W W+ C + C G + R R C +P GG SC G+ +E + C V C ++G ++W EWSSC T TCG G R R C NP+P FGG C ++ ++++ C TD CP+DG + ++ + C + CG G++ + R+C+N P+F G C
Sbjct: 392 LFIKECPVDAEWSLWSRWTAC---SKSCDRGQKSRMRHCGEPL--FGGQSCPGNITIEKDVIDCWVRQVCTVDGKWSNWLEWSSC---TVTCGGGTRQRRRNCDNPAPKFGGQRCLGSEFDTQN--CETDSCPIDGRWSQWRQWSQC---SKTCGSGSQKRERVCNN--PRFGGKAC 553
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000008518 (supercontig:LSalAtl2s:LSalAtl2s524:84376:100552:-1 gene:EMLSAG00000008518 transcript:EMLSAT00000008518 description:"maker-LSalAtl2s524-snap-gene-1.54") HSP 1 Score: 93.2041 bits (230), Expect = 5.401e-20 Identity = 59/167 (35.33%), Postives = 87/167 (52.10%), Query Frame = 0
Query: 366 DSCAGDGVESQMCNVP-CPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCF-TDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDC-VETCTGTTQFKLLKPTNAAGISA-NGVTVTV 528
+SC+G+ VE++ C++ C ING + W+ WS C + +CG GL R R C NP P +GG SC A N E +CF +CP DG + + D+ C + CG G K + R CD+P P G C G +S+ C + C T ++ + +S NGV +
Sbjct: 173 ESCSGNSVETKDCHLAYCKINGHWSLWTSWSIC---SASCGEGLVKRIRLCDNPHPRYGGSSC--AGRNEELMSCFYRECPKDGEWSLWEDWSHC---SRPCGIGFKNRQRYCDSPTPDHSGKYCFGLNYESNTCNLFDCNSTVKWLXWXEWXSCSLSCGNGVRTRI 331 HSP 2 Score: 90.8929 bits (224), Expect = 3.058e-19 Identity = 56/155 (36.13%), Postives = 81/155 (52.26%), Query Frame = 0
Query: 324 KVDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNV-PCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTC-FTDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLC 476
K++G WS W WS C + CG G+ +R R C++P P +GG SCAG E C CP +G + W +WS H + CG+G + R R C +P+PD G C N ES TC DC + + ++ +C + CG+G +T+ R C
Sbjct: 191 KINGHWSLWTSWSIC---SASCGEGLVKRIRLCDNPHPRYGGSSCAGRNEELMSCFYRECPKDGEWSLWEDWS---HCSRPCGIGFKNRQRYCDSPTPDHSGKYC--FGLNYESNTCNLFDCNSTVKWLXWXEWXSC---SLSCGNGVRTRIRRC 334 HSP 3 Score: 84.3445 bits (207), Expect = 3.793e-17 Identity = 67/183 (36.61%), Postives = 90/183 (49.18%), Query Frame = 0
Query: 324 KVDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMC-------NVPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCV 499
++ G WS W WS+C + CG G+ R R CN+P PS G C+G G ES++C NV + GL W+ WS C + TCG G TRTR C +P GG+ P + DG +G + ++ C + CG+GTKT+ R CDNP P G C G Q DC+
Sbjct: 366 QIQGHWSTWEHWSQC---STSCGVGISIRERLCNNPIPSEMGKPCSGLGYESRICFGALCSDNVE---HWGL--WALWSKC---SLTCGRGKRTRTRECLHPD---GGIIPCKGIPKEK----------DGEWGFWKEWSDC---SASCGEGTKTRIRKCDNPKPDGNGRPCPGLSMQKGDCL 521
BLAST of collagen alpha-1 chain-like vs. SwissProt
Match: gi|115347|sp|P27393.1|CO4A2_ASCSU (RecName: Full=Collagen alpha-2(IV) chain; Flags: Precursor) HSP 1 Score: 115.161 bits (287), Expect = 6.894e-25 Identity = 128/313 (40.89%), Postives = 150/313 (47.92%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGN------------FGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGV--------AGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFP------------------GFPGN 317
G+PG +G AG+ G G PGQ G+PG G GPPG PG +G PG G G G PG PG G G PG G AG G+ G GP G GSAG G G G+ GL G + G GP G G AG G G G PG PG G +G G PGQ G AG+PG+PG G G G +G+ G G+ G AG G G G+PG +G G+ G PG G G G+ G GLPG PG G+ G GP GP G PG PG +G G+PGFP G G+
Sbjct: 1106 GFPGLKGEAGLPGAPGLPGQDGLPGLPGQKGESGFPGQPGLVGPPGLPGKMGAPGIRGEKGDAGLPGLPGERGLDGLPGQKGEAGFPGAPGLPGPVGPKGSAGAPGFPGLKGEPGLPG------LEGQPGPRGMKGEAGLPGAPGRDGLPGLPGMKGEAGLPGLPGQPGKSITGPKGNAGLPGLPGKDGLPGLPGLKGEPGKPGYAGAAGIKGEPGLPGIPGAKGEPGLSGIPGKRGNDGIPGKP---GPAGLPGLPGMKGESGLPGPQGPAGLPGLPGLKGEPGLPGFPGQKGETGFPGQPGIPGLPGMKGD 1409 HSP 2 Score: 108.612 bits (270), Expect = 6.599e-23 Identity = 123/289 (42.56%), Postives = 139/289 (48.10%), Query Frame = 0
Query: 49 GPAGVNGWEGEPGQHGIPGSDG--------------------NFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
GPA +G +GEPG G PG G +G PG G G PG G PG PG PGP GL G G PG G AG G+ G G G PG G G SG GQ GL GP G +PG +G G G G G PG PG G G PGQ G AG PG PG G +G GS G G G G+ G G GQ G G +G G+PG+PG G G G + G+ GLPGQPG++ GP G G PG PG GL G+PG G PG
Sbjct: 1029 GPAARDGEKGEPGLPGQPGLRGPQGPPGLPGLPGLKGDEGQPGYGAPGLMGEKGLPGLPGKPGRPGAPGPKGLDGAPGFPGLKGEAGLPGAPGLPGQDGLPGLPGQKGESGFPGQPGLVGPPG---LPGK------MGAPGIRGEKGDAGLPGLPGE---RGLDGLPGQKGEAGFPGAPGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGEAGLPGAPGRDGLPGLPGMKGEAGLPGLPGQPGKSIT----GPKGNAGLPGLPGKDGLPGLPGLKGEPGK 1301 HSP 3 Score: 107.842 bits (268), Expect = 1.269e-22 Identity = 134/322 (41.61%), Postives = 152/322 (47.20%), Query Frame = 0
Query: 28 VEQVASQCACPSSPAGYPGPRGPAGVNGWEGEPGQHG---IPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGP---------PGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPG--------SAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGT------PGAQGLNGVPGFPGFPGNLVVLPN 323
V + P P G PG +G G+ G G PG G IPG+ G G PG PG G G NG+PG G PGP PGLPGQ G G G G G G +G G PG G GL G G+ G GP G +G PG G G G G G G G PG PG G SG PGQ G+ G PG+PG G G G +G G G G+ G DG GQ G G GA G+PG GP G+AG G G GLPG G+ G G KG G PG PG PG +G G+PG PG PG + P
Sbjct: 958 VAGAKGEAGLPGLP-GAPGQKGEQGLAGLPGIPGMKGAPGIPGAPGQDGLPGLPGVKGDRGFNGLPGEKGEPGPAARDGEKGEPGLPGQPGLRGPQGPPGLPGLPGLKGDEGQPGYGAPGLMGEKGLPGLPGKPGRPGAPGPKGLDGAPGFPGLKGEAGLPGAPGLPGQDGLPGLPGQKGESG---FPGQPGLVGPPGLPGKMGAPGIRGEKGDAGLPGLPGERGLDGLPGQKGEAGFPGAPGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGEAGLPGAPGRDGLPGLPGMKGEAGLPGLPGQPGKSITGPK 1275 HSP 4 Score: 102.449 bits (254), Expect = 5.161e-21 Identity = 125/294 (42.52%), Postives = 143/294 (48.64%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTN--------GVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGA--------------TGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGF 314
G PGPRG G G G PG+ G+PG G G G PG G PG + G+PG PG G PGLPG G PG G AG AG G G G PG+ G GL SG+ G G +GIPG GPAG G G G G PG GP+G G PG G G+PG PG G G G G G G G +G G+ G+ G PG QG G G GP+G G G+ G+ GLPG G G G KG +G PG PG PG +G G+PGFPG
Sbjct: 1226 GQPGPRGMKGEAGLPGAPGRDGLPGLPGMKGEAGLPGLPGQPGKSITGPKGNAGLPGLPGKDGLPGLPGLKGEPGKPGYAGAAGIKGEPGLPGIPGAKGEPGL------SGIPGKRGNDGIPGKP------GPAGLPGLPGMKGESGLPGPQGPAGLPGLPGLKGEPGLPGFPGQKGETGFPGQPGIPGLPGMKGDSGYPGAPGRDGAPGKQGEPGPMGPPGAQPIVQRGEKGEMGPMGAPGIRGEKGLPGLDGLPGPSGPPGFAGAKGRDGFPGQPGMPGEKGAPGLPGFPGI 1507 HSP 5 Score: 100.138 bits (248), Expect = 3.212e-20 Identity = 121/312 (38.78%), Postives = 141/312 (45.19%), Query Frame = 0
Query: 54 NGWEGEPGQHGIPGSDGNFGPPGTPGAL------------GTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPG-------------------SGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGP------------------DGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
G EG PG G+ G G+ G PG PG G PG GV G+ G G PGLPG G G G+AG G G +G G PG+ G GL G G+ G G NG+PG G GPA G G G PG PG G P G+GAPG G G+PG+PG G GA G +G +G G DG G G G++G PG G G PG PG +G G G+ G+ GLPG+ G +G G KG G PG PG PG G G G PGFPG
Sbjct: 911 KGDEGLPGLPGVSGMKGDTGLPGVPGLAGPPGQPGFPGQKGQPGFPGVAGAKGEAGLPGLPGAPGQKGEQGLAGLPGIPGMKGAPGIPGAPGQDGLP---GLPGVKGDRGFNGLPGE---KGEPGPAARDGEKGEPGLPGQPGLRGPQGPPGLPGLPGLKGDEGQP--GYGAPGLMGEKGLPGLPGKPGRPGAPGPKGLDGAPGFPGLKGEAGLPGAPGLPGQDGLPGLPGQKGESGFPGQPGLVGPPGLPGKMGAPGIRGEKGDAGLPGLPGERGLDGLPGQKGEAGFPGAPGLPGPVGPKGSAGAPGFPG 1214 HSP 6 Score: 90.5077 bits (223), Expect = 2.454e-17 Identity = 120/297 (40.40%), Postives = 143/297 (48.15%), Query Frame = 0
Query: 53 VNGWEGEPGQHGIPGSDGNFGPPGTPGA---LGTPGTNGVPGSPGP---PGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAG------------PNGRNGIPGSSGPNGPVG----PAGP--AGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGV------------PGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPG 313
+ G +G PG G+PG +G G PG PG +G PG G PG PG PG PGLPG+ G G G G G G +G G PG G SG+ G G G+ G G+ G PG +G G G P P G G G PG PG G G GAPGQ G+ G+PGV G G G G +G+ GP DG+ G+ G GQ G+ PG +G G PG G G + G+ GLPG+PGR G G KG +G PG PG G GL G PG PG
Sbjct: 835 LKGKDGIPGAPGLPGLEGQRGLPGVPGQKGEIGLPGLAGAPGFPGAKGEPGLPGLPGKEGPQGPPGQPGAPGFPGQKGDEGLPGLPGVSGMKGDTGLPGVPGLAGPPGQPGFPGQKGQPGFPGVAGAKGEAGLPGLPGAPGQKGEQGLAGLPGIPGMKGAPGIPGAPGQDGLPGLPGVKGDRGFNGLPGEKGEPGPAARDGEKGEPGLPGQPGLRGPQGPPGLPGLPGLKGDEGQPGY-------GAPGLMGEKGLPGLPGKPGRPGAPGPKGLDGAPGFPGLKGEAGLPGAPGLPG 1124 HSP 7 Score: 84.7297 bits (208), Expect = 1.523e-15 Identity = 117/314 (37.26%), Postives = 136/314 (43.31%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPG------QAGTPGSHGVAGTAGSFG--------------TRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAG------------------------TSGSVGTPGNPGSGGPSGGFGAPGQAGVAGV---------PGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQ 303
G PGP+G AG G G G G+PG G G PG PGA G G G+PG G G PGLPG +AG PG G+ G G G +G G PG+ G GL G G G+ G G G+PG +G G G G G G G PG PG G G G PG G+AG G PG G GA G G G G G+ G+ G AG G+PG +GA G+PG+PG G G G G GLPG+ G G G G PG PG PG +
Sbjct: 736 GLPGPKGEAGFPGAPGLQGPAGLPGLPGMKGNPGLPGAPGLAGLPGIPGEKGIAGKPGLPGLTGAKGEAGYPGQPGLPGPKGEPGPSTTGPPGPPGFPGLKGKDGIPGAPGLPGLEGQRGLPGVPGQKGEIGLPGLAGAPGFPGAKGEPGLPGLPGKEGPQGPPGQPGAPGFPGQKGDEGLPGLPGVSGMKGDTGLPGVPGLAGPPGQPGFPGQKGQPGFPGVAGAKGEAGLPGLPGAPGQKGEQGLAGLPGIPGMKGAPGIPGAPGQDGLPGLPGVKGDRGFNGLPGEKGEPGPAARDGEKGEPGLPGQPGLR 1049 HSP 8 Score: 82.8037 bits (203), Expect = 6.340e-15 Identity = 123/330 (37.27%), Postives = 146/330 (44.24%), Query Frame = 0
Query: 58 GEPGQHGIPGSDGN---------------FGPPGTPGAL--GTPGTNGVPGSPGP------PGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGP--------------AGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHD---------------GKAGQDGSAGQAGVPGPQGATGVPGSPGPL---------------GTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPP---GTPGTPGAQGLNGVPGFPGFPGN 317
G+PG G+PG G+ GPP L G PG +G+PG PGP PG PGL G AG PG G+ G G G G +G PG G G++G G GL G G G PG G GP G GP G G G PG PG G G G PGQ G G+PG+ G G GA G G G G + G+ G +G G GV G +G TG+PG PG G G AG + G+ GLPG PG+ G+ G G G P G PG PGA G +G+PG PG G+
Sbjct: 686 GQPGMPGLPGMKGDAGLPGLPGLPGAVGPMGPPVPESQLRPGPPGKDGLPGLPGPKGEAGFPGAPGLQGPAGLPGLPGMKGNPGLPGAPGLAGLPGIPGEKGIAGKPGLPGLTGAKGEAGYPGQPGLPGPKGEPGPSTTGPPGPPGFPGLKGKDGIPGAPGLPGLEGQRGLPGVPGQKGEIGLPGLAGAPGFPGAKGEPGLPGLPGKEGPQGPPGQPGAPGFPGQKGDEGLPGLPGVSGMKGDTGLPGVPGLAGPPGQPGFPGQKGQPGFPGVAGAKGEAGLPGLPGAPGQKGEQGLAGLPGIPGMKGAPGIPGAPGQDGLPGLPGVKGD 1015 HSP 9 Score: 79.337 bits (194), Expect = 7.216e-14 Identity = 121/321 (37.69%), Postives = 148/321 (46.11%), Query Frame = 0
Query: 55 GWEGEPGQHGIPGSDGNFGPPGTPGALGTPG------------TNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVG----QSGLA-GPNGRNGIPGSSGPNGPV---------GPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGK-----------------AGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGG------------------KGPNGPPGTPGTPGAQGLNGVPGFPGF 314
G+ G+ G+ G PG G G PG PG +G PG G+P PG G PGLPG G PG +G G G G +G +G PG G G GP+G +S L GP G++G+PG GP G GPAG G G G PG PG+ G +G G PG+ G+AG PG+PG G G +G GQ G G G+ G+DG G G+PG +G G+PG PG G G G A G G G+PG G G KG G PG PG G +G G+PG PG
Sbjct: 618 GYPGQKGETGFPGPRGQEGLPGKPGIVGAPGLPGPPGPKGEPGLTGLPEKPGKDGIPGLPGLKGEPG-YGQPGMPGLPGMKGDAGLPGLPGLPGAVGPMGPPVPESQLRPGPPGKDGLPGLPGPKGEAGFPGAPGLQGPAGLPGLPGMKGNPGLPGAPGLAGLPGIPGEKGIAGKPGLPGLTGAKGEAGYPGQPGLPGPKGEPGPSTTGPPGPPGFPGLKGKDGIPGAPGLPGLEGQRGLPGVPGQKGEIGLPGLAGAPGFPGAKGEPGLPGLPGKEGPQGPPGQPGAPGFPGQKGDEGLPGLPGVSGMKGDTGLPGVPGL 937 HSP 10 Score: 69.707 bits (169), Expect = 6.878e-11 Identity = 89/215 (41.40%), Postives = 102/215 (47.44%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPG 256
AG G G G+ G +GEPG GIPG GN G PG PG G PG G+ G G PGP G G G PG G G G G +G +G PG G GL G G SG G GR+G PG P P P G G+ G G PG+ G G G G G +GP G G G+DG GQ G+PG +GA G+PG PG
Sbjct: 1308 AGIKGEPGLPGIPGAKGEPGLSGIPGKRGNDGIPGKPGPAGLPGLPGMKGESGLPGPQGPAGLPGLPGLKGEPGLPGFPGQKGETGFPGQPGIPGLPGMKGDSGYPGAPGRDGAPGKQ----------------GEPGPMGPPGAQPIVQRGEKGEMGPMGAPGIRGEKGLPGLDGLPGPSGPPGFAGAKGRDGFPGQPGMPGEKGAPGLPGFPG 1506
BLAST of collagen alpha-1 chain-like vs. SwissProt
Match: gi|143811378|sp|P05997.3|CO5A2_HUMAN (RecName: Full=Collagen alpha-2(V) chain; Flags: Precursor) HSP 1 Score: 114.775 bits (286), Expect = 8.514e-25 Identity = 124/311 (39.87%), Postives = 144/311 (46.30%), Query Frame = 0
Query: 52 GVNGWEGEPGQHGIPGSDGNFGPPGTP------GALGTPGTNGV------PGSPGPPGP---PGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQD------GSAGQAGVPGP---------------------QGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
G G G+PG G+PG G GP G P G +G PG G PG+ GPPGP G PG G PGS G+ G G+ G RGP G+ G G G G G+ GL G G G PG GP G +GP G G G G PG+ G G G G PG G +G PG PG G G G +G G DG G +G G G+ G PGP QG G PG+ GPLG G G + G G+ G PG G GG GP+GP G+PG G G G PG G PG +
Sbjct: 459 GPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGI 769 HSP 2 Score: 104.375 bits (259), Expect = 1.514e-21 Identity = 123/323 (38.08%), Postives = 145/323 (44.89%), Query Frame = 0
Query: 49 GPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPS---------------------------GTPGSAGGSGLSG------------------PVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGG---FGAPGQAGVAGVP---GVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
GP G G G G G+PG G GP G PG G +G+PG PGP GP G+PG +G PG+ G+ G AG G RGP GTPG+ G +G G G G+ G G G+PG G GP G GP G G +G PG G GP G G PG G G P G PG+ G G G+QG+ GP G G G G G+ G PG GA G+ G+PG G G G G PG+ GR G G G G PG+ G PG +G +G PG PG GN V
Sbjct: 324 GPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGA---HGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPL------GAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637 HSP 3 Score: 102.064 bits (253), Expect = 6.097e-21 Identity = 124/324 (38.27%), Postives = 145/324 (44.75%), Query Frame = 0
Query: 36 ACPSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGA---LGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHG------------------VAGTAGSFGTRGPSGTPGS------------------AGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGK---GPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
A P+ P G GP GP G+ G G G G PG G G PG PG LG PG++G PG+PG G G G G G G GT G+ G +GP+G+PG+ G G+ G G G+ G G G G GP+G GP GP G G G G+PG+ GP G G G G G PG G G GA G +G G G G G G G+ G+PG +G TG PG GP G G G ++G G PG G G G GP G G PG PG G GVPG G PG
Sbjct: 323 AGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGK 646 HSP 4 Score: 90.5077 bits (223), Expect = 2.279e-17 Identity = 117/269 (43.49%), Postives = 131/269 (48.70%), Query Frame = 0
Query: 64 GIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPG---------------VPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PG +GN PG G G+PG G PG+PG PG G G G G G G GS G GP+G G+ G G G G+ G GP G G G+ G G GP GP G GS G PGNPG G +G GA G G G G GT GT GA G G G G G AG GS G G GPQG G PG PG G G AG + G G+ G G G++G +GP G PGT G PG G G PG GFPG+
Sbjct: 267 GEPGRNGN---PGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPVGERGAPGNRGFPGS 532 HSP 5 Score: 89.7373 bits (221), Expect = 4.521e-17 Identity = 127/361 (35.18%), Postives = 147/361 (40.72%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGP---------------------PGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGT---PGSAGGSGLSGPVGQSGLAGPNGRNGIPGS---------------SGPNGPVGPAGPAGTSG---------------SVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIG------------------------------GLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
P G PG GP G G G PG G PGSDG GP PG PG G PG G+ G+PG GP G G G PG G G GS G RG G+ PG G SG G G++G AG G+ G PG +G G GP GP G G G PG+PG+ GP G G G G G PG+ G G G +G G +GP G G +G G G G+ G G G+ G+PGP G G G+ G GL G PG G+ G +G NGP G G G QG +G PG G PG
Sbjct: 505 PRGDPGTVGPPGPVGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGSQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE 865 HSP 6 Score: 87.8113 bits (216), Expect = 1.704e-16 Identity = 128/358 (35.75%), Postives = 143/358 (39.94%), Query Frame = 0
Query: 43 GYPGPRGPAG---VNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPG---SPGPPGPPGLPGQAGTPGSHGVAGT---------------AGSFGTRGP------------------------SGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASG------------------------------------------------SQGQNGPDGHDGKAGQDGSAGQAGV---PGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQG 304
G PG RG G V G EG+ G G PG DG GPPG+ G G PG+ G+PG S G PG PG G AG PG G G AG G +GP G PG G G GP G+ G G G GI G G G G GP G GS G G PG GP G G PG+ G+AG PG G G +G G S+G+NGP G G AG G GQ GV PG G G GSPGP G AG+ G NG+ GL GG+G GPPG G PG+ G
Sbjct: 567 GLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGL---------KGGRGTQGPPGATGFPGSAG 915 HSP 7 Score: 85.1149 bits (209), Expect = 1.128e-15 Identity = 90/210 (42.86%), Postives = 101/210 (48.10%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGL---------------SGPVGQSGLAGPNGRNGIPGSSGPNGP---VGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSA 237
GPRG G G GEPG G+PG G G G G G+PG +G PG GPPG G+PG+ G G+ G G G G +G GT G+ G GL G G GL GP G G PGS G NGP VG AGP G G G G PG G G G+PG G+AG PG G G G G +G GP G G G G
Sbjct: 708 GPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRV 917 HSP 8 Score: 83.5741 bits (205), Expect = 3.963e-15 Identity = 124/314 (39.49%), Postives = 143/314 (45.54%), Query Frame = 0
Query: 49 GPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALG---TPGTNGVPGS---------------------PGPPGP---------PGLPGQAGTPGSHGVAGTAGS---FGTRGPSGTPGSAGGSGLSGPVGQSGLA---GPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGV------PGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
GP G G G+PG G+PG G+ G PG PG G PG G PG GPPGP PG PG+ G PG GV G G+ G RG G PG G G++G G+ G+A GP+G G PG SG G GP G G G G G PG G GG G G G AG G G G G +G +G+ GP G G G G+ G G GP GA G G GP G G G+ + G G G PG G G GP+GP G PG G +G G PG GFPG+
Sbjct: 600 GPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913 HSP 9 Score: 81.2629 bits (199), Expect = 1.737e-14 Identity = 129/356 (36.24%), Postives = 145/356 (40.73%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGR---------------NGIPGSSGPNGPVG------------------------------------PAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQ------------------------NGPDGHDGKAGQDGSAGQ---------AGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGF 314
G PGPRG G PG G PGS G GP G G G G +G PG G PG PG G AG+PG G+AG S G GP+G PG GG G GP G +G G GR G PG GP G G P GPAGT+G G G PGQ G G+PG+PG GT G G G GP G+DG G+DG+ G+ AG+PG QGA PG+PGP+G G AGQ G G G PGR G G GP GP G G G +G G G GF
Sbjct: 816 GEPGPRG------LVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAG---SPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGI------------VGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGA---PGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147 HSP 10 Score: 78.1814 bits (191), Expect = 1.457e-13 Identity = 116/277 (41.88%), Postives = 128/277 (46.21%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGP---------NGPVGPAGPAGTSGSVGTPGNPGSGGPSG--GFGAP----GQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQG 304
G PG GP G G G PG+ G PG G PG G+ G GP GP G PG +GTPG G G G G RG +GTPG G G G G G AG +G G+PG GP G GP G G GS G PG+ G GP+G GF P GQ GV G PG PG G G+ G QG G G G G G G G GP GATG PGS G +G G AG G G PG+ GPPG G PG+ G
Sbjct: 699 GDPGAVGPLGPRGERGNPGERG------------EPGITGLPGEKGMAGGHGPDGPKGSPGPSGTPGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPLGEPGK------------EGPPGLRGDPGSHG 951 HSP 11 Score: 56.6102 bits (135), Expect = 6.821e-7 Identity = 55/122 (45.08%), Postives = 61/122 (50.00%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNG 163
G PGP GPAG +G PG+ G G G+ G PG G PG+ G PG+PGP G PG GQ G PGS RGP G PG AG GL GP G G G +G G G G G
Sbjct: 1043 VGEPGPEGPAGNDGT---PGRDGAVGERGDR---GDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGS------------RGPIGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRG 1146 HSP 12 Score: 56.225 bits (134), Expect = 9.264e-7 Identity = 77/209 (36.84%), Postives = 88/209 (42.11%), Query Frame = 0
Query: 153 NGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGG---------PSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGD------------------DGGKGPNGPPGTPGTP------------------GAQGLNGVPGFPGFPG 316
+G PG +G G VG AG G G G PG PG G P G GAPG G AG G G G +G G G+ G G G GQ G+ G G PGP G G+PGS G G G G+A G G G G+ G+ DG G GP G+PGT G QG+ G PG PG PG
Sbjct: 266 DGEPGRNGNPGEVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGAPGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSPGLPGAIGTDGTPGAKGPTGSPGTSGPPGSAGPPGSPGPQGSTGPQGIRGQPGDPGVPG 474
BLAST of collagen alpha-1 chain-like vs. SwissProt
Match: gi|19855071|sp|P02466.3|CO1A2_RAT (RecName: Full=Collagen alpha-2(I) chain; AltName: Full=Alpha-2 type I collagen; Flags: Precursor) HSP 1 Score: 114.005 bits (284), Expect = 1.236e-24 Identity = 129/291 (44.33%), Postives = 149/291 (51.20%), Query Frame = 0
Query: 41 PAGYPGPRGPAGV---NGWEGEPGQHGIPGSDGNFGPPGTPGALGTPG------TNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGP------VGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
P G PGP G AG G GEPG G G GN G PG+ GA G PG G PG PG GP G PG G+PGS G+ G G G GP G GS G +G+ GP G+ GL GP G G PG+ GP G GP G G G G G G G +G G PG G +G PG PG G G +G++G GPDG++G G G G G G QG G PG G G +GTAG+ + G GLPG+ G G G +G GPPG G G G G+ G G PG
Sbjct: 332 PRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAGNIGFPGPKGPSGDPGKPGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGIRGPSGAPG 622 HSP 2 Score: 103.99 bits (258), Expect = 1.688e-21 Identity = 129/306 (42.16%), Postives = 155/306 (50.65%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPP---------GTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGT---------SGSVGTPGNPGS------GGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGK------AGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
P G PGP GPAG G + G+PG G GPP G GA G PG G PG PGP G PG G AG G G+ G G G++G +G G G +G GP G SG G G G PGS+GP GP G G G+ +G +G PGN GS GP+G G PG+ G+ G G+PG+ G +G +G +G G G DG+ AG G AG G PGP+G +G PG PG G G AG G PG +G++G +GP GP G G G QG G PGF G PG
Sbjct: 275 PVGNPGPAGPAGPRG------EAGLPGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAGNIGFPGPKGPSGDPGKPGEKGHPGLAGAR---------GAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPG 565 HSP 3 Score: 103.99 bits (258), Expect = 1.904e-21 Identity = 136/341 (39.88%), Postives = 155/341 (45.45%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTS---------------GSVGTPGNPGSGGPSGGFGAPGQA------------------------GVAGVPGVPGTGGTMGASGSQGQNGP------------DGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTA---------------GQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPG 313
+ PAG GP GP G G +G PG+ G PG G GP G A G PGT G+PG G G GL G G PG+ GV G G+ G +GTPG AG GL G G+ G GP G G S G GPVGPAGP G++ G VG PG G GP G G PG + GVAG PG+PG G G G+ G GP G G G+ GSAG G PGP G G GSPG G+AG A G + G+ G PG G G G +GPNG G PG PG G G+PG PG
Sbjct: 132 TGPAGSRGPAGPPGKAGEDGHPGKPGRPGERGVVGPQG---ARGFPGTPGLPGFKGIRGHNGLDGLKGQPGAQGVKGEPGAPGE---NGTPGQAGARGLPGERGRVGAPGPAGARG---SDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEAGLPGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPG 463 HSP 4 Score: 101.679 bits (252), Expect = 8.656e-21 Identity = 119/275 (43.27%), Postives = 139/275 (50.55%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PG G G G GE G+ G PG G+ GP G PG G+PG+ G+PG+ G G G PG G+ G GV G G G G PG G GL G G G AG G G+PG G GP+GPAGP G +G++G P GP G G PG+ G G PG+ G G G G+ G GP G G G G G AG PG QG PGP GTAG G+ + G+ G G PG G G +GP G G G G G+ G G PG GN
Sbjct: 367 GEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGVRGPNGDAGR---PGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAGNIGFP------GPKGPSGDPGKPGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGL------PGPSGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGIRGPSGAPGPDGN 626 HSP 5 Score: 101.679 bits (252), Expect = 8.806e-21 Identity = 129/320 (40.31%), Postives = 154/320 (48.12%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTN------------GVPGSPGPPGPPGLPGQAGTPG------------SHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVG------------PAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLP---------GQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G G RG G G G PG G GSDG+ GP G G +G+ G G G+PGP GP G G+AG PG ++G+ G G+ G G +G PG G G+ GPVG +G GP G G PG +G G G P GP+G G G+PG PGS GP+G G G G G+PG G G MG G++G GP G G +G AG+ G PG G G+PGSPG +G AG G GI G P G+ G G G KGP+G PG PG G GL G G PG GN
Sbjct: 217 GQAGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEAGLPGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPPGPSGEEGKRGSPGEPGSAGPAGPPGLRGSPGSRGLPGADGRAGVMGPPGNRGSTGPAGVRGP---NGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAGNIGFPGPKGPSGDPGKPGEKGHPGLAGARGAPGPDGN 533 HSP 6 Score: 99.3673 bits (246), Expect = 4.032e-20 Identity = 129/329 (39.21%), Postives = 152/329 (46.20%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGP------AGPAGTSGSVGTPGN---------PGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQ---------------DGSAGQAGVP---------------------GPQGATGVPGSPGPLGTA---GTAGQAAQNGIGGLPGQPGRNGDDGGKGPN---GPPGTPGTPGAQGLNGVPG 310
+ PAG GP G AG G G G G+PGS GN GP G G +G PG +G PG GP GP G G G PG G +G G G + G PG AG G GP G +G GP G G+ G G GP GP GP+GT+G VG PG PG GP G G PG++G A G G +G G G GPDG+ G+AG G G AG+P G +GA G G+PGP G + G AG A +G G G PG G+ G GPN GP G+ G PGA+G G G
Sbjct: 432 TGPAGVRGPNGDAGRPGEPGLMGPRGLPGSPGNVGPAGKEGPVGLPGIDGRPGPIGPAGPRGEAGNIGFPGPKGPSGDPGKPGEK---GHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAA------GPSGPIGIRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGAPGAIGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGSAGQPGAKGEKGTKG 751 HSP 7 Score: 94.7449 bits (234), Expect = 1.328e-18 Identity = 120/268 (44.78%), Postives = 136/268 (50.75%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRG---PSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVP---------------GVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNG 292
G+PGP+GP+G G GE G G+ G+ G GP G GA G PG GV G G GP G PG G PG G AG G G RG G PG AG G GP G+SG AGP+G GI GP G GP G G G G PGS G SG G PG+ G AG+P G PG G GA G+ G GP G G G+ G+AG +G GP+G+ G G GP G G AG A G GQPG G+ G KGP G
Sbjct: 499 GFPGPKGPSGDPGKPGEKGHPGLAGARGAPGPDGNNGAQGPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGI------RGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGAPGAIGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPA------GSAGQPGAKGEKGTKGPKG 754 HSP 8 Score: 87.8113 bits (216), Expect = 1.557e-16 Identity = 104/230 (45.22%), Postives = 121/230 (52.61%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNG---PVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGI 272
GP GP GV G +GE G G PG G GP GT G +G PG G+PG G PGP G G+ G PG G AG +G G RGPSG PG G G +G VG G AG +G G+PG G G G G G G +G PG G+ G G GAPG AG + G G GA+G G GP G G+ G+ G AG G GP G+ G PG+ G GT G +NGI
Sbjct: 538 GPPGPQGVQGGKGEQGPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGIRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGAPGAIGAPGPAGAS------GDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGSAGQPGA---KGEKGTKGPKGENGI 758 HSP 9 Score: 82.0333 bits (201), Expect = 9.623e-15 Identity = 115/274 (41.97%), Postives = 126/274 (45.99%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
G GPRG G G GE G G PG G GP G PG G PGT G G G PG GLPG G G G+AG G G G +G PG+ G G G G +G G GR+G PGS GP PG G G G G PG G G G PG G++G +G G G G G G G+ G G GPQG G G PG G G G NG+ GLPG G +GD G GP GP G G G G G G G PG
Sbjct: 823 GIRGPRGDQGPVGRTGEIGASGPPGFAGEKGPSGEPGTTGPPGTAGPQGLLGAPGILGLPGSRGERGQPGIAGALGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGP------------------PGRDGQPGHKGERGYPGNIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGDKGARGLPGLKGHNGLQGLPGLAGLHGDQGAPGPVGPAGPRGPAGPSGPIGKDGRSGHPG 1078 HSP 10 Score: 77.411 bits (189), Expect = 3.143e-13 Identity = 126/335 (37.61%), Postives = 150/335 (44.78%), Query Frame = 0
Query: 25 GRKVEQVASQCACPSSPAGYPGPRG---PAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSP------------------GPPGPPGLPGQAGT---------PGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVP------------GVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G + E A+ + P+ P G PG RG PAG NG+ G G G PG+ G G G G G G G G+ GPPG G PG AG G G G AG G RGP G G G +G G G G AG G +G PG++GP G GP G G G +G PG+ G G G GA G+ G G+ G PG G G +G G G DG G+ GQ G G+ G PG G TG G+PGP G+ G AG+ G G G G G G +GP+GP G G G G G G PG G+
Sbjct: 697 GDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGSAGQPGAKGEKGTKGPKGENGIVGPTGPVGAAGPSGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGIRGPRGDQGPVGRTGEIGASGPPGFAGEKGPSGEPGTTGPPGTAGPQGLLGAPGILGLPGSRGERGQPGIAGALGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGNIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGDKGEPGDKGARGLPGLKGH 1031 HSP 11 Score: 76.6406 bits (187), Expect = 5.113e-13 Identity = 121/307 (39.41%), Postives = 137/307 (44.63%), Query Frame = 0
Query: 49 GPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQ------------GQNGPDGHDGKAGQDGSAGQAGVP------------------GPQGATGVPGS------PGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGT------PGTPGAQGLNGVPGFPG 313
GP G+ G G PG G PG G GP G PG PG G GS GP GPPG G+ G PG G G G G +G G PG+ G G G G +GL +G G PG+ G G G G GT G G G PG G GAPG AG G G G G G GS G+ GP G+ G AG G G+AG+P G +GATG+PG PGP G G G A G GL G+PG G G G G PG+ PG G +G G PG PG
Sbjct: 97 GPMGLMGPRGPPGAVGAPGPQGFQGPAGEPG---EPGQTGPAGSRGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRGHNGL---DGLKGQPGAQGVKGEPGAPGENGTPGQAGARGLPGE---RGRVGAPGPAGARGSDGSVGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEAGLPGLSGPVGPPGNPGANGLTGAKGATGLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPPGPSGEEGKRGSPGEPG 394 HSP 12 Score: 72.7886 bits (177), Expect = 7.457e-12 Identity = 108/271 (39.85%), Postives = 122/271 (45.02%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVP------------GSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGS---AGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGP 293
PS G GP G AG G G PG G+PGS G G PG GALG PG G+ GSPG G PG G+ G PGS G G G G +G G PG+ G +G GP G G AG +G G PG +G GPVG GP G SG G G+ G PG G G+PG+ G G G G G +G G G G G G AG GP G G G PGP+G AG G G +GP GP
Sbjct: 854 PSGEPGTTGPPGTAGPQGLLGAPGILGLPGSRGERGQPGIAGALGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGERGYPGNIGPTGAAGAPGPHGSVGPAGKHGNRGEPGPAGSVGPVGAVGPRGPSGPQGIRGD---------KGEPGDKGARGLPGLKGHNGLQGLPGLAGLHGDQGAPGPVGPAGPRGPAGPSGPIGKDGRSGHPGPVGPAGV------------------RGSQGSQGPAGP 1097 HSP 13 Score: 72.4034 bits (176), Expect = 1.049e-11 Identity = 128/359 (35.65%), Postives = 151/359 (42.06%), Query Frame = 0
Query: 33 SQCACPSSPAGYPGPRGPAGVNGWEGEPGQ------------HGIPGSDGNFGPPGTP---------GALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGS------AGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNP------GSGGPSGGFGAPGQAGVA---------------------GVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQ---------------------------PGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPG 310
S A PS P G GP G G +G +GE G G+PG G G PG G +G PG +G G+ PG G PG AG G G AG AG G GP G+PG AG +G +GP G +G G G G G G NG VGP GP G +G G G P G GGP G G PG AG G+ G G G +G +G G +GP G G+ G G G G PG G G+ G+PG LG G+ G+ Q GI G G+ PG G DG G +GPPG G PG +G G PG
Sbjct: 603 SGAAGPSGPIGIRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGA---PGAIGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGSAGQPGAKGEKGTKGPKGENGIVGPTGPVGAAGPSGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGIRGPRGDQGPVGRTGEIGASGPPGFAGEKGPSGEPGTTGPPGTAGPQGLLGAPGILGLPGSRGERGQPGIAGALGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGSDGPPGRDGQPGHKGERGYPG 958 HSP 14 Score: 70.0922 bits (170), Expect = 5.535e-11 Identity = 134/396 (33.84%), Postives = 161/396 (40.66%), Query Frame = 0
Query: 24 QGRKVEQVASQCACPSSPAGYPGPRGPAGVNGWEGEPGQHGIPGS---------DGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGT---------------PGSHGVAG------------------TAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGV------------------------PGTGGTMGASG---------------------SQGQNGPDGHDGKAGQDGSAGQAGVPG---PQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTP------------GAQGLNGVPGFPGFPGN 317
QG K EQ P+ P G+ G GP+G G G+PG+ G+PG G GPPG GA G G G+ G G PGP G G+AG PG G AG G G RG G G+ G +G SG G++G AGP+G G GS G G VGPAGP G +G G+ G PG+ G G G G+ G+ G G PG G GA+G +G GP G G G+ G G +G PG +G +G PG+ GP GTAG G GI GLPG G G G G G PG G G+ G+NG PG G GN
Sbjct: 546 QGGKGEQ------GPAGPPGFQGLPGPSGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGAAGPSGPIGIRGPSGAPGPDGNKGEAGAVGAPGSAGASGPGGLPGERGAAGIPGGKGEKGETGLRGEIGNPGRDGARGAPGAIGAPGPAGASGDRGEAGAAGPSGPAGPRGSPGERGEVGPAGPNGFAGPAGSAGQPGAKGEKGTKGPKGENGIVGPTGPVGAAGPSGPNGPPGPAGSRGDGGPPGMTGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGIRGPRGDQGPVGRTGEIGASGPPGFAGEKGPSGEPGTTGPPGTAGPQGLLGAPGILGLPGSRGERGQPGIAGALGEPGPLGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGN 935 HSP 15 Score: 65.4698 bits (158), Expect = 1.232e-9 Identity = 77/188 (40.96%), Postives = 86/188 (45.74%), Query Frame = 0
Query: 111 HGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQA---AQNGIGGLPGQPGRNGDDGGKGPNGPPG 295
GV+ G G GP G PG+ G G G GP G G PG +GP G GPAGP G +G G PG PG G G G G G G PG+PG G +G NG DG G+ PG QG G PG+PG GT G AG + G G PG G G DG GP GP G
Sbjct: 90 KGVSAGPGPMGLMGPRGPPGAVGAPG------PQGFQGPAGEPGEPGQTGPAGSRGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGF------KGIRGHNGLDGLKGQ------------PGAQGVKGEPGAPGENGTPGQAGARGLPGERGRVGAPGPAGARGSDGSVGPVGPAG 253 HSP 16 Score: 63.1586 bits (152), Expect = 6.111e-9 Identity = 70/148 (47.30%), Postives = 77/148 (52.03%), Query Frame = 0
Query: 169 GPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
GP G G G PG G+ GP GF P AG PG PG G G+ G G G G DG G+ G G+ GV GPQGA G PG+PG G G G NG+ GL GQPG G G G G GTPG GA+GL G G G PG
Sbjct: 97 GPMGLMGPRGPPGAVGAPGPQ-GFQGP-----AGEPGEPGQTGPAGSRGPAGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIRG---HNGLDGLKGQPGAQGVKGEPGAPGENGTPGQAGARGLPGERGRVGAPG 235
BLAST of collagen alpha-1 chain-like vs. SwissProt
Match: gi|189082903|sp|Q8C6K9.2|CO6A6_MOUSE (RecName: Full=Collagen alpha-6(VI) chain; Flags: Precursor) HSP 1 Score: 114.005 bits (284), Expect = 1.563e-24 Identity = 115/291 (39.52%), Postives = 129/291 (44.33%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGAL------------GTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGS------------SGPNGPVGPAGPAGT---SGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPG--PLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQG 304
GY G G AG G G G+ G G G GP GT G G G G G PG G G G G PG G AG G+ G RG GTPG S + GP G G G GR G PGS G G +GP G GT G G+PG G GP G G G+ G G+ G G G G +GSQG G G+ G+ G G G AG PGP+G G GSPG +G GT GQ G PG+ G GD G G PG G GA+G
Sbjct: 1415 GYLGEEGIAGERGASGPMGEQGTKGCFGAKGPKGTRGLSGEEGEVGEDGLDGLDGEQGDHGIPGRRGEKGDEGSQGNPGRRGAAGDRGAKGLRGDPGTPGR--DSSIQGPKGLKGDLGRQGRRGWPGSPGTPGSRRKMVVHGRRGHIGPQGNPGTPGPDGLAGSPGLRGPQGPRGEVGEKGEKGSLGMKGPQGPPGPGGQAGSQGHLGSQGNKGEPGDLGEKGAAGFPGPRGLQGDDGSPGYGSIGRKGTKGQE------GFPGESGLKGDIGDPGD---PGEAGPKGARG 1694 HSP 2 Score: 110.538 bits (275), Expect = 2.002e-23 Identity = 104/267 (38.95%), Postives = 118/267 (44.19%), Query Frame = 0
Query: 67 GSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGG---------SGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGS-------GGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQ---GATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGF 314
G DG G PG+ G G PG GS G G G+ G+ G G G GT G FG +GP GT G +G GL G G G+ G G G GS G G G AG G G G PG PG G G G G+ G G PG PG+ M G +G GP G+ G G DG AG G+ GPQ G G G G LG G G G G G G G+ G G G G G PG +GL G G PG+
Sbjct: 1391 GGDGAMGDPGSAGKKGPPG---FKGSDGYLGEEGIAGERGASGPMGEQGTKGCFGAKGPKGTRGLSGEEGEVGEDGLDGLDGEQGDHGIPGRRGEKGDEGSQGNPGRRGAAGDRGAKGLRGDPGTPGRDSSIQGPKGLKGDLGRQGRRGWPGSPGTPGSRRKMVVHGRRGHIGPQGNPGTPGPDGLAGSPGLRGPQGPRGEVGEKGEKGSLGMKGPQGPPGPGGQAGSQGHLGSQGNKGEPGDLGEKGAAGFPGPRGLQGDDGSPGY 1654 HSP 3 Score: 95.5153 bits (236), Expect = 7.416e-19 Identity = 97/245 (39.59%), Postives = 115/245 (46.94%), Query Frame = 0
Query: 53 VNGWEGEPGQHGIPGS------DGNFGPPGTPGALGTPGTNGVPGSPGPPG-------PPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGK-----AGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQP 279
++G +GE G HGIPG +G+ G PG GA G G G+ G PG PG P GL G G G G G+ G+ G+R G G G P G G GP+G G PG GP GP G G G GS+G G G GP G G+ G G G G PG G GA+G G G G DG G+ G+ GQ G PG G G G PG G AG G + G+PG+P
Sbjct: 1464 LDGLDGEQGDHGIPGRRGEKGDEGSQGNPGRRGAAGDRGAKGLRGDPGTPGRDSSIQGPKGLKGDLGRQGRRGWPGSPGTPGSRRKMVVHGRRGHIG---PQGNPGTPGPDGLAGSPGLRGPQGPRGEVGEKGEKGSLGMKGPQGPPGPGGQAGSQGHLGSQGNKGEPGDLGEKGAAGFPGPRGLQGDDGSPGYGSIGRKGTKGQEGFPGESGLKGDIGDPGDPGEAGPKGARGKTVSAGIPGEP 1705 HSP 4 Score: 93.5893 bits (231), Expect = 3.342e-18 Identity = 93/215 (43.26%), Postives = 105/215 (48.84%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNF-GPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPG 256
G PG RG AG G +G G G PG D + GP G G LG G G PGS PG PG + G G G G+ GT GP G GS G G GP G+ G G G G+ G GP GP G AG G GS G G PG G G G PG G+ G G PG G++G G++GQ G G G G G G G GP+GA G S G
Sbjct: 1490 GNPGRRGAAGDRGAKGLRGDPGTPGRDSSIQGPKGLKGDLGRQGRRGWPGS---PGTPGSRRKMVVHGRRGHIGPQGNPGTPGPDGLAGSPGLRGPQGPRGEVGEKGEKGSLGMKGPQGPPGPGGQAGSQGHLGSQGNKGEPGDLGEKGAAGFPGPRGLQGDDGSPGY-GSIGRKGTKGQEGFPGESGLKGDIGDPGDPGEAGPKGARGKTVSAG 1700 HSP 5 Score: 71.633 bits (174), Expect = 2.105e-11 Identity = 74/196 (37.76%), Postives = 86/196 (43.88%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEGEPG------QHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGK 230
P G G G G GW G PG + + G G+ GP G PG TPG +G+ GSPG GP G G+ G G GS G +GP G PG G +G G + G G G PG G G G GP G G G+PG G G G G G PG G G +G G G+ GP G GK
Sbjct: 1522 PKGLKGDLGRQGRRGWPGSPGTPGSRRKMVVHGRRGHIGPQGNPG---TPGPDGLAGSPGLRGPQGPRGEVGEKGE------KGSLGMKGPQGPPGPGGQAGSQGHL------GSQGNKGEPGDLGEKGAAGFPGPRGLQGDDGSPG-------YGSIGRKGTKGQEGFPGESGLKGDIGDPGDPGEAGPKGARGK 1695 HSP 6 Score: 70.4774 bits (171), Expect = 4.376e-11 Identity = 71/173 (41.04%), Postives = 83/173 (47.98%), Query Frame = 0
Query: 148 GPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
G +G G PGS+G GP G G G G G G G+ GP G + G G G G GT G SG +G+ G DG DG DG G G+PG +G G GS G G G AG G+ G PG PGR D +GP G G G G +G G PG PG +VV
Sbjct: 1391 GGDGAMGDPGSAGKKGPPGFKGSDGYLGEEGIAGERGASGPMG------EQGTKGCFGAKGPKGTRGLSGEEGEVGEDGLDG---LDGEQGDHGIPGRRGEKGDEGSQGNPGRRGAAGDRGAKGLRGDPGTPGR--DSSIQGPKGLKGDLGRQGRRGWPGSPGTPGSRRKMVV 1552 HSP 7 Score: 59.3066 bits (142), Expect = 1.214e-7 Identity = 68/176 (38.64%), Postives = 79/176 (44.89%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSD------------GNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVA 201
P AG PG RGP G G GE G+ G G G+ G G+ G G PG G G+ G PGP GL G G+PG G+ G GT+G G PG +SGL G G G PG +GP G G AG G G+PG PG G G GA G A +
Sbjct: 1570 PDGLAGSPGLRGPQGPRGEVGEKGEKGSLGMKGPQGPPGPGGQAGSQGHLGSQGNKGEPGDLGEKGAAGFPGPRGLQGDDGSPG----YGSIGRKGTKGQEGFPG------------ESGLKGDIGDPGDPGEAGPKGARGKTVSAGIPGEPGSPGEPGPPGRKGVKGARGLASFS 1729
BLAST of collagen alpha-1 chain-like vs. SwissProt
Match: gi|584868|sp|P17140.2|CO4A2_CAEEL (RecName: Full=Collagen alpha-2(IV) chain; AltName: Full=Lethal protein 2; Flags: Precursor) HSP 1 Score: 113.62 bits (283), Expect = 1.811e-24 Identity = 128/316 (40.51%), Postives = 150/316 (47.47%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSD---------GNFGPPGTPGA------LGTPGTNGVPGSPGPPGPPGLPGQAGTP---------------------GSHGVAGTAGSFGTR------------GPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPG 310
GYPG +G AG+ G G G G PG D G G PG PG LG PG +G PG PG PG PG+ G AG P G GV G G+ G + G SG PG G G +G G+ G AGP R+G G +G G G GP G SG G PG G G G+G PGQ G G+PG+PG G GA GS GQ+G G G G+ G GQ G+PG G GVPG G LG +G G + G+ G PG PG GD G G PG PG +G++G PG
Sbjct: 874 GYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNGPKGEPGVPGMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLPGEKGEAGPAARDGQKGDAGLPGQPGLRGPQGPSGLPGVPGFKGETGLP-GYGQPGQPGEKGLPGIPGKAGRQGAPGSPGQDGLPGFPGMKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQG------GLPGIPGDRGMDGYPG 1182 HSP 2 Score: 103.219 bits (256), Expect = 2.851e-21 Identity = 130/312 (41.67%), Postives = 146/312 (46.79%), Query Frame = 0
Query: 54 NGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPG------SSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNG---------------PDGHDGKAGQDGSAGQ---------------AGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGF--PGFPGN--LVVLPNKV 325
G+ G PG GIPG G+ G PG PG G G GV G PG PG PG PG G G G+ GT G G RG G PG GG GL G GQ G G G G+PG S G G G G G G G PG PG G G GAPGQ+G G+PG PG G G +G G G P G G G G+ G +GVPG +G G G PG G AG A + Q G GLPGQPG +GP GP G PG PG +G G+PG+ PG PG L +P K
Sbjct: 784 KGFGGVPGLPGIPGPKGDVGNPGLPGLNGQKGEPGV-GVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPGFKGDGGLPGLPGLNGPKGEPGVPGMPGTPGMKGNGGLPGLPGRDGLSGVPGMKGDRGFNGLPGEKGEAGPAARDGQKGDAGLPGQPGL------RGPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGIPGKA 1088 HSP 3 Score: 103.219 bits (256), Expect = 2.900e-21 Identity = 128/318 (40.25%), Postives = 147/318 (46.23%), Query Frame = 0
Query: 48 RGPAGVNGWEGEPGQHGIPGSDGN-----FGPPGTPGALG------------TPGTNGVPG--------SPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGS------------------GLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTM------GASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
+G AG+ G G+PGQ G+PG GN +G PG PG G TPG G+PG +P PPG PGLPG GT G G G G G G G PG G S G G G G+ GP G G PG G NG G G VG PG PGS G PG G AG+PG+PGT G GA G +G +G G G+ G G G AG+PG G G PG PG G G G ++G+ GLPG G GD G G +G PG PG PG G+ G G PG PG
Sbjct: 654 KGDAGLPGLSGKPGQDGLPGLPGNKGEAGYGQPGQPGFPGAKGDGGLPGLPGTPGLQGMPGEPAPENQVNPAPPGQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIPGPKGDVGNPGLPGLNGQKGEPG-------VGVPGQPGS------PGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPGREGSPGFPGQDGLPGVPGMKGEDGLPGLPGVTGLKGDLGAPGQSGAPGLPGAPGYPGMKGNAGIPGVPG 958 HSP 4 Score: 99.7525 bits (247), Expect = 3.588e-20 Identity = 127/337 (37.69%), Postives = 156/337 (46.29%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGW--EGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVG---------------------PAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGS-----------------------------QGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRN---------GDDGGKGPNGPPGTPGTPGAQGLNGVPGFPG 313
PS G PG +G G+ G+ G+PG+ G+PG G G G PG +PG +G+PG PG G G PGQ G PG G+ G G G G SG PG +G GL G G G+ G G+ G+PG G G G G AGT G G G+PG G G G PG G +G PG PG G G SG QG++G G G+ G+ G +G G PG +G +G+PG PG G G G + G GLPG PGR+ G+ GG G G PG PG PG +G G+PGFPG
Sbjct: 1052 PSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGIPGKAGRQGAPG---SPGQDGLPGFPGMKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGVPGIRGDKGQGGLPGIPGDRGMDGYPGQKGENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPGIPGLKGDSGFPGQPGQEGLPGLSGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPG 1385 HSP 5 Score: 83.5741 bits (205), Expect = 3.796e-15 Identity = 112/277 (40.43%), Postives = 135/277 (48.74%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGEPGQHGIPGSDG---NFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPG--QAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNG---RNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPG 310
+G PG +G G NG GE G+ G DG + G PG PG G G +G+PG PG G GLPG Q G PG G+ G G G +G G+PG G G G G+SG G +G R+G+PG G G +G +G G SG+ G G PG G G G G+PG+PG G G G +G+NG G G G G G AG PG G G PG PG Q+G LPG PG GD G PG PG +GL G+ G
Sbjct: 1005 SGVPGMKGDRGFNGLPGEKGEAGPAARDGQKGDAGLPGQPGLRGPQGPSGLPGVPGFKGETGLPGYGQPGQPGEKGLPGIPGKAGRQGAPGSPGQDGLPGFPGMKGESGYPGQDGLPGRDGLPGVPGQKGDLGQSGQPGLSGAPGLDGQPGV------PGIRGDKGQGGLPGIPGDRGMDGYPGQKGENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPG------------QDG---LPGIPGLKGDS---------GFPGQPGQEGLPGLSG 1251 HSP 6 Score: 69.3218 bits (168), Expect = 8.291e-11 Identity = 121/342 (35.38%), Postives = 140/342 (40.94%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPG------------SHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPA--------------------GTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQ------------------------PGRNGDDGGK-----------------GPNGPPGTPGTPGAQGLNGVPGF 311
G PG G G G G+PG G PG DG PG PG G G G+PG PG G G PGQ G G G AGT G G +G G PG G G+ G G SG G G+ G+PG SG G G G G G G PG G G SG GAPG G +G+PG PG G +GA+G G+ G DG G G+DG G G+ G G G+PG PG G G G+ G G G+ PGR+G G G G PG PG PG +G G+PG
Sbjct: 1125 GLPGVPGQKGDLGQSGQPGLSGAPGLDGQ---PGVPGIRGDKGQGGLPGIPGDRGMDGYPGQKGENGYPGQPGLPGLGGEKGFAGTPGFPGLKGSPGYPGQDGLPGIPGLKGDSGFPGQPGQEGLPGLSGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEKGDGGLPGLPGRDGLPGADGPVGPPGPSGPQNLVEPGEKGLPGLPGAPGLRGEKGMPGL 1463 HSP 7 Score: 65.4698 bits (158), Expect = 1.307e-9 Identity = 120/322 (37.27%), Postives = 140/322 (43.48%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNG------------VPGSP--------------GPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAG---GSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDG-----------------KAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
AG PG G G G+ G+ G GIPG G+ G PG PG G PG +G PG G G PGLPGQ G G G+ G G G G G PG+ G +G+ G G+ GL G GR+G PG G G VG AG G G G PG G GG G GA G+AG G PGVPG G G G G G DG G + G+ G G G PG +G G+PG GP G G G Q G G PG PG +G+ +G+ G+PGFPG G
Sbjct: 1205 AGTPGFPGLKGSPGYPGQDGLPGIPGLKGDSGFPGQPGQEGLPGLSGEKGMGGLPGMPGQPGQSIAGPVGPPGAPGLQGKDGFPGLPGQKGESGLSGLPGAPGLKGESGMPGFPGAKGDLGANGIPGKRGEDGLPGVPGRDGQPGIPGLKGEVGGAGLPGQPGFPGIPGLKGEGGLPGFPGAKGEAGFPGTPGVPGYAGEKGDGGLPGLPGRDGLPGADGPVGPPGPSGPQNLVEPGEKGLPGLPGAPGLRGEKGMPGLDGPPGNDGPPGLPGQRGNDGYPGAPGLSGE------------------KGMGGLPGFPGLDGQ 1508 HSP 8 Score: 62.7734 bits (151), Expect = 8.857e-9 Identity = 131/372 (35.22%), Postives = 148/372 (39.78%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGP-----PGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGS---------GLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAG---------PAGTSGSVGTPGNPGSGG----------PSGGFGAPGQAGVAGVPGV---------------------PGTGGTMGASGSQGQNGPDGHDGKAGQDG--SAGQAGVPGPQ------------GATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQG------------------------LNGVPGFPGFPGNL 318
S P+G PG GP G G+ G PGQ IPG G G PG GA G G NG+PG GPPG PG PGQ G PG +G G G G G GT G GG+ G G G SG GP G G+PG GP G G G G G G PG PG G P G G G+ G G PGV G G G SG GQ+G G G G+ G GQ G PG + G G+PG P P A Q G+ GLPG G G G G G PG PG PG +G + G+PG PG G++
Sbjct: 433 SGPSGIPGLPGPKGEPGYRGTPGQS-IPGLPGKDGKPGLDGAPGRKGENGLPGVRGPPGDSLNGLPGAPGQRGAPGPNGYDGRDGVNGLPGAPGTKGDRGGTCSACAPGTKGEKGLPGYSGQPGPQGDRGLPGMPGPVGDAGDDGLPGPAGRPGSPGPPGQDGFPGLPGQKGEPTQLTLRPGPPGYPGLKGENGFPGQPGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGLSGKPGQDGLPGLPGNKGEAGYGQPGQPGFPGAKGDGGLPGLPGTPGLQGMPGEPAPENQVNPA-PPGQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIPGPKGDV 802 HSP 9 Score: 61.6178 bits (148), Expect = 2.021e-8 Identity = 123/355 (34.65%), Postives = 137/355 (38.59%), Query Frame = 0
Query: 52 GVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGV---------------------PGS----------PGPPGPPGLPGQAGTPGSHGV------------------AGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPN--------------------GRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTM---------------------GASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQ---PGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPG 313
G G +G PG G PG G+ G PG PG +G G +G+ PG PGPPG PGL G+ G PG GV G G G G SG PG G GL G G++G P G G+PG P V PA P G G PG PG+ G G G PG+ G G PG+PG G G G G GP G G G G GQ G PG G G PGSPG G G AG G GL GQ PG G GG G G G PG PG +G G+PG PG
Sbjct: 540 GTKGEKGLPGYSGQPGPQGDRGLPGMPGPVGDAGDDGLPGPAGRPGSPGPPGQDGFPGLPGQKGEPTQLTLRPGPPGYPGLKGENGFPGQPGVDGLPGPSGPVGPPGAPGYPGEKGDAGLPGLSGKPGQDGLPGLPGNKGEAGYGQPGQPGFPGAKGDGGLPGLPGTPGLQGMPGEPAPENQVNPAPP----GQPGLPGLPGTKGEGGYPGRPGEVGQPGFPGLPGMKGDSGLPGPPGLPGHPGVPGDKGFGGVPGLPGIPGPKGDVGNPGLPGLNGQKGEPG-VGVPGQPGSPGFPGLKGDAGLPGLPGTPGLEGQRGFPGAPGLKGGDGLPGLSGQPGYPGEKGDAGLPGVPG 889
BLAST of collagen alpha-1 chain-like vs. nr
Match: gi|959056408|ref|XP_014731121.1| (PREDICTED: collagen alpha-2(I) chain isoform X2 [Sturnus vulgaris]) HSP 1 Score: 123.635 bits (309), Expect = 3.222e-25 Identity = 122/280 (43.57%), Postives = 138/280 (49.29%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQ------HGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPG------QAGTPGS---HGVAGTAGSFGTRGPSGTPGSAGGSGLSGPV------------GQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQA---------GVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDG 286
G+PGP+GP G G GE G G PG +GN G G PG G G G G GPPG GLPG +AG PG HG G G G RG G PG +G G +GP+ G G GP G +G PG+ GP+GPVG GP G G G GNPG+ GP G GAPG G G PG PG G +GA G GQ GP G G G G AG G+ GPQG G G PG G G G NG+ GLPG G++GD G
Sbjct: 492 GFPGPKGPTGEPGKPGEKGNVGLAGPRGAPGPEGNNGAQGPPGVTGNQGGKGETGPAGPPGFQGLPGPSGPAGEAGKPGERGLHGEFGVPGPAGPRGERGPPGESGAVGPAGPIGSRGPSGPPGPDGNKGEPGPLGVSGPPGARGPSGPVGSPGPNGAPGEAGLDGNPGNDGPPGRDGAPGFKGERGAPGNPGPSGALGAPGPHGQVGPSGKPGNRGDPGPAGAVGPAGAFGPRGLAGPQGPRGEKGLPGDKGPRGLPGLKGHNGLQGLPGLAGQHGDQG 771 HSP 2 Score: 110.538 bits (275), Expect = 3.799e-21 Identity = 125/314 (39.81%), Postives = 144/314 (45.86%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHG------IPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGT---PGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGL------AGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGF---------------GAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGG------------KGPNGPPGTPGTPGAQGLNGVPGFPGF 314
G PG GP G+ G G PG G PG+DG GP G G G PG G PG GP G PG PG+ G G G G G+ G +GP G G+ GG G +GP G G +GP G G PG G +G G GPAG G G PG G+ GP+G G PG GV+G PG G G +G+ G G G G DG G DG G+ G PG +G G PG+PGP G G G Q G G PG G G G GP GP G G PG +G G+PG G
Sbjct: 441 GEPGLMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGKPGEKGNVGLAGPRGAPGPEGNNGAQGPPGVTGNQGGKGETGPAGPPGFQGLPGPSGPAGEAGKPGERGLHGEFGVPGPAGPRGERGPPGESGAVGPAGPIGSRGPSGPPGPDGNKGEPGPLGVSGPPGARGPSGPVGSPGPNGAPGEAGLDGNPGNDGPPGRDGAPGFKGERGAPGNPGPSGALGAPGPHGQVGPSGKPGNRGDPGPAGAVGPAGAFGPRGLAGPQGPRGEKGLPGDKGPRGLPGLKGH 754 HSP 3 Score: 103.99 bits (258), Expect = 4.400e-19 Identity = 127/306 (41.50%), Postives = 140/306 (45.75%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDG---------NFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATG------------------VPGSPGPLGTAGTAGQAAQNGIGGLPG---QPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
G PG GP G G G PG G+PG+DG N G G GA G G G PG PG GP GLPGQ G+PG G G G G G G G AG G G +G G GP G G PG G G GP G G G+ G G PG G GG G G AG G G+PG G G +G G+ G G G G G G+ G PG GA G G PGPLG +G G +G G PG PG G DG G +GPPG G PG +G G PG PG G L
Sbjct: 384 GEPGSAGPPGPAGLRGVPGSRGLPGADGRAGVMGPAGNRGASGPVGAKGPSGDAGRPGEPGLMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGKPGEKGNVGLAGPRGAPGPEGNNGAQGPPGVTGNQGGKGETGPAGPPGFQGLPGPSGPAGEAGKPGERGLHGEFGVPGPAGPRGERGPPGESGAVGPAGPIGSRGPSGPPGPDGNKGEPGPLGVSGPPGARGPSGPVGSPGPNGAPGEAGLDGNPGNDGPPGRDGAPGFKGERGAPGNPGPSGAL 689 HSP 4 Score: 101.679 bits (252), Expect = 2.447e-18 Identity = 101/220 (45.91%), Postives = 118/220 (53.64%), Query Frame = 0
Query: 79 GALGTPGTNGVPGSPGPPGPPGL---PGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQ---DGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNG 292
G G G+ G PGS GPPGP GL PG G PG+ G AG G G RG SG G+ G SG +G G+ GL GP G G PGS GP G GP G G G VG G G+ G G G PG G G PG PG G +G +G +G GP+G++G G G+ G G GP G G G PGP G AG AG+ + G+ G G PG G G +GP G
Sbjct: 375 GEEGKRGSPGEPGSAGPPGPAGLRGVPGSRGLPGADGRAGVMGPAGNRGASGPVGAKGPSGDAGRPGEPGLMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGKPGEKGNVGLAGPRGAPGPEGNNGAQGPPGVTGNQGGKGETGPAGPPGFQGLPGPSGPAGEAGKPGERGLHGEFGVPGPAGPRGERGPPG 594 HSP 5 Score: 100.908 bits (250), Expect = 3.766e-18 Identity = 132/319 (41.38%), Postives = 155/319 (48.59%), Query Frame = 0
Query: 43 GYPGPRG---PAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGN---------PGSGGPSGGFGAPGQAGVAGVPGVPGTGGTM------------------GASGSQGQNG---------------PDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
G PG RG P G G+ G PG G G G+ G G G GTPG G PG+PG G PG PG G PG G G G G RG + GSAG +G +GP+G +G G G G G GP G VGP GPAG G +G PG+ PG+ G G GA G GVAG PG+PG G + G +G++G++G P G +GK G G G AG PGP G GVPGS G G G A G+ G G G +G G KGP+G G PG PG G G+PG PG PG
Sbjct: 150 GRPGERGVAGPQGARGFPGTPGLPGFKGIRGHNGLDGQKGQPGTPGNKGEPGAPGENGTPGQPGARGLPGERGRVGAPGPAGARG---SDGSAGPTGPAGPIGAAGPPGFPGAPGAKGEIGPAGNVGPTGPAGPRGEIGLPGSSGPVGPPGNPGANGLPGAKGAAGLPGVAGAPGLPGPRGILGPPGPAGPSGARGLVGEPGPAGAKGESGMKGEPGAAGPAGPPGPSGEEGKRGSPGEPGSAGPPGPAGLRGVPGSRGLPGADGRA------GVMGPAGNRGASGPVGAKGPSGDAGRPGEPGLMGPRGLPGQPGSPG 459 HSP 6 Score: 100.138 bits (248), Expect = 6.651e-18 Identity = 118/293 (40.27%), Postives = 140/293 (47.78%), Query Frame = 0
Query: 67 GSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPV---GQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQ---------------------------GQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAG---------QAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTP---GTPGAQGLNGVPGFPGFPGN 317
G +G G PG PG+ G PG G+ G PG G PG G+AG G G G +G G +GPSG G G GL GP GQ G GP G+ G G G +G VGP GPAG G G G PG GP+G G PG+ G G+ G G G G +G+Q G +GP G GK G+ G G+ GVPGP G G G PG G G AG +G G PG G +G G +GP+GP G+P G PG GL+G PG G PG
Sbjct: 375 GEEGKRGSPGEPGSAGPPGPAGLRGVPGSRGLPGADGRAGVMGPAGNRGASGPVGAKGPSGDAGRPGEPGLMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGKPGEKGNVGLAGPRGAPGPEGNNGAQGPPGVTGNQGGKGETGPAGPPGFQGLPGPSGPAGEAGKPGERGLHGEFGVPGPAGPRGERGPPGESGAVGPAGPIGSRGPSGPPGPDGNKGEPGPLGVSGPPGARGPSGPVGSPGPNGAPGEAGLDGNPGNDGPPGR 667 HSP 7 Score: 96.2857 bits (238), Expect = 1.285e-16 Identity = 130/309 (42.07%), Postives = 151/309 (48.87%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEGEPGQ------------HGIPGSDGNFGPPGTPGALGTPGTNGV------------PGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGK------AGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQ---NGIGGLPGQPGRNGDDGGK---GPNGPPGTPGTPGAQGLNGVPGFPG 313
PAG GP GPAG G G PG +G+PG+ G G PG GA G PG G+ G G PGP G G++G G G AG AG G G G GS G G +GP G +GL G G G+PG+ G G +GPAG G SG VG + GPSG G PG+ G+ G G+PG G+ G +G +G G G DG+ AG G G G PGP+G TG PG PG G G AG G G G PG G+ GGK GP GPPG G PG G G G PG
Sbjct: 268 PAGNVGPTGPAGPRGEIGLPGSSGPVGPPGNPGANGLPGAKGAAGLPGVAGAPGLPGPRGILGPPGPAGPSGARGLVGEPGPAGAKGESGMKGEPGAAGPAGPPGPSGEEGKRGSPGEPGSAGPPGPAGLRGVPGSRGLPGADGRAGVMGPAGNRGASGPVG------AKGPSGDAGRPGEPGLMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGKPGEKGNVGLAGPRGAPGPEGNNGAQGPPGVTGNQGGKGETGPAGPPGFQGLPGPSGPAGEAGKPG 570 HSP 8 Score: 95.9005 bits (237), Expect = 1.527e-16 Identity = 134/359 (37.33%), Postives = 155/359 (43.18%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGT---------------------------AGSFGTRGPSG------------------------TPGSAGGSGLSGPVGQSGLAGPNG------------RNGIPGSSGPNGPVGPAG---------------PAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNG----IG--GLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PG G G+ G G GQ G PG+ GN G PG PG GTPG G G PG G G PG AG GS G AG AG+ G GP+G PG+ G +GL G G GL GP G G+ G GP G G +G P+G G G+PG PGS GP G G G G G+PG G G MG +G++G +GP G G +G G G+ G+ GP+G G PGSPGP G G G +G IG G G+PG G G KGP G PG PG G GL G G PG GN
Sbjct: 168 GTPGLPGFKGIRGHNGLDGQKGQPGTPGNKGEPGAPGENGTPGQPGARGLPGERGRVGAPGPAGARGSDGSAGPTGPAGPIGAAGPPGFPGAPGAKGEIGPAGNVGPTGPAGPRGEIGLPGSSGPVGPPGNPGANGLPGAKGAAGLPGVAGAPGLPGPRGILGPPGPAGPSGARGLVGEPGPAGAKGESGMKGEPGAAGPAGPPGPSGEEGKRGSPGEPGSAGPPGPAGLRGVPGSRGLPGADGRAGVMGPAGNRGASGPVGAKGPSGDAGRPGEPGLMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGKPGEKGNVGLAGPRGAPGPEGN 526 HSP 9 Score: 73.9442 bits (180), Expect = 8.995e-10 Identity = 67/138 (48.55%), Postives = 75/138 (54.35%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPP---GPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGL---SGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAG 169
PS P G PGP G G G +G PG G PG DG G G GA G PG +G G+PGP GP G PG G PG G G AG+FG RG +G G G GL GP G GL G NG G+PG +G +G GP G
Sbjct: 637 PSGPVGSPGPNGAPGEAGLDGNPGNDGPPGRDGAPGFKGERGAPGNPGPSGALGAPGPHGQVGPSGKPGNRGDPGPAGAVGPAGAFGPRGLAGPQGPRGEKGLPGDKGPRGLPGLKGHNGLQGLPGLAGQHGDQGPPG 774 HSP 10 Score: 72.0182 bits (175), Expect = 3.414e-9 Identity = 101/235 (42.98%), Postives = 115/235 (48.94%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPG------------SDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQA---GTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGP------AGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPG 256
G PGP GP G G GE G G G DGN G PG G G PG G G G PGP G PG+A G PG+ G G G+ G +G G PG+ G SG G G G GP+G+ G G GP G VGPAG AG G G G PG GP G G G G+ G+PG+ G G G G+ G GP G G +G G G+ G+PGP G GV GS G
Sbjct: 579 GVPGPAGPRGERGPPGESGAVGPAGPIGSRGPSGPPGPDGNKGEPGPLGVSGPPGARGPSGPVGSPGPNGAPGEAGLDGNPGNDGPPGRDGAPGFKGERGAPGNPGPSGALGAPGPHGQVGPSGKPGNRGDPGPAGAVGPAGAFGPRGLAGPQGPRGEKGLPGDKGPRGLPGLKGHNGLQGLPGLAGQHGDQGPPGNTGPAGPRGPPGPSGPPGKDGRNGLPGPIGPAGVRGSHG 813
BLAST of collagen alpha-1 chain-like vs. nr
Match: gi|532077319|ref|XP_005324443.1| (collagen alpha-2(V) chain [Ictidomys tridecemlineatus]) HSP 1 Score: 123.635 bits (309), Expect = 3.774e-25 Identity = 129/312 (41.35%), Postives = 150/312 (48.08%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGP---PGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQD------GSAGQAGVPGP---------------------QGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
+ P G G G GV G++GE G G PG G GP G PG G G G PG+ GPPGP G PG G PGS G+ G G+ G RGP G+ G GG G G G+ GL G G G PG GP G +GP G +G G G PG+ G G G G PG G +G PG PG G G G +G G DG G +G G G+ G PGP QG G PG+ GPLG G G + G G+ G PG G GG GP+GP G+PG G G G PG G PG +
Sbjct: 458 TGPQGIRGQTGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGSPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGASGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGI 769 HSP 2 Score: 115.546 bits (288), Expect = 1.244e-22 Identity = 118/291 (40.55%), Postives = 136/291 (46.74%), Query Frame = 0
Query: 49 GPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVG------------------PAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVVL 321
GP G G G G G+PG G GP G PG G +G+PG PGP GP G+PG +G PG+ G+ G AG G RGP G G G +G GPVG GL G G +G PG+ GP G G GP G G G PG P G G+AG G PG G G +G G +G+ GP G G G G G+ G PG +G G G PGP G G G +G G G PGR PG PG PGA+GL G PG G G L L
Sbjct: 324 GPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGA---HGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAMGTDGTPGAKGPTGSPGTSGPPGLTGPPGSPGPQGSTGPQGIRGQTGDPGVP---------GFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGSPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR------------PGEPGLPGARGLTGNPGVQGPEGKLGPL 590 HSP 3 Score: 105.531 bits (262), Expect = 1.968e-19 Identity = 131/313 (41.85%), Postives = 148/313 (47.28%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGS---------------------PGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGG---FGAPGQAGVAGVP---GVPGTGGTMGASGSQGQNGPDGHDG-KAGQD--GSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGK---GPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
P P G PG RG G G G+ G HG+PG G GP G PG+ G PG G+ G PGP G GLPG GT G+ G G GS GT GP G G G G G G G+ G G G+PG G GP G GP G G +G PG G GP G G PG G G P G PG+ G G G+QG+ GP G G K GQ G G+ G+PG +G TG PG GP G G G + ++G G PG G G G GP G G PG PG G GVPG G PG
Sbjct: 334 PLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAMGTDGTPGAKGPTGSPGTSGPPGLTGPPGSPGPQGSTGPQGIRGQTGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGSPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGASGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGK 646 HSP 4 Score: 96.2857 bits (238), Expect = 1.325e-16 Identity = 131/347 (37.75%), Postives = 152/347 (43.80%), Query Frame = 0
Query: 43 GYPGPRGPAG---VNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVP---GSPGPPGPPGLPGQAGTPGSHGVAGT---------------AGSFGTRGP------------------------SGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHD------------GKAGQDGSAGQAGVPGPQGATGVPGSPGP------LGTAGTAGQAAQNGIGGLPGQPGRNGD---------DGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PG RG G V G EG+ G G G DG GPPG+ G G PG+ G+P GS G PG PG G AG PG G G AG G +GP G PG G G GP G+ G G G GI G G G G GP G GS G G G GP G G PG+ G+AG PG G G +G G++G G DG G G+ G G G+ GP G+ G PGS G +G AG G Q G+ G PG+PG+ GD G GP+GP G PG G +G G PG GFPG+
Sbjct: 567 GLPGARGLTGNPGVQGPEGKLGPLGASGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913 HSP 5 Score: 92.8189 bits (229), Expect = 1.633e-15 Identity = 115/269 (42.75%), Postives = 131/269 (48.70%), Query Frame = 0
Query: 64 GIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGA---------------PGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PG +GN G G G+PG G PG+PG PG G G G G G G G+ G GP+G G+ G G G G+ G GP G G G+ G G GP GP G GS G PGNPG G +G GA PG G G+PG GT GT GA G G G G G G GS G G GPQG G G PG G G AG + G G+ G G G++G +GP G PGT G PG G G PG GFPG+
Sbjct: 267 GEPGRNGNTG---EVGFTGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAMGTDGTPGAKGPTGSPGTSGPPGLTGPPGSPGPQGSTGPQGIRGQTGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGSPGNRGFPGS 532 HSP 6 Score: 88.9669 bits (219), Expect = 2.574e-14 Identity = 122/361 (33.80%), Postives = 138/361 (38.23%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGV------PGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGS------------------------------------------------VGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIG------------------------------GLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
P G PG GP G G G PG G PGSDG GP G G G G++G PG PG PG PG G G PG G G G G G G PG G G+ G G GL GP G +G PG G G G G G G G PG+PG+ GP G G G G G PG+ G G G +G G +GP G G G G G G+ G G G+ G+PGP G G G+ G GL G PG G+ G +G NGP G G G QG +G PG G PG
Sbjct: 505 PRGDPGTVGPPGPMGERGSPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGASGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE 865 HSP 7 Score: 83.1889 bits (204), Expect = 1.315e-12 Identity = 121/349 (34.67%), Postives = 143/349 (40.97%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPG---TNGVPGSPGPPGPPGLPGQAGTPGSHGVA---------------------------------------------------GTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSG---SVGTPGNPGSGGPSGGFGAPGQAGVAGV---------------------------PGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGV---PGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQG 304
G PG +GP G G G G+ G PG G+ G G PG++G PG ++G PG PG G G+PGQ G PG G G G G RG G PG G G++G G+ G+AG +G +G GS GP G VG GP G G G G PG G GG G G G AG G+ G G+ G GS+G+NGP G G AG G GQ GV PG G G GSPGP G AG+ G NG+ GL GG+G GPPG G PG+ G
Sbjct: 576 GNPGVQGPEGKLGPLGASGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGL---------KGGRGTQGPPGATGFPGSAG 915 HSP 8 Score: 82.0333 bits (201), Expect = 3.117e-12 Identity = 128/357 (35.85%), Postives = 145/357 (40.62%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGR---------------NGIPGSSGPNGPVG------------------------------------PAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQ------------------------NGPDGHDGKAGQDGSAGQ---------AGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGF 314
G PGPRG G PG G PGS G GP G G G G +G PG G PG PG G AG+PG G+AG+ G G P+G PG GG G GP G +G G GR G PG GP G G P GPAGT+G G G PGQ G G+PG+PG GT G G G GP G+DG G+DG+ G+ AG+PG QGA PG+PGP+G G AGQ G G G PGR G G GP GP G G G +G G G GF
Sbjct: 815 KGEPGPRG------LVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHG---PNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQSGPDGPPGPAGTTGQRGI------------VGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGEHGDRGDPGPAGLPGSQGA---PGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLHGPQGPRGDKGDSGDRGDRGQKGHRGF 1147 HSP 9 Score: 81.2629 bits (199), Expect = 5.916e-12 Identity = 89/210 (42.38%), Postives = 99/210 (47.14%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGL---------------SGPVGQSGLAGPNGRNGIPGSSGPNGP---VGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSA 237
GPRG G G GEPG G+PG G G G G G+PG G G GPPG G+PG+ G G+ G G G G +G GT G+ G GL G G GL GP G G PGS G NGP VG AGP G G G G PG G G G+PG G+AG PG G G G G +G GP G G G G
Sbjct: 708 GPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRV 917
BLAST of collagen alpha-1 chain-like vs. nr
Match: gi|1334023903|ref|XP_023568104.1| (collagen alpha-2(V) chain [Octodon degus]) HSP 1 Score: 123.635 bits (309), Expect = 4.114e-25 Identity = 129/312 (41.35%), Postives = 149/312 (47.76%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGP---PGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQD------GSAGQAGVPGP---------------------QGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
+ P G G G GV G++GE G G PG G GP G PG G G G PG+ GPPGP G PG G PGS G+ G G+ G RGP G+ G GG G G G+ GL G G G PG GP G +GP G G G G PG+ G G G G PG G +G PG PG G G G +G G DG G +G G G+ G PGP QG G PG+ GPLG G G + G G+ G PG G GG GP+GP G+PG G G G PG G PG +
Sbjct: 458 TGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGTPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGI 769 HSP 2 Score: 120.168 bits (300), Expect = 4.512e-24 Identity = 128/279 (45.88%), Postives = 145/279 (51.97%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVVL 321
G G GP G G G G G+PG G GP G PG G +G+PG PGP GP G+PG AG PG+ G+ G AG G RGP G G G +G GP G GL G G +G PG+ GP G G +GP G G G+PG GS GP G G PG GV G G G G G G QG GP G +GK G G G G PGP G G PG+ G G+ G G G G G +G GG+G G PG PG PGA+GL G PG G G L L
Sbjct: 318 GAKGEAGPTGQMGAMGPLGPRGMPGERGRLGPQGAPGQRGA---HGMPGKPGPMGPLGIPGSAGFPGNPGMKGEAGPTGARGPEGPQGQRGENGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLLGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGN---RGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPL 590 HSP 3 Score: 103.219 bits (256), Expect = 1.053e-18 Identity = 124/284 (43.66%), Postives = 139/284 (48.94%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGG---FGAPGQAGVAGVP---GVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
G PGP GP G+ G G PG PG G GP G G G G G G PGP G GLPG GT G+ G G GS GT GP G G G G G G G+ G G G+PG G GP G GP G G +G PG G GP G G PG G G P G PG+ G G G+QG+ GP G G G G G+ G PG GA G+ G+PG G G G G PG+ GR G G G G PG+ G PG +G +G PG PG GN V
Sbjct: 363 GKPGPMGPLGIPGSAGFPGN---PGMKGEAGPTGARGPEGPQGQRGENGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLLGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPL------GAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637 HSP 4 Score: 98.9821 bits (245), Expect = 1.809e-17 Identity = 117/269 (43.49%), Postives = 133/269 (49.44%), Query Frame = 0
Query: 64 GIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGA---------------PGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PG +GN G G G+PG G PG+PG PG G G G G G G G+ G GP+G G+ G G G G+ G GP G G G+ G G GP GP G GS G PGNPG G +G GA PG AG G+PG GT GT GA G G G G G G GS G G GPQG G PG PG G G AG + G G+ G G G++G +GP G PGT G PG G G PG GFPG+
Sbjct: 267 GEPGRNGNTG---DVGFTGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGQMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMKGEAGPTGARGPEGPQGQRGENGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLLGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGS 532 HSP 5 Score: 98.5969 bits (244), Expect = 2.685e-17 Identity = 107/276 (38.77%), Postives = 129/276 (46.74%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPG---QHGIPGSDGNFGPPGTPGALGTPGT---------------------NGVPGSPGPPGPPGLPGQAG---TPGSHGVAGTAG---SFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGD 284
+ P G GP GP G G G PG G+PG+ G G PG G G+ GT G+ G PG PG PG G+AG PG HGV G G G RGP G PG+ G G G G G G G +G+PG G G GP G +G G G PG PG G PG G+ G PGV G G +G G+ G++G G G G G G G+PGP+G++G PG PG G AG GQ G PG++G+
Sbjct: 389 AGPTGARGPEGPQGQRGENGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLLGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGE------PGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---------GAPGKDGE 649 HSP 6 Score: 93.9745 bits (232), Expect = 6.306e-16 Identity = 130/349 (37.25%), Postives = 149/349 (42.69%), Query Frame = 0
Query: 43 GYPGPRGPAG---VNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPG---SPGPPGPPGLPGQAGTPGSHGVAGT---------------AGSFGTRGP------------------------SGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGP----------------QGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGT------------PGAQGLNGVPGFPGFPGNL 318
G PG RG G V G EG+ G G PG DG GPPG+ G G PG+ G+PG S G PG PG G AG PG G G AG G +GP G PG G G GP G+ G G G GI G G G G GP G GS G G G GP G G PG+ G+AG PG G G MG G++G G DG G G G +G AG G QG+ G G G +G AG G Q G+ G PG+PG+ G+ G GP G G+PG G QG G GFPG G +
Sbjct: 567 GLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGTPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGMGEKGAEGTAGNDGARGLPGPLGPSGPAGPTGEKVNQYCAKFSLIFVFSQGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGNAGSPGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGSAGRV 915 HSP 7 Score: 90.5077 bits (223), Expect = 7.371e-15 Identity = 120/315 (38.10%), Postives = 135/315 (42.86%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRN----------------GIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSA---------------GQAGVPGPQGATGVPGSPGPLGTAGTAGQAA---------------------------QNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGA 302
GPRG G G GEPG G+PG G G G G G+PG G G GPPG G+PG+ G G+ G G G G +G GT G+ G GL GP+G SG AGP G G G +GP G VG AGP G G G G PG G G G+PG G+AG PG G G G G +G GP G G G G G+ G GP G G PGS G +G G AG Q GI G+PGQ G G G GP G PG G GA
Sbjct: 708 GPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGMGEKGAEGTAGNDGARGLPGPLGPSGPAGPTGEKVNQYCAKFSLIFVFSQGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGNAGSPGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGA 1022 HSP 8 Score: 81.6481 bits (200), Expect = 4.538e-12 Identity = 133/362 (36.74%), Postives = 151/362 (41.71%), Query Frame = 0
Query: 29 EQVASQCACPSSPAGYPGPRGPAGVNGWEGEPGQHGIPG-------SDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGG---------------------------------------PSGGFGAPGQAGVAGVPGVPGTGGTMGASG------------------------SQGQNGPDGHDGKAGQDGSAGQAGV---PGPQG---ATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGF 314
E+ A A G PGP GP+G G GE S G+ G G GA+G G G G PG G PG PGQ G GS G G AGS G GP G PG GG G GP G +G G GR G PG +G GP GP G G G G G+PGS G G G PGQ G G+PG+PG GT G G G GP G+DG G+DG+ G+ G PGP G ++G PG+PGP+G G AGQ G G G PGR G G GP GP G G G +G G G GF
Sbjct: 784 EKGAEGTAGNDGARGLPGPLGPSGPAGPTGEKVNQYCAKFSLIFVFSQGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGNAGSPGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEAGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSSGAPGTPGPVGAPGDAGQRGDPGSRGPMGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1145 HSP 9 Score: 75.8702 bits (185), Expect = 2.709e-10 Identity = 105/284 (36.97%), Postives = 118/284 (41.55%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGS-------VGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGD---------------DGGKGPNGPPGTPGTPGAQG 304
G PG GP G G G PG+ G PG G PG G+ G GP GP G PG GT G G G G G RG +GTPG G G G G G AG +G G+PG GP+GP GP G V + G+ G GP+G G G G G PGV G G+ GQ G+AG PGPQG G PG GP+G G G G G G PG G G G GPPG G PG+ G
Sbjct: 699 GDPGAVGPLGPRGERGNPGERG------------EPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGMGEKGAEGTAGNDGARGLPGPLGPSGPAGPTGEKVNQYCAKFSLIFVFSQGSRGENGPTGAVGFAGPQGPDGQPGV------------------KGEPGEPGQKGNAGS---PGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHG 949 HSP 10 Score: 68.5514 bits (166), Expect = 4.513e-8 Identity = 117/320 (36.56%), Postives = 134/320 (41.88%), Query Frame = 0
Query: 16 LFLESEERQGRKVEQVASQCACPSSPAGYPGPRGPAGVNGWEGE---PGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGS---------------------------PGPPGPPGL---------------------------------------PGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQ 266
+F+ S+ +G A A P P G PG +G G G +G PG G+ GS G GP G PG G GT G PG+ PG GPPGL PG AGT G G+ G G G RG G PG AG G GP G +G GP G G G NGPVG AGP G +G+ GTPG G+ G G G PG AG+ G G PGT G +GA G GQ G G G G G AG+ G+PGPQG G G G G G G
Sbjct: 826 IFVFSQGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGNAGSPGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPV---GPPGSNGPVGEAGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSSGAPGTPGPVGAPGDAGQRGDPGSRGPMGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGH 1142
BLAST of collagen alpha-1 chain-like vs. nr
Match: gi|504126969|ref|XP_004577038.1| (PREDICTED: collagen alpha-2(V) chain [Ochotona princeps]) HSP 1 Score: 123.25 bits (308), Expect = 4.897e-25 Identity = 129/312 (41.35%), Postives = 149/312 (47.76%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGP---PGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQD------GSAGQAGVPGP---------------------QGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
+ P G G G GV G++GE G G PG G GP G PG G G G PG+ GPPGP G PG G PGS G+ G G+ G RGP G+ G GG G G G+ GL G G G PG GP G +GP G G G G PG+ G G G G PG G +G PG PG G G G +G G DG G +G G G+ G PGP QG G PG+ GPLG G G + G G+ G PG G GG GP+GP G+PG G G G PG G PG +
Sbjct: 458 TGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPAGTIGDTGPPGLQGMPGERGI 769 HSP 2 Score: 117.472 bits (293), Expect = 3.036e-23 Identity = 126/273 (46.15%), Postives = 143/273 (52.38%), Query Frame = 0
Query: 49 GPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVVL 321
GP G G G G G+PG G GP G PG G +G+PG PGP GP G+PG AG PG+ G+ G AG G RGP G G G +G GP G GL G G +G PG+ GP G G +GP G G G+PG GS GP G G PG GV G G G G G G QG GP G +GK G G G G PGP G G PG+ G G+ G G G G G +G GG+G G PG PG PGA+GL G PG G G L L
Sbjct: 324 GPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGA---HGMPGKPGPMGPLGIPGSAGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLPGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGN---RGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPL 590 HSP 3 Score: 98.9821 bits (245), Expect = 1.719e-17 Identity = 125/284 (44.01%), Postives = 140/284 (49.30%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGG---FGAPGQAGVAGVP---GVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
G PGP GP G+ G G PG PG G GP G G G G G G PGP G GLPG GT G+ G G GS GT GP G PG G G G G G+ G G G+PG G GP G GP G G +G PG G GP G G PG G G P G PG+ G G G+QG+ GP G G G G G+ G PG GA G+ G+PG G G G G PG+ GR G G G G PG+ G PG +G +G PG PG GN V
Sbjct: 363 GKPGPMGPLGIPGSAGFPGN---PGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLPGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPL------GAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637 HSP 4 Score: 98.9821 bits (245), Expect = 2.041e-17 Identity = 118/269 (43.87%), Postives = 133/269 (49.44%), Query Frame = 0
Query: 64 GIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGA---------------PGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PG +GN G G G+PG G PG+PG PG G G G G G G GS G GP+G G+ G G G G+ G GP G G G+ G G GP GP G GS G PGNPG G +G GA PG AG G+PG GT GT GA G G G G G G GS G G GPQG G PG PG G G AG + G G+ G G G++G +GP G PGT G PG G G PG GFPG+
Sbjct: 267 GEPGRNGNTG---EVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLPGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGS 532 HSP 5 Score: 95.5153 bits (236), Expect = 2.609e-16 Identity = 135/347 (38.90%), Postives = 156/347 (44.96%), Query Frame = 0
Query: 43 GYPGPRGPAG---VNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPG---SPGPPGPPGLPGQAGTPGSHGVAGTAGS------------FGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTP------------------GNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGS---------------AGQAGVPGPQGATGVPGSP------------GPLGTAGTAGQAAQNGIGGLPGQPGRNGD---------DGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PG RG G V G EG+ G G PG DG GPPG+ G G PG+ G+PG S G PG PG G AG PG G G G G RG G PG G GL GP G G G G G+PG G GP+GP G G G G P G GS GP+G G G G+ G+PG G GT G G +G G G +G AG DG+ G+ G PGP+G G PGS G +G AG G Q G+ G PG+PG+ GD G GP+GP G PG G +G G PG GFPG+
Sbjct: 567 GLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPAGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913 HSP 6 Score: 90.8929 bits (224), Expect = 6.108e-15 Identity = 128/361 (35.46%), Postives = 147/361 (40.72%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGP---------------------PGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGT---PGSAGGSGLSGPVGQSGLAGPNGRNGIPGS---------------SGPNGPVGPAGPAGTSG---------------SVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIG------------------------------GLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
P G PG GP G G G PG G PGSDG GP PG PG G PG G+ G+PG GP G G G PG G G GS G RG G+ PG G SG G G++G AG G+ G PG +G G GP GP G G G PG+PG+ GP G G G G G PG+ G G G +G G +GP G G AG G G G+ G G G+ G+PGP G G G+ G GL G PG G+ G +G NGP G G G QG +G PG G PG
Sbjct: 505 PRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPAGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE 865 HSP 7 Score: 90.5077 bits (223), Expect = 9.057e-15 Identity = 132/344 (38.37%), Postives = 149/344 (43.31%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGG---------------------------------------PSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQ------------------------NGPDGHDGKAGQDGSAGQ---------AGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGF 314
G PGPRG G PG G PGS G GP G G G G +G PG G PG PG G AG+PG G+AG S G GP+G PG GG G GP G +G G GR G PG +G GP GP G G G G G+PGS G G G PGQ G G+PG+PG GT G G G GP G+DG G+DG+ G+ AG+PG QGA PG+PGP+G G AGQ G G G PGR G G GP GP G G G +G G G GF
Sbjct: 816 GEPGPRG------LVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAG---SPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGA---PGTPGPVGAPGDAGQRGDPGSRGPVGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147 HSP 8 Score: 85.8853 bits (211), Expect = 2.299e-13 Identity = 125/349 (35.82%), Postives = 147/349 (42.12%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPG---TNGVPGSPGPPGPPGLPGQAGTPGSHG------------VAGTAGSFGTRGPS---------------------GTPGSAGGSGLSGPVGQSG---------LAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPG------------NPGSGGPSGGFGAPGQAGVAGV---------------------------PGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGV---PGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQG 304
G PG +GP G G G PG+ G PG G+ G G PG++G PG ++G PG PG G G+PGQ G PG G +AG G G GP+ G PG G G GP G+ G + G G G+ G GP+GP G GPAGT G G PG PG G GG G G G AG G+ G G+ G GS+G+NGP G G AG G GQ GV PG G G GSPGP G AG+ G NG+ GL GG+G GPPG G PG+ G
Sbjct: 576 GNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPAGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGL---------KGGRGTQGPPGATGFPGSAG 915 HSP 9 Score: 81.6481 bits (200), Expect = 3.960e-12 Identity = 121/317 (38.17%), Postives = 134/317 (42.27%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGL---------------SGPVGQSGLAGPNGRNGIPGSSGPNGP---VGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSA---------------GQAGVPGPQGATGVPGSPGPLGTAGTAGQAA---------------------------QNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGA 302
GPRG G G GEPG G+PG G G G G G+PG G G GPPG G+PG+ G G+ G G G G +G GT G+ G GL G G GL GP G G PGS G NGP VG AGP G G G G PG G G G+PG G+AG PG G G G G +G GP G G G G G+ G GP G G PGS G +G G AG Q GI G+PGQ G G G GP G PG G GA
Sbjct: 708 GPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPAGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGA 1024 HSP 10 Score: 76.2554 bits (186), Expect = 2.010e-10 Identity = 126/388 (32.47%), Postives = 147/388 (37.89%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQ---HGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTR---------------------------GPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGAS---------------GSQGQNGPDGHDGKAGQDGSA---------------------------------------GQAGVPGPQGATGVPGSPGPLGTAGT------------------------AGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
P G PG RG G+ G GE G HG G G+ GP GT G G PG G+PG G G PG G G G G GTAG+ G R GP G+ G+ G G +GP G G AGP G +G PG G G G G AG+ G G G+PG GP+G G G G G PG G G+ G G G+ GP G G G G G G+PG +G G+PG PGP GT G G+ G G G PGR+G G +G G PG G PG+QG G PG G PG+
Sbjct: 709 PRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPAGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGD 1096 HSP 11 Score: 66.6254 bits (161), Expect = 1.825e-7 Identity = 114/307 (37.13%), Postives = 129/307 (42.02%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQ------------HGIPGSDGNFGPPGTPGALGTPGTNGVPGS---------------------------PGPPGPPGL---------------------------------------PGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQ 266
P+ G+ GP+GP G G +GEPG+ G+ GS G GP G PG G GT G PG+ PG GPPGL PG AGT G G+ G G G RG G PG AG G GP G +G GP G G PGS+GP G GP GPAG GTPG G+ G G G PG AG+ G G PGT G +GA G GQ G G G G G AG+ G+PGPQG G G G G G G
Sbjct: 841 PTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGND---GTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPVGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGH 1144
BLAST of collagen alpha-1 chain-like vs. nr
Match: gi|533115507|ref|XP_005373380.1| (PREDICTED: collagen alpha-2(V) chain [Chinchilla lanigera]) HSP 1 Score: 123.25 bits (308), Expect = 5.159e-25 Identity = 129/312 (41.35%), Postives = 149/312 (47.76%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGP---PGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQD------GSAGQAGVPGP---------------------QGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
+ P G G G GV G++GE G G PG G GP G PG G G G PG+ GPPGP G PG G PGS G+ G G+ G RGP G+ G GG G G G+ GL G G G PG GP G +GP G G G G PG+ G G G G PG G +G PG PG G G G +G G DG G +G G G+ G PGP QG G PG+ GPLG G G + G G+ G PG G GG GP+GP G+PG G G G PG G PG +
Sbjct: 458 TGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKLGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGI 769 HSP 2 Score: 114.775 bits (286), Expect = 2.463e-22 Identity = 124/273 (45.42%), Postives = 141/273 (51.65%), Query Frame = 0
Query: 49 GPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVVL 321
GP G G G G G+PG G GP G PG G +G+PG PGP GP G+ G G PG+ G+ G AG G RGP G G G +G GP G GL G G +G PG+ GP G G +GP G G G+PG GS GP G G PG GV G G G G G G QG GP G +GK G G G G PGP G G PG+ G G+ G G G G G +G GG+G G PG PG PGA+GL G PG G G L L
Sbjct: 324 GPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGA---HGMPGKPGPMGPLGISGSPGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLIGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGN---RGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPL 590 HSP 3 Score: 106.686 bits (265), Expect = 8.110e-20 Identity = 125/313 (39.94%), Postives = 146/313 (46.65%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGP------PGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSG------------------PVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGG---FGAPGQAGVAGVP---GVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
P P G PG RG G G G+ G HG+PG G GP PG PG G G G G+ GP GP G G+ G PG G G G+ GT GTPG+ G +G +G G G+ G G G+PG G GP G GP G G +G PG G GP G G PG G G P G PG+ G G G+QG+ GP G G G G G+ G PG GA G+ G+PG G G G G PG+ GR G G G G PG+ G PG +G +G PG PG GN V
Sbjct: 334 PLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGISGSPGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAMGT---DGTPGAKGPTGSAGTSGPPGLIGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPL------GAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637 HSP 4 Score: 96.2857 bits (238), Expect = 1.314e-16 Identity = 116/266 (43.61%), Postives = 131/266 (49.25%), Query Frame = 0
Query: 67 GSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGA---------------PGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G G G G G G+PG G PG+PG PG G G G G G G G+ G GP+G G+ G G G G+ G GP G G G+ G G GP GP G SGS G PGNPG G +G GA PG AG G+PG GT GT GA G G G G G G GS G G GPQG G PG PG G G AG + G G+ G G G++G +GP G PGT G PG G G PG GFPG+
Sbjct: 267 GEAGRNGNTGEVGFTGSPGARGFPGAPGLPGLKGHRGHKGLGGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGISGSPGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLIGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGS 532 HSP 5 Score: 94.3597 bits (233), Expect = 5.136e-16 Identity = 122/306 (39.87%), Postives = 144/306 (47.06%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPG---QHGIPGSDGNFGPPGTPGALGTPGT---------------------NGVPGSPGPPGPPGLPGQAG---TPGSHGVAGTAG---SFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGF 314
+ P G GP GP G G G PG G+PG+ G G PG G G+ GT G+ G PG PG PG G+AG PG HGV G G G RGP G PG+ G G G G G G G +G+PG G G GP G +G G G PG PG G PG G+ G PGV G G +G G+ G++G G G G G G G+PGP+G++G PG PG G AG +PGQ G G DG GP+GP G PG G +G G PG GF
Sbjct: 389 AGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLIGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGE------PGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAG------------VPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGF 676 HSP 6 Score: 91.6633 bits (226), Expect = 3.847e-15 Identity = 127/361 (35.18%), Postives = 146/361 (40.44%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGP---------------------PGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGT---PGSAGGSGLSGPVGQSGLAGPNGRNGIPGS---------------SGPNGPVGPAGPAG---------------TSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIG------------------------------GLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
P G PG GP G G G PG G PGSDG GP PG PG G PG G+ G+PG GP G G G PG G G GS G RG G+ PG G SG G G++G AG G+ G PG +G G GP GP G G G PG+PG+ GP G G G G G PG+ G G G +G G +GP G G G G G G+ G G G+ G+PGP G G G+ G GL G PG G+ G +G NGP G G G QG +G PG G PG
Sbjct: 505 PRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKLGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE 865 HSP 7 Score: 80.8777 bits (198), Expect = 6.668e-12 Identity = 123/299 (41.14%), Postives = 143/299 (47.83%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGE------PGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGP---------PGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGT---------GGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PGP+G +G G GE PGQ G PG DG GP G G G G G G PGP PGPPG G+ G G G G G G RG G PG G G++G G+ G+AG +G +G GS GP G VG GP G G G G G+ GP G G G+ G G G G G G +G +G+ GP G G G G+ G G GP GA G G GP G G G+ + G G G PG G G GP+GP G PG G +G G PG GFPG+
Sbjct: 615 GLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKLGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDTGSPGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGS 913 HSP 8 Score: 80.8777 bits (198), Expect = 8.615e-12 Identity = 89/210 (42.38%), Postives = 99/210 (47.14%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGL---------------SGPVGQSGLAGPNGRNGIPGSSGPNGP---VGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSA 237
GPRG G G GEPG G+PG G G G G G+PG G G GPPG G+PG+ G G+ G G G G +G GT G+ G GL G G GL GP G G PGS G NGP VG AGP G G G G PG G G G+PG G+AG PG G G G G +G GP G G G G
Sbjct: 708 GPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDTGSPGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGSAGRV 917 HSP 9 Score: 77.7962 bits (190), Expect = 6.573e-11 Identity = 128/353 (36.26%), Postives = 143/353 (40.51%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGR---------------NGIPGSSGPNGPVG------------------------------------PAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQ------------------------NGPDGHDGKAGQDGSAGQ---AGVPGPQ---GATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGF 314
G PGPRG G PG G PGS G GP G A+G G G G PG G PG PGQ G GS G G AGS G GP G PG GG G GP G +G G GR G PG GP G G P GPAGT+G G G PGQ G G+PG+PG GT G G G GP G+DG G+DG+ G+ G PGP G++G PG+PGP+G G AGQ G G G PG+ G G GP GP G G G +G G G GF
Sbjct: 816 GEPGPRG------LVGPPGSRGNPGSRGENGPTG---AVGFAGPQGPDGQPGVKGEPGEPGQKGDTGSPGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGI------------VGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSSGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGQAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1147 The following BLAST results are available for this feature:
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 24
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BLAST of collagen alpha-1 chain-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of collagen alpha-1 chain-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold476_size161517:151143..158522+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold476_size161517-snap-gene-0.39 ID=maker-scaffold476_size161517-snap-gene-0.39|Name=collagen alpha-1 chain-like|organism=Tigriopus kingsejongensis|type=gene|length=7380bp|location=Sequence derived from alignment at scaffold476_size161517:151143..158522+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'collagen alpha-1 chain-like' has the following synonyms
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