orphan nuclear receptor, maker-scaffold491_size156641-snap-gene-0.24 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 423.32 bits (1087), Expect = 2.697e-139 Identity = 210/281 (74.73%), Postives = 232/281 (82.56%), Query Frame = 0 Query: 318 NILRAALTGNSQISTQYKHLFVNRDAEKNSFD--------HMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 NILRAALTG+ I QY+ L +K +D +LIN LI+CDDFEDIATLKNIGELLNQNT+DLQQKLCQIGDSIVYKLVQWTRRLPFY +LPVDVHTKLLTHKWHELLVL SAYQAIHGS RMGT RTDGEK ELHQEV+TNLVTLQTCLTSMMGKPI+MDQL QDVGNMVEKIT+VIA+FRQ +L MEEYVCLKVIAMV D + SL I++RYL CL+A+ ++ P EP RV LLVRLPEV+VAA+LLLESKMFYVPFLLNSSI Sbjct: 512 NILRAALTGSPDIPRQYRGL-SKGPLDKRLYDPSYSPPDESSKLINELIICDDFEDIATLKNIGELLNQNTADLQQKLCQIGDSIVYKLVQWTRRLPFYRDLPVDVHTKLLTHKWHELLVLXXSAYQAIHGSKRMGTTRTDGEKVELHQEVATNLVTLQTCLTSMMGKPISMDQLWQDVGNMVEKITKVIAIFRQFRLTMEEYVCLKVIAMVSQEDLKATSLASIHDRYLNCLKAFTRKNFPREPHRVHDLLVRLPEVQVAASLLLESKMFYVPFLLNSSI 791 HSP 2 Score: 227.254 bits (578), Expect = 3.160e-65 Identity = 114/187 (60.96%), Postives = 126/187 (67.38%), Query Frame = 0 Query: 156 INMEKLWDGDRTQL------------------------------PANAKKLTEG-------TTQEGDDH----IEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNK--NKSSGKTG 299 +NMEKLW GDR+QL P + + + GD++ ++SL+CMICED+ATGLHYGIITCEGCKGFFKRTVQNKRIY CVADG CEINKAQRNRCQYCRFQKCL KGMVLAAVREDRMPGGRNSGAVYNMYKVKYKK+K N SSG TG Sbjct: 203 MNMEKLWAGDRSQLLDKMGPPPSSSTPSFLEMDNKGGLHIXSSXPTSXANINSNNPPPIHQSGGPGDNNNPSSQPQQSLVCMICEDRATGLHYGIITCEGCKGFFKRTVQNKRIYTCVADGECEINKAQRNRCQYCRFQKCLQKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKHKRANSSSGGTG 389
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000004451 (supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1 gene:EMLSAG00000004451 transcript:EMLSAT00000004451 description:"snap_masked-LSalAtl2s231-processed-gene-9.18") HSP 1 Score: 150.599 bits (379), Expect = 1.718e-39 Identity = 116/389 (29.82%), Postives = 186/389 (47.81%), Query Frame = 0 Query: 195 CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDA-------EKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENS----DSTSPSLV----PIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVR 568 C +C DK +G HYGI +CE CKGFFKRTVQNK+ Y C+ C + + R +C CRF KCL+ GM L A+REDR GGR++ Y+ Y T G ST T I ++ G+ +T+ K VN+ + E S +H+ + + + ++ + + ++ S+ Q L + D +YKLV+W + LP + + VD LL + W ELLV + Y+++ G IR L Q+ S NL + ++ +G V +EK+ R+ K+ EYV LKVI ++ ++ D+T V + ++ L++Y H+P P++ +LL+R+PE++ Sbjct: 155 CPVCGDKISGFHYGIFSCESCKGFFKRTVQNKKNYVCLRGSQCPVTISTRKKCPACRFDKCLNIGMKLEAIREDRTRGGRST------YQCSYNL-------PTTGVCSTNST--------TIPTIKRESRGDDH-NTETK---VNQSSGIPVLLHEIMSVEHLWFWSTSMPSLSLNNSSSNTDTSQ---ESPSNPVQTLTLLADKRLYKLVRWCKSLPLFKNILVDDQITLLINAWCELLVFSC-CYKSVDSP---GFIR-------LSQDKSLNLESAKS-----LG-----------VNECIEKMLNFSDQLRRLKVDHYEYVSLKVILLLTSAPLYVDATGLKEVDQVRESQEQVVQALQSYTNFHYPSMPNKFGELLLRMPELQ 488
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 135.576 bits (340), Expect = 3.753e-34 Identity = 61/96 (63.54%), Postives = 71/96 (73.96%), Query Frame = 0 Query: 186 DHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNS-GAVY 280 D +EE +C +C DK +G HYG++TCE CKGFFKRTVQNK++Y CVAD C I+K QR RC YCRFQKCL GM L AVR DRM GGRN G +Y Sbjct: 180 DGMEE---LCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKKVYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEAVRHDRMRGGRNKFGPMY 272
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5") HSP 1 Score: 133.65 bits (335), Expect = 8.686e-34 Identity = 101/417 (24.22%), Postives = 171/417 (41.01%), Query Frame = 0 Query: 172 NAKKLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLI--NNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTS-AYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDS--TSPSLVPIYNRYLKC-LRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYV 582 N+ LT + G + E ++C++C DK++G HYG TCEGCK FFKR V+ + C + C +++ RN+CQ+CRF+KCL+ GM AV++ R S ++N + N TG+S +ST L + + +Q+ NN+I D+ +C+ +++ ++W R +P + EL + LL W EL VL S + +H + + + V+ MD +R E++ ++ AL ++ E CLK I + T +L+ +C L Y HHP +P R KLL+RLP +R ++ ++E ++F++ Sbjct: 54 NSSSLTAPSPSSGTNSSTE--ILCVVCGDKSSGKHYGQFTCEGCKSFFKRCVRRSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKEAVQKGRT--TTTSAPIFNYSNDLFSPN----------------------------------TGSSYLSTYISLLLRAEPYTTSQYGQLQMAASNNIIGIDN------------------------ICEFAARLLFSAIEWARNIPGFPELQITDQVGLLRMVWSELFVLNASQCHMPLHVAPLLVAXGLHASPLAADRXVA------------------FMDHIRV----FQEQVEKLKAL----QVDAAEXACLKAIVLFSTDPPGLTDITLIEQLQEKSQCALDDYCKIHHPTKPSRFGKLLLRLPSLRTVSSAVIE-QLFFI 381
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000013004 (supercontig:LSalAtl2s:LSalAtl2s98:942409:953748:1 gene:EMLSAG00000013004 transcript:EMLSAT00000013004 description:"augustus_masked-LSalAtl2s98-processed-gene-9.1") HSP 1 Score: 115.161 bits (287), Expect = 5.106e-27 Identity = 49/83 (59.04%), Postives = 59/83 (71.08%), Query Frame = 0 Query: 192 SLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGR 274 SL+C +C D A HYG+ TCEGCKGFFKRTVQ Y C+AD +C ++K +RNRCQ+CRFQKCL GMV VR D + G R Sbjct: 406 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRR 488
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10") HSP 1 Score: 112.849 bits (281), Expect = 1.169e-26 Identity = 78/249 (31.33%), Postives = 113/249 (45.38%), Query Frame = 0 Query: 186 DHIEEES---LICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLT 431 D I+EE C++C D A+G HYG+ +CE CK FFKRT+Q Y A CEINK +R CQ CRFQKCL GM+ VR DR+ GGR KY++ E+ + P + L N K L V R E +F L+N + +++ I T+ + + N+ IG ++W +++P + L ++ KLL W E+LVL+ Sbjct: 259 DIIKEEEGQRRTCLVCGDIASGFHYGVSSCEACKAFFKRTIQGNIEYTXPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQ----------KYRR--------------MIESSPYIQPPP-----KKTLEDN-------KLLQVLRHCEPEAF----LVNMDMTLPNYK-IRTISTLSDFYNREL---------IG------TIEWAKQIPGFSNLTINDQMKLLQSSWSEILVLS 451
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 105.531 bits (262), Expect = 1.649e-24 Identity = 45/79 (56.96%), Postives = 56/79 (70.89%), Query Frame = 0 Query: 194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPG 272 C IC D+A+G HYG+ +CEGCKGFFKRTV+ + Y C + C I+K QRNRCQYCR+ KCL GM AV+E+R G Sbjct: 90 FCSICGDRASGKHYGVYSCEGCKGFFKRTVRKELTYACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKREAVQEERHRG 168
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8") HSP 1 Score: 104.375 bits (259), Expect = 1.295e-23 Identity = 76/309 (24.60%), Postives = 129/309 (41.75%), Query Frame = 0 Query: 195 CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVL-------------AAVREDRMP---------------------GGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAAL-------------TGNSQISTQYKHL---FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKL--------------------CQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTS 433 C++C D+A+G HYG I+CEGCKGFFKR+++ + Y C + CE+ K RNRCQYCR QKCL GM + +AV+ +R P +NS VY++Y ++N S G + I + +H ++ + +L + T ++ Y HL V EK+ + +C+D E+ ++++ + +Q L C+ +++ V W R +P + +L + L+ + W ++ VL S Sbjct: 220 CVVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMRIMKQIYESYLAPRVSAVQSERRPIVPANVSNAVTAALAENISISNAKNSSPVYHIYDSPTLLSRN-SLGPSSDSILS--SHDTNVKAASTIVLGSGGIGSGGIGDEDNTSTDAGSLNGDYSHLDASHVLAAREKSLISXAMDVMTKTICEDEEEEPNEDINNSSIDESETIIQDSLVNFKLSTPSPTPFYLNVHFICETASRLLFLSVHWVRTIPCFGQLSYESQVGLVRNSWSDIFVLGMS 525
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11") HSP 1 Score: 99.7525 bits (247), Expect = 6.332e-23 Identity = 66/260 (25.38%), Postives = 103/260 (39.62%), Query Frame = 0 Query: 170 PANAKKLTEGTTQEGDDHIEEESLI-CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELL 428 PA + + + E S I C++C DK++G HYG TCEGCK FFKR+V+ Y C +C +++ RN+CQ+CR +KC GM AV+ R+P G G S+ L+G + +S+ L + + M + N ++ ++NI C+ +++ V+WTR +P + EL V LL W EL Sbjct: 57 PAISSGIVASIEHAKPSELSESSDINCVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRNLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMRREAVQRGRVP--------------------PTPQGVFGLGFSSD-----------------PLSGTTYLSSYISMLLRAEPYPTSRYGQMPMPTNGMI--------GIENI---------------CEFAARLLFSAVEWTRSIPGFPELQVTDQVALLRLVWSELF 256
BLAST of orphan nuclear receptor vs. L. salmonis genes
Match: EMLSAG00000007361 (supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1 gene:EMLSAG00000007361 transcript:EMLSAT00000007361 description:"maker-LSalAtl2s418-augustus-gene-3.13") HSP 1 Score: 98.9821 bits (245), Expect = 4.804e-22 Identity = 67/252 (26.59%), Postives = 115/252 (45.63%), Query Frame = 0 Query: 195 CMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLL-THKWHELLVLTTSAYQAIHGSTRMG 445 C +C D+ATG HYG +C+GCKGFF+R+V+ +R+Y C + C +NK +RN C+YCR + C+ GM +AV+ +R ++ +K + + E++ D Q ++L + + GN I+T N E+N + QL A++++IG + + + LV+W + + + EL VD +LL H LL+ ++G +G Sbjct: 151 CAVCGDRATGKHYGAASCDGCKGFFRRSVRKERVYGCRQNRACIVNKDKRNNCRYCRLKMCIKAGMKKSAVQNER-------------DRISCRKKTSAKDMNSANELTVTALLNADKVGQK-SLLNSIVGGN--INTN------NFITEENVLANKQL-------------ASIEDIGHSMKEQ---------------LIVLVEWAKHIKAFCELSVDDQVRLLRAHSGEHLLMGVAKRSMNLNGILLLG 352
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|52788288|sp|Q90416.2|RXRGA_DANRE (RecName: Full=Retinoic acid receptor RXR-gamma-A; AltName: Full=Nuclear receptor subfamily 2 group B member 3-A; AltName: Full=Retinoic acid receptor RXR-alpha; AltName: Full=Retinoid X receptor alpha; AltName: Full=Retinoid X receptor gamma-A) HSP 1 Score: 150.984 bits (380), Expect = 1.238e-38 Identity = 105/393 (26.72%), Postives = 173/393 (44.02%), Query Frame = 0 Query: 194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKI-TRVIALFRQCKLKMEEYVCLKVIAMVENSDS---TSPSLV-PIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFY 581 IC IC D+++G HYG+ +CEGCKGFFKRT++ Y C + C+I+K QRNRCQYCR+QKCL GM AV+E+ + + ++ E+ + + +MP + I L A L E + +M+ ++ +T+D +CQ D ++ LV+W +R+P + +LP+D LL W+ELL+ + S + + G + G LH S+ VG++ +++ T +++ R ++ E CL+ I + N D+ ++PS V + + L Y ++P +P R KLL+RLP +R LE F+ Sbjct: 116 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCQIDKRQRNRCQYCRYQKCLAMGMKREAVQEE----------------------RQRGRERSDNEVDSSSSFNEEMPVEKI--LDAELA-----------------VEPKTEAYME---------------------SSMSNSTNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSV---TVKDGILLATG----LHVHRSS--------------------AHSAGVGSIFDRVLTELVSKMRDMQMDKTELGCLRAIVLF-NPDAKGLSNPSEVEALREKVYASLEGYTKHNYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFF 418
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|52783388|sp|Q7SYN5.1|RXRBA_DANRE (RecName: Full=Retinoic acid receptor RXR-beta-A; AltName: Full=Nuclear receptor subfamily 2 group B member 2-A; AltName: Full=Retinoid X receptor beta-A) HSP 1 Score: 151.369 bits (381), Expect = 1.534e-38 Identity = 110/394 (27.92%), Postives = 179/394 (45.43%), Query Frame = 0 Query: 194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQL-RQDVGNMVEKI-TRVIALFRQCKLKMEEYVCLKVIAMVENSDS---TSPSLVPIY-NRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFY 581 +C IC D+++G HYG+ +CEGCKGFFKRTV+ Y C + C ++K QRNRCQYCR+QKCL GM V+++R V+ ++ +NK + GE+ + +MP + IL A + E L G + +D +CQ D ++ LV+W +R+P + EL +D LL W+ELL+ + S +++I + + G + G LH V + ++ +G + +VG + +++ T +++ R ++ E CL+ I + N D+ +SPS V + + L AY Q +P + R KLL+RLP +R LE F+ Sbjct: 124 LCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYCRYQKCLAMGMKREVVQDER------------QRSVQEERQRNK---ERDGEVESSSAANEEMPVE--KILEAEMA-------------------------------------VEQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELSLDDQVILLRAGWNELLIASFS-HRSI--TVKDGILLATG----LH-------VHRNSAHSAGVGAIFDRESAHNAEVGAIFDRVLTELVSKMRDMQMDKTELGCLRAIILF-NPDAKGLSSPSEVELLREKVYASLEAYCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFF 448
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|82200328|sp|Q6DHP9.1|RXRGB_DANRE (RecName: Full=Retinoic acid receptor RXR-gamma-B; AltName: Full=Nuclear receptor subfamily 2 group B member 3-B; AltName: Full=Retinoid X receptor gamma-B) HSP 1 Score: 149.058 bits (375), Expect = 6.688e-38 Identity = 106/393 (26.97%), Postives = 163/393 (41.48%), Query Frame = 0 Query: 194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKI-TRVIALFRQCKLKMEEYVCLKVIAMVENSD----STSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFY 581 IC IC D+++G HYG+ +CEGCKGFFKRT++ Y C C I+K QRNRCQYCR+QKCL GM AV+E+R G K+ E+ T DMP I ++++S + K + NS T+D +C D ++ LV+W +R+P + +LP+D LL W+ELL+ + S H S + G +H+ + + VG++ ++ T +++ + ++ E CL+ I + N D S S + + + L Y Q +P +P R KLL+RLP +R LE F+ Sbjct: 127 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDIKECLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKE----------------------KSDTEVETTSRFNEDMPVDKIL--------DAELSVEPKTETYTESSPSNS--------------------------------TNDPVTNICHAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFS-----HRSITVKDGILLGTGLHVHRSSAHS----------------------AGVGSIFNRVLTELVSKMKDMQMDKTELGCLRAIVLF-NPDAKGLSNSLEVEALREKVYASLETYTKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFF 429
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|167016572|sp|Q0GFF6.2|RXRG_PIG (RecName: Full=Retinoic acid receptor RXR-gamma; AltName: Full=Nuclear receptor subfamily 2 group B member 3; AltName: Full=Retinoid X receptor gamma) HSP 1 Score: 148.673 bits (374), Expect = 9.118e-38 Identity = 109/393 (27.74%), Postives = 174/393 (44.27%), Query Frame = 0 Query: 194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKI-TRVIALFRQCKLKMEEYVCLKVIAMVENSDS---TSPSLV-PIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFY 581 IC IC D+++G HYG+ +CEGCKGFFKRT++ IY C + C I+K QRNRCQYCR+QKCL GM AV+E+R +S + E + DMP + IL A L + + S+ M + N +T+D +C D ++ LV+W +R+P + +L ++ LL W+ELL+ + S ++++ S + G + G LH S+ VG++ +++ T +++ + ++ E CL+ I + N D+ ++PS V + + L AY Q +P +P R KLL+RLP +R LE F+ Sbjct: 138 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAVQEER----------------------QRSRERAESEAECASSGHEDMPVE--RILEAELA---------------VEPKTESYGDMNMEN-----------------------STNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFS-HRSV--SVQDGILLATG----LHVHRSS--------------------AHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLF-NPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFF 440
BLAST of orphan nuclear receptor vs. SwissProt
Match: gi|75062013|sp|Q5REL6.1|RXRG_PONAB (RecName: Full=Retinoic acid receptor RXR-gamma; AltName: Full=Nuclear receptor subfamily 2 group B member 3; AltName: Full=Retinoid X receptor gamma) HSP 1 Score: 148.673 bits (374), Expect = 1.006e-37 Identity = 109/393 (27.74%), Postives = 174/393 (44.27%), Query Frame = 0 Query: 194 ICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKI-TRVIALFRQCKLKMEEYVCLKVIAMVENSDS---TSPSLV-PIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFY 581 IC IC D+++G HYG+ +CEGCKGFFKRT++ IY C + C I+K QRNRCQYCR+QKCL GM AV+E+R +S + E + DMP + IL A L + + S+ M + N +T+D +C D ++ LV+W +R+P + +L ++ LL W+ELL+ + S ++++ S + G + G LH S+ VG++ +++ T +++ + ++ E CL+ I + N D+ ++PS V + + L AY Q +P +P R KLL+RLP +R LE F+ Sbjct: 138 ICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLIYTCRDNKDCLIDKRQRNRCQYCRYQKCLVMGMKREAVQEER----------------------QRSRERAESEAECASSGHEDMPVE--RILEAELA---------------VEPKTESYGDMNMEN-----------------------STNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVILLRAGWNELLIASFS-HRSV--SVQDGILLATG----LHVHRSS--------------------AHSAGVGSIFDRVLTELVSKMKDMQMDKSELGCLRAIVLF-NPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLLLRLPALRSIGLKCLEHLFFF 440
BLAST of orphan nuclear receptor vs. nr
Match: gi|657600392|gb|AID52857.1| (hormone receptor 4 [Tigriopus japonicus]) HSP 1 Score: 734.176 bits (1894), Expect = 0.000e+0 Identity = 373/505 (73.86%), Postives = 414/505 (81.98%), Query Frame = 0 Query: 99 HHRLSEQAQ---KISSAVDGMLSLQSANTVARV------SSSGSSMEKVFPVCPRSEGSSYTRGIPINMEKLWDGDRTQLPANAKKLTEGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKT----GGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 HH + Q K+S+AVDG+LSLQS + R S+S +S+ + V P SY RG+PINMEKLW+GD++QLP +E T + E+E LICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVA+G CEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYN+YKVKYKK+K S G++ I+ E QF+ QNINILRAALTGN +IS+ YK + N +++ LIN LI CD+FED+ATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLV+WTRRLPFY ELPVD+HTKLLTHKWHELLVLTTSAYQAIHGS RMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKIT+VIALFRQCKLKMEEYVCLKVIAMV +D+ SPSLV I+NRYL CL+A+A QHHP EP+RV+ LLVRLPEVRVAA LLLESKMFYVPFLLNSSI Sbjct: 160 HHDMGSNEQHALKMSNAVDGLLSLQSGGPLTRFPQEMPQSTSQTSITEEIRVNP----PSYARGLPINMEKLWEGDKSQLPTQTTAKSEETDGKVGLAEEDEPLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVAEGSCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNLYKVKYKKHKKSSPGRSEMYGSKPINDLEVAQFNSHSQNINILRAALTGNVEISSHYKSILGRCQNHVNDQENINLINELIACDEFEDMATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVEWTRRLPFYKELPVDIHTKLLTHKWHELLVLTTSAYQAIHGSRRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITKVIALFRQCKLKMEEYVCLKVIAMVATADNPSPSLVTIHNRYLACLKAFAQQHHPQEPNRVENLLVRLPEVRVAAGLLLESKMFYVPFLLNSSI 660
BLAST of orphan nuclear receptor vs. nr
Match: gi|242009214|ref|XP_002425386.1| (orphan nuclear receptor nr6a1, putative [Pediculus humanus corporis] >gi|212509180|gb|EEB12648.1| orphan nuclear receptor nr6a1, putative [Pediculus humanus corporis]) HSP 1 Score: 538.11 bits (1385), Expect = 2.508e-180 Identity = 268/468 (57.26%), Postives = 336/468 (71.79%), Query Frame = 0 Query: 155 PINMEKLWDGDRTQLPANAKKLT----------------EGTTQEG----DDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNK------SSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 P+NME+LW GD TQLP + + +G T G D +E+ +ICMICED+ATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG+CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV ++ NK ++ + G + + + + +P +N IL+ ALT S++ + L +RD + +I L+ CD+F+DIATL+N+ +LL+ SDL +KLCQIGDSIVYKLVQWT+RLPFY ELPV+VHT+LLTHKWHELLVLTTSAYQAIHG ++ + T G++A+ QEVS NLVTLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL+MEEYVCLKVI M+ S L I +RY+ CL+++ P +P R +LL+RLPE++ AA+LLLESKMFYVPFLLNS+I Sbjct: 310 PLNMERLWAGDLTQLPVSQQNQALNLALPPGDWPRDGRPQGITIIGEPKHDPEDDEQPMICMICEDRATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGNCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVLMRERDNKFLNVIFNNNEKGNQQKSSISSEQTLPSHIVNGTILKTALTNPSEVVHLRQRLDNTVSSSRDRTFPLDTILNMIQALVDCDEFQDIATLRNLEDLLDHK-SDLSEKLCQIGDSIVYKLVQWTKRLPFYLELPVEVHTRLLTHKWHELLVLTTSAYQAIHGVHKLSSTSTAGQEADFTQEVSNNLVTLQTCLTSMMGRPITMDQLRQDVGLMVEKITHVTLMFRRVKLRMEEYVCLKVITMLNQGRGGSNELEAIQDRYMMCLKSFVEHSFPQQPARFHELLLRLPEIQSAASLLLESKMFYVPFLLNSAI 776
BLAST of orphan nuclear receptor vs. nr
Match: gi|1325293207|ref|XP_023330232.1| (hormone receptor 4-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 542.732 bits (1397), Expect = 5.507e-179 Identity = 277/483 (57.35%), Postives = 343/483 (71.01%), Query Frame = 0 Query: 156 INMEKLWDGDRTQLPANAKK----LTEGTTQEGDDHIEEES--LICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKNKNKSSGKTG-------GEISTKETHQFDMP-------------------------------CQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMV-ENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSIVGS 593 ++M +LW G+ QLPA A+ + + G+ ++E+ +ICMIC+DKATGLHYGIITCEGCKGFFKRTVQNKR+Y CVADG+CEINKAQRNRCQYCRFQKCL +GMVLAAVREDRMPGGRNSGAVYNMYKVKYKK K + G + E Q D P +INIL+A LTG+ + QY+ R E+ D ++LI LI CDDFEDI+T +++ +LL+ + ++L +L +IGD+IV KLVQWTRRLPFY ++PV++HT LLT+KWHELLVLTTS+YQAI+GS RMGT R+DGE AELHQEV+TNLVTLQTCLTSMMG+PITMDQLRQDVGNMVEK+T+VI R +L +EEYVCLKV+AM+ E+ L I++RY+ CL+ Y + P +P+RV +LLV+LPEV+ AA LLL SKMFYVPFLLNS+I S Sbjct: 544 VDMAELWKGNLDQLPAQAQPSGSIFNRDSGEPGNRILDEDDQPMICMICDDKATGLHYGIITCEGCKGFFKRTVQNKRVYTCVADGNCEINKAQRNRCQYCRFQKCLERGMVLAAVREDRMPGGRNSGAVYNMYKVKYKKQKKHPKPQMGQFNVMSKPSMKNIEFEQMDSPKSLLNLREEQKTASFQSTSLSSPSSPHPDTISPSINILKAVLTGSQEGLPQYRQFDRARRRERYE-DSLRLIQELIDCDDFEDISTFRDVNDLLDHSNAELSDRLSRIGDNIVVKLVQWTRRLPFYEDIPVNIHTSLLTNKWHELLVLTTSSYQAINGSRRMGTTRSDGETAELHQEVATNLVTLQTCLTSMMGRPITMDQLRQDVGNMVEKVTKVITSLRNFRLTIEEYVCLKVVAMLTEDGLVQHSELEEIHDRYMNCLKIYTEWNFPTQPNRVQELLVKLPEVQEAAGLLLASKMFYVPFLLNSTISSS 1025
BLAST of orphan nuclear receptor vs. nr
Match: gi|1325293212|ref|XP_023330233.1| (hormone receptor 4-like isoform X2 [Eurytemora affinis]) HSP 1 Score: 541.576 bits (1394), Expect = 1.403e-178 Identity = 269/481 (55.93%), Postives = 341/481 (70.89%), Query Frame = 0 Query: 156 INMEKLWDGDRTQLPANAKK----LTEGTTQEGDDHIEEES--LICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNM----------------YKVKYK--------------------KNKNKSSGKTGGEISTKETHQFDMPCQNINILRAALTGNSQISTQYKHLFVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMV-ENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSIVGS 593 ++M +LW G+ QLPA A+ + + G+ ++E+ +ICMIC+DKATGLHYGIITCEGCKGFFKRTVQNKR+Y CVADG+CEINKAQRNRCQYCRFQKCL +GMVLAAVREDRMPGGRNSGAVYNM + V K + + K++ +S+ + D +INIL+A LTG+ + QY+ R E+ D ++LI LI CDDFEDI+T +++ +LL+ + ++L +L +IGD+IV KLVQWTRRLPFY ++PV++HT LLT+KWHELLVLTTS+YQAI+GS RMGT R+DGE AELHQEV+TNLVTLQTCLTSMMG+PITMDQLRQDVGNMVEK+T+VI R +L +EEYVCLKV+AM+ E+ L I++RY+ CL+ Y + P +P+RV +LLV+LPEV+ AA LLL SKMFYVPFLLNS+I S Sbjct: 544 VDMAELWKGNLDQLPAQAQPSGSIFNRDSGEPGNRILDEDDQPMICMICDDKATGLHYGIITCEGCKGFFKRTVQNKRVYTCVADGNCEINKAQRNRCQYCRFQKCLERGMVLAAVREDRMPGGRNSGAVYNMYKYKKQKKHPKPQMGQFNVMSKPSMKNIEFEQMDSPKSLLNLREEQKTASFQSTSLSSPSSPHPDTISPSINILKAVLTGSQEGLPQYRQFDRARRRERYE-DSLRLIQELIDCDDFEDISTFRDVNDLLDHSNAELSDRLSRIGDNIVVKLVQWTRRLPFYEDIPVNIHTSLLTNKWHELLVLTTSSYQAINGSRRMGTTRSDGETAELHQEVATNLVTLQTCLTSMMGRPITMDQLRQDVGNMVEKVTKVITSLRNFRLTIEEYVCLKVVAMLTEDGLVQHSELEEIHDRYMNCLKIYTEWNFPTQPNRVQELLVKLPEVQEAAGLLLASKMFYVPFLLNSTISSS 1023
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683917|ref|XP_014286562.1| (PREDICTED: hormone receptor 4 isoform X5 [Halyomorpha halys]) HSP 1 Score: 523.857 bits (1348), Expect = 1.648e-176 Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0 Query: 146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 EGSS + G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 168 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 642
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683920|ref|XP_014286563.1| (PREDICTED: hormone receptor 4 isoform X6 [Halyomorpha halys]) HSP 1 Score: 523.087 bits (1346), Expect = 2.235e-176 Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0 Query: 146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 EGSS + G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 161 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 635
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683914|ref|XP_014286561.1| (PREDICTED: hormone receptor 4 isoform X4 [Halyomorpha halys]) HSP 1 Score: 523.472 bits (1347), Expect = 3.363e-176 Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0 Query: 146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 EGSS + G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 181 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 655
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683912|ref|XP_014286560.1| (PREDICTED: hormone receptor 4 isoform X3 [Halyomorpha halys]) HSP 1 Score: 523.087 bits (1346), Expect = 4.452e-176 Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0 Query: 146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 EGSS + G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 185 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 659
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683905|ref|XP_014286557.1| (PREDICTED: hormone receptor 4 isoform X1 [Halyomorpha halys]) HSP 1 Score: 523.472 bits (1347), Expect = 6.255e-176 Identity = 273/463 (58.96%), Postives = 328/463 (70.84%), Query Frame = 0 Query: 153 GIPINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 214 GRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 673
BLAST of orphan nuclear receptor vs. nr
Match: gi|939683908|ref|XP_014286558.1| (PREDICTED: hormone receptor 4 isoform X2 [Halyomorpha halys]) HSP 1 Score: 523.087 bits (1346), Expect = 7.625e-176 Identity = 277/478 (57.95%), Postives = 333/478 (69.67%), Query Frame = 0 Query: 146 EGSSYTRGI--------PINMEKLWDGDRTQLPANAKKLT------------EGTTQEGDDHIEEESLICMICEDKATGLHYGIITCEGCKGFFKRTVQNKRIYNCVADGHCEINKAQRNRCQYCRFQKCLHKGMVLAAVREDRMPGGRNSGAVYNMYKV-------KYKKNKNKSSGKTGGEISTKETHQFDMPCQNIN--ILRAALTGNSQISTQYKHL----FVNRDAEKNSFDHMQLINNLIVCDDFEDIATLKNIGELLNQNTSDLQQKLCQIGDSIVYKLVQWTRRLPFYHELPVDVHTKLLTHKWHELLVLTTSAYQAIHGSTRMGTIRTDGEKAELHQEVSTNLVTLQTCLTSMMGKPITMDQLRQDVGNMVEKITRVIALFRQCKLKMEEYVCLKVIAMVENSDSTSPSLVPIYNRYLKCLRAYATQHHPLEPDRVDKLLVRLPEVRVAAALLLESKMFYVPFLLNSSI 590 EGSS + G +NME+LW GD +QLP A++LT + QEGD E++ +ICMICEDKATGLHYGIITCEGCKGFFKRTVQN+R+Y CVADG CEI KAQRNRCQYCRF+KC+ +GMVL AVREDRMPGGRNSGAVYN+YKV + + K G + + E MP +N IL+ ALT S++ + L +RD + + +I LI CD+F+DIATL+N+ +LL+ SDL KL QIGDSIVYKLVQWT+RLPFY ELPV+VHTKLLTH WHELLVLTTSAYQAIHG+ R+ + +DG +A QEVS NL TLQTCLTSMMG+PITMDQLRQDVG MVEKIT V +FR+ KL M+EYVCLKVI M+ S + L + RY+ CLR Y P +P+R LL+RLPEV+ AA+LLLESKMFYVPFLLNS+I Sbjct: 194 EGSSISPGAVTGSASGRSLNMERLWAGDLSQLPG-AQQLTALNLSWAKPGLHQDKQQEGDIEEEDQPMICMICEDKATGLHYGIITCEGCKGFFKRTVQNRRVYTCVADGVCEITKAQRNRCQYCRFKKCIEQGMVLQAVREDRMPGGRNSGAVYNLYKVKYKKHKKSVRNGQMKGQADKGKPLISPEPASH-MPPHLVNGTILKTALTNPSEVVHLRQRLDSAVSSSRDRALSVDTTLSVIQTLIDCDEFQDIATLRNLEDLLDHK-SDLSDKLMQIGDSIVYKLVQWTKRLPFYLELPVEVHTKLLTHTWHELLVLTTSAYQAIHGAHRLVSTGSDGTEANFTQEVSNNLCTLQTCLTSMMGRPITMDQLRQDVGLMVEKITYVTLMFRRIKLTMQEYVCLKVIIMLNPSRGDANELEAMQERYMTCLRTYVEHSFPNQPNRFHDLLLRLPEVQSAASLLLESKMFYVPFLLNSTI 668 The following BLAST results are available for this feature:
BLAST of orphan nuclear receptor vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of orphan nuclear receptor vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of orphan nuclear receptor vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold491_size156641:8337..11777+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold491_size156641-snap-gene-0.24 ID=maker-scaffold491_size156641-snap-gene-0.24|Name=orphan nuclear receptor|organism=Tigriopus kingsejongensis|type=gene|length=3441bp|location=Sequence derived from alignment at scaffold491_size156641:8337..11777+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'orphan nuclear receptor' has the following synonyms
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