collagen alpha-1 chain-like, maker-scaffold476_size161517-snap-gene-0.39 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000008697 (supercontig:LSalAtl2s:LSalAtl2s53:1054459:1060191:-1 gene:EMLSAG00000008697 transcript:EMLSAT00000008697 description:"maker-LSalAtl2s53-augustus-gene-10.10") HSP 1 Score: 89.3521 bits (220), Expect = 2.184e-18 Identity = 107/252 (42.46%), Postives = 119/252 (47.22%), Query Frame = 0
Query: 60 PGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGF 311
PG G G DGN G PG P A G G G G G G PGL G+ G PG G G G G G G PG G +G GP G SG G G G PG G +GP G G G +G G G+ G G G G G++G G+PGV G G G GSQG G GH G G+ G G G GP+G G G G G G G GI G G PGR G G +G GP G G G G G+PG
Sbjct: 989 PGAPGPRGQDGNPGSPGIPAAKGERGERGDQGERGDDGSPGLRGKPGPPGKDGTVGERGPPGEGGARGDPGIPGKNGPPGPTGASGAVGQPGLEGPPGLPGDSGPSGRPGEKGEAGRDGKDGDGGQPGLPGPPGNRGKSGEDGMPGVQGLTGEKGPPGSQGSPGMTGHKGPPGKQGDTGLPGTIGPRGKAGPTGPIGVTGKPGPRGGRGFPGIEGQTGLPGRQGPVGPRGKQGPQGIQGKSGNSGPQGLPGL 1240 HSP 2 Score: 84.7297 bits (208), Expect = 4.749e-17 Identity = 121/355 (34.08%), Postives = 148/355 (41.69%), Query Frame = 0
Query: 35 CACPSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGP------------------PGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSG---------------------LAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGV---------PGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQ------NGIGGLPGQPGRNGDDGGKGPNGPPGTPG------------------TPGAQGLNGVPGFPGFPGN 317
A S G PGPRG +G PG GIP + G G G G G G+ G+ G PGPPG PG+PG+ G PG G +G G G GP G PG +G SG G G++G +G +G G+ G +G GP G G G +G G PG G G G G G+AG G GV G G G +G G+ GP G GK G G G++G GPQG G+PG G G G G + N I G PG G G GP+GPPG G +PG+ G++G PG G PG
Sbjct: 982 LAAGDSVPGAPGPRG------QDGNPGSPGIPAAKGERGERGDQGERGDDGSPGLRGKPGPPGKDGTVGERGPPGEGGARGDPGIPGKNGPPGPTGASGAVGQPGLEGPPGLPGDSGPSGRPGEKGEAGRDGKDGDGGQPGLPGPPGNRGKSGEDGMPGVQGLTGEKGPPGSQGSPGMTGHKGPPGKQGDTGLPGTIGPRGKAGPTGPIGVTGKPGPRGGRGFPGIEGQTGLPGRQGPVGPRGKQGPQGIQGKSGNSGPQGLPGLPGQSGKPGPPGPPGPPGETITVMPNAISSSNGSPGPEGRQGSMGPSGPPGERGASGERGPSGGMGMPGIPGSPGSPGISGPPGIQGRPGQ 1330 HSP 3 Score: 79.337 bits (194), Expect = 2.356e-15 Identity = 121/324 (37.35%), Postives = 137/324 (42.28%), Query Frame = 0
Query: 34 QCACPSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGP------PGTPGALGTPGTNGVPGSPGPPGPPGLPGQ---------AGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQ----------SGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPG-------------------VPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPG 313
QC + PAG PG +G G G GE G+ G PG GN G PG PG +G PG G PG GP GP GL G+ G G G G G G +G G PG G +G GP G G G G +G+PG G G G G G G G G GS GP G G PG G+ G G VPG G G G+ G G G+ G+ G G+ G G G G PG PG GT G G + G G PG PG+N GP GP G G G GL G PG PG
Sbjct: 773 QCEK-TCPAGPPGSQGLPGRGGRPGEVGERGAPGRPGNTGETGKQGFPGLPGEIGRPGVQGSPGLRGPSGPEGLKGEIGLPGPLGPPGARGKEGPXGKPGPSGEQGRPGLPGQQGKTGERGPAGDITTVVGPVGPPGPKGSEGLSGLPGLDGIPGAKGERGEEGELGLSGKDGRDGSRGPKGDIGQPGPTGLPGRSGRDGQPGPPGIPGALAAGDSVPGAPGPRGQDGNPGSPGIPAAKGERGERGDQGERGDDGSPGLRGKPGPPGKDGTVGERGPPGEGGARGDPGIPGKN------GPPGPTGASGAVGQPGLEGPPGLPG 1089 HSP 4 Score: 78.1814 bits (191), Expect = 5.124e-15 Identity = 117/350 (33.43%), Postives = 136/350 (38.86%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALG------------------------------TPGTNGVPGSPGPPGP---PGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGG--------PSGGFGAPGQAGVAGVP-GVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGD----------------------------------DGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
G GP GP G +G G+PG G PG G+ GP G PG G PG G+ G GPPG PG+ G G PG G G G+ G RG +G G G +G GP G G G G+ G+PG GP GP G GP G G G G G G G P + +P + + G+ G G QG GP G G+ G G G +G G G G PGSPG G G G+ QNG G PG+ D G GP GP G PG G G G PG PG PG
Sbjct: 1062 GKNGPPGPTGASGAVGQPGLEGPPGLPGDSGPSGRPGEKGEAGRDGKDGDGGQPGLPGPPGNRGKSGEDGMPGVQGLTGEKGPPGSQGSPGMTGHKGPPGKQGDTGLPGTIGPRGKAGPTGPIGVTGKPGPRGGRGFPGIEGQTGLPGRQGPVGPRGKQGPQGIQGKSGNSGPQGLPGLPGQSGKPGPPGPPGPPGETITVMPNAISSSNGSPGPEGRQGSMGPSGPPGERGASGERGPSGGMGMPGIPGSPGSPGISGPPGIQGRPGQNGKDGRPGREYSEEDLRDICASVLRDRLSELTSGLRGPPGPPGRGYRGVPGKSGPRGPIGDPGIQGEHGQRGFPGLPGMPG 1411 HSP 5 Score: 73.9442 bits (180), Expect = 1.125e-13 Identity = 108/333 (32.43%), Postives = 129/333 (38.74%), Query Frame = 0
Query: 49 GPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPG---------------LPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSG---------------------PVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSV------------GTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTM----------------------------GASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGL 305
G G+ G +G PG G PG G+ GPPG G G PGT G G GP GP G + GQ G PG G G G G +G G G++G GL G V + ++ NG G G G GP GP G G SG G+PG+PG GP G G PGQ G G PG + + G G G++GP G G G G GQ G P G+PG PGP G++G G G G PG G GP GP G PG G +G+
Sbjct: 1134 GVQGLTGEKGPPGSQGSPGMTGHKGPPGKQGDTGLPGTIGPRGKAGPTGPIGVTGKPGPRGGRGFPGIEGQTGLPGRQGPVGPRGKQGPQGIQGKSGNSGPQGLPGLPGQSGKPGPPGPPGPPGETITVMPNAISSSNGSPGPEGRQGSMGPSGPPGERGASGERGPSGGMGMPGIPGSPGSPGISGPPGIQGRPGQNGKDGRPGREYSEEDLRDICASVLRDRLSELTSGLRGPPGPPGRGYRGVPGKSGPRGPIGDPGIQGEHGQRGFP------GLPGMPGPYGSSGPKGDRGDRGDHGPPGI-------GESGPMGPRGNPGPIGPRGV 1453 HSP 6 Score: 73.1738 bits (178), Expect = 1.974e-13 Identity = 112/295 (37.97%), Postives = 132/295 (44.75%), Query Frame = 0
Query: 70 GNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGT----------SGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDG-----------SAGQA--GVPGPQGATGVPGSP---------GPLGTAGTAGQAAQNGIGGLPGQPGRN---------------GDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G G PG PG G G G PG PG G PG+ G+PG G +G G G G G G G G GP G+ G +G GR G+PG G G GPAG T GS G G PG G G G G+ G G+ G G G+ G G GQ GP G G++G+DG +AG + G PGP+G G PGSP G G G G G+ G PG PG++ GD G G NGPPG G GA G G+ G PG PG+
Sbjct: 799 GERGAPGRPGNTGETGKQGFPGLPGEIGRPGV---QGSPGLRGPSGPEGLKGEIGLPGPLGPPGARGKEGPXGKPGPSGEQGRPGLPGQQGKTGERGPAGDITTVVGPVGPPGPKGSEGLSGLPGLDGIPGAKGERGEEGELGLSGKDGRDGSRGPKGDIGQPGPTGLPGRSGRDGQPGPPGIPGALAAGDSVPGAPGPRGQDGNPGSPGIPAAKGERGERGDQGERGDDGSPGLRGKPGPPGKDGTVGERGPPGEGGARGDPGIPGKNGPPGPTGASGAVGQPGLEGPPGLPGD 1090 HSP 7 Score: 55.8398 bits (133), Expect = 3.700e-8 Identity = 77/222 (34.68%), Postives = 91/222 (40.99%), Query Frame = 0
Query: 50 PAGVNGWEGEPGQHGIPGSDGNFGPPGTPGA------------------LGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTG--GTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGV 251
P ++ G PG G GS G GPPG GA G+PG + GPPG G PGQ G G G + R + S L+ + G G+PG SGP GP+G G G G G PG PG GP G G G G G G PG G G MG G+ G GP G G+ G G+ G PG +G GV
Sbjct: 1264 PNAISSSNGSPGPEGRQGSMGPSGPPGERGASGERGPSGGMGMPGIPGSPGSPGIS------GPPGIQGRPGQNGKDGRPGREYSEEDL--RDICASVLRDRLSELTSGLRGPPGPPGRGYRGVPGKSGPRGPIGDPGIQGEHGQRGFPGLPGMPGPYGSSGPKGDRGDRGDHGPPGIGESGPMGPRGNPGPIGPRG----VGEQGPMGERGAPGKRGKQGV 1473 HSP 8 Score: 51.6026 bits (122), Expect = 7.563e-7 Identity = 76/207 (36.71%), Postives = 87/207 (42.03%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGT-----AGSFGTRGPSGTPGSA--------------GGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSG--GPSGGFGAPGQAGVAGV--------PGVPGTGGTMGAS 216
SS G PGP G G G G PG+ G G G G G PG G+PG+ G+ G PG G PG G+ G PG A R T G G SG GP+G G+ G +G+ G PG G GP G +GP G G G G PG G GP G G PG G GV G PG G G +
Sbjct: 1268 SSSNGSPGPEGRQGSMGPSGPPGERGASGERGPSGGMGMPGIPGSPGSPGISGPPGIQGRPGQNGKDGRPGREYSEEDLRDICASVLRDRLSELTSGLRGPPGPPGRGYRGVPGKSGPRGPIGDPGIQGEHGQRGFPGLPGMPGPYGSSGPKGDRGDRGDHGPPGIGESGPMGPRGNPGPIGPRGVGEQGPMGERGAPGKRGKQGVA 1474
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000009829 (supercontig:LSalAtl2s:LSalAtl2s63:1003125:1030351:1 gene:EMLSAG00000009829 transcript:EMLSAT00000009829 description:"maker-LSalAtl2s63-augustus-gene-10.41") HSP 1 Score: 78.9518 bits (193), Expect = 3.309e-15 Identity = 48/154 (31.17%), Postives = 68/154 (44.16%), Query Frame = 0
Query: 321 LPNK--VDGVWSGWGLWSECQFDADDCGN-GMQERTRACNDPPPSHGGDSCAGDGVESQMCNV--PCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDAD-------PNSE---SRTCFTDCPVDGGFGEYGDFGACI 459
P K +DG W+ W W +C CG G + R R C P PSHGG C GD ++ C PCPI+ ++W W+ C G G G R R + ++GG +C P+ E S+ C CP+D + + G C+
Sbjct: 2024 FPQKCTIDGGWTDWLNWEDCNIL---CGKKGKRIRRRYCAKPIPSHGGKDCYGDKKQTGKCPKLEPCPIHCIWSNWGHWTKCSVTCGPIGYGYRERRRHVAVXA-NYGGSNCDKGAYLESENCPHCEMEKSKQCIPYCPIDCDWSPWNFMGECL 2173 HSP 2 Score: 75.8702 bits (185), Expect = 2.900e-14 Identity = 53/183 (28.96%), Postives = 78/183 (42.62%), Query Frame = 0
Query: 329 WSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHG--GDSCAGDGVESQMCN-VPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTN--PSPDFGG-MSCPDADPNSESRTCFTDCPVDGGFGEYGDFGACIPRAFGCG-DGTKTQSRLCDNPVPQFEGAECMGAFTQSDDC--VETC 502
W WG WS+C + C +G ++ R C D H G + CN +PC + A WS WS C + +CG G + RTR C + G M C + R C +DGG+ ++ ++ C CG G + + R C P+P G +C G Q+ C +E C
Sbjct: 1915 WGAWGEWSKC---SKSCNSGYRKSKRHCKDNKHKHSXYGKQLRAFRERIETCNELPCAV-AIWAKWSLWSKC---SSSCGXGXKRRTRNCIDLYSKRQLGTRMHCLGGSHFIDERCFPQKCTIDGGWTDWLNWEDC---NILCGKKGKRIRRRYCAKPIPSHGGKDCYGDKKQTGKCPKLEPC 2087 HSP 3 Score: 67.781 bits (164), Expect = 9.494e-12 Identity = 51/185 (27.57%), Postives = 74/185 (40.00%), Query Frame = 0
Query: 321 LPNKVDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDS---CAGDG--VESQMCNVPCPINGGLADWSEWSSCVHNTGTCG-LGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAEC-MGAFTQSDDC 498
LP V +W+ W LWS+C + CG G + RTR C D + C G ++ + C I+GG DW W C CG G R R C P P GG C + CP+ + +G + C G G + + R + G+ C GA+ +S++C
Sbjct: 1966 LPCAV-AIWAKWSLWSKC---SSSCGXGXKRRTRNCIDLYSKRQLGTRMHCLGGSHFIDERCFPQKCTIDGGWTDWLNWEDC---NILCGKKGKRIRRRYCAKPIPSHGGKDCYGDKKQTGKCPKLEPCPIHCIWSNWGHWTKCSVTCGPIGYGYRERRRHV-AVXANYGGSNCDKGAYLESENC 2142
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000012507 (supercontig:LSalAtl2s:LSalAtl2s921:182724:187514:1 gene:EMLSAG00000012507 transcript:EMLSAT00000012507 description:"maker-LSalAtl2s921-augustus-gene-1.50") HSP 1 Score: 73.9442 bits (180), Expect = 1.032e-13 Identity = 46/156 (29.49%), Postives = 71/156 (45.51%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDAD----DCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNVPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLC 476
VDG WS W W C ++ D + R R C++P P +GG C G +E+ C NG +WS + +C + TC G++ R R C+NPSP +GG +C D + C + ++ C + C DG ++R+C
Sbjct: 515 VDGKWSAWSEWEGC-YNRDPSLPYSNSKCLCRRRLCSNPKPMNGGKECIGHEIET----ANCTRNGQWTEWSNYGAC---SQTCDAGMQARKRYCSNPSPAYGGKTCIGRDVEHQYCNDLPPCKTKQTVSPWSEWSNC---SSNCNDGFIKRTRVC 659
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000010578 (supercontig:LSalAtl2s:LSalAtl2s702:218313:223892:-1 gene:EMLSAG00000010578 transcript:EMLSAT00000010578 description:"augustus_masked-LSalAtl2s702-processed-gene-1.6") HSP 1 Score: 71.2478 bits (173), Expect = 1.551e-13 Identity = 65/153 (42.48%), Postives = 78/153 (50.98%), Query Frame = 0
Query: 90 PGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGV 242
PG G G G PG G G G AG GS G+RG G G G G G G +GL G +GR+G+PG G +G G +G G G GTPG PG G PG G GV G G+ G MG+ G +G GP G G+ G DG G+ G+
Sbjct: 111 PGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIPG------HPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPGEPGI 257 HSP 2 Score: 66.6254 bits (161), Expect = 4.672e-12 Identity = 56/125 (44.80%), Postives = 66/125 (52.80%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNG---------WEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPG 157
AG PG +G G G +GE G G+PG DG G PG PG G PG +G+ G PG G PG PG G PG G G G G+RGP GS G G++GP G+SG G +G G PG
Sbjct: 135 AGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPM---GSRGERGITGPRGRSGQNGNDGDPGEPG 256 HSP 3 Score: 66.2402 bits (160), Expect = 7.022e-12 Identity = 66/176 (37.50%), Postives = 82/176 (46.59%), Query Frame = 0
Query: 26 RKVEQVASQCA-----CPSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGT------------PGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPG 184
R +E + CA CP G G G GV G +G+ G+ G PGS G+ G G GA G PG +G G PG PG G+PG++G G GV GT G T G G PG G +G+ G +G G G G GI GP G +G +G+ G PG PG
Sbjct: 93 RNLEAIQDFCAATKEYCPPGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPG---TPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGI---------TGPRGRSGQNGNDGDPGEPG 256 HSP 4 Score: 65.0846 bits (157), Expect = 1.570e-11 Identity = 60/146 (41.10%), Postives = 73/146 (50.00%), Query Frame = 0
Query: 102 PGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAG---PNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPG 244
PG+ G G G G G G RG +G PGS G G G +G G G NG G+PG G +G G G G G G G PG G G G PG G+ G GV G G+ G GS+G+ G G G++GQ+G+ G G PG
Sbjct: 111 PGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPGEPG 256 HSP 5 Score: 63.929 bits (154), Expect = 4.237e-11 Identity = 60/153 (39.22%), Postives = 71/153 (46.41%), Query Frame = 0
Query: 156 PGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGA---------PGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGT 299
PG G G VG G G G G G PGS G G GA G+ G AG+PG+ G G G G G G G DG G DG+ G G+PG G G G G +G+ G G + GI G G+ G+NG+DG PG PG
Sbjct: 111 PGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGD------PGEPGI 257 HSP 6 Score: 60.8474 bits (146), Expect = 4.477e-10 Identity = 64/156 (41.03%), Postives = 77/156 (49.36%), Query Frame = 0
Query: 125 PSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPG 280
P G G G G G +G+ G G GR G GS G G +GP GP G G G G PG G G PG+ G+ G+PG G G G G+ G G GH G G++G G+ G GP G+ G G GP G +G QNG G PG+PG
Sbjct: 110 PPGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRD---GLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSG------QNGNDGDPGEPG 256 HSP 7 Score: 58.5362 bits (140), Expect = 1.983e-9 Identity = 58/148 (39.19%), Postives = 66/148 (44.59%), Query Frame = 0
Query: 167 PAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGF 314
P G G G VG PG G G G G PG G G G G G G G G G G DG+ G G G G+PG G G+PG G GT G G +G G+ G+ G G G +G G G G G G +G PG PG
Sbjct: 110 PPGREGKKGEVGNPGVIGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPGEPGI 257 HSP 8 Score: 56.9954 bits (136), Expect = 7.384e-9 Identity = 43/105 (40.95%), Postives = 55/105 (52.38%), Query Frame = 0
Query: 52 GVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIP 156
G G G G+ G+PG G G PG G G PG +G PG+PG PG PG+ G+ G G G G GS G RG +G G +G +G G G+ G+ +N P
Sbjct: 163 GAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPGEPGICVYKVKNSTP 267 HSP 9 Score: 56.6102 bits (135), Expect = 9.149e-9 Identity = 64/157 (40.76%), Postives = 72/157 (45.86%), Query Frame = 0
Query: 170 PAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPG------AQGLNGVPGFPGFPGNLVV 320
P G G G GNPG G G+ G AG PG G+ G GA G G GP G +G AG G G+ G+PG G G+PG G G G G GI G PG G+NG G G GP G+ G G G NG G PG PG V
Sbjct: 110 PPGREGKKGEVGNPGV------IGEKGKRGRAGRPGSKGSRGHRGAIGPPGPRGPKGENGAAGLPGLDGRDGLPGEPGLDGIPGRSGLDGLPGVDGTPGTPGIPGHPGIDGKNGVKGEIGSRGPMGSRGERGITGPRGRSGQNGNDGDPGEPGICVY 260
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000000316 (supercontig:LSalAtl2s:LSalAtl2s1047:1859:17658:-1 gene:EMLSAG00000000316 transcript:EMLSAT00000000316 description:"maker-LSalAtl2s1047-snap-gene-0.10") HSP 1 Score: 67.781 bits (164), Expect = 7.560e-12 Identity = 45/120 (37.50%), Postives = 63/120 (52.50%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCN--VPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTD 442
VD +WS +G WS C CG G Q+R R P ++GG SC GD +ES+ CN CP+N +++ +WSSC + TCG G +T R N G P +E+R+C T+
Sbjct: 237 VDCLWSSYGQWSRCSVS---CGTGTQQRKRMILQPS-TNGGKSCRGDAIESRQCNAGATCPVNCEWSNFGQWSSC---SATCGGGRQTXRR---NIRRRASGSGRPCLGEKAETRSCSTN 346
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000005062 (supercontig:LSalAtl2s:LSalAtl2s264:93708:98509:1 gene:EMLSAG00000005062 transcript:EMLSAT00000005062 description:"maker-LSalAtl2s264-augustus-gene-1.7") HSP 1 Score: 67.3958 bits (163), Expect = 9.060e-12 Identity = 38/93 (40.86%), Postives = 50/93 (53.76%), Query Frame = 0
Query: 344 DCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNVPCP--INGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNS 434
+CG G+Q+RTR C+ P P +GG C+G +E + C CP + GG + WSSC + C R RTC+NPSP GG C D S
Sbjct: 318 NCGKGIQKRTRICDLPSPINGGQPCSGSPIEKKNCVSDCPGSVYGGWTQXTSWSSC---SPEC---FHHRRRTCSNPSPSKGGKYCIGEDLES 404 HSP 2 Score: 56.9954 bits (136), Expect = 1.683e-8 Identity = 43/135 (31.85%), Postives = 62/135 (45.93%), Query Frame = 0
Query: 404 CGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTDCP--VDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCVE-TCTGTTQFKLLKPTNAAGISANGVTVTVTDKNAGS 535
CG G++ RTR C PSP GG C + E + C +DCP V GG+ + + +C P F + R C NP P G C+G +S +C + C T Q ++ NA + VT D ++ S
Sbjct: 319 CGKGIQKRTRICDLPSPINGGQPCSGSP--IEKKNCVSDCPGSVYGGWTQXTSWSSCSPECF------HHRRRTCSNPSPSKGGKYCIGEDLESLNCTDGFCQETRQL-VMYGNNAEEKXGASLEVTEEDTSSSS 444
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000011499 (supercontig:LSalAtl2s:LSalAtl2s796:74576:77471:1 gene:EMLSAG00000011499 transcript:EMLSAT00000011499 description:"augustus_masked-LSalAtl2s796-processed-gene-0.0") HSP 1 Score: 67.0106 bits (162), Expect = 1.153e-11 Identity = 56/212 (26.42%), Postives = 84/212 (39.62%), Query Frame = 0
Query: 319 VVLPNKVDGVWSGWGLWSECQFDADDCGNG--------MQERTRAC----NDP------------------PPSHGGDSCAGDGVESQMCN-VPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPN-----------------------SESRTC-FTDC-PVDGGFGEYGDFGACIPRAFGCGDGTKTQSR 474
++ + + WS W WS C CGN Q +R C N+ P +GG C GD +E++ C+ CP++G DWS+WS CG+G TRTR C NP P+ GG C + + N E ++C DC P+DG + ++ + C + CG G ++R
Sbjct: 165 IIQNSSISCRWSKWSSWSHCSVS---CGNSPGRRXRSRSQNGSRLCSGTENESKKCIVNRCAQDCKKKVLLPHLYGGKPCIGDDLETKRCSGADCPVDG---DWSQWSHXGXCQSKCGVGNRTRTRACDNPPPENGGRPCEENNSNVRDELIRHPRIAEKSEDLPIQTQEEVQSCKLKDCDPIDGRWSKWSRWSTC---SVNCGRGKIIRTR 367
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000012705 (supercontig:LSalAtl2s:LSalAtl2s965:256105:263948:-1 gene:EMLSAG00000012705 transcript:EMLSAT00000012705 description:"maker-LSalAtl2s965-snap-gene-2.9") HSP 1 Score: 65.855 bits (159), Expect = 1.893e-11 Identity = 86/213 (40.38%), Postives = 105/213 (49.30%), Query Frame = 0
Query: 57 EGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAG-----SFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPG--SPGPLGTAG 262
+GEPG G PG P G G G PG +G+ G PG PG G G+AG G++G + G S GP G PG G G++G G+ G G G+NGIPGS G G G GP G G G PGQA + G PG PG G G GS+GQ G +G GK G+ G G+ G G G++G PG +P PLG G
Sbjct: 137 KGEPGLIGKPG------PKGPQGEPGLPGYDGIQGRPGEPGKKGEIGKAGMKGNNGYVLSVGGGDFPSAIIEGPPGAPGPKGSPGVNGNDGKPGKLGIPGKNGIPGSPGKRGKRGRDGPPG----------------KGEKGYPGQAAMKGNPGDPGKTGIPGLPGSKGQKGDNGESGKNGERGKRGKKGEKGELGSSGPPGLDAPCPLGPDG 327 HSP 2 Score: 61.2326 bits (147), Expect = 4.684e-10 Identity = 66/195 (33.85%), Postives = 80/195 (41.03%), Query Frame = 0
Query: 154 GIPGSSGPNGPVGPAGPAG-----------------TSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGP-----------------------------DGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGP--LGTAGTAGQAA---------QNGIGGLPGQPGRNGDDGGKGPN 291
G+PG +G GP G GP G G G G PG GP G G PG G+ G PG PG G +G +G +G NG +G+DGK G+ G G+ G+PG G G G GP G G GQAA + GI GLPG G+ GD+G G N
Sbjct: 100 GLPGKNGFPGPFGIDGPKGEKLLSLGFSIDSNQVLMLKGEPGLIGKPGPKGPQGEPGLPGYDGIQGRPGEPGKKGEIGKAGMKGNNGYVLSVGGGDFPSAIIEGPPGAPGPKGSPGVNGNDGKPGKLGIPGKNGIPGSPGKRGKRGRDGPPGKGEKGYPGQAAMKGNPGDPGKTGIPGLPGSKGQKGDNGESGKN 294
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000007552 (supercontig:LSalAtl2s:LSalAtl2s436:271825:290086:-1 gene:EMLSAG00000007552 transcript:EMLSAT00000007552 description:"maker-LSalAtl2s436-snap-gene-3.19") HSP 1 Score: 63.929 bits (154), Expect = 8.021e-11 Identity = 41/118 (34.75%), Postives = 57/118 (48.31%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMC-NVPCPI-NGGLADWSEWSSC-VHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTC 439
V G W W W+ C CG G + R+R CN+P +GG+ C G ++S C N C I + G ++W++WS C V G G R R C+ FGG +C + E R C
Sbjct: 477 VHGNWGKWTQWTYCTVS---CGRGRKSRSRLCNNPSLQNGGNHCQGRALDSTFCSNGLCSIADYGFSEWTQWSKCSVDCIG--DRGNNVRNRFCSTSKLQFGGRNCKGS--RKEKRLC 587 HSP 2 Score: 60.077 bits (144), Expect = 1.380e-9 Identity = 41/138 (29.71%), Postives = 61/138 (44.20%), Query Frame = 0
Query: 366 DSCAGDGVESQMCN-VPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTD---CPV-DGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDC 498
+ CAG ++ CN C ++G W++W+ C T +CG G ++R+R C NPS GG C +S F C + D GF E+ + C G G ++R C QF G C G+ + C
Sbjct: 458 NRCAGQKLQRSSCNEASCSVHGNWGKWTQWTYC---TVSCGRGRKSRSRLCNNPSLQNGGNHCQGRALDST----FCSNGLCSIADYGFSEWTQWSKCSVDCIG-DRGNNVRNRFCSTSKLQFGGRNCKGSRKEKRLC 587
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Match: EMLSAG00000006961 (supercontig:LSalAtl2s:LSalAtl2s395:163241:172459:1 gene:EMLSAG00000006961 transcript:EMLSAT00000006961 description:"maker-LSalAtl2s395-augustus-gene-1.4") HSP 1 Score: 63.929 bits (154), Expect = 9.685e-11 Identity = 41/112 (36.61%), Postives = 54/112 (48.21%), Query Frame = 0
Query: 316 GNLVVLPNKVDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNVPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSC 427
N V+ V G WS W WS C CG G+Q+RTR C+ P P + G C G VE + CN CP G S W++ + C ++ R R C NP+P + G C
Sbjct: 179 SNPAVIKVYVAGAWSEWSPWSPCN---SKCGRGVQKRTRKCDSPAPINDGPGCEGPSVEKKSCNRVCPAIDGSW--SSWTAWSSCSSDC---IQFRRRGCNNPTPKYSGNYC 282
BLAST of collagen alpha-1 chain-like vs. SwissProt
Match: gi|189082691|sp|A8TX70.1|CO6A5_HUMAN (RecName: Full=Collagen alpha-5(VI) chain; AltName: Full=Collagen alpha-1(XXIX) chain; AltName: Full=von Willebrand factor A domain-containing protein 4; Flags: Precursor) HSP 1 Score: 172.555 bits (436), Expect = 3.911e-43 Identity = 116/296 (39.19%), Postives = 129/296 (43.58%), Query Frame = 0
Query: 35 CACPSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAG---------------TPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAG---VPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDD--------GGKGPNGPPGTPGTPGAQG 304
C CP G PGP G G+ +G G G G G G PG G G G G+ G PG G GL G +G G HG G G G G G+PGS G G G G G G G+N G G G G G SG G G+P S G G G G GV+G PG PG GT+GA G QG G G+ G+ G+ GS GQ G PG GA G G PG LG G G G G GQ GR GD G KG GP G PG G +G
Sbjct: 1391 CKCP----GIPGPHGTRGLQAMKGSQGLKGSRGHRGEDGNPGVRGDTGPQGDKGIAGCPGAWGQKGLKGFSGPKGGHGDDGIDGLDGEEGCHGFPGIKGEKGDPGSQGSPGSRGAPGQYGEKGFPGDPGNPGQNN--NIKGQKGSKGEQGRQGRSGQKGVQGSPSSRGSRGREGQRGLRGVSGEPGNPGPTGTLGAEGLQGPQGSQGNPGRKGEKGSQGQKGPQGSPGLMGAKGSTGRPGLLGKKGEPGLPGDLGPVGQTGQRGRQGDSGIPGYGQMGRKGVKGPRGFPGDAGQKG 1680 HSP 2 Score: 123.25 bits (308), Expect = 2.031e-27 Identity = 87/229 (37.99%), Postives = 103/229 (44.98%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQ 266
P G +G G G +G GQ G+ GS + G G G G G +G PG+PGP G G G G GS G G G G++G G GS G G G G+ GL G G G+PG GPVG G G G G P G+G G+ GV G G PG G G G G G G G G A G+ G +G+ G+PG PG G G AGQ
Sbjct: 1517 PGQNNNIKGQKGSKGEQGRQGRSGQKGVQGSPSSRGSRGREGQRGLRGVSGEPGNPGPTGTLGAEGLQGPQGSQGNPGRKGEKGSQGQKGPQGSPGLMGAKGSTGRPGLLGKKGEPGLPGDL---GPVGQTGQRGRQGDSGIP----------GYGQMGRKGVKGPRGFPGDAGQ---KGDIGNPGIPGGPGPKGFRGLALTVGLKGEEGSRGLPGPPGQRGIKGMAGQ 1729 HSP 3 Score: 101.679 bits (252), Expect = 1.045e-20 Identity = 78/211 (36.97%), Postives = 91/211 (43.13%), Query Frame = 0
Query: 23 RQGRKVEQVASQCACPSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAG---TPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIP-----GSSGPNGPVGPAGPAGTSGSVG------------------TPGNPGSGGPSGGFGAPGQAGVAGVPGVP 207
++G K EQ + G P RG G EG+ G G+ G GN GP GT GA G G G G+PG G G GQ G +PG G G+ G G G G PG G GPVGQ+G G G +GIP G G GP G G AG G +G T G G G G G PGQ G+ G+ G P
Sbjct: 1526 QKGSKGEQGRQGRSGQKGVQGSPSSRGS---RGREGQRGLRGVSGEPGNPGPTGTLGAEGLQGPQGSQGNPGRKGEKGSQGQKGPQGSPGLMGAKGSTGRPGLLGKKGEPGLPGD---LGPVGQTGQRGRQGDSGIPGYGQMGRKGVKGPRGFPGDAGQKGDIGNPGIPGGPGPKGFRGLALTVGLKGEEGSRGLPGPPGQRGIKGMAGQP 1730 HSP 4 Score: 65.0846 bits (157), Expect = 1.957e-9 Identity = 48/144 (33.33%), Postives = 60/144 (41.67%), Query Frame = 0
Query: 20 SEERQGRKVEQVASQCACPSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVP-----GSPGPPGPPGLPGQAGTPGS---------------HGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQ 143
S+ GRK E+ + P G G +G G G G+ G+ G+P G+ GP G G G G +G+P G G GP G PG AG G G+A T G G G G PG G G+ G GQ
Sbjct: 1589 SQGNPGRKGEKGSQGQKGPQGSPGLMGAKGSTGRPGLLGKKGEPGLP---GDLGPVGQTGQRGRQGDSGIPGYGQMGRKGVKGPRGFPGDAGQKGDIGNPGIPGGPGPKGFRGLALTVGLKGEEGSRGLPGPPGQRGIKGMAGQ 1729
BLAST of collagen alpha-1 chain-like vs. SwissProt
Match: gi|1076761195|sp|D3YXG0.1|HMCN1_MOUSE (RecName: Full=Hemicentin-1; AltName: Full=Fibulin-6; Short=FIBL-6; Flags: Precursor) HSP 1 Score: 148.288 bits (373), Expect = 3.443e-35 Identity = 75/176 (42.61%), Postives = 101/176 (57.39%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNV-PCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTC-FTDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDC 498
VDG WS W W +C + CG+G Q RTR C++PP HGG C G VE+ MCN+ PCP++G W WS+C + +CG G +TR R C NP P FGG C A+ ++ + C CPVDG + + + AC CG G + ++R C +PVPQ+ G +C G QSD C
Sbjct: 4584 VDGHWSEWSFWEDC---SRSCGHGNQTRTRTCSNPPAQHGGRPCEGHAVETIMCNIRPCPVHGVWNAWQPWSAC---SKSCGKGSQTRMRLCNNPPPSFGGAHCSGAE--TQMQVCNERHCPVDGRWATWSSWSAC---TVSCGGGARKRTRDCSDPVPQYGGNKCEGTGVQSDFC 4748 HSP 2 Score: 137.887 bits (346), Expect = 5.247e-32 Identity = 79/183 (43.17%), Postives = 103/183 (56.28%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNV-PCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTD-CPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDC-VETCTG 504
VDG W+ W WS C CG G ++RTR C+DP P +GG+ C G GV+S CN PCP +G + WS W +C + TC G R RTC NP P GG +C P+++ + C TD CPVDG +G + + C + CG G +T+ RLCDNPVP G C G TQ C ++ C G
Sbjct: 4698 VDGRWATWSSWSACTVS---CGGGARKRTRDCSDPVPQYGGNKCEGTGVQSDFCNSDPCPTHGNWSPWSGWGTC---SRTCNGGQMRRYRTCDNPRPSNGGRAC--GGPDTQIQRCNTDMCPVDGSWGTWHSWSHC---SVSCGGGERTRKRLCDNPVPTKGGRSCPGDATQVSRCNMQACPG 4869 HSP 3 Score: 125.561 bits (314), Expect = 4.331e-28 Identity = 72/179 (40.22%), Postives = 100/179 (55.87%), Query Frame = 0
Query: 324 KVDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMC-NVPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTC-FTDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCVE 500
+V G +S W W C CG G+Q+R+R C++PPP++GG C G E++ C N CP++G ++WS W C + +CG G +TRTRTC+NP GG C E+ C CPV G + + + AC + CG G++T+ RLC+NP P F GA C GA TQ C E
Sbjct: 4526 QVHGGFSLWSAWRPCSVT---CGKGIQKRSRLCDNPPPANGGRPCQGADSEARHCHNKLCPVDGHWSEWSFWEDC---SRSCGHGNQTRTRTCSNPPAQHGGRPCEGH--AVETIMCNIRPCPVHGVWNAWQPWSAC---SKSCGKGSQTRMRLCNNPPPSFGGAHCSGAETQMQVCNE 4693
BLAST of collagen alpha-1 chain-like vs. SwissProt
Match: gi|85542049|sp|Q96RW7.2|HMCN1_HUMAN (RecName: Full=Hemicentin-1; AltName: Full=Fibulin-6; Short=FIBL-6; Flags: Precursor) HSP 1 Score: 146.747 bits (369), Expect = 1.063e-34 Identity = 74/176 (42.05%), Postives = 101/176 (57.39%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNV-PCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTC-FTDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDC 498
VDG WS W LW EC CG G Q RTR CN+P HGG C G+ VE MCN+ PCP++G + W W +C + +CG G +TR R C NP P FGG C A+ ++ + C +CP+ G + + + AC + CG G + ++R C +PVPQ+ G +C G+ QSD C
Sbjct: 4585 VDGSWSEWSLWEEC---TRSCGRGNQTRTRTCNNPSVQHGGRPCEGNAVEIIMCNIRPCPVHGAWSAWQPWGTC---SESCGKGTQTRARLCNNPPPAFGGSYCDGAE--TQMQVCNERNCPIHGKWATWASWSAC---SVSCGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFC 4749 HSP 2 Score: 131.724 bits (330), Expect = 4.815e-30 Identity = 76/180 (42.22%), Postives = 102/180 (56.67%), Query Frame = 0
Query: 324 KVDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMC-NVPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNS-ESRTC-FTDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCVE 500
+V G +S W W C CG G+Q+R+R CN P P++GG C G +E + C N PCP++G ++WS W C T +CG G +TRTRTC NPS GG C + N+ E C CPV G + + +G C + CG GT+T++RLC+NP P F G+ C GA TQ C E
Sbjct: 4527 QVHGGFSQWSAWRACSVT---CGKGIQKRSRLCNQPLPANGGKPCQGSDLEMRNCQNKPCPVDGSWSEWSLWEEC---TRSCGRGNQTRTRTCNNPSVQHGGRPC---EGNAVEIIMCNIRPCPVHGAWSAWQPWGTC---SESCGKGTQTRARLCNNPPPAFGGSYCDGAETQMQVCNE 4694 HSP 3 Score: 131.339 bits (329), Expect = 7.000e-30 Identity = 78/183 (42.62%), Postives = 100/183 (54.64%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNV-PCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTD-CPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDC-VETCTG 504
+ G W+ W WS C CG G ++RTR C+DP P +GG C G V+S CN PCP +G + WS W +C + TC G R RTC NP P GG +C P+S+ + C TD CPVDG +G + + C + CG G KT+ RLCD+PVP G C G TQ C V+ C G
Sbjct: 4699 IHGKWATWASWSACSVS---CGGGARQRTRGCSDPVPQYGGRKCEGSDVQSDFCNSDPCPTHGNWSPWSGWGTC---SRTCNGGQMRRYRTCDNPPPSNGGRAC--GGPDSQIQRCNTDMCPVDGSWGSWHSWSQC---SASCGGGEKTRKRLCDHPVPVKGGRPCPGDTTQVTRCNVQACPG 4870
BLAST of collagen alpha-1 chain-like vs. SwissProt
Match: gi|74752071|sp|Q96P44.1|COLA1_HUMAN (RecName: Full=Collagen alpha-1(XXI) chain; Flags: Precursor) HSP 1 Score: 143.28 bits (360), Expect = 6.074e-34 Identity = 127/318 (39.94%), Postives = 150/318 (47.17%), Query Frame = 0
Query: 35 CACPSSPAGYPGPRGPAGVNG---WEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGT---PGSHGVAGTAGSFGTRGPSGTPG------------SAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSG---GPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGT---------------AGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
C CP G GP+G G+ G + G+PGQ G PG G G PG PG+ G G G+PG G PG G G G PG HG+ G+ G G +G G+PG +AG GL GP G+ G G +G G PG G G G G GT G G PG PG+ G G G PGQ G G PG+PG G+ G+ G G G G G+ G G G +G+ G GATG PG PG +G G GQ +NG G+PGQ G G G KG G G PG GA G G G G G
Sbjct: 444 CICPPGKPGLQGPKGDPGLPGNPGYPGQPGQDGKPGYQGIAGTPGVPGSPGIQGARGLPGYKGEPGRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGNAGFPGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGEIGPPGQQGKKGAPGMPGLMGSNGSPGQPGTPGSKGSKGEPGIQGMPGASGLKGEPGATGSPGEPGYMGLPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPGQQGIQGHHGAKGERGEKGEPGVRGAIGSKGESGVDGLMG 761 HSP 2 Score: 88.9669 bits (219), Expect = 5.919e-17 Identity = 75/179 (41.90%), Postives = 88/179 (49.16%), Query Frame = 0
Query: 164 PVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQ------------AAQNGIGGLPG---QPGRNGDDGGKGP---NGPPGTPGTPGAQGLNGVPGFPGFPGNLVVLPNK 324
P G G G G G PGNPG G G G PG G+AG PGVPG+ G GA G G+ G+ G+DG G G+PG G G+PGS G +G G G G GLPG +PGR+G DG G G G+PG PG G G PG PGFPGN ++ K
Sbjct: 447 PPGKPGLQGPKGDPGLPGNPGYPGQPGQDGKPGYQGIAGTPGVPGSPGIQGARGL------PGYKGEPGRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGNAGFPGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQK 619 HSP 3 Score: 86.2705 bits (212), Expect = 4.658e-16 Identity = 87/208 (41.83%), Postives = 97/208 (46.63%), Query Frame = 0
Query: 140 PVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGV---------AGVPGVPGTGGTMGASGSQGQNGPDGHDG------------KAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGG---LPGQPGRNGDDGGKGPNGPPG------TPGTPGAQGLNGVPGFPGFPGN 317
P G+ GL GP G G+PG+ G G G G G G GTPG PGS G G G PG G G+PG PG G G+ G G G G G AG G G AG PG G G+ GSPG G AG+ G Q+G G +PG PG G G KG GPPG PG PG G NG PG PG PG+
Sbjct: 447 PPGKPGLQGPKGDPGLPGNPGYPGQPGQDGKPGYQGIAGTPGVPGSPGIQGARGLPGYKGEPGRDGDKGDRGLPGFPGLHGMPGSKGEMGAKGDKGSPGFYGKKGAKGEKGNAGFPGLPGPAGEPGRHGKDGLMGSPGFKGEAGSPGAPGQDGTRGEPGIPGFPGNRGLMGQKGEIGPPGQQGKKGAPGMPGLMGSNGSPGQPGTPGS 654 HSP 4 Score: 68.9366 bits (167), Expect = 9.026e-11 Identity = 57/144 (39.58%), Postives = 67/144 (46.53%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPG 181
P G G G G+ G G PGQ G PGS G+ G PG G PG +G+ G PG G PG PG G PG G G G+ G +G G G G G+ G G G G G G G G G +G G +G G +G G
Sbjct: 624 PPGQQGKKGAPGMPGLMGSNGSPGQPGTPGSKGS---KGEPGIQGMPGASGLKGEPGATGSPGEPGYMGLPGIQGKKGDKGNQGEKGIQGQKGENGRQGIPGQQGIQGHHGAKGERGEKGEPGVRGAIGSKGESGVDGLMGPAG 764
BLAST of collagen alpha-1 chain-like vs. SwissProt
Match: gi|189082905|sp|A2AX52.2|CO6A4_MOUSE (RecName: Full=Collagen alpha-4(VI) chain; Flags: Precursor) HSP 1 Score: 136.732 bits (343), Expect = 1.032e-31 Identity = 122/288 (42.36%), Postives = 146/288 (50.69%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGE---PGQHGIPGSDGN------FGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPG-SHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNG---RNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PG RGP G G+ GE PG+ G+ G DG GP G G+ G+ G G+PG GP G PGL G G PG + + G G G RG G+PG GP+G++G GP G R+G+PG G G G GS G PG+PG GP G G PG G G PG G G G SGS+G PDG G G+ G AG+ G G QG G PG GP G G G+ + G G PG PG G+DG G G G G G +G +G PG G PG+
Sbjct: 1459 GCPGVRGPKGARGFSGEKGNPGEEGVGGLDGEQGDRGAAGPSGEKGSSGSRGLTGLPGPAGPRGEPGLRGDPGDPGIDNLIQGPKGEKGRRGHQGSPG------FHGPLGEAGSVGPRGSLGRHGLPGLKGV------LGETGELGSRGEPGHPGPQGPRGRQGPPGFFGQKGDPGTQGNPGLPGPSGSKG---PDGPRGLKGEVGPAGERGPRGQQGPRGQPGLFGPDG-HGYPGRKGRKGEPGFPGYPGVQGEDGNPGRGGEKGAKGIRGKRGNSGFPGLAGTPGD 1730 HSP 2 Score: 135.961 bits (341), Expect = 2.287e-31 Identity = 122/301 (40.53%), Postives = 146/301 (48.50%), Query Frame = 0
Query: 31 VASQCACPSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRG---PSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPV-GPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQ---NGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGT--------PGAQGLNGVPGFPGFPG 316
+ ++C G PG RG G G +G PG G G G GP G PG G G PG GP G G G+ G PG GV G G G RG PSG GS+G GL+G G +G G G G PG G + + GP G G G G+PG G G +G G G G G+PG+ G G G GS+G+ GP G G+ G G GQ G PG QG PG PGP G+ G +G GL G+ G G+ G +G GP G PG PG +G G PGFPG+PG
Sbjct: 1405 MYAKCYGDDGIRGEPGSRGEQGERGLDGLPGHPGEEGDHGQRGPRGLPG---LRGEEGCPGVRGPKGARGFSGEKGNPGEEGVGGLDGEQGDRGAAGPSGEKGSSGSRGLTGLPGPAGPRGEPGLRGDPGDPGIDNLIQGPKGEKGRRGHQGSPGFHGPLGEAGSVGPRGSLGRHGLPGLKGVLGETGELGSRGEPGHPGPQGPRGRQGPPGFFGQKGDPGTQGN---PGLPGPSGSKGP------DGPRGLKGEVGPAGERGPRGQQGPRGQPGLFGPDGHGYPGRKGRKGEPGFPGYPG 1693 HSP 3 Score: 112.079 bits (279), Expect = 6.567e-24 Identity = 102/238 (42.86%), Postives = 117/238 (49.16%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGS-DGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGP---VGQSGLAGPNGRNGIPG---SSGPNGP------VGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQA 267
G PGP GP G G G+PG GI G G G G G+PG +G G G GP G G+ G PG GV G G G+RG G PG G G GP GQ G G G G+PG S GP+GP VGPAG G G G G PG GP G G PG+ G G PG PG G G G+ G+ G G G G+ G+ +G PG G G G PG +GT G+ G A
Sbjct: 1513 GLPGPAGPRGEPGLRGDPGDPGIDNLIQGPKGEKGRRGHQGSPGFHGPLGEAGSVGPRGSLGRHGLPGLKGVLGETGELGSRGEPGHPGPQGPRGRQGPPGFFGQKGDPGTQGNPGLPGPSGSKGPDGPRGLKGEVGPAGERGPRGQQGPRGQPGLFGPD-GHGYPGRKGRKGEPGFPGYPGVQGEDGNPGRGGEKGAKGIRGKRGN---SGFPGLAGTPGDQGPPGKMGTKGSKGLA 1746 HSP 4 Score: 82.4185 bits (202), Expect = 9.579e-15 Identity = 75/186 (40.32%), Postives = 86/186 (46.24%), Query Frame = 0
Query: 133 GGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
G G+ G G G G G +G+PG G G G GP G G G G PG GP G A G +G G PG G GG G G +G GP G G +G S G G+PGP G G PG G G G N I G G+ GR G G G +GP G G+ G +G G G PG G L
Sbjct: 1411 GDDGIRGEPGSRGEQGERGLDGLPGHPGEEGDHGQRGPRGLPGLRGEEGCPGVRGPKG---ARGFSGEKGNPGEEGVGGLDGEQGDRGAAGPSGEKGSSG---SRGLTGLPGPAGPRGEPGLRGDPGDPGI-----DNLIQGPKGEKGRRGHQGSPGFHGPLGEAGSVGPRGSLGRHGLPGLKGVL 1585
BLAST of collagen alpha-1 chain-like vs. SwissProt
Match: gi|189082902|sp|A6NMZ7.2|CO6A6_HUMAN (RecName: Full=Collagen alpha-6(VI) chain; Flags: Precursor) HSP 1 Score: 129.028 bits (323), Expect = 2.952e-29 Identity = 98/300 (32.67%), Postives = 114/300 (38.00%), Query Frame = 0
Query: 76 GTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSG----GPSG---------------------------GFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDG------------------------HDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIG--GLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
G+ G LG G G G+PGP G+ GT G +G G G+ G G G G G GL+G G +GL G G G GS G G G G G G G PG PG GP+G G G G G G+PG G G+ G +G GP G G G+ GS G G PG G G G PGP G G G +G G GQ G G+ G KG G PG PG G +G G G PG +
Sbjct: 1413 GSEGYLGEEGIAGERGAPGPV------GEQGTKGCYGTKGPKGNRGLNGQEGEVGENGIDGLNGEQGDNGLPGRKGEKGDEGSQGSPGKRGTPGDRGAKGLRGDPGAPGVDSSIEGPTGLKGERGRQGRRGWPGPPGTPGSRRKTAAHGRRGHTGPQGTAGIPGPDGLEGSLGLKGPQGPRGEAGVKGEKGGVGSKGPQGPPGPGGEAGNQGRLGSQGNKGEPGDLGEKGAVGFPGPRGLQGNDGSPGYGSVGRKGAKGQEGFPGESGPKGEIGDPGGPGETGLKGARGKMISAGLPGEM 1706 HSP 2 Score: 120.553 bits (301), Expect = 1.339e-26 Identity = 97/318 (30.50%), Postives = 119/318 (37.42%), Query Frame = 0
Query: 61 GQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGI---PGSSGPNGPV-GPAG------------------PAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGAS------------------------GSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGT---------------------PGAQGLNGVPGF 311
G G G +G G G PG +G GT G G+ GP G GL GQ G G +G+ G G G G G G G G G G+ G G G G+ PG+ G + + GP G G+ G G GP G G PG G+ G G+ G G G + G+QG+ G G+ G+ G G G G PGP+G G GSPG G+ G G Q G G G G GD GG G G G G G +G G+ F
Sbjct: 1413 GSEGYLGEEGIAGERGAPGPVGEQGTKGCYGTKGPKGNRGLNGQEGEVGENGIDGLNGEQGDNGLPGRKGEKGDEGSQGSPGKRGTPGDRGAKGLRGDPGAPGVDSSIEGPTGLKGERGRQGRRGWPGPPGTPGSRRKTAAHGRRGHTGPQGTAGIPGPDGLEGSLGLKGPQGPRGEAGVKGEKGGVGSKGPQGPPGPGGEAGNQGRLGSQGNKGEPGDLGEKGAVGFPGPRGLQGNDGSPG-YGSVGRKGAKGQEGFPGESGPKGEIGDPGGPGETGLKGARGKMISAGLPGEMGSPGEPGPPGRKGVKGAKGLASF 1729 HSP 3 Score: 108.997 bits (271), Expect = 4.940e-23 Identity = 99/270 (36.67%), Postives = 118/270 (43.70%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGI---------------PGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPP----------------------------GLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGN---PGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQ 266
G GP+G G+NG EGE G++GI G G+ G G+PG GTPG G G G PG P G PG +HG G G GT G G G G GL GP G G AG G G GS GP GP GP G AG G +G+ GN PG G G G PG G+ G G PG GS G+ G G +G G+ G G+ G PG G TG+ G+ G + +AG G+
Sbjct: 1443 GTKGPKGNRGLNGQEGEVGENGIDGLNGEQGDNGLPGRKGEKGDEGSQGSPGKRGTPGDRGAKGLRGDPGAPGVDSSIEGPTGLKGERGRQGRRGWPGPPGTPGSRRKTAAHGRRGHTGPQGTAGIPGPDGLEGSLGLKGPQGPRGEAGVKGEKGGVGSKGPQGPPGPGGEAGNQGRLGSQGNKGEPGDLGEKGAVGFPGPRGLQGNDGSPGY-------GSVGRKGAKGQEGFPGESGPKGEIGDPGGPGETGLKGARGKMISAGLPGE 1705 HSP 4 Score: 92.4337 bits (228), Expect = 7.528e-18 Identity = 86/251 (34.26%), Postives = 104/251 (41.43%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPG---SDGNFGPPGTPG-------------------------------------ALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTP--GNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGV 251
G PG +G G G +G PG+ G PG + G G PG PG A G G G G+ G PGP GL G G G G G AG G +G G+ G G G G G G G G G PG G G VG GP G G+ G+P G+ G G G G PG++G G G PG G G G++G+ G G+ G G G G G +GA G+
Sbjct: 1476 GLPGRKGEKGDEGSQGSPGKRGTPGDRGAKGLRGDPGAPGVDSSIEGPTGLKGERGRQGRRGWPGPPGTPGSRRKTAAHGRRGHTGPQGTAGIPGPDGLEGSLGLKGPQGPRGEAGVKGEKGGVGSKGPQGPPGPGGEAGNQGRLGSQGNKGEPGDLGEKGAVGFPGPRGLQGNDGSPGYGSVGRKGAKGQEGFPGESGPKGEIGDPGGPGETGLKGARGKMISAGLPGEMGSPGEPGPPGRKGVKGAKGL 1726 HSP 5 Score: 62.7734 bits (151), Expect = 1.043e-8 Identity = 53/165 (32.12%), Postives = 63/165 (38.18%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEG------------------------------EPGQHGIPGSDGNFGPPG---TPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGP---------NGRNGIPGSSG 160
P AG PGP G G G +G E G G GS GN G PG GA+G PG G+ G+ G PG G G+ G G G G +G G G G PG G G G + +GL G GR G+ G+ G
Sbjct: 1562 PQGTAGIPGPDGLEGSLGLKGPQGPRGEAGVKGEKGGVGSKGPQGPPGPGGEAGNQGRLGSQGNKGEPGDLGEKGAVGFPGPRGLQGNDGSPGY-GSVGRKGAKGQEGFPGESGPKGEIGDPGGPGETGLKGARGKMISAGLPGEMGSPGEPGPPGRKGVKGAKG 1725
BLAST of collagen alpha-1 chain-like vs. SwissProt
Match: gi|290457636|sp|Q17RW2.2|COOA1_HUMAN (RecName: Full=Collagen alpha-1(XXIV) chain; Flags: Precursor) HSP 1 Score: 128.257 bits (321), Expect = 4.754e-29 Identity = 125/321 (38.94%), Postives = 147/321 (45.79%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGT---AGSFGTRGPSGTPGSAG---GSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGS----------------GGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQ---------------PGRNGDDGGKGPNGPPGTPGTPGA---------QGLNGVPGFPGFPGN 317
G PG G G +G +G PG G+PG DG G G PG +G G +G G PGP G G+PGQ G PG G G G G+RGP G G +G G G VG GL GP+G GIPG G G GP+G G G G PG + G G GA G G GVPG+ G G G G G G G G+ G +G+ G+ G PGP G G+PG G LG G G +GI G PG+ PGR G G GP G G+ G PG+ QGL G PG G G+
Sbjct: 1050 GAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGH 1370 HSP 2 Score: 120.939 bits (302), Expect = 1.001e-26 Identity = 129/343 (37.61%), Postives = 149/343 (43.44%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGT---PGSHGVAGTAGSF------GTRGPSGTPGSAGGS---------------------------GLSGPV---GQSGLAGPNGRNGIPGSS---GPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGV------PGVPGTGGTMGASGSQGQNGPDGHDGKAGQD-------------------GSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
P G G G G G++G+PG G+PGS G+ G PG PG G G G PG G GPPG G++G PG+ G GTAGS G RG G PG G G+ GP+ GQ+GL GP G GIPG G G G GP G GS G PG G GP G G G G G+ PG+PG G G G G GP G G G+D G G+ G G +G GVPG G G G G+ G GL G+ G G+ G KG GP G PG PG QGL G G G+ G
Sbjct: 955 PHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHG 1297 HSP 3 Score: 117.857 bits (294), Expect = 9.674e-26 Identity = 123/318 (38.68%), Postives = 145/318 (45.60%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGS---DGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGL----------------------SGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQ---GATGVPGSPGPLGTAGTAGQAAQNGI------GGLPGQP------GRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
S G PGP G G+ G G PG+ G G G G G PG +G G G G+ G G GL G G P G+ G G G GPSG PG G G G G+ G G G G+PG G G GP G G G G G GS G G GAPG +G PG+PG G +G G QG +G DG G G+ G G+ G+PG + G TG+ G+PGP G G++G GI GLPGQP G G G +GP G PG G PG G+ G+ GF GFPG
Sbjct: 1094 SGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEP---GIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGP---SGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFPG 1405 HSP 4 Score: 114.39 bits (285), Expect = 9.392e-25 Identity = 115/275 (41.82%), Postives = 134/275 (48.73%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G+ G RGP G G +G Q G G DG G G GA G G G G G G G PG+ G G G+ G GS G RG G PG G G GP G+ G+ GP G G SG G G G GT+GSVG G PG G GAPG+ G+ G G+ G G G G G+ G G G G G +GQ G+PGP+G G+PG G G G GQ G G G PG+ G G KG G G G G G +G PG PG+ G+
Sbjct: 909 GHVGARGPPGSQGPKG---QRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEG---ESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEP---GAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGH 1174 HSP 5 Score: 110.153 bits (274), Expect = 2.406e-23 Identity = 119/299 (39.80%), Postives = 142/299 (47.49%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAG---------------------------TPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
GP GPAG+ G G G G+PG G+ G GT G LG PG G G+ G PGPPG+ G++G PG +G G G G RGP G PG G G GP+G G GP G+ G G G GP G G VG GN G G +G G PG+ G+ G G G G+ G G QG+ G G+ G G G G G+PG GA G PGS GP G G+ G G G+ G G GD G +GP+G G G PG +G G PG G PG+
Sbjct: 690 GPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGK------PGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGS 982 HSP 6 Score: 108.997 bits (271), Expect = 4.876e-23 Identity = 118/317 (37.22%), Postives = 139/317 (43.85%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPG---------------------LPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNG---RNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPG---------------TGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPG---------PQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQ---PGRNGDDGGKGPNGPPGTPGTPGAQGLNG 307
GY G GP G+ G G+ G G G G G PG G G+ G G GSPGP GP G LPG G G G G G G+RGP G G G G G G G GP+G + G PG G G G G G++G G PG PG G G G PG+ G+ G PG G T G++G +G G G G G+ G G G GVPG +G G+PG GPLG +G G GI G+PGQ PG+ GD G GP G G+ G PG G +G
Sbjct: 827 KGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIVGIPGQRGRPGKKGDKGQIGPTGEVGSRGPPGKIGKSG 1143 HSP 7 Score: 107.071 bits (266), Expect = 2.277e-22 Identity = 115/293 (39.25%), Postives = 135/293 (46.08%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPP----------------------GTPGTPGAQGLNGVPGFPGFPG 316
G RGP G+ G G PG+ G G G G PG+ G G PG G+ G G GPPG G G PG+ G +G G G +G GT GS GG+G G G+ G G G G G G G G G G G +G PG G G SG G PG G+ G+PG G G G +GQ GP G+ G G G+ G GP+GA G G+ G LG G G+ G G GQPG +G G KG G P G G PGA+G G G PG G
Sbjct: 951 GKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPLGRSGQTGLPGPEGIV---GIPGQRGRPGKKGDKGQIGP---TGEVGSRGPPGKIGKSGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGLRG 1237 HSP 8 Score: 105.531 bits (262), Expect = 5.381e-22 Identity = 109/283 (38.52%), Postives = 125/283 (44.17%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEG----------------EPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNG 307
P+G PGP+G G G + + G+ G PG++G G +G PG G G GPPG PG G+ G G G G G G GPSG PG G GL GP G G G +G +G PG GP G G G G G G G PG G G G PG G+ G G G G G G +G G G G G G GQ G G QG TG G PGP G G AG +G G G G G G +G GP G G G +G G
Sbjct: 1180 PSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEG------YKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIGPTGRTGPRGEKGFRG 1456 HSP 9 Score: 102.834 bits (255), Expect = 4.271e-21 Identity = 120/300 (40.00%), Postives = 132/300 (44.00%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGS----------PGP------PGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPV------GQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGN---PGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDD---GGKGPNGPPGTPGTPGAQGLNGVPG 310
S P G G RG G G G G+ GIPG G+ G PG G G G G PG G G G PG G G GV G G+ G +GP G PG G GL G G+ G GP+G+ GIPG G GP G G G G G PG PG G G G PG+ G+AG PG PG G+ G GS G GP G G GQ G G+ G G QG G G PG G G G G G PG G GD G GP GP G G G G G+ G
Sbjct: 1142 SGPKGARGTRGAVGHLGLMGPDGEPGIPGYRGHQGQPGPSGLPGPKGEKGYPGEDSTVLGPPGPRGEPGPVGDQGERGEPGAEGYKGHVGVPGLRGATGQQGPPGEPGDQGEQGLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSPGIQGPKGEQGLPGQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIG 1441 HSP 10 Score: 101.293 bits (251), Expect = 1.249e-20 Identity = 115/291 (39.52%), Postives = 131/291 (45.02%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPG------------SAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGV---PGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
G GP G G G G+PGQ G G PG G G G G G G GP GLPG+ G GS G G GS G GP G G G GL G VG G G G G GS GP+G +G G G G G G G G G G PG+ G G PG+ G G+ G G G+ G G G G G G G PG +G +G+ PG+ G +GTAG+ G + G+ G PG PG G G G G PG G PG G G G PG G L
Sbjct: 807 GEEGPIGAFGELGPRGKPGQKGYAGE------PGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPGGRGLPGEDGEKGEMGLPGIIGPL 1091 HSP 11 Score: 100.908 bits (250), Expect = 1.496e-20 Identity = 107/248 (43.15%), Postives = 120/248 (48.39%), Query Frame = 0
Query: 73 GPPGTPGALGTPGTNGVPGSPGPPGPPGL-PGQ--AGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
GP G PG G PG G+PG GP G PG PGQ G G G++G G G +G G G G GL G G G AG G G PG G GP G GP G G +G+PG G GP G G+PG G G G QG G G G AG DGS G G GP G G+ GS GP+G G AG G+ G G PG GD G +G G G PG PG +G G+PG PG G
Sbjct: 513 GPRGIPGPHGNPGLPGLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPE------------GERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGK 748 HSP 12 Score: 98.5969 bits (244), Expect = 7.837e-20 Identity = 97/230 (42.17%), Postives = 120/230 (52.17%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGW---EGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPG---SHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQ 266
G PGP+GP G G+ + PG+ G G G GPPG G G G G+PG PG G PG G G+PG G+AG G+ G +G G GS G +G GP G+ G+ G G+ G G G G G GPAG GS G G G G G G+ G G G G+PG MG SG++G G G G+ G G G+ G PG +GA G+PG PG G +G +GQ
Sbjct: 528 GLPGPKGPKGDPGFSPGQPVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGP---MGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQ 754 HSP 13 Score: 97.4413 bits (241), Expect = 1.725e-19 Identity = 119/283 (42.05%), Postives = 132/283 (46.64%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPG---PPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGA---SGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
P G G +G G G G PG+ GIPG GN G PG PG G G G PG G G PG GQ G G G+ G G G +G G PG G G +G G GL G G G PG G GPVGP GPAG G +G GN G G G G G AG G PG PG G +G G +G++GP G G G G +G G G G G+PG GP G G G G GL G G G G G GP G PG G G G G G G+
Sbjct: 562 PPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPPGPEGFPGDIGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQKGYAGEPGPEGLKGEVGD 844 HSP 14 Score: 96.2857 bits (238), Expect = 5.080e-19 Identity = 116/331 (35.05%), Postives = 134/331 (40.48%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGA------------------------------LGTPGTNGVPGSPGPPGPPGLPGQA------GTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGA------------------PGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
G PG +G G G GE G+ G PG G G PG PG +G PG N GP GP GL G G G+ G G G+FG GP G PG G +G GP G G G G G G +GP G G G G+ G G G+PG GP G G PG G G PG G G G+ G G G G G G+ G G+ G G G TG PG G G G G G GLPG+PG G G GP G G G PG +G +G+ G PG G++
Sbjct: 707 KGLPGIKGDKGEQGTAGELGEPGYPGDKGAVGLPGPPGMRGKSGPSGQTGDPGLQGPSGPPGPEGFPGDIGIPGQN------GPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQGAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDV 1031 HSP 15 Score: 93.2041 bits (230), Expect = 3.802e-18 Identity = 90/210 (42.86%), Postives = 103/210 (49.05%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPG---QHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGAT 249
G G RG G G +G PG + GIPG G GP G G G G +G PG GPPG GLPG G PG G+AG G G +G SG PGS G+ GP G+ GL G+ GI G G G G GP G G G PG G G +G G PG G G G+ G G G G +G GP G +G G G G G G +G T
Sbjct: 1255 GLKGERGSEGNKGKKGAPGPSGKPGIPGLQGLLGPKGIQGYHGADGISGNPGKIGPPGKQGLPGIRGGPGRTGLAGAPGPPGVKGSSGLPGSP---GIQGPKGEQGLP---GQPGIQGKRGHRGAQGDQGPCGDPGLKGQPGEYGVQGLTGFQGFPGPKGPEGDAGIVGISGPKGPIGHRGNTGPLGREGIIGPTGRTGPRGEKGFRGET 1458 HSP 16 Score: 91.6633 bits (226), Expect = 1.239e-17 Identity = 114/296 (38.51%), Postives = 129/296 (43.58%), Query Frame = 0
Query: 63 HGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQ---AGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTS------------------GSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGA------TGVPGSP---------GPLGTAGTAGQAAQNGIGGLPGQPGRNGD------DGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
GIPG +G GP G G G PG G+ G+ G GP G G+ G PG G AG G G +G G G+ G G +GPVG G G G G G G GP+GP G G G VG G PGS GP G G+ G G+ G G+ G G G QG+ GP G GK G G G G PG QG G+PG P GP G G G G GL G+PG GD GG G G G PG PG +GL G G G PG
Sbjct: 776 IGIPGQNGPEGPKGLLGNRGPPGPPGLKGTQGEEGPIGAFGELGPRGKPGQKGYAGEPGPEGLKGEVGDQGNIGKIGETGPVGLPGEVGMTGSIGEKGERGSPGPLGPQGEKGVMGYPGPPGVPGPIGPLGLPGHVGARGPPGSQGPKGQRGSRGPDGLLGEQGIQ---GAKGEKGDQGKRGPHGLIGKTGNPGERGFQGKPGLQGLPGSTGDRGLPGEPGLRGLQGDVGPPGEMGMEGPPGTEGESGLQGEPGAKGDVGTAGSVGGTGEPGLRGEPGAPGEEGLQGKDGLKGVPG 1068 HSP 17 Score: 75.485 bits (184), Expect = 1.117e-12 Identity = 88/212 (41.51%), Postives = 98/212 (46.23%), Query Frame = 0
Query: 122 TRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPV-GPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDG---SAGQAGVPGPQGATGVPGSPGPLGTAGTA---GQAAQNGIGGLPGQPG---------RNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
RGP G PG G GL G L GP G G PG S P PV G G G SG +G PG G G G G PG G G+PG G G+ G G QG GP+G+ G G G S G+AG GP+G G+PG G G G G G GL G PG G G GP GP G G PG GL+G G PG G+
Sbjct: 511 KRGPRGIPGPHGNPGLPG------LPGPKGPKGDPGFS-PGQPVPGEKGDQGLSGLMGPPGMQGDKGLKGHPGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQLGPEGERGIPGIRGKKGFKGRQGFPGDFGDRGPAGLDGSPGLVGGTGPPGFPGLRGSVGPVGPIGPAGIPGPMGLSGNKGLPGIKGD 715 HSP 18 Score: 60.077 bits (144), Expect = 6.026e-8 Identity = 68/156 (43.59%), Postives = 72/156 (46.15%), Query Frame = 0
Query: 160 GPNGPVGPAGPAGTSGSVGTPGNPGSGGPSG--GFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPG 313
G GP G GP G G PG PG GP G GF +PGQ V G G G G MG G QG G GH G G G+ G+PG G G PG PG G AG G G G G PG G GP G G PG G +G G GFPG
Sbjct: 510 GKRGPRGIPGPHGNP---GLPGLPGPKGPKGDPGF-SPGQP-VPGEKGDQGLSGLMGPPGMQGDKGLKGH---PGLPGLPGEQGIPGFAGNIGSPGYPGRQGLAGPEGNPGPKGAQGFIGSPGEAGQ---LGPEGERGIPGIRGKKGFKGRQGFPG 654
BLAST of collagen alpha-1 chain-like vs. SwissProt
Match: gi|82234134|sp|Q641F3.1|COLA1_XENLA (RecName: Full=Collagen alpha-1(XXI) chain; Flags: Precursor) HSP 1 Score: 127.102 bits (318), Expect = 8.216e-29 Identity = 127/318 (39.94%), Postives = 149/318 (46.86%), Query Frame = 0
Query: 35 CACPSSPAGYPGPRG---------------PAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVP------GVPGTGGTMGASGSQGQNGPDGHDGK---------AGQDGSAGQAGVPGPQGATGVPGSPGP------LGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
C CP G PGP+G P G +G++G G GIPGS G GP G G G G +G G G PG PGL GQ G G G G G G G GT G GG+G +G G+ G G G++GIPG G G G GP G G G PG PG G G G G+ G++G P G PG G G SG QG GP G+ G+ AG G G+ G+PG QG TG+PG GP LG G G ++G G+PG G +G G KG G G G G G G PG G G
Sbjct: 444 CICPPGEKGDPGPKGDSGQPGNPGSPGQPGPDGKHGFQGTSGSPGIPGSPGVQGPRGFAGLKGNTGQDGEKGDRGMPGFPGLHGQPGIKGEMGPKGDKGDIGIDGKKGTKGDKGGNGATGKPGRHGEPGSYGKDGIPGYPGQKGEEGKPGPPGMEGLRGLPGIPGIPGNDGANGLKGETGLSGEPGARGPTGTPGISGPEGISGPQGPVGPKGNKGETGPPGKASPAGMKGEKGEMGIPGQQGYTGIPGLMGPKGDKGNLGERGMQGHKGEHGSSGMPGLKGEHGVTGSKGEKGEIGEHGHRGITGPRGEPGNMGLIG 761 HSP 2 Score: 125.946 bits (315), Expect = 1.611e-28 Identity = 121/301 (40.20%), Postives = 138/301 (45.85%), Query Frame = 0
Query: 37 CPSSPAGYPGPRGPAGVNGWEGE------------PGQHGIPGSDGNFGPPGTPG------------------ALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNG 307
P SP G GPRG AG+ G G+ PG HG PG G GP G G A G PG +G PGS G G PG PGQ G G G G G G G G PG+ G +GL G G SG G G G PG SGP G GP GP G G+ G G PG P+G G G+ G+ G G G G MG G +G G G G G+ GS +G+PG +G GV GS G G G G G G PG G G G +G +G GT G PG +G G
Sbjct: 489 IPGSP-GVQGPRGFAGLKGNTGQDGEKGDRGMPGFPGLHGQPGIKGEMGPKGDKGDIGIDGKKGTKGDKGGNGATGKPGRHGEPGSYGKDGIPGYPGQKGEEGKPGPPGMEGLRGLPGIPGIPGNDGANGLKGETGLSGEPGARGPTGTPGISGPEGISGPQGPVGPKGNKGETGPPGKASPAGMKGEKGEMGIPGQQGYTGIPGLMGPKGDKGNLGERGMQGHKGEHGS---SGMPGLKGEHGVTGSKGEKGEIGEHGHRGITGPRGEPGNMGLIGAPGPRGMSGERGTQGLPGPKGQQG 785 HSP 3 Score: 113.235 bits (282), Expect = 1.814e-24 Identity = 96/228 (42.11%), Postives = 112/228 (49.12%), Query Frame = 0
Query: 58 GEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDD 285
G+PG+HG PGS G G PG PG G G PG PG G GLPG G PG+ G G G G G G G G G+SGP G SG GP G G G +GP G PAG G G +G PG G G G G G G G G+ G G G+SG G G G G G+ G G+ G G G G PG+ G +G G G + + G GLPG G+ G +
Sbjct: 563 GKPGRHGEPGSYGKDGIPGYPGQ---KGEEGKPGPPGMEGLRGLPGIPGIPGNDGANGLKGETGLSGEPGARGPTGTPGISGPEGISGPQGPVGPKGNKGETGPPGKASPAGMKGEKGEMGIPGQQGYTGIPGLMGPKGDKGNLGERGMQGHKGEHGSSGMPGLKGEHGVTGSKGEKGEIGEHGHRGITGPRGEPGNMGLIGAPGPRGMSGERGTQGLPGPKGQQGKE 787 HSP 4 Score: 107.457 bits (267), Expect = 1.236e-22 Identity = 109/259 (42.08%), Postives = 125/259 (48.26%), Query Frame = 0
Query: 60 PGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
PG+ G PG G+ G PG PG+ G PG +G G G G PG+PG G G G AG G+ G G G G G GL G G G GP G G G G G G G G +G G G PGS G G G PGQ G G PG PG G G G G G DG +G G+ G +G+ PG +G TG PG GP G +G G G G G PG+ G KG G G PG G G+ G+ G G GNL
Sbjct: 448 PGEKGDPGPKGDSGQPGNPGSPGQPGPDGKHGFQGTSGSPGIPGSPGVQGPRGFAGLKGNTGQDGEKGDRGMPGFPGLHGQPGIKGEMGPKGDKGDIGIDGKKGTKGDKGGNGATGKPGRHGEPGSYGKDGIPGYPGQKGEEGKPGPPGMEGLRGLPGIPGIPGNDGANGLKGETGLSGE---PGARGPTGTPGISGPEGISGPQGPVGPKGNKGETGPPGKASPAGMKGEKGEMGIPGQQGYTGIPGLMGPKGDKGNL 703 HSP 5 Score: 97.4413 bits (241), Expect = 1.320e-19 Identity = 120/324 (37.04%), Postives = 138/324 (42.59%), Query Frame = 0
Query: 43 GYPGPRG------PAGVNGWEGEPGQHGIPGSDGN---------FGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGS---GLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQ-------AGVPG------------------------------PQGATGVPGSPGPLGTAGTAGQAAQNGI---GGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGV 308
GYPG +G P G+ G G PG GIPG+DG G PG G GTPG +G G GP GP G G G G G A AG G +G G PG G + GL GP G G G G G G G +G G G G +GS G G G G G G G+ G G+ G PG G G G+QG GP G GK + Q A +P P+G G PG PG G +G GQ GI GLPG+PG G+ G P GP G+PG PG GL GV
Sbjct: 581 GYPGQKGEEGKPGPPGMEGLRGLPGIPGIPGNDGANGLKGETGLSGEPGARGPTGTPGISGPEGISGPQGPVGPKGNKGETGPPGKASPAGMKGEKGEMGIPGQQGYTGIPGLMGPKGDKGNLGERGMQGHKGEHGSSGMPGLKGEHGVTGSKGEKGEIGEHGHRGITGPRGEPGNMGLIGAPGPRGMSGERGTQGLPGPKGQQGKEQSEAFIRQICLDVLKAQLPSLIQNDIRQNCNQCKTQEGSPGLPGPPGPVGPEGTRGHPGLPGRNGFSGLVGQPGLPGIPGTKGLPGKPGAKGNKGDIEP-GPQGSPGVPGPAGLPGV 903 HSP 6 Score: 68.9366 bits (167), Expect = 9.748e-11 Identity = 96/275 (34.91%), Postives = 111/275 (40.36%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGE---PGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGP--------------VGPAGPAGTSGSV-----------------------------GTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASG--------SQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGT 263
G PG PAG+ G +GE PGQ G G G GP G G LG G G G G G PGL G+ G GS G G G G RG +G G G GL G G G++G G G+PG G G + P+ + G PG PG G SG G PG G+ G G+PG G G G S G GP G G G+DG G G PG +G G PG+ GP G AG
Sbjct: 662 GPPGKASPAGMKGEKGEMGIPGQQGYTGIPGLMGPKGDKGNLGERGMQGHKGEHGSSGMPGLKGEHGVTGSKGEKGEIGEHGHRGITGPRGEPGNMGLIGAPGPRGMSGERGTQGLPGPKGQQGKEQSEAFIRQICLDVLKAQLPSLIQNDIRQNCNQCKTQEGSPGLPGPPGPVGPEGTRGHPGLPGRNGFSGLVGQPGLPGIPGTKGLPGKPGAKGNKGDIEPGPQGSPGVPGPAGLPG-VGKDGRTGPLGPPGREGDRGPPGTQGPPGDAGI 935
BLAST of collagen alpha-1 chain-like vs. SwissProt
Match: gi|81999970|sp|Q5UPS7.1|COLL4_MIMIV (RecName: Full=Collagen-like protein 4) HSP 1 Score: 122.094 bits (305), Expect = 2.709e-27 Identity = 103/299 (34.45%), Postives = 130/299 (43.48%), Query Frame = 0
Query: 26 RKVEQVASQCACP-------SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
+ ++ +C C G+ G RG G G +GE G +G G G G G+ G+ G G NG GS G G G G G G +FG++G G GS G G+ G G G G PG+ G NG G G G+ G +GT G+ G G G G G G G G+ GT G G+ G G G DG G G G+ G +G G G G+ G G GT G G GI G+ G +GD G KG +G G G G +G G+ G G GN
Sbjct: 50 KNSNRIFYKCGCNWLLTGTIMGDNGFIGLRGSKGDTGNKGEIGDNGENGDIGQIGDNGSIGSKGIKGMNGFNGSKGIKGDKGTDGIKGDKGQD-------NFGSKGQKGETGSKGDDGIKGITGSKGFKGD------PGTKGENGINGTKGLKGSQGDLGTKGDDGIKGIIGSKGIKGDPGNKGEDGIKGTNGLKGSKGETGSKGDDGTKGITGLKGTKGNSGSKGDDGDKGIQGLKGEFGTKGNVGDKGDTGI---NGEKGSDGDKGNKGLDGIKGDLGDDGIKGDKGIKGLKGDTGN 332 HSP 2 Score: 119.398 bits (298), Expect = 1.717e-26 Identity = 111/320 (34.69%), Postives = 138/320 (43.12%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDG--------NFGPPGTPGALGTPGTNGVPG---SPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTA---------------------------GTAGQAAQNGIGGLPGQPGRNGDDGGKGP------NGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
G G +G G+NG+ G G G G+DG NFG G G G+ G +G+ G S G G PG G+ G G+ G+ G+ G GT+G G G G G+ G G G G G NG+ GS G G G G G +G GT GN GS G G G G+ G G G G G +G G+ G DG G G DG G G G +G G+ G G G + G+ G++ GI GL G G GD G KG G G G+ G +GL V G GF G+L
Sbjct: 107 GSIGSKGIKGMNGFNGSKGIKGDKGTDGIKGDKGQDNFGSKGQKGETGSKGDDGIKGITGSKGFKGDPGTKGENGINGTKGLKGSQGDLGTKGDDGIKGIIGSKGIKGDPGNKGEDGIKGTNGLKGSKGETGSKGDDGTKGITGLKGTKGNSGSKGDDG---DKGIQGLKGEFGTKGNVGDKGDTGINGEKGSDGDKGNKGLDGIKGDLGDDGIKGDKGIKGLKGDTGNSDKGDKGSKGDSNFSKGGIGDKGSKGDNGSKGESGDKGIFGLKGSKGDIGDKGEKGDLGDTGLKGSKGLKGSKGDKGLVNVKGENGFVGDL 423 HSP 3 Score: 110.153 bits (274), Expect = 1.393e-23 Identity = 103/286 (36.01%), Postives = 124/286 (43.36%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGT-----PGSAGGSGLS-GPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQA---AQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
G G +G G +G +G+ G GI G G FG G G G G NG GS G G GL G G G G+ G G G +G +G GS G S S G +G G G NG G G G G G G G G G G+ G G G G+ G G+ V G G G +G+ GS+G G G G G G G GV G +G G G G +G G G NG G+ G GD G KG G G T G +G G+ G G G++
Sbjct: 246 KGITGLKGTKGNSGSKGDDGDKGIQGLKGEFGTKGNVGDKGDTGINGEKGSDGDKGNKGLDGIKGDLGDDGIKGDKGIKGLKGDTGNSDKGDKGSKGDSNFSKGGIGDKGSKGDNGSKGESGDKGIFGLKGSKGDIGDKGEKGDLGDTGLKGSKGLKGSKGDKGLVNVKGENGFVGDLGSKGSKGDKGESGDKGDIGIKGDKGAKGVTGDKGDKGTKGFIGNVGFKGDTGDKGIIGDNGSKGIKGSSNNKGDKGDKGNTGDKGITNTKGIKGDKGIKGSKGDLGSV 531 HSP 4 Score: 108.612 bits (270), Expect = 3.923e-23 Identity = 103/304 (33.88%), Postives = 130/304 (42.76%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTG---------------------GTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGV------PGFPGFPGNL 318
G PG +G G+NG +G + GS G+ G G G G G+ G+ G PG G G+ G G GS G G+ G GT+G +G G+ G SG G G G+ G G G G+ G G G G G+ G G G G G G G G G+ G+ G G G+ G +GS+G++G G G G G G G G G TG+ GS G G+ G G G G G G G G KG +G G G G +G GV G GF GN+
Sbjct: 171 KGDPGTKGENGINGTKG------LKGSQGDLGTKGDDGIKGIIGSKGIKGDPGNKGEDGIKGTNGLKGSKGETGSKGDDGTKGITGLKGTKGNSGSKGDDGDKGIQGLKGEFGTKGNVGDKGDTGINGEKGSDGDKGNKGLDGIKGDLGDDGIKGDKGIKGLKGDTGNSDKGDKGSKGDSNFSKGGIGDKGSKGDNGSKGESGDKGIFGLKGSKGDIGDKGEKGDLGDTGLKGSKGLKGSKGDKGLVNVKGENGFVGDLGSKGSKGDKGESGDKGDIGIKGDKGAKGVTGDKGDKGTKGFIGNV 468 HSP 5 Score: 103.605 bits (257), Expect = 1.346e-21 Identity = 101/275 (36.73%), Postives = 119/275 (43.27%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSG-SVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
G G G G NG +G G+ G G D G G G GT G +G G G G GL G+ GT G+ G G G G +G G G+ G G+ G +G G+ G G G+ G +G N G G G S S G G+ GS G +G G G G+ G+ G G G G G G G G G G G G V G G G GS G G G +G GI G G G GD G KG G G G G G G+ G G G
Sbjct: 217 GNKGEDGIKGTNGLKGSKGETGSKGDD---GTKGITGLKGTKGNSGSKGDDGDKGIQGLKGEFGTKGNVGDKGDTGINGEKGSDGDKGNKGLDGIKGDLGDDGIKGDKGIKGLKGDTG-NSDKGDKGSKGDSNFSKGGIGDKGSKGDNGSKGESGDKGIFGLKGSKGDIGDKGEKGDLGDTGLKGSKGLKGSKGDKGLVNVKGENGFVGDLGSKGSKGDKGESGDKGDIGIKGDKGAKGVTGDKGDKGTKGFIGNVGFKGDTGDKGIIGDNGSKG 487 HSP 6 Score: 102.449 bits (254), Expect = 3.617e-21 Identity = 109/303 (35.97%), Postives = 130/303 (42.90%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPG---------LPGQAGTPGS------HGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGT--PGNPGSGGPS----GGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATG---VPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVVL 321
G G +G G G +G+ G GI GS G G PG G G GTNG+ GS G G G L G G GS G+ G G FGT+G G G +G++G G G G G +GI G G +G G G G G G G+ GS G S GG G G G G G G G G GS+G G G G G G G G+ G +G G V G G +G G+ G G G G G GD G KG G G GT +G G GF G G+ ++
Sbjct: 184 GTKGLKGSQGDLGTKGDDGIKGIIGSKGIKGDPGNKGEDGIKGTNGLKGSKGETGSKGDDGTKGITGLKGTKGNSGSKGDDGDKGIQGLKGEFGTKGNVGDKGD---TGINGEKGSDGDKGNKGLDGIKGDLGDDGIKGDKGIKGLKGDTGNSDKGDKGSKGDSNFSKGGIGDKGSKGDNGSKGESGDKGIFGLKGSKGDIGDKGEKGDLGDTGLKGSKGLKGSKGDKGLVNVKGENGFVGDLGSKGSKGDKGESGDKGDIGIKGDKGAKGVTGDKGDKGT---KGFIGNVGFKGDTGDKGII 480 HSP 7 Score: 91.6633 bits (226), Expect = 7.333e-18 Identity = 79/220 (35.91%), Postives = 98/220 (44.55%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAG 265
G +G G NG +GE G GI G G+ G G G G G G+ GS G G G G G +G G GS G++G G G G G+ G G G+ G G G+ G G VG G G G +G G+ G G S G G G G G+ T G G G +G G G G+ G+ G+ G G G G G+ G G LG+ G G
Sbjct: 352 GDKGSKGDNGSKGESGDKGIFGLKGSKGDIGDKGEKGDLGDTGLKGSKGLKGSKGDKGLVNVKGENGFVGDLGSKGSKGDKGESGDKGDIGIKGDKGAKGVTGDKGD---KGTKGFIGNVGFKGDTGDKGIIGDNGSKGIKGSSNNKGDKGDKGNTGDKGITNTKGIKGDKGIKGSKGDLGSVGEKGEKGTKGDIGTKGETGLKGIIGDKGELGSKGIKG 568 HSP 8 Score: 91.6633 bits (226), Expect = 7.723e-18 Identity = 80/206 (38.83%), Postives = 99/206 (48.06%), Query Frame = 0
Query: 115 GTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPG--NPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
G G G++G +G G G +G +G +GQ G G G GI G +G NG G G GT G G G N GS G G G+ G G+ G+ G G G G G G NG G G G G+ G G+ G G+ G+ G PG G G G NG+ G G+ G GDDG KG G GT G G++G +G G G G
Sbjct: 74 GFIGLRGSKGDTGNKGEIGDNGENGDIGQIGDNGSIGSKGIKGMNGFNGSKGIKGDKGTDGIKGDKGQDNFGSKGQKGETGSKGDDGIKGITGSKGFKGDPGTKGENGINGTKGLKGSQGDLGTKGDDGIKGIIGSKGIKGDPGNKGEDGIKG---TNGLKGSKGETGSKGDDGTKGITGLKGTKGNSGSKGDDGDKGIQGLKGEF 276 HSP 9 Score: 63.5438 bits (153), Expect = 4.596e-9 Identity = 50/127 (39.37%), Postives = 61/127 (48.03%), Query Frame = 0
Query: 202 GVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIG--GLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVVLPNKVD 326
G G+ G+ G G G G NG +G G+ G +GS G G+ G G G G G GT G G Q+ G G G+ G GDDG KG G G G PG +G NG+ G G G+ L K D
Sbjct: 74 GFIGLRGSKGDTGNKGEIGDNGENGDIGQIGDNGSIGSKGIKGMNGFNGSKGIKGDKGTDGIKGDKGQDNFGSKGQKGETGSKGDDGIKGITGSKGFKGDPGTKGENGINGTKGLKGSQGDLGTKGD 200 HSP 10 Score: 56.6102 bits (135), Expect = 5.692e-7 Identity = 47/137 (34.31%), Postives = 54/137 (39.42%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTS 174
S G G +G G G G+ G G G GN G G G G G NG G G G G G G G+ T G G +G G+ G G G G G G G G G+ G G G +G G G S
Sbjct: 434 ESGDKGDIGIKGDKGAKGVTGDKGDKGTKGFIGNVGFKGDTGDKGIIGDNGSKGIKGSSNNKGDKGDKGNTGDKGITNTKGIKGDKGIKGSKGDLGSVGEKGEKGTKGDIGTKGETGLKGIIGDKGELGSKGIKGLS 570
BLAST of collagen alpha-1 chain-like vs. SwissProt
Match: gi|667467015|sp|B3EWZ3.1|CADN_ACRMI (RecName: Full=Coadhesin) HSP 1 Score: 121.709 bits (304), Expect = 5.360e-27 Identity = 69/174 (39.66%), Postives = 97/174 (55.75%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMC-NVPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTC-FTDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSD 496
++G +S WG W+ C CG G +ERTR C++P P+ GG C G E C +PCP+NG + W +WS+C + CG G R R C NP+P G++C P+ ES+ C T CPVDGG+ + P + CG GT ++R C+NP PQ+ GA C G T+ +
Sbjct: 402 INGNYSNWGQWTACSVT---CGQGTRERTRLCDNPAPAQGGSQCQGPSSELVGCTEIPCPVNGNWSSWGDWSNC---SSGCGPGKSYRYRDCDNPAPANNGLNC--TGPDQESKDCNSTACPVDGGWSAWSS----TPCSATCGQGTLKRTRECNNPKPQYGGASCFGNETEQE 563 HSP 2 Score: 115.161 bits (287), Expect = 5.690e-25 Identity = 72/185 (38.92%), Postives = 102/185 (55.14%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNVP-CPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCP----DADPNSESRTC----FTDCPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCVE 500
VDG WS W S C CG G Q ++R C++P P HGG C G S CN CP++GG + W +SSC T TCG G ++RTR C +P+P G++CP D P ++ +TC T P++G + +G + AC + CG GT+ ++RLCDNP P G++C G ++ C E
Sbjct: 280 VDGGWSAWSGLSRC---TRACGGGRQYQSRTCSNPFPGHGGRDCVGVRSLSFTCNTQCCPVHGGWSPWGSFSSC---TRTCGGGQKSRTRVCNSPAPSCNGITCPGGNQDIQPCNQ-QTCPTSPSTSFPINGNYSNWGQWTAC---SVTCGQGTRERTRLCDNPAPAQGGSQCQGPSSELVGCTE 454 HSP 3 Score: 112.464 bits (280), Expect = 4.718e-24 Identity = 68/166 (40.96%), Postives = 91/166 (54.82%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNVP-CPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTD-CPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAEC 488
V+G WS WGLWS C + C G + R R C +P P +GG C+G +S+ C V CP++GG WS WS T CG G + ++RTC+NP P GG C S S TC T CPV GG+ +G F +C CG G K+++R+C++P P G C
Sbjct: 223 VNGGWSPWGLWSRC---STTCNPGQRSRQRTCTNPSPKNGGTDCSGPSTQSEPCQVQFCPVDGG---WSAWSGLSRCTRACGGGRQYQSRTCSNPFPGHGGRDC--VGVRSLSFTCNTQCCPVHGGWSPWGSFSSCTR---TCGGGQKSRTRVCNSPAPSCNGITC 377 HSP 4 Score: 110.538 bits (275), Expect = 1.907e-23 Identity = 74/187 (39.57%), Postives = 93/187 (49.73%), Query Frame = 0
Query: 325 VDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCN---------VPCPINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTD-CPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCVET 501
V G WS WG +S C CG G + RTR CN P PS G +C G + Q CN PING ++W +W++C + TCG G RTR C NP+P GG C P+SE C CPV+G + +GD+ C + GCG G + R CDNP P G C G +S DC T
Sbjct: 337 VHGGWSPWGSFSSC---TRTCGGGQKSRTRVCNSPAPSCNGITCPGGNQDIQPCNQQTCPTSPSTSFPINGNYSNWGQWTAC---SVTCGQGTRERTRLCDNPAPAQGGSQC--QGPSSELVGCTEIPCPVNGNWSSWGDWSNC---SSGCGPGKSYRYRDCDNPAPANNGLNCTGPDQESKDCNST 512 HSP 5 Score: 107.071 bits (266), Expect = 1.951e-22 Identity = 71/186 (38.17%), Postives = 92/186 (49.46%), Query Frame = 0
Query: 320 VLPNKVDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCNVPC--PINGGLADWSEWSSCVHNTGTCGLGLETRTRTCTNPSPDFGGMSCPDADPNSESRTCFTD-CPVDGGFGEYGDFGACIPRAFGCGDGTKTQSRLCDNPVPQFEGAECMGAFTQSDDCVETC 502
++P V+G WS W + C G +RTR C DP P GG C G E ++CN C +NGG + W WS C + TC G +R RTCTNPSP GG C + P+++S C CPVDGG+ + C CG G + QSR C NP P G +C+G + S C C
Sbjct: 162 LVPAAVNGAWSHWSPYGPCTHAC----LGTAKRTRTCADPAPVFGGSPCEGVNEEEKICN-DCVGTVNGGWSPWGLWSRC---STTCNPGQRSRQRTCTNPSPKNGGTDC--SGPSTQSEPCQVQFCPVDGGWSAWSGLSRCTR---ACGGGRQYQSRTCSNPFPGHGGRDCVGVRSLSFTCNTQC 334 HSP 6 Score: 85.5001 bits (210), Expect = 9.006e-16 Identity = 50/110 (45.45%), Postives = 63/110 (57.27%), Query Frame = 0
Query: 321 LPNKVDGVWSGWGLWSECQFDADDCGNGMQERTRACNDPPPSHGGDSCAGDGVESQMCN-VPCPINGGLADWSEWSS--CVHNTGTCGLGLETRTRTCTNPSPDFGGMSC 427
+P V+G WS WG WS C + CG G R R C++P P++ G +C G ES+ CN CP++GG WS WSS C + TCG G RTR C NP P +GG SC
Sbjct: 455 IPCPVNGNWSSWGDWSNC---SSGCGPGKSYRYRDCDNPAPANNGLNCTGPDQESKDCNSTACPVDGG---WSAWSSTPC---SATCGQGTLKRTRECNNPKPQYGGASC 555
BLAST of collagen alpha-1 chain-like vs. nr
Match: gi|959056408|ref|XP_014731121.1| (PREDICTED: collagen alpha-2(I) chain isoform X2 [Sturnus vulgaris]) HSP 1 Score: 123.635 bits (309), Expect = 3.222e-25 Identity = 122/280 (43.57%), Postives = 138/280 (49.29%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQ------HGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPG------QAGTPGS---HGVAGTAGSFGTRGPSGTPGSAGGSGLSGPV------------GQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQA---------GVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDG 286
G+PGP+GP G G GE G G PG +GN G G PG G G G G GPPG GLPG +AG PG HG G G G RG G PG +G G +GP+ G G GP G +G PG+ GP+GPVG GP G G G GNPG+ GP G GAPG G G PG PG G +GA G GQ GP G G G G AG G+ GPQG G G PG G G G NG+ GLPG G++GD G
Sbjct: 492 GFPGPKGPTGEPGKPGEKGNVGLAGPRGAPGPEGNNGAQGPPGVTGNQGGKGETGPAGPPGFQGLPGPSGPAGEAGKPGERGLHGEFGVPGPAGPRGERGPPGESGAVGPAGPIGSRGPSGPPGPDGNKGEPGPLGVSGPPGARGPSGPVGSPGPNGAPGEAGLDGNPGNDGPPGRDGAPGFKGERGAPGNPGPSGALGAPGPHGQVGPSGKPGNRGDPGPAGAVGPAGAFGPRGLAGPQGPRGEKGLPGDKGPRGLPGLKGHNGLQGLPGLAGQHGDQG 771 HSP 2 Score: 110.538 bits (275), Expect = 3.799e-21 Identity = 125/314 (39.81%), Postives = 144/314 (45.86%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHG------IPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGT---PGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGL------AGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGF---------------GAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGG------------KGPNGPPGTPGTPGAQGLNGVPGFPGF 314
G PG GP G+ G G PG G PG+DG GP G G G PG G PG GP G PG PG+ G G G G G+ G +GP G G+ GG G +GP G G +GP G G PG G +G G GPAG G G PG G+ GP+G G PG GV+G PG G G +G+ G G G G DG G DG G+ G PG +G G PG+PGP G G G Q G G PG G G G GP GP G G PG +G G+PG G
Sbjct: 441 GEPGLMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGKPGEKGNVGLAGPRGAPGPEGNNGAQGPPGVTGNQGGKGETGPAGPPGFQGLPGPSGPAGEAGKPGERGLHGEFGVPGPAGPRGERGPPGESGAVGPAGPIGSRGPSGPPGPDGNKGEPGPLGVSGPPGARGPSGPVGSPGPNGAPGEAGLDGNPGNDGPPGRDGAPGFKGERGAPGNPGPSGALGAPGPHGQVGPSGKPGNRGDPGPAGAVGPAGAFGPRGLAGPQGPRGEKGLPGDKGPRGLPGLKGH 754 HSP 3 Score: 103.99 bits (258), Expect = 4.400e-19 Identity = 127/306 (41.50%), Postives = 140/306 (45.75%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDG---------NFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATG------------------VPGSPGPLGTAGTAGQAAQNGIGGLPG---QPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNL 318
G PG GP G G G PG G+PG+DG N G G GA G G G PG PG GP GLPGQ G+PG G G G G G G G AG G G +G G GP G G PG G G GP G G G+ G G PG G GG G G AG G G+PG G G +G G+ G G G G G G+ G PG GA G G PGPLG +G G +G G PG PG G DG G +GPPG G PG +G G PG PG G L
Sbjct: 384 GEPGSAGPPGPAGLRGVPGSRGLPGADGRAGVMGPAGNRGASGPVGAKGPSGDAGRPGEPGLMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGKPGEKGNVGLAGPRGAPGPEGNNGAQGPPGVTGNQGGKGETGPAGPPGFQGLPGPSGPAGEAGKPGERGLHGEFGVPGPAGPRGERGPPGESGAVGPAGPIGSRGPSGPPGPDGNKGEPGPLGVSGPPGARGPSGPVGSPGPNGAPGEAGLDGNPGNDGPPGRDGAPGFKGERGAPGNPGPSGAL 689 HSP 4 Score: 101.679 bits (252), Expect = 2.447e-18 Identity = 101/220 (45.91%), Postives = 118/220 (53.64%), Query Frame = 0
Query: 79 GALGTPGTNGVPGSPGPPGPPGL---PGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQ---DGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNG 292
G G G+ G PGS GPPGP GL PG G PG+ G AG G G RG SG G+ G SG +G G+ GL GP G G PGS GP G GP G G G VG G G+ G G G PG G G PG PG G +G +G +G GP+G++G G G+ G G GP G G G PGP G AG AG+ + G+ G G PG G G +GP G
Sbjct: 375 GEEGKRGSPGEPGSAGPPGPAGLRGVPGSRGLPGADGRAGVMGPAGNRGASGPVGAKGPSGDAGRPGEPGLMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGKPGEKGNVGLAGPRGAPGPEGNNGAQGPPGVTGNQGGKGETGPAGPPGFQGLPGPSGPAGEAGKPGERGLHGEFGVPGPAGPRGERGPPG 594 HSP 5 Score: 100.908 bits (250), Expect = 3.766e-18 Identity = 132/319 (41.38%), Postives = 155/319 (48.59%), Query Frame = 0
Query: 43 GYPGPRG---PAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGN---------PGSGGPSGGFGAPGQAGVAGVPGVPGTGGTM------------------GASGSQGQNG---------------PDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPG 316
G PG RG P G G+ G PG G G G+ G G G GTPG G PG+PG G PG PG G PG G G G G RG + GSAG +G +GP+G +G G G G G GP G VGP GPAG G +G PG+ PG+ G G GA G GVAG PG+PG G + G +G++G++G P G +GK G G G AG PGP G GVPGS G G G A G+ G G G +G G KGP+G G PG PG G G+PG PG PG
Sbjct: 150 GRPGERGVAGPQGARGFPGTPGLPGFKGIRGHNGLDGQKGQPGTPGNKGEPGAPGENGTPGQPGARGLPGERGRVGAPGPAGARG---SDGSAGPTGPAGPIGAAGPPGFPGAPGAKGEIGPAGNVGPTGPAGPRGEIGLPGSSGPVGPPGNPGANGLPGAKGAAGLPGVAGAPGLPGPRGILGPPGPAGPSGARGLVGEPGPAGAKGESGMKGEPGAAGPAGPPGPSGEEGKRGSPGEPGSAGPPGPAGLRGVPGSRGLPGADGRA------GVMGPAGNRGASGPVGAKGPSGDAGRPGEPGLMGPRGLPGQPGSPG 459 HSP 6 Score: 100.138 bits (248), Expect = 6.651e-18 Identity = 118/293 (40.27%), Postives = 140/293 (47.78%), Query Frame = 0
Query: 67 GSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPV---GQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQ---------------------------GQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAG---------QAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTP---GTPGAQGLNGVPGFPGFPGN 317
G +G G PG PG+ G PG G+ G PG G PG G+AG G G G +G G +GPSG G G GL GP GQ G GP G+ G G G +G VGP GPAG G G G PG GP+G G PG+ G G+ G G G G +G+Q G +GP G GK G+ G G+ GVPGP G G G PG G G AG +G G PG G +G G +GP+GP G+P G PG GL+G PG G PG
Sbjct: 375 GEEGKRGSPGEPGSAGPPGPAGLRGVPGSRGLPGADGRAGVMGPAGNRGASGPVGAKGPSGDAGRPGEPGLMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGKPGEKGNVGLAGPRGAPGPEGNNGAQGPPGVTGNQGGKGETGPAGPPGFQGLPGPSGPAGEAGKPGERGLHGEFGVPGPAGPRGERGPPGESGAVGPAGPIGSRGPSGPPGPDGNKGEPGPLGVSGPPGARGPSGPVGSPGPNGAPGEAGLDGNPGNDGPPGR 667 HSP 7 Score: 96.2857 bits (238), Expect = 1.285e-16 Identity = 130/309 (42.07%), Postives = 151/309 (48.87%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEGEPGQ------------HGIPGSDGNFGPPGTPGALGTPGTNGV------------PGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGK------AGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQ---NGIGGLPGQPGRNGDDGGK---GPNGPPGTPGTPGAQGLNGVPGFPG 313
PAG GP GPAG G G PG +G+PG+ G G PG GA G PG G+ G G PGP G G++G G G AG AG G G G GS G G +GP G +GL G G G+PG+ G G +GPAG G SG VG + GPSG G PG+ G+ G G+PG G+ G +G +G G G DG+ AG G G G PGP+G TG PG PG G G AG G G G PG G+ GGK GP GPPG G PG G G G PG
Sbjct: 268 PAGNVGPTGPAGPRGEIGLPGSSGPVGPPGNPGANGLPGAKGAAGLPGVAGAPGLPGPRGILGPPGPAGPSGARGLVGEPGPAGAKGESGMKGEPGAAGPAGPPGPSGEEGKRGSPGEPGSAGPPGPAGLRGVPGSRGLPGADGRAGVMGPAGNRGASGPVG------AKGPSGDAGRPGEPGLMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGKPGEKGNVGLAGPRGAPGPEGNNGAQGPPGVTGNQGGKGETGPAGPPGFQGLPGPSGPAGEAGKPG 570 HSP 8 Score: 95.9005 bits (237), Expect = 1.527e-16 Identity = 134/359 (37.33%), Postives = 155/359 (43.18%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGT---------------------------AGSFGTRGPSG------------------------TPGSAGGSGLSGPVGQSGLAGPNG------------RNGIPGSSGPNGPVGPAG---------------PAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNG----IG--GLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PG G G+ G G GQ G PG+ GN G PG PG GTPG G G PG G G PG AG GS G AG AG+ G GP+G PG+ G +GL G G GL GP G G+ G GP G G +G P+G G G+PG PGS GP G G G G G+PG G G MG +G++G +GP G G +G G G+ G+ GP+G G PGSPGP G G G +G IG G G+PG G G KGP G PG PG G GL G G PG GN
Sbjct: 168 GTPGLPGFKGIRGHNGLDGQKGQPGTPGNKGEPGAPGENGTPGQPGARGLPGERGRVGAPGPAGARGSDGSAGPTGPAGPIGAAGPPGFPGAPGAKGEIGPAGNVGPTGPAGPRGEIGLPGSSGPVGPPGNPGANGLPGAKGAAGLPGVAGAPGLPGPRGILGPPGPAGPSGARGLVGEPGPAGAKGESGMKGEPGAAGPAGPPGPSGEEGKRGSPGEPGSAGPPGPAGLRGVPGSRGLPGADGRAGVMGPAGNRGASGPVGAKGPSGDAGRPGEPGLMGPRGLPGQPGSPGPAGKEGPVGFPGADGRVGPIGPAGNRGEPGNIGFPGPKGPTGEPGKPGEKGNVGLAGPRGAPGPEGN 526 HSP 9 Score: 73.9442 bits (180), Expect = 8.995e-10 Identity = 67/138 (48.55%), Postives = 75/138 (54.35%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPP---GPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGL---SGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAG 169
PS P G PGP G G G +G PG G PG DG G G GA G PG +G G+PGP GP G PG G PG G G AG+FG RG +G G G GL GP G GL G NG G+PG +G +G GP G
Sbjct: 637 PSGPVGSPGPNGAPGEAGLDGNPGNDGPPGRDGAPGFKGERGAPGNPGPSGALGAPGPHGQVGPSGKPGNRGDPGPAGAVGPAGAFGPRGLAGPQGPRGEKGLPGDKGPRGLPGLKGHNGLQGLPGLAGQHGDQGPPG 774 HSP 10 Score: 72.0182 bits (175), Expect = 3.414e-9 Identity = 101/235 (42.98%), Postives = 115/235 (48.94%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPG------------SDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQA---GTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGP------AGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPG 256
G PGP GP G G GE G G G DGN G PG G G PG G G G PGP G PG+A G PG+ G G G+ G +G G PG+ G SG G G G GP+G+ G G GP G VGPAG AG G G G PG GP G G G G+ G+PG+ G G G G+ G GP G G +G G G+ G+PGP G GV GS G
Sbjct: 579 GVPGPAGPRGERGPPGESGAVGPAGPIGSRGPSGPPGPDGNKGEPGPLGVSGPPGARGPSGPVGSPGPNGAPGEAGLDGNPGNDGPPGRDGAPGFKGERGAPGNPGPSGALGAPGPHGQVGPSGKPGNRGDPGPAGAVGPAGAFGPRGLAGPQGPRGEKGLPGDKGPRGLPGLKGHNGLQGLPGLAGQHGDQGPPGNTGPAGPRGPPGPSGPPGKDGRNGLPGPIGPAGVRGSHG 813
BLAST of collagen alpha-1 chain-like vs. nr
Match: gi|532077319|ref|XP_005324443.1| (collagen alpha-2(V) chain [Ictidomys tridecemlineatus]) HSP 1 Score: 123.635 bits (309), Expect = 3.774e-25 Identity = 129/312 (41.35%), Postives = 150/312 (48.08%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGP---PGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQD------GSAGQAGVPGP---------------------QGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
+ P G G G GV G++GE G G PG G GP G PG G G G PG+ GPPGP G PG G PGS G+ G G+ G RGP G+ G GG G G G+ GL G G G PG GP G +GP G +G G G PG+ G G G G PG G +G PG PG G G G +G G DG G +G G G+ G PGP QG G PG+ GPLG G G + G G+ G PG G GG GP+GP G+PG G G G PG G PG +
Sbjct: 458 TGPQGIRGQTGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGSPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGASGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGI 769 HSP 2 Score: 115.546 bits (288), Expect = 1.244e-22 Identity = 118/291 (40.55%), Postives = 136/291 (46.74%), Query Frame = 0
Query: 49 GPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVG------------------PAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVVL 321
GP G G G G G+PG G GP G PG G +G+PG PGP GP G+PG +G PG+ G+ G AG G RGP G G G +G GPVG GL G G +G PG+ GP G G GP G G G PG P G G+AG G PG G G +G G +G+ GP G G G G G+ G PG +G G G PGP G G G +G G G PGR PG PG PGA+GL G PG G G L L
Sbjct: 324 GPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGA---HGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAMGTDGTPGAKGPTGSPGTSGPPGLTGPPGSPGPQGSTGPQGIRGQTGDPGVP---------GFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGSPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGR------------PGEPGLPGARGLTGNPGVQGPEGKLGPL 590 HSP 3 Score: 105.531 bits (262), Expect = 1.968e-19 Identity = 131/313 (41.85%), Postives = 148/313 (47.28%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGS---------------------PGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGG---FGAPGQAGVAGVP---GVPGTGGTMGASGSQGQNGPDGHDG-KAGQD--GSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGK---GPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
P P G PG RG G G G+ G HG+PG G GP G PG+ G PG G+ G PGP G GLPG GT G+ G G GS GT GP G G G G G G G+ G G G+PG G GP G GP G G +G PG G GP G G PG G G P G PG+ G G G+QG+ GP G G K GQ G G+ G+PG +G TG PG GP G G G + ++G G PG G G G GP G G PG PG G GVPG G PG
Sbjct: 334 PLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAMGTDGTPGAKGPTGSPGTSGPPGLTGPPGSPGPQGSTGPQGIRGQTGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGSPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGASGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGK 646 HSP 4 Score: 96.2857 bits (238), Expect = 1.325e-16 Identity = 131/347 (37.75%), Postives = 152/347 (43.80%), Query Frame = 0
Query: 43 GYPGPRGPAG---VNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVP---GSPGPPGPPGLPGQAGTPGSHGVAGT---------------AGSFGTRGP------------------------SGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHD------------GKAGQDGSAGQAGVPGPQGATGVPGSPGP------LGTAGTAGQAAQNGIGGLPGQPGRNGD---------DGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PG RG G V G EG+ G G G DG GPPG+ G G PG+ G+P GS G PG PG G AG PG G G AG G +GP G PG G G GP G+ G G G GI G G G G GP G GS G G G GP G G PG+ G+AG PG G G +G G++G G DG G G+ G G G+ GP G+ G PGS G +G AG G Q G+ G PG+PG+ GD G GP+GP G PG G +G G PG GFPG+
Sbjct: 567 GLPGARGLTGNPGVQGPEGKLGPLGASGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913 HSP 5 Score: 92.8189 bits (229), Expect = 1.633e-15 Identity = 115/269 (42.75%), Postives = 131/269 (48.70%), Query Frame = 0
Query: 64 GIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGA---------------PGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PG +GN G G G+PG G PG+PG PG G G G G G G G+ G GP+G G+ G G G G+ G GP G G G+ G G GP GP G GS G PGNPG G +G GA PG G G+PG GT GT GA G G G G G G GS G G GPQG G G PG G G AG + G G+ G G G++G +GP G PGT G PG G G PG GFPG+
Sbjct: 267 GEPGRNGNTG---EVGFTGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSSGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPVGSQGLPGAMGTDGTPGAKGPTGSPGTSGPPGLTGPPGSPGPQGSTGPQGIRGQTGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGSPGNRGFPGS 532 HSP 6 Score: 88.9669 bits (219), Expect = 2.574e-14 Identity = 122/361 (33.80%), Postives = 138/361 (38.23%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGV------PGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGS------------------------------------------------VGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIG------------------------------GLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
P G PG GP G G G PG G PGSDG GP G G G G++G PG PG PG PG G G PG G G G G G G PG G G+ G G GL GP G +G PG G G G G G G G PG+PG+ GP G G G G G PG+ G G G +G G +GP G G G G G G+ G G G+ G+PGP G G G+ G GL G PG G+ G +G NGP G G G QG +G PG G PG
Sbjct: 505 PRGDPGTVGPPGPMGERGSPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGASGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE 865 HSP 7 Score: 83.1889 bits (204), Expect = 1.315e-12 Identity = 121/349 (34.67%), Postives = 143/349 (40.97%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPG---TNGVPGSPGPPGPPGLPGQAGTPGSHGVA---------------------------------------------------GTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSG---SVGTPGNPGSGGPSGGFGAPGQAGVAGV---------------------------PGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGV---PGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQG 304
G PG +GP G G G G+ G PG G+ G G PG++G PG ++G PG PG G G+PGQ G PG G G G G RG G PG G G++G G+ G+AG +G +G GS GP G VG GP G G G G PG G GG G G G AG G+ G G+ G GS+G+NGP G G AG G GQ GV PG G G GSPGP G AG+ G NG+ GL GG+G GPPG G PG+ G
Sbjct: 576 GNPGVQGPEGKLGPLGASGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGL---------KGGRGTQGPPGATGFPGSAG 915 HSP 8 Score: 82.0333 bits (201), Expect = 3.117e-12 Identity = 128/357 (35.85%), Postives = 145/357 (40.62%), Query Frame = 0
Query: 42 AGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGR---------------NGIPGSSGPNGPVG------------------------------------PAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQ------------------------NGPDGHDGKAGQDGSAGQ---------AGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGF 314
G PGPRG G PG G PGS G GP G G G G +G PG G PG PG G AG+PG G+AG+ G G P+G PG GG G GP G +G G GR G PG GP G G P GPAGT+G G G PGQ G G+PG+PG GT G G G GP G+DG G+DG+ G+ AG+PG QGA PG+PGP+G G AGQ G G G PGR G G GP GP G G G +G G G GF
Sbjct: 815 KGEPGPRG------LVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHG---PNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQSGPDGPPGPAGTTGQRGI------------VGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGEHGDRGDPGPAGLPGSQGA---PGTPGPVGAPGDAGQRGDPGSRGPIGPPGRAGKRGLHGPQGPRGDKGDSGDRGDRGQKGHRGF 1147 HSP 9 Score: 81.2629 bits (199), Expect = 5.916e-12 Identity = 89/210 (42.38%), Postives = 99/210 (47.14%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGL---------------SGPVGQSGLAGPNGRNGIPGSSGPNGP---VGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSA 237
GPRG G G GEPG G+PG G G G G G+PG G G GPPG G+PG+ G G+ G G G G +G GT G+ G GL G G GL GP G G PGS G NGP VG AGP G G G G PG G G G+PG G+AG PG G G G G +G GP G G G G
Sbjct: 708 GPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRV 917
BLAST of collagen alpha-1 chain-like vs. nr
Match: gi|1334023903|ref|XP_023568104.1| (collagen alpha-2(V) chain [Octodon degus]) HSP 1 Score: 123.635 bits (309), Expect = 4.114e-25 Identity = 129/312 (41.35%), Postives = 149/312 (47.76%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGP---PGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQD------GSAGQAGVPGP---------------------QGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
+ P G G G GV G++GE G G PG G GP G PG G G G PG+ GPPGP G PG G PGS G+ G G+ G RGP G+ G GG G G G+ GL G G G PG GP G +GP G G G G PG+ G G G G PG G +G PG PG G G G +G G DG G +G G G+ G PGP QG G PG+ GPLG G G + G G+ G PG G GG GP+GP G+PG G G G PG G PG +
Sbjct: 458 TGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGTPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGI 769 HSP 2 Score: 120.168 bits (300), Expect = 4.512e-24 Identity = 128/279 (45.88%), Postives = 145/279 (51.97%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVVL 321
G G GP G G G G G+PG G GP G PG G +G+PG PGP GP G+PG AG PG+ G+ G AG G RGP G G G +G GP G GL G G +G PG+ GP G G +GP G G G+PG GS GP G G PG GV G G G G G G QG GP G +GK G G G G PGP G G PG+ G G+ G G G G G +G GG+G G PG PG PGA+GL G PG G G L L
Sbjct: 318 GAKGEAGPTGQMGAMGPLGPRGMPGERGRLGPQGAPGQRGA---HGMPGKPGPMGPLGIPGSAGFPGNPGMKGEAGPTGARGPEGPQGQRGENGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLLGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGN---RGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPL 590 HSP 3 Score: 103.219 bits (256), Expect = 1.053e-18 Identity = 124/284 (43.66%), Postives = 139/284 (48.94%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGG---FGAPGQAGVAGVP---GVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
G PGP GP G+ G G PG PG G GP G G G G G G PGP G GLPG GT G+ G G GS GT GP G G G G G G G+ G G G+PG G GP G GP G G +G PG G GP G G PG G G P G PG+ G G G+QG+ GP G G G G G+ G PG GA G+ G+PG G G G G PG+ GR G G G G PG+ G PG +G +G PG PG GN V
Sbjct: 363 GKPGPMGPLGIPGSAGFPGN---PGMKGEAGPTGARGPEGPQGQRGENGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLLGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPL------GAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637 HSP 4 Score: 98.9821 bits (245), Expect = 1.809e-17 Identity = 117/269 (43.49%), Postives = 133/269 (49.44%), Query Frame = 0
Query: 64 GIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGA---------------PGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PG +GN G G G+PG G PG+PG PG G G G G G G G+ G GP+G G+ G G G G+ G GP G G G+ G G GP GP G GS G PGNPG G +G GA PG AG G+PG GT GT GA G G G G G G GS G G GPQG G PG PG G G AG + G G+ G G G++G +GP G PGT G PG G G PG GFPG+
Sbjct: 267 GEPGRNGNTG---DVGFTGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEIGAPGAKGEAGPTGQMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMKGEAGPTGARGPEGPQGQRGENGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLLGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGS 532 HSP 5 Score: 98.5969 bits (244), Expect = 2.685e-17 Identity = 107/276 (38.77%), Postives = 129/276 (46.74%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPG---QHGIPGSDGNFGPPGTPGALGTPGT---------------------NGVPGSPGPPGPPGLPGQAG---TPGSHGVAGTAG---SFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGD 284
+ P G GP GP G G G PG G+PG+ G G PG G G+ GT G+ G PG PG PG G+AG PG HGV G G G RGP G PG+ G G G G G G G +G+PG G G GP G +G G G PG PG G PG G+ G PGV G G +G G+ G++G G G G G G G+PGP+G++G PG PG G AG GQ G PG++G+
Sbjct: 389 AGPTGARGPEGPQGQRGENGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLLGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGE------PGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQR---------GAPGKDGE 649 HSP 6 Score: 93.9745 bits (232), Expect = 6.306e-16 Identity = 130/349 (37.25%), Postives = 149/349 (42.69%), Query Frame = 0
Query: 43 GYPGPRGPAG---VNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPG---SPGPPGPPGLPGQAGTPGSHGVAGT---------------AGSFGTRGP------------------------SGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGP----------------QGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGT------------PGAQGLNGVPGFPGFPGNL 318
G PG RG G V G EG+ G G PG DG GPPG+ G G PG+ G+PG S G PG PG G AG PG G G AG G +GP G PG G G GP G+ G G G GI G G G G GP G GS G G G GP G G PG+ G+AG PG G G MG G++G G DG G G G +G AG G QG+ G G G +G AG G Q G+ G PG+PG+ G+ G GP G G+PG G QG G GFPG G +
Sbjct: 567 GLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGTPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGMGEKGAEGTAGNDGARGLPGPLGPSGPAGPTGEKVNQYCAKFSLIFVFSQGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGNAGSPGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGSAGRV 915 HSP 7 Score: 90.5077 bits (223), Expect = 7.371e-15 Identity = 120/315 (38.10%), Postives = 135/315 (42.86%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRN----------------GIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSA---------------GQAGVPGPQGATGVPGSPGPLGTAGTAGQAA---------------------------QNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGA 302
GPRG G G GEPG G+PG G G G G G+PG G G GPPG G+PG+ G G+ G G G G +G GT G+ G GL GP+G SG AGP G G G +GP G VG AGP G G G G PG G G G+PG G+AG PG G G G G +G GP G G G G G+ G GP G G PGS G +G G AG Q GI G+PGQ G G G GP G PG G GA
Sbjct: 708 GPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGMGEKGAEGTAGNDGARGLPGPLGPSGPAGPTGEKVNQYCAKFSLIFVFSQGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGNAGSPGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGA 1022 HSP 8 Score: 81.6481 bits (200), Expect = 4.538e-12 Identity = 133/362 (36.74%), Postives = 151/362 (41.71%), Query Frame = 0
Query: 29 EQVASQCACPSSPAGYPGPRGPAGVNGWEGEPGQHGIPG-------SDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGG---------------------------------------PSGGFGAPGQAGVAGVPGVPGTGGTMGASG------------------------SQGQNGPDGHDGKAGQDGSAGQAGV---PGPQG---ATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGF 314
E+ A A G PGP GP+G G GE S G+ G G GA+G G G G PG G PG PGQ G GS G G AGS G GP G PG GG G GP G +G G GR G PG +G GP GP G G G G G+PGS G G G PGQ G G+PG+PG GT G G G GP G+DG G+DG+ G+ G PGP G ++G PG+PGP+G G AGQ G G G PGR G G GP GP G G G +G G G GF
Sbjct: 784 EKGAEGTAGNDGARGLPGPLGPSGPAGPTGEKVNQYCAKFSLIFVFSQGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGNAGSPGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEAGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSSGAPGTPGPVGAPGDAGQRGDPGSRGPMGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1145 HSP 9 Score: 75.8702 bits (185), Expect = 2.709e-10 Identity = 105/284 (36.97%), Postives = 118/284 (41.55%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGS-------VGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGD---------------DGGKGPNGPPGTPGTPGAQG 304
G PG GP G G G PG+ G PG G PG G+ G GP GP G PG GT G G G G G RG +GTPG G G G G G AG +G G+PG GP+GP GP G V + G+ G GP+G G G G G PGV G G+ GQ G+AG PGPQG G PG GP+G G G G G G PG G G G GPPG G PG+ G
Sbjct: 699 GDPGAVGPLGPRGERGNPGERG------------EPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGMGEKGAEGTAGNDGARGLPGPLGPSGPAGPTGEKVNQYCAKFSLIFVFSQGSRGENGPTGAVGFAGPQGPDGQPGV------------------KGEPGEPGQKGNAGS---PGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHG 949 HSP 10 Score: 68.5514 bits (166), Expect = 4.513e-8 Identity = 117/320 (36.56%), Postives = 134/320 (41.88%), Query Frame = 0
Query: 16 LFLESEERQGRKVEQVASQCACPSSPAGYPGPRGPAGVNGWEGE---PGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGS---------------------------PGPPGPPGL---------------------------------------PGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQ 266
+F+ S+ +G A A P P G PG +G G G +G PG G+ GS G GP G PG G GT G PG+ PG GPPGL PG AGT G G+ G G G RG G PG AG G GP G +G GP G G G NGPVG AGP G +G+ GTPG G+ G G G PG AG+ G G PGT G +GA G GQ G G G G G AG+ G+PGPQG G G G G G G
Sbjct: 826 IFVFSQGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGNAGSPGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPV---GPPGSNGPVGEAGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSSGAPGTPGPVGAPGDAGQRGDPGSRGPMGPPGRAGKRGLPGPQGPRGDKGDNGDRGDRGQKGH 1142
BLAST of collagen alpha-1 chain-like vs. nr
Match: gi|504126969|ref|XP_004577038.1| (PREDICTED: collagen alpha-2(V) chain [Ochotona princeps]) HSP 1 Score: 123.25 bits (308), Expect = 4.897e-25 Identity = 129/312 (41.35%), Postives = 149/312 (47.76%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGP---PGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQD------GSAGQAGVPGP---------------------QGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
+ P G G G GV G++GE G G PG G GP G PG G G G PG+ GPPGP G PG G PGS G+ G G+ G RGP G+ G GG G G G+ GL G G G PG GP G +GP G G G G PG+ G G G G PG G +G PG PG G G G +G G DG G +G G G+ G PGP QG G PG+ GPLG G G + G G+ G PG G GG GP+GP G+PG G G G PG G PG +
Sbjct: 458 TGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPAGTIGDTGPPGLQGMPGERGI 769 HSP 2 Score: 117.472 bits (293), Expect = 3.036e-23 Identity = 126/273 (46.15%), Postives = 143/273 (52.38%), Query Frame = 0
Query: 49 GPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVVL 321
GP G G G G G+PG G GP G PG G +G+PG PGP GP G+PG AG PG+ G+ G AG G RGP G G G +G GP G GL G G +G PG+ GP G G +GP G G G+PG GS GP G G PG GV G G G G G G QG GP G +GK G G G G PGP G G PG+ G G+ G G G G G +G GG+G G PG PG PGA+GL G PG G G L L
Sbjct: 324 GPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGA---HGMPGKPGPMGPLGIPGSAGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLPGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGN---RGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPL 590 HSP 3 Score: 98.9821 bits (245), Expect = 1.719e-17 Identity = 125/284 (44.01%), Postives = 140/284 (49.30%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGG---FGAPGQAGVAGVP---GVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
G PGP GP G+ G G PG PG G GP G G G G G G PGP G GLPG GT G+ G G GS GT GP G PG G G G G G+ G G G+PG G GP G GP G G +G PG G GP G G PG G G P G PG+ G G G+QG+ GP G G G G G+ G PG GA G+ G+PG G G G G PG+ GR G G G G PG+ G PG +G +G PG PG GN V
Sbjct: 363 GKPGPMGPLGIPGSAGFPGN---PGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLPGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPL------GAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637 HSP 4 Score: 98.9821 bits (245), Expect = 2.041e-17 Identity = 118/269 (43.87%), Postives = 133/269 (49.44%), Query Frame = 0
Query: 64 GIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGA---------------PGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PG +GN G G G+PG G PG+PG PG G G G G G G GS G GP+G G+ G G G G+ G GP G G G+ G G GP GP G GS G PGNPG G +G GA PG AG G+PG GT GT GA G G G G G G GS G G GPQG G PG PG G G AG + G G+ G G G++G +GP G PGT G PG G G PG GFPG+
Sbjct: 267 GEPGRNGNTG---EVGFAGSPGARGFPGAPGLPGLKGHRGHKGLEGPKGEVGATGSKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGIPGSAGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAVGTDGTPGAKGPTGSAGTSGPPGLPGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGIQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGS 532 HSP 5 Score: 95.5153 bits (236), Expect = 2.609e-16 Identity = 135/347 (38.90%), Postives = 156/347 (44.96%), Query Frame = 0
Query: 43 GYPGPRGPAG---VNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPG---SPGPPGPPGLPGQAGTPGSHGVAGTAGS------------FGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTP------------------GNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGS---------------AGQAGVPGPQGATGVPGSP------------GPLGTAGTAGQAAQNGIGGLPGQPGRNGD---------DGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PG RG G V G EG+ G G PG DG GPPG+ G G PG+ G+PG S G PG PG G AG PG G G G G RG G PG G GL GP G G G G G+PG G GP+GP G G G G P G GS GP+G G G G+ G+PG G GT G G +G G G +G AG DG+ G+ G PGP+G G PGS G +G AG G Q G+ G PG+PG+ GD G GP+GP G PG G +G G PG GFPG+
Sbjct: 567 GLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPAGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGS 913 HSP 6 Score: 90.8929 bits (224), Expect = 6.108e-15 Identity = 128/361 (35.46%), Postives = 147/361 (40.72%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGP---------------------PGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGT---PGSAGGSGLSGPVGQSGLAGPNGRNGIPGS---------------SGPNGPVGPAGPAGTSG---------------SVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIG------------------------------GLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
P G PG GP G G G PG G PGSDG GP PG PG G PG G+ G+PG GP G G G PG G G GS G RG G+ PG G SG G G++G AG G+ G PG +G G GP GP G G G PG+PG+ GP G G G G G PG+ G G G +G G +GP G G AG G G G+ G G G+ G+PGP G G G+ G GL G PG G+ G +G NGP G G G QG +G PG G PG
Sbjct: 505 PRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPAGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE 865 HSP 7 Score: 90.5077 bits (223), Expect = 9.057e-15 Identity = 132/344 (38.37%), Postives = 149/344 (43.31%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGG---------------------------------------PSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQ------------------------NGPDGHDGKAGQDGSAGQ---------AGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGF 314
G PGPRG G PG G PGS G GP G G G G +G PG G PG PG G AG+PG G+AG S G GP+G PG GG G GP G +G G GR G PG +G GP GP G G G G G+PGS G G G PGQ G G+PG+PG GT G G G GP G+DG G+DG+ G+ AG+PG QGA PG+PGP+G G AGQ G G G PGR G G GP GP G G G +G G G GF
Sbjct: 816 GEPGPRG------LVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAG---SPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGA---PGTPGPVGAPGDAGQRGDPGSRGPVGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGHRGF 1147 HSP 8 Score: 85.8853 bits (211), Expect = 2.299e-13 Identity = 125/349 (35.82%), Postives = 147/349 (42.12%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPG---TNGVPGSPGPPGPPGLPGQAGTPGSHG------------VAGTAGSFGTRGPS---------------------GTPGSAGGSGLSGPVGQSG---------LAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPG------------NPGSGGPSGGFGAPGQAGVAGV---------------------------PGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGV---PGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQG 304
G PG +GP G G G PG+ G PG G+ G G PG++G PG ++G PG PG G G+PGQ G PG G +AG G G GP+ G PG G G GP G+ G + G G G+ G GP+GP G GPAGT G G PG PG G GG G G G AG G+ G G+ G GS+G+NGP G G AG G GQ GV PG G G GSPGP G AG+ G NG+ GL GG+G GPPG G PG+ G
Sbjct: 576 GNPGVQGPEGKLGPLGAPGEDGRPGPPGSVGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKPGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPAGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGL---------KGGRGTQGPPGATGFPGSAG 915 HSP 9 Score: 81.6481 bits (200), Expect = 3.960e-12 Identity = 121/317 (38.17%), Postives = 134/317 (42.27%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGL---------------SGPVGQSGLAGPNGRNGIPGSSGPNGP---VGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSA---------------GQAGVPGPQGATGVPGSPGPLGTAGTAGQAA---------------------------QNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGA 302
GPRG G G GEPG G+PG G G G G G+PG G G GPPG G+PG+ G G+ G G G G +G GT G+ G GL G G GL GP G G PGS G NGP VG AGP G G G G PG G G G+PG G+AG PG G G G G +G GP G G G G G+ G GP G G PGS G +G G AG Q GI G+PGQ G G G GP G PG G GA
Sbjct: 708 GPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPAGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGA 1024 HSP 10 Score: 76.2554 bits (186), Expect = 2.010e-10 Identity = 126/388 (32.47%), Postives = 147/388 (37.89%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQ---HGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTR---------------------------GPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGAS---------------GSQGQNGPDGHDGKAGQDGSA---------------------------------------GQAGVPGPQGATGVPGSPGPLGTAGT------------------------AGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
P G PG RG G+ G GE G HG G G+ GP GT G G PG G+PG G G PG G G G G GTAG+ G R GP G+ G+ G G +GP G G AGP G +G PG G G G G AG+ G G G+PG GP+G G G G G PG G G+ G G G+ GP G G G G G G+PG +G G+PG PGP GT G G+ G G G PGR+G G +G G PG G PG+QG G PG G PG+
Sbjct: 709 PRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPAGTIGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGD 1096 HSP 11 Score: 66.6254 bits (161), Expect = 1.825e-7 Identity = 114/307 (37.13%), Postives = 129/307 (42.02%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQ------------HGIPGSDGNFGPPGTPGALGTPGTNGVPGS---------------------------PGPPGPPGL---------------------------------------PGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQ 266
P+ G+ GP+GP G G +GEPG+ G+ GS G GP G PG G GT G PG+ PG GPPGL PG AGT G G+ G G G RG G PG AG G GP G +G GP G G PGS+GP G GP GPAG GTPG G+ G G G PG AG+ G G PGT G +GA G GQ G G G G G AG+ G+PGPQG G G G G G G
Sbjct: 841 PTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDAGSPGPQGLAGSPGPHGPNGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPTGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGND---GTPGRDGAVGERGDRGDPGPAGLPGSQGAPGTPGPVGAPGDAGQRGDPGSRGPVGPPGRAGKRGLPGPQGPRGDKGDHGDRGDRGQKGH 1144
BLAST of collagen alpha-1 chain-like vs. nr
Match: gi|533115507|ref|XP_005373380.1| (PREDICTED: collagen alpha-2(V) chain [Chinchilla lanigera]) HSP 1 Score: 123.25 bits (308), Expect = 5.159e-25 Identity = 129/312 (41.35%), Postives = 149/312 (47.76%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGP---PGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQD------GSAGQAGVPGP---------------------QGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
+ P G G G GV G++GE G G PG G GP G PG G G G PG+ GPPGP G PG G PGS G+ G G+ G RGP G+ G GG G G G+ GL G G G PG GP G +GP G G G G PG+ G G G G PG G +G PG PG G G G +G G DG G +G G G+ G PGP QG G PG+ GPLG G G + G G+ G PG G GG GP+GP G+PG G G G PG G PG +
Sbjct: 458 TGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKLGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGI 769 HSP 2 Score: 114.775 bits (286), Expect = 2.463e-22 Identity = 124/273 (45.42%), Postives = 141/273 (51.65%), Query Frame = 0
Query: 49 GPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVVL 321
GP G G G G G+PG G GP G PG G +G+PG PGP GP G+ G G PG+ G+ G AG G RGP G G G +G GP G GL G G +G PG+ GP G G +GP G G G+PG GS GP G G PG GV G G G G G G QG GP G +GK G G G G PGP G G PG+ G G+ G G G G G +G GG+G G PG PG PGA+GL G PG G G L L
Sbjct: 324 GPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGA---HGMPGKPGPMGPLGISGSPGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLIGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGN---RGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPL 590 HSP 3 Score: 106.686 bits (265), Expect = 8.110e-20 Identity = 125/313 (39.94%), Postives = 146/313 (46.65%), Query Frame = 0
Query: 38 PSSPAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGP------PGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSG------------------PVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGG---FGAPGQAGVAGVP---GVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGNLVV 320
P P G PG RG G G G+ G HG+PG G GP PG PG G G G G+ GP GP G G+ G PG G G G+ GT GTPG+ G +G +G G G+ G G G+PG G GP G GP G G +G PG G GP G G PG G G P G PG+ G G G+QG+ GP G G G G G+ G PG GA G+ G+PG G G G G PG+ GR G G G G PG+ G PG +G +G PG PG GN V
Sbjct: 334 PLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGISGSPGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAMGT---DGTPGAKGPTGSAGTSGPPGLIGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPL------GAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGV 637 HSP 4 Score: 96.2857 bits (238), Expect = 1.314e-16 Identity = 116/266 (43.61%), Postives = 131/266 (49.25%), Query Frame = 0
Query: 67 GSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGA---------------PGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G G G G G G+PG G PG+PG PG G G G G G G G+ G GP+G G+ G G G G+ G GP G G G+ G G GP GP G SGS G PGNPG G +G GA PG AG G+PG GT GT GA G G G G G G GS G G GPQG G PG PG G G AG + G G+ G G G++G +GP G PGT G PG G G PG GFPG+
Sbjct: 267 GEAGRNGNTGEVGFTGSPGARGFPGAPGLPGLKGHRGHKGLGGPKGEIGAPGAKGEAGPTGPMGAMGPLGPRGMPGERGRLGPQGAPGQRGAHGMPGKPGPMGPLGISGSPGFPGNPGMKGEAGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLIGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGS 532 HSP 5 Score: 94.3597 bits (233), Expect = 5.136e-16 Identity = 122/306 (39.87%), Postives = 144/306 (47.06%), Query Frame = 0
Query: 39 SSPAGYPGPRGPAGVNGWEGEPG---QHGIPGSDGNFGPPGTPGALGTPGT---------------------NGVPGSPGPPGPPGLPGQAG---TPGSHGVAGTAG---SFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGF 314
+ P G GP GP G G G PG G+PG+ G G PG G G+ GT G+ G PG PG PG G+AG PG HGV G G G RGP G PG+ G G G G G G G +G+PG G G GP G +G G G PG PG G PG G+ G PGV G G +G G+ G++G G G G G G G+PGP+G++G PG PG G AG +PGQ G G DG GP+GP G PG G +G G PG GF
Sbjct: 389 AGPTGARGPEGPQGQRGETGPPGPAGSQGLPGAMGTDGTPGAKGPTGSAGTSGPPGLIGPPGSPGPQGSTGPQGIRGQPGDPGVPGFKGEAGPKGEPGPHGVQGPIGPPGEEGKRGPRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGE------PGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAG------------VPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGF 676 HSP 6 Score: 91.6633 bits (226), Expect = 3.847e-15 Identity = 127/361 (35.18%), Postives = 146/361 (40.44%), Query Frame = 0
Query: 41 PAGYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGP---------------------PGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGT---PGSAGGSGLSGPVGQSGLAGPNGRNGIPGS---------------SGPNGPVGPAGPAG---------------TSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIG------------------------------GLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
P G PG GP G G G PG G PGSDG GP PG PG G PG G+ G+PG GP G G G PG G G GS G RG G+ PG G SG G G++G AG G+ G PG +G G GP GP G G G PG+PG+ GP G G G G G PG+ G G G +G G +GP G G G G G G+ G G G+ G+PGP G G G+ G GL G PG G+ G +G NGP G G G QG +G PG G PG
Sbjct: 505 PRGDPGTVGPPGPMGERGAPGNRGFPGSDGLPGPKGAQGERGPVGSSGPKGGQGDPGRPGEPGLPGARGLTGNPGVQGPEGKLGPLGAPGEDGRPGPPGSIGIRGQPGSMGLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKLGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGE 865 HSP 7 Score: 80.8777 bits (198), Expect = 6.668e-12 Identity = 123/299 (41.14%), Postives = 143/299 (47.83%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGE------PGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGP---------PGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGRNGIPGSSGPNGPVGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGT---------GGTMGASGSQGQNGPDGHDGKAGQDGSAGQAGVPGPQGATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGFPGN 317
G PGP+G +G G GE PGQ G PG DG GP G G G G G G PGP PGPPG G+ G G G G G G RG G PG G G++G G+ G+AG +G +G GS GP G VG GP G G G G G+ GP G G G+ G G G G G G +G +G+ GP G G G G+ G G GP GA G G GP G G G+ + G G G PG G G GP+GP G PG G +G G PG GFPG+
Sbjct: 615 GLPGPKGSSGDPGKPGEAGNAGVPGQRGAPGKDGEVGPSGPVGPPGLAGERGEQGPPGPTGFQGLPGPPGPPGEGGKLGDQGVPGDPGAVGPLGPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDTGSPGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGS 913 HSP 8 Score: 80.8777 bits (198), Expect = 8.615e-12 Identity = 89/210 (42.38%), Postives = 99/210 (47.14%), Query Frame = 0
Query: 46 GPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGL---------------SGPVGQSGLAGPNGRNGIPGSSGPNGP---VGPAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQNGPDGHDGKAGQDGSA 237
GPRG G G GEPG G+PG G G G G G+PG G G GPPG G+PG+ G G+ G G G G +G GT G+ G GL G G GL GP G G PGS G NGP VG AGP G G G G PG G G G+PG G+AG PG G G G G +G GP G G G G
Sbjct: 708 GPRGERGNPGERGEPGITGLPGEKGMAGGHGPDGPKGSPGPTGTVGDTGPPGLQGMPGERGIAGTPGPKGDRGGIGEKGAEGTAGNDGARGLPGPLGPPGPAGPTGEKGEPGPRGLVGPPGSRGNPGSRGENGPTGAVGFAGPQGPDGQPGVKGEPGEPGQKGDTGSPGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGSAGRV 917 HSP 9 Score: 77.7962 bits (190), Expect = 6.573e-11 Identity = 128/353 (36.26%), Postives = 143/353 (40.51%), Query Frame = 0
Query: 43 GYPGPRGPAGVNGWEGEPGQHGIPGSDGNFGPPGTPGALGTPGTNGVPGSPGPPGPPGLPGQAGTPGSHGVAGTAGSFGTRGPSGTPGSAGGSGLSGPVGQSGLAGPNGR---------------NGIPGSSGPNGPVG------------------------------------PAGPAGTSGSVGTPGNPGSGGPSGGFGAPGQAGVAGVPGVPGTGGTMGASGSQGQ------------------------NGPDGHDGKAGQDGSAGQ---AGVPGPQ---GATGVPGSPGPLGTAGTAGQAAQNGIGGLPGQPGRNGDDGGKGPNGPPGTPGTPGAQGLNGVPGFPGF 314
G PGPRG G PG G PGS G GP G A+G G G G PG G PG PGQ G GS G G AGS G GP G PG GG G GP G +G G GR G PG GP G G P GPAGT+G G G PGQ G G+PG+PG GT G G G GP G+DG G+DG+ G+ G PGP G++G PG+PGP+G G AGQ G G G PG+ G G GP GP G G G +G G G GF
Sbjct: 816 GEPGPRG------LVGPPGSRGNPGSRGENGPTG---AVGFAGPQGPDGQPGVKGEPGEPGQKGDTGSPGPQGLAGSPGPHGPMGVPGLKGGRGTQGPPGATGFPGSAGRVGPPGPAGAPGPAGPIGEPGKEGPPGLRGDPGSHGRVGDRGPAGPPGGPGDKGDPGEDGQPGPDGPPGPAGTTGQRGI------------VGMPGQRGERGMPGLPGPAGTPGKVGPTGATGDKGPPGPVGPPGSNGPVGEPGPEGPAGNDGTPGRDGAVGERGDRGDPGPAGLPGSSGAPGTPGPVGAPGDAGQRGDPGSRGPIGPPGQAGKRGLPGPQGPRGDKGDNGDRGDRGQKGHRGF 1147 The following BLAST results are available for this feature:
BLAST of collagen alpha-1 chain-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 24
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BLAST of collagen alpha-1 chain-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of collagen alpha-1 chain-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold476_size161517:151143..158522+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold476_size161517-snap-gene-0.39 ID=maker-scaffold476_size161517-snap-gene-0.39|Name=collagen alpha-1 chain-like|organism=Tigriopus kingsejongensis|type=gene|length=7380bp|location=Sequence derived from alignment at scaffold476_size161517:151143..158522+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'collagen alpha-1 chain-like' has the following synonyms
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