maker-scaffold476_size161517-snap-gene-0.39-mRNA-1, maker-scaffold476_size161517-snap-gene-0.39-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold476_size161517-snap-gene-0.39-mRNA-1
Unique Namemaker-scaffold476_size161517-snap-gene-0.39-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold476_size161517supercontigscaffold476_size161517:151143..158522 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
collagen alpha-1 chain-likemaker-scaffold476_size161517-snap-gene-0.39Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1123maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1123Tigriopus kingsejongensisexon
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1124maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1124Tigriopus kingsejongensisexon
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1125maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1125Tigriopus kingsejongensisexon
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1126maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1126Tigriopus kingsejongensisexon
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1127maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1127Tigriopus kingsejongensisexon
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1128maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1128Tigriopus kingsejongensisexon
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1129maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1129Tigriopus kingsejongensisexon
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1130maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:exon:1130Tigriopus kingsejongensisexon
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:five_prime_utrmaker-scaffold476_size161517-snap-gene-0.39-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:cdsmaker-scaffold476_size161517-snap-gene-0.39-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:cdsmaker-scaffold476_size161517-snap-gene-0.39-mRNA-1:cds-2002990Tigriopus kingsejongensisexon
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:cdsmaker-scaffold476_size161517-snap-gene-0.39-mRNA-1:cds-2002991Tigriopus kingsejongensisexon
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:cdsmaker-scaffold476_size161517-snap-gene-0.39-mRNA-1:cds-2002992Tigriopus kingsejongensisexon
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:cdsmaker-scaffold476_size161517-snap-gene-0.39-mRNA-1:cds-2002993Tigriopus kingsejongensisexon
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:cdsmaker-scaffold476_size161517-snap-gene-0.39-mRNA-1:cds-2002994Tigriopus kingsejongensisexon
maker-scaffold476_size161517-snap-gene-0.39-mRNA-1:cdsmaker-scaffold476_size161517-snap-gene-0.39-mRNA-1:cds-2002995Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2002996auto2002996Tigriopus kingsejongensispolypeptide
Tk11952Tk11952Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11952

>Tk11952 ID=Tk11952|Name=Tk11952|organism=Tigriopus kingsejongensis|type=polypeptide|length=740bp
LSRLVAIIVVEEREKLFLESEERQGRKVEQVASQCACPSSPAGYPGPRGP
AGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPG
LPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPN
GRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGV
AGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATG
VPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTP
GAQGLNGVPGFPGFPGNLVVLPNKVDGVWSGWGLWSECQFDADDCGNGMQ
ERTRACNDPPPSHGGDSCAGDGVESQMCNVPCPINGGLADWSEWSSCVHN
TGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTDCPVDGGFG
EYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCVE
TCTGTTQFKLLKPTNAAGISANGVTVTVTDKNAGSGFEMEFTADPTGVIE
LMHSGLQTVLVKVEKDGISPYTVELTLDPSGGMFLLPVIEMLNAGETAVT
LTWTEKIMDMNMDSFQNDCMCKIGFDMDPNCMQGTTTISREKGGGGASTV
GGETEYIKYSGPFDPALTHTIVVDMTIGNTADFALSMATVFVIRDGMGSL
YAIPPNPDSETIWKVGILTPADGSFVPESTSPYIDAKPCP
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mRNA from alignment at scaffold476_size161517:151143..158522+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold476_size161517-snap-gene-0.39-mRNA-1 ID=maker-scaffold476_size161517-snap-gene-0.39-mRNA-1|Name=maker-scaffold476_size161517-snap-gene-0.39-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=7380bp|location=Sequence derived from alignment at scaffold476_size161517:151143..158522+ (Tigriopus kingsejongensis)
GACGAGTTGTCGCGCCTGGTGGCGATCATTGTGGTTGAGGAACGCGAAAA
ATTATTCCTAGAATCAGAAGAAAGACAAGGCAGAAAAGTGGAACAAGTGG
CCTCTCAATGCGCCTGCCCATCGAGCCCAGCTGGATATCCAGGGCCTAGG
GGCCCAGCTGGTGTAAACGGATGGGAAGGCGAACCTGGCCAACATGGTAT
CCCGGGCAGCGATGGCAACTTCGGCCCACCCGGAACACCAGGAGCATTGG
GAACCCCAGGCACCAACGGGGTTCCCGGATCTCCAGGTCCACCTGGTCCG
CCAGGCCTCCCAGGCCAAGCTGGCACACCAGGCTCGCACGGAGTGGCTGG
AACGGCAGGATCATTTGGGACAAGAGGACCTAGTGGTACTCCTGGATCAG
CGGGCGGATCAGGGCTGTCAGGTCCGGTGGGTCAATCTGGGTTGGCAGGC
CCCAATGGCAGGAATGGGATTCCGGGCTCCTCAGGGCCCAACGGACCCGT
GGGACCCGCAGGGCCGGCTGGTACATCCGGTTCGGTGGGCACACCAGGCA
ATCCTGGATCAGGTGGTCCATCTGGTGGTTTTGGTGCCCCCGGTCAAGCT
GGAGTGGCTGGTGTTCCAGGAGTGCCAGGAACTGGTGGCACCATGGGAGC
CTCGGGATCCCAAGGGCAGAATGGTCCCGATGGGCACGATGGAAAAGCAG
GCCAAGATGGATCCGCAGGTCAAGCCGGTGTCCCGGGTCCCCAAGGAGCC
ACTGGAGTCCCAGGCTCTCCAGGCCCCCTTGGCACCGCTGGCACGGCTGG
TCAGGCCGCTCAAAATGGAATAGGAGGCCTCCCAGGCCAACCCGGCAGAA
ATGGTGACGACGGAGGAAAGGGTCCCAATGGGCCACCTGGCACCCCCGGA
ACTCCTGGTGCACAGGGTTTAAATGGGGTGCCAGGATTTCCTGGTTTTCC
AGGAAACTTGGTGGTCCTTCCCAATAAAGGTAAGCAAAAAATAGTTTTCC
CAGGGGTCACGTGGTTCCAATGTTTTTGTAATTAACCAAGGCAAGCATGT
GCAAATTTGTGGCACCATTTCGATTGATACCAGTGTCAAAAGATTTGGGT
ATTTTCGCAAATTCTCTGATGTTTTTTCCTAAAATTGGGCGTTCTTCATC
ATTGATAACTTGATGCTGCATGTCGAATTATCGGCCAGTTGTCACTATTC
TCTTTCAAACTCTTTAACAGATTTAGAAAAAAGAATATTGAATTAAGTTT
CACCGATGACTCTCCTTGAATTTTGTGATACATCAAGTCATTATTTGCCA
TTATTTTCCTGCTGAAAATTGCCTGGATTTCTTCAAATGTGAATTTAATT
TTCTTGTATTGATCTAAATCTGCAGGTCAATTTGAATTCCCCAAAAATAC
TTTGGACATATTTTGAATTTGGATATTTTTTCGTGATTTCCTCTGTTACT
TAATGGGGTGTTTCCGCTCATGGTCCACTATTTGTGGGTTTTGGGCGATT
TTTTTACGTTTTTTTTTCTTTTTTGATGATTTTATTTGCTGGAACCGGCA
TTTTTATCGTTTATTTCCATCGCTTTTGGAGGCAATTTTATAGCTTTTTT
AAAGCCCTACTAATTATCATAGGAGAGGAAAGGAATTTATTTGACACATT
CTCTAGGAATGATTACATGTTTTTTTGTCGATTTACATGTACATGCTTTA
CAAATAGTAGTACATAACGTACTAATAATTGCCAATTGAAGGTAATATAT
TATGAATTTGGATAAGTCACCGCTTGTTCTCACCATTTTATCATATACTC
GCTTTTGAACGAAAACAAAATTTGCCGTTTCACTGGCGATTTTTAATCAT
ATTTGTCTTTTTGCTCAACCAAACTCTGGCTGGAACGGTTCAAATAATTA
AATAAATCGATCTAATTAGAATTATAATCTCCAAGTTCACTCAAACGCAG
TGTGTATGACAAGAATTTGATTTCACAATTAGCAACAATTGAGCTATGGT
TGGTTGACTATTGACAAAGGCTTATTTCAAAATTAGGGTTCTACGTATGA
TTTTCACCCTTAATGGCATTTGCCGAACGTTAAGGAATAGCGAGACAAAA
ATGTCAATTTTGGCCATTTTTGAAACTACCGACAAGTGACTACAGTAGAT
CTCGAAATCCCTCTTGCTTCTCGCACATAAATCTAAAATTGGGTAGCTAC
TCAGCAAAAAAATAAAAATGCTATCCCCTTCATTTTTGCTTCCTGGGATT
TCACCCGCCGTATGGTCTTATCTCCAGAGATGTTCTTGTCTCGCTTTCCC
ATCGAGGTTTCTTCTCCCGCTAGTCTGCCATTATCGATGCATTCCCTCTG
TAGATCAGAGTTGGCGAATATGTAAACTGTCAAGGACTTGCTTATATCAA
TCTAATGTCGAAAAAAGAAATGTCATTCTGGGCCATTTATCTCACTAAGA
TCCTGGCAACTCTGCTCATGGCGATGGGATTGCACATGGAACCCTGTACA
CATGGAAATATTGCGCTGGCCAGACTTGGTTTTGAGTCACTTTTGAGTTT
GGCCCCAAGTCTGGCAATGCACAATCGTGAGTAATACTTGTAAATGTACG
TACATGGATTTGAGTAGAATGAGTAAAAACTTACGACGCCGCATGAAATG
AGAAGGAACAGAATTCAAATGAGGGCTGCTTAGTTGCCACCTATTCCCTA
ATGAAAAAAGGCCCACTTTGCCGAACTATTAGTCTTCCAAATTTAGAAAA
TAGGTTAGTTCGAGTTTAGGTTAGTTCGAGTTTAGGCTAGTTCGAGATTA
GGTTAGTTCAAGATTAGGTTATTTCGAGATTAGGTTAATTCGAGATTAGG
TTAGTTCAATGTTTGGTTAGTTCAACATTATTAGGTTGGTTCATCATTAT
TAGGTTGGTTCAACATTATTAGGTTGGTTCAACATTATTAGGTTGGTTCA
ACATTATTAGGTTGGTTTAACATTATTTGGTTGGTTCAACATTATTAGGT
TGGTTTAACATTATTAGGTTGGTTCAACATTAGGTTAGTTCAATTTTAGG
CTAGTTCAACATTAGGTTAGTTCAACATTAGGCTAGTTCAATTTTAGGTT
AGTTCGATTTCCGATGAATCGATCGATGTTTTAGGCATAATAAGATTATG
AAAAGTCGCCAATTAGGCTTGCGAAGTTTGGAATTTCTGCTCTCGTTTTC
CCAAAAATGCTGTTTCGCTATTCCGACTCCCAGGGTTGAAGTGTCTATCA
AAGTGAATATTGCACAGCCTTAATTGACAATTGACAAGTGCCATTTTTTC
AGTGGATGGTGTATGGTCCGGATGGGGCCTGTGGTCCGAGTGCCAATTTG
ATGCGGATGATTGTGGAAATGGAATGCAGGAACGAACTCGAGCTTGTAAT
GATCCTCCCCCAAGCCACGGGGGCGATTCTTGCGCAGGCGATGGAGTAGA
ATCACAAATGTGTAATGTCCCATGTCCAAGTAAGTACATGAACTCCGATT
GCTCACTTGATTTCGAAGCCTACTCCGGTGTGATTCGTGTCACCTAATCT
GTTAACATGTTGTCATTGAAAGCCAGGGTATAATATTGTGCTGCTTTTCT
ACCTTCAGTTAACGGAGGACTGGCGGATTGGAGCGAGTGGAGTTCTTGTG
TGCATAATACGGGAACATGTGGATTGGGACTCGAAACCCGCACTCGCACT
TGTACAAACCCTTCGCCGGATTTTGGAGGCATGAGCTGCCCAGATGCCGA
TCCCAACTCGGAGAGTCGGACTTGCTTTACAGACTGTCCAGGTAAGTGCA
TCCCTTATAAATAAACCGATTTCATGAGCAATGCGAGTGTTGCATTTTGG
GAGCTCAAAACGCCACTACTAACACTTTTCGTCTGAGAGCAAGGCGGTCA
GGTTCCAATACCAGCTCAAAGCCCAAACCGAGGTTCCTCACCAACACAGA
CAAAAAAAGACCAATTTCTGAAAAAAAATTCTGTCTTGGCAGATGGGGAA
ATTTGCCTGAAAGACGTCAAAACCAGGTAGATATTGGGAAACACGGCAAA
AGCAGTTTCTTTTGTACCGTACAAACGGTTTTCAAGTGTTTTTGGTTTTT
TTCTGTTCCCAGTGATCGAGCATCATTACGGGATGCATACCGTGCATTAC
GCAGAAAATGAGCGCGCCCAGATCCCATGGACGCCATTTTGCCCTAACAG
GCTGTCGTGTTTCTCGAGATATGCCAATCTATCCGAGAACGGTGTCAACC
ATGTACTGGACGAACGAGATACAAGAGATGACTAAAGCTTATTCATGAGA
AATGACTGCACTAGAGGTAATAAATGCTGGGAAATGCAATTAGCCAGCTT
GACGGGTGAAGCGCAGGAGGATACAACACAGGCCTAAAATTGGCTCGTCC
AAATGTACAGTAGTAAACTTGTCTAAATATTTCTGAAGCAATATCTTTAC
TCTTTCTGTCACTTAGAACCCTAGAATTTAGACGGAGGCCCTGGGCAGTA
GGCCACGGATAGCACAAGAACAGTTAAGGAAATCCATGAGTAGGCACAGC
ATTCCGTACCTGGGATTCACCTCTTTGGCCCGAAGTTGACCAGTTGCTTC
GTTCCTATCGAATGTAGGATGGTAGAGAACGACATGCACCTGGTAGTTCC
TGGTAAATTGCACTGAAACGCACACAAATCACACTTTGGCACATATTCGG
ACAATAACGGAAAAAAACAGTGCCCTTGTCAACAGTGCACATTGGTACAG
TAGTGCCGAGTCCCTGGCATGAAATTAAATTTCAAGGGGAGAAACCACCT
GACGGTTGATATCATTTTTATGCTTTGCTTGGTGTTTTTTTTTGAAATAA
TGTTCACTTCAGAATTCAATATGATATACTGGTGTTTAGGTTAATTTGAG
CACATTTTGAAATGCAGAAATGCCCTGATGTGGCCAGATTAAGGACAGCC
TCGCTCCCGCCCCGTGGGTTTCCTACGTTTATACAGCCAAGTGGCCAGGA
CAGCCTAAAGATGAGTGGGCAATGGGCAAATTATATCAGGCTACCTAAGA
CAAACCACTCGAAGGCAAACTTGAACTACAAAATGTGCATTGACATTAAT
TTGTTGGAGTCCTTGGTAGAAGTTGGCCCATATCAATTAGGCTATTAGGT
AGAGAAGGGACCAGACAATGTTCGCCACTTCAAACGGCGGAAAGGAACTA
CAATCTCCATCTTTCTCACTCTTTTTTTTCAGTGGATGGTGGTTTTGGCG
AATATGGTGACTTTGGAGCTTGTATTCCGCGGGCATTTGGTTGTGGAGAC
GGCACGAAAACTCAAAGTCGACTCTGCGACAATCCCGTGCCTCAATTTGA
AGGCGCCGAGTGTATGGGTGCATTCACCCAATCGGACGATTGTGTTGAAA
CTTGCACTGGTAAGCTTTGACATCGTTGGTTATCGGGGAATCGAGCTTGA
TCCTTGCCTCAATCCCTGCCAGGCACTACCCAGTTCAAATTGCTCAAGCC
CACCAACGCAGCTGGGATCAGCGCTAATGGTGTCACAGTCACAGTCACGG
ATAAGAATGCTGGGTCAGGTTTTGAGATGGAATTCACAGCGGATCCTACT
GGCGTAATCGAGTTGATGGTGAGCACTCGATCCAATGGGGCCGGATATGG
TTGGAGGTCTTATTTGGGTACCCTTTTCTCCTACAGCACTCAGGACTACA
GACAGTGCTCGTGAAAGTGGAGAAGGATGGGATCTCGCCCTACACTGTCG
AACTTACATTGGATCCCAGTGGAGGCATGTTTTTACTCCCCGTCATCGAA
ATGTTGAACGCCGTGAGTACTCTGAGAGCCGGGTGAGGAATTTCTCCATG
TCTTTGACGGTGGTCACATTTTTCAGGGCGAGACTGCCGTAACCTTGACT
TGGACGGAAAAAATCATGGACATGAACATGGATTCCTTTCAAAACGACTG
CATGTGTAAAATTGGGTTCGACATGGACCCAAACTGCATGCAAGGGACTA
CCACGATATCACGAGAAAAAGGGGGCGGAGGAGCTAGCACCGTGGGCGGC
GAGACGGAATACATCAAATACTCAGGCCCATTCGACCCAGCACTAACCCA
TACAATTGTCGTGGACATGACAATCGGGTGAGTGCGCAGATATACGTTAC
AAATTCAAGTAGTTTATAACTTGTTCTAAGAAAAGAGTTAACTTTTGGCG
TTGTATCCATGTTTGGGCGGATTGGACGCGTTTCCTACGTTTTTTCCACA
CCTGTTTGCCCATTTTAAGAGGGACAAGGCTGAAACGCTGCCGCTTCACG
GTCAATATTTCAAGATTGAATGGCGGATTGAAACTTCTTTTAGTGCCAAA
TTGCCTTGCTATGTTGTAAATCTTCTTGTCCTTTGGGAAAAAGTGCCAAT
ACCGTAAATCCCTGACGACACGAATTTAAACAAATAATCGACATCTCTAA
TCATCCCATTCTTAGTCGTCTTGAGACTCAATAGGGGTCGTGACTCATGA
GCTCCCGGGCAAATCACGGCGTGAACATGAGCCCAAGTGTGGGCATCTTT
CTCTAGCCTGGAACTGAGAGCATTTGAGAAGGCCCTTGGCGGTGAAGCGT
GGTTCATGTTGGCTTGGGACTACCCCTATGCCCTGGGCCTCACCTCTCGC
CGCTGAAATGGGTTTGTTTTGTCCAGGCGTGGCACACAAAAAGCCTAATT
CAATAACCCCCGTTTAGTAAAGTTCAAAATATTTCTGTAAGACCCGCGCA
CCCTTGTCGCACAAATCAACGAGAAATGCCATCGGGTCGAGGTCCACGTA
TTGTTGCAATAGTTTAAGGTGCTTTCAAAATACACTTCCCACTTGTTCCA
AAGTGGAGAAAATTCGACATTCCCAGGACGTACAACTAGGAAACTGTCAA
GGACACGCGTATCCGTCTCTGCCCCAATGGTGTCTGGATTGGGTCCGTCT
GGATTGCCATGGGCGTTCCTTTGTCTACGTACTGAATGGTTTTGGGCTCA
CACAAATGGAGGCTTGCACAGATTACAGCATAACACTTGACTAATCGCGA
ATACACTTTGCTCTTTCAGAAACACAGCGGATTTCGCGTTGAGCATGGCT
ACCGTCTTTGTCATTCGCGATGGCATGGGTAGTTTGTATGCCATTCCTCC
TAACCCGGACAGTGAGACCATTTGGAAGGTGGGAATATTGACGCCCGCTG
ATGGATCATTCGTGCCAGAAAGCACTAGCCCTTATATTGATGCTAAACCA
TGCCCATAAATATAAGCCTGAAATCTCTCTGAAATTCATCGATGCGATTG
CTGAGATCCCTCCGCCATCACGTTTACCCATCTGTGGATGTTGTTTATTT
CAACCAATAAAGATTAGATATTTCCTTTGA
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