60s ribosomal protein l17, maker-scaffold505_size153196-snap-gene-0.21 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 60s ribosomal protein l17 vs. L. salmonis genes
Match: EMLSAG00000006484 (supercontig:LSalAtl2s:LSalAtl2s354:78083:78928:-1 gene:EMLSAG00000006484 transcript:EMLSAT00000006484 description:"augustus_masked-LSalAtl2s354-processed-gene-0.5") HSP 1 Score: 303.908 bits (777), Expect = 6.348e-105 Identity = 158/190 (83.16%), Postives = 172/190 (90.53%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTDQGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQKNAAGTLPDKKKVSQKKLKRQKQQMDRTESAI 307 MGRYATEPDNP+KSAKA+GSNLRVHFKNTRE+AQAIKKM L+RA TYLKNVI QKEI+PFRRF GGVGRHAQAK T QGRWPKKSAEFLLHLLKNAESNAE+KGLDVDH+VIDHIQVNRAP+MRRRTYRAHGRINPYMSSPCHIEV LVEKEQ F K + T P+KKKVSQKKLK+QK Q+DR+E + Sbjct: 1 MGRYATEPDNPTKSAKARGSNLRVHFKNTRESAQAIKKMPLHRATTYLKNVINQKEIIPFRRFMGGVGRHAQAKVHGTSQGRWPKKSAEFLLHLLKNAESNAEFKGLDVDHLVIDHIQVNRAPHMRRRTYRAHGRINPYMSSPCHIEVVLVEKEQAFSKVPSDT-PEKKKVSQKKLKKQKLQVDRSEGVM 189
BLAST of 60s ribosomal protein l17 vs. L. salmonis genes
Match: EMLSAG00000010006 (supercontig:LSalAtl2s:LSalAtl2s657:263562:273288:1 gene:EMLSAG00000010006 transcript:EMLSAT00000010006 description:"snap_masked-LSalAtl2s657-processed-gene-2.0") HSP 1 Score: 80.4925 bits (197), Expect = 1.104e-19 Identity = 43/70 (61.43%), Postives = 49/70 (70.00%), Query Frame = 0 Query: 182 GGVGRHAQAKAFKTDQGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNR-APYMRRRTYRAH 250 GGVG HAQ R P K A+FL HLLKNAESN + GLDV+++VIDHIQVN P+MRRRTY AH Sbjct: 2 GGVGSHAQT------LDRLPMKYAKFLHHLLKNAESNGLFNGLDVNNLVIDHIQVNFCVPHMRRRTYNAH 65
BLAST of 60s ribosomal protein l17 vs. L. salmonis genes
Match: EMLSAG00000004261 (supercontig:LSalAtl2s:LSalAtl2s222:430588:439695:1 gene:EMLSAG00000004261 transcript:EMLSAT00000004261 description:"snap-LSalAtl2s222-processed-gene-5.14") HSP 1 Score: 64.6994 bits (156), Expect = 1.242e-12 Identity = 41/103 (39.81%), Postives = 55/103 (53.40%), Query Frame = 0 Query: 209 LHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQKNAAGTLPDKKKVSQKKLKRQKQQMDRTESAICSCH 311 LH + S +K L DH+VIDHIQVNRAP+MR RT R ++V LVEK Q+F + GT P KKKV Q ++ ++ + + I CH Sbjct: 15 LHCMNVLISIGVFKVLAEDHLVIDHIQVNRAPHMRCRTQR--------------VQVVLVEKRQSFSQVPCGT-PKKKKVYQLEV----EEAEASSRCIQRCH 98
BLAST of 60s ribosomal protein l17 vs. L. salmonis genes
Match: EMLSAG00000007996 (supercontig:LSalAtl2s:LSalAtl2s475:152670:152945:1 gene:EMLSAG00000007996 transcript:EMLSAT00000007996 description:"snap_masked-LSalAtl2s475-processed-gene-1.3") HSP 1 Score: 56.225 bits (134), Expect = 1.407e-10 Identity = 37/78 (47.44%), Postives = 47/78 (60.26%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKG----SNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAK 191 MG Y TE D P+K AKA SNLR +F+N E+A IKKM R T LKNVI +K+I+ RF G+ HA+ + Sbjct: 1 MGFYTTEHDTPTKYAKAYAKAYASNLRFNFRNIGESAPVIKKMLSQRDTTCLKNVIREKKIISICRFIQGLDLHAKIR 78
BLAST of 60s ribosomal protein l17 vs. L. salmonis genes
Match: EMLSAG00000000262 (supercontig:LSalAtl2s:LSalAtl2s103:1234959:1237071:-1 gene:EMLSAG00000000262 transcript:EMLSAT00000000262 description:"snap_masked-LSalAtl2s103-processed-gene-12.0") HSP 1 Score: 53.5286 bits (127), Expect = 5.903e-10 Identity = 32/60 (53.33%), Postives = 39/60 (65.00%), Query Frame = 0 Query: 242 MRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQKNAAGTLPDKKKVSQKKLKRQKQQMD 301 M RRTY A RIN Y+S PC IEV LV+KE+ F N P+K+KVS +K QK QM+ Sbjct: 1 MIRRTYLALRRINSYLSYPCQIEVVLVKKEKAF-FNVPSDTPEKEKVS---IKNQKLQMN 56
BLAST of 60s ribosomal protein l17 vs. SwissProt
Match: gi|171769787|sp|A2I3Y6.1|RL17_MACHI (RecName: Full=60S ribosomal protein L17) HSP 1 Score: 241.121 bits (614), Expect = 9.524e-79 Identity = 125/185 (67.57%), Postives = 147/185 (79.46%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTDQGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQKNAAGTLPDKKKVSQKKLKRQKQQMDR 302 MG+YA NP+KS +A+GSNLRVHFKNTRETA+ IK+M L RA+ +LKNV ++E VPFRRF GGVGR AQAK + T QGRWP KSA+FLL LL+NAESNAE+KGLD D + I+HIQVNRAP +RRRTYRAHGRINPYMSSPCHIEV L EK Q + + KKKVS+KKL RQK++M R Sbjct: 1 MGKYAKNARNPAKSCRARGSNLRVHFKNTRETAKTIKRMPLRRAIQFLKNVQDKQECVPFRRFNGGVGRCAQAKQWGTTQGRWPIKSAQFLLELLRNAESNAEFKGLDSDRLFIEHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVILTEK-QKYVGKVSHDDSQKKKVSKKKLARQKEKMMR 184
BLAST of 60s ribosomal protein l17 vs. SwissProt
Match: gi|75021628|sp|Q9BL19.1|RL17_CAEEL (RecName: Full=60S ribosomal protein L17) HSP 1 Score: 235.343 bits (599), Expect = 1.676e-76 Identity = 114/176 (64.77%), Postives = 132/176 (75.00%), Query Frame = 0 Query: 121 YATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTDQGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQKNAAGTLPDKKKVSQKKLKRQ 296 Y+ P+N +KS KA+GS+LRVHFKNT E A A++ M L RA +L +V KEIVPFRRF GG+GR AQ K + T QGRWP KSA+FLL LLKNAESNAEYKGLDVDH+VI+HI V RA +RRRTYRAHGRINPYMSSPCHIEV L EKE K P KK S++K +RQ Sbjct: 6 YSRAPENSTKSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRFHGGIGRAAQTKQWNTTQGRWPVKSADFLLDLLKNAESNAEYKGLDVDHLVIEHINVQRAAKLRRRTYRAHGRINPYMSSPCHIEVILAEKEDVVSKPTDDAAPKVKKESKRKQRRQ 181
BLAST of 60s ribosomal protein l17 vs. SwissProt
Match: gi|74902098|sp|Q5I5J1.1|RL17_PECGU (RecName: Full=60S ribosomal protein L17) HSP 1 Score: 224.557 bits (571), Expect = 2.977e-72 Identity = 102/159 (64.15%), Postives = 125/159 (78.62%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTDQGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQK 276 M RY P+NP++ KAKG+N RVH+KNT ET +AIK M L++A +YL NV+ K+ +PFRR +GGVGR AQAK F T QGRWPKKS EF+L LLKNAESNAE +GLDVD +V+ H+ V+ A MRRRTYRAHGRINPYMSSPCHIE+CL E+++ K Sbjct: 1 MARYKFNPENPNRVCKAKGTNFRVHYKNTSETGRAIKGMHLHKARSYLSNVVEHKQCIPFRRHKGGVGRCAQAKNFNTTQGRWPKKSCEFMLQLLKNAESNAELRGLDVDSLVVAHVSVDAAAKMRRRTYRAHGRINPYMSSPCHIELCLEERDRVVPK 159
BLAST of 60s ribosomal protein l17 vs. SwissProt
Match: gi|3914685|sp|O48557.1|RL17_MAIZE (RecName: Full=60S ribosomal protein L17) HSP 1 Score: 219.164 bits (557), Expect = 2.552e-70 Identity = 106/171 (61.99%), Postives = 134/171 (78.36%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTD-QGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQKNAAGTLPDKKK 287 M +Y+ EP NP+KSAKA G +LRVHFKNTRETA A++K+ L +A YL++VI K+ +PFRR+ GGVGR AQAK+ ++ QGRWP KSA F+L LLKNAESNA+ KGLDVD++ + HIQVN+A RRRTYRAHGRINPYMSSPCHIE+ L EKE+ +K A + +K+ Sbjct: 1 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPFRRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARKQ 171
BLAST of 60s ribosomal protein l17 vs. SwissProt
Match: gi|27734446|sp|Q93VI3.1|RL171_ARATH (RecName: Full=60S ribosomal protein L17-1) HSP 1 Score: 219.164 bits (557), Expect = 3.391e-70 Identity = 108/171 (63.16%), Postives = 131/171 (76.61%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTD-QGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQKNAAGTLPDKKK 287 M +Y+ EPDN +KS KA+G++LRVHFKNTRETA AI+K+ LN+A YL++VI K+ +PF RF GVGR AQAK ++ QGRWP KSA+F+L LLKNAESNAE KGLDVD + I HIQVN+A RRRTYRAHGRINPYMS+PCHIE+ L EKE+ +K L K K Sbjct: 1 MVKYSQEPDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQVNQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLAAKSK 171
BLAST of 60s ribosomal protein l17 vs. nr
Match: gi|225718404|gb|ACO15048.1| (60S ribosomal protein L17 [Caligus clemensi]) HSP 1 Score: 305.449 bits (781), Expect = 1.951e-101 Identity = 158/190 (83.16%), Postives = 172/190 (90.53%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTDQGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQKNAAGTLPDKKKVSQKKLKRQKQQMDRTESAI 307 MGRYATEPDNP+KSAKA+GSNLRVHFKNTRE+AQAIKKM+L+RA TYLKNVI QKEI+PFRRF GGVGRHAQAK T QGRWPKKSAEFLLHLLKNAESNAE+KGLDVDH+VIDHIQVNRAP+MRRRTYRAHGRINPYMSSPCHIEV LVEKEQ F K A P+KKKVSQKKLK+QK QM+R+E + Sbjct: 1 MGRYATEPDNPTKSAKARGSNLRVHFKNTRESAQAIKKMSLHRATTYLKNVINQKEIIPFRRFMGGVGRHAQAKVHGTAQGRWPKKSAEFLLHLLKNAESNAEFKGLDVDHLVIDHIQVNRAPHMRRRTYRAHGRINPYMSSPCHIEVVLVEKEQAFSK-VAPEAPEKKKVSQKKLKKQKLQMERSEGVM 189
BLAST of 60s ribosomal protein l17 vs. nr
Match: gi|225711442|gb|ACO11567.1| (60S ribosomal protein L17 [Caligus rogercresseyi]) HSP 1 Score: 303.138 bits (775), Expect = 1.236e-100 Identity = 156/190 (82.11%), Postives = 172/190 (90.53%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTDQGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQKNAAGTLPDKKKVSQKKLKRQKQQMDRTESAI 307 MGRYATEPDNP+KSAKA+GSNLRVHFKNTRETAQAIKKM L+RA TYLKNV+ +KEI+PFRRF GG+GRHAQAK T QGRWPKKSAEFLLHLLKNAESNAE+KGLDVDH+VIDHIQVNRAP+MRRRTYRAHGRINPYMSSPCHIEV L+EKEQ+F K T P+KKKVSQKKLK+QK QMDR+E + Sbjct: 1 MGRYATEPDNPTKSAKARGSNLRVHFKNTRETAQAIKKMPLHRATTYLKNVMNKKEIIPFRRFMGGIGRHAQAKVHGTSQGRWPKKSAEFLLHLLKNAESNAEFKGLDVDHLVIDHIQVNRAPHMRRRTYRAHGRINPYMSSPCHIEVVLLEKEQSFSKVPTET-PEKKKVSQKKLKKQKLQMDRSEGVM 189
BLAST of 60s ribosomal protein l17 vs. nr
Match: gi|225714586|gb|ACO13139.1| (60S ribosomal protein L17 [Lepeophtheirus salmonis]) HSP 1 Score: 301.982 bits (772), Expect = 3.935e-100 Identity = 156/190 (82.11%), Postives = 171/190 (90.00%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTDQGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQKNAAGTLPDKKKVSQKKLKRQKQQMDRTESAI 307 MGRYATEPDNP+KSAK +GSNLRVHFKNTRE+AQAIKKM L+RA TYLKNVI QKEI+PFRRF GG+GRHAQAK T QGRWPKKSAEFLLHLLKNAESNAE+KGLDVDH+VIDHIQVNRAP+MRRRTYRAHGRINPYMSSPCHIEV LVEKEQ F K + T P+KKKVSQKKLK+QK Q+DR+E + Sbjct: 1 MGRYATEPDNPTKSAKVRGSNLRVHFKNTRESAQAIKKMPLHRATTYLKNVINQKEIIPFRRFMGGIGRHAQAKVHGTSQGRWPKKSAEFLLHLLKNAESNAEFKGLDVDHLVIDHIQVNRAPHMRRRTYRAHGRINPYMSSPCHIEVVLVEKEQAFSKVPSDT-PEKKKVSQKKLKKQKLQVDRSEGVM 189
BLAST of 60s ribosomal protein l17 vs. nr
Match: gi|1325283889|ref|XP_023326638.1| (60S ribosomal protein L17-like [Eurytemora affinis]) HSP 1 Score: 283.878 bits (725), Expect = 5.044e-93 Identity = 133/159 (83.65%), Postives = 142/159 (89.31%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTDQGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQK 276 MGRYA EPDN +KSAKA+G+NLRVHFKNTRETAQAIKKM LNRA YLKNVI +KEIVPFRRF GGVGRHAQA T QGRWP KSAEFLLH+LKNAESNAEYKGLD DH+VIDHIQVNRAP MRRRTYRAHGRINPYMSSPCHIE+ LVEKEQT+ + Sbjct: 1 MGRYAIEPDNATKSAKARGTNLRVHFKNTRETAQAIKKMPLNRAKMYLKNVIAKKEIVPFRRFMGGVGRHAQAAVHGTCQGRWPLKSAEFLLHMLKNAESNAEYKGLDADHLVIDHIQVNRAPKMRRRTYRAHGRINPYMSSPCHIELSLVEKEQTYAR 159
BLAST of 60s ribosomal protein l17 vs. nr
Match: gi|961376706|gb|ALS05097.1| (60S ribosomal protein L17 [Centropages tenuiremis]) HSP 1 Score: 283.493 bits (724), Expect = 7.720e-93 Identity = 133/157 (84.71%), Postives = 141/157 (89.81%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTDQGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTF 274 MGRYA EP+N +KSAKA+G+NLRVHFKNTRETAQAIKKM LNRA YLKNVI +KEIVPFRRF GGVGRHAQA T QGRWP KSAEFLLH+LKNAESNAEYKGLD DH+VIDHIQVNRAP MRRRTYRAHGRINPYMSSPCHIE+ LVEKEQTF Sbjct: 1 MGRYAIEPENATKSAKARGTNLRVHFKNTRETAQAIKKMPLNRAKAYLKNVINKKEIVPFRRFMGGVGRHAQAAVHGTCQGRWPLKSAEFLLHMLKNAESNAEYKGLDADHLVIDHIQVNRAPKMRRRTYRAHGRINPYMSSPCHIELSLVEKEQTF 157
BLAST of 60s ribosomal protein l17 vs. nr
Match: gi|961375760|gb|ALS04624.1| (60S ribosomal protein L17 [Pseudodiaptomus poplesia] >gi|961376008|gb|ALS04748.1| 60S ribosomal protein L17 [Pseudodiaptomus poplesia]) HSP 1 Score: 281.952 bits (720), Expect = 3.296e-92 Identity = 130/159 (81.76%), Postives = 142/159 (89.31%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTDQGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQK 276 MGRYA EPDN +KSAKA+GSNLRVHFKNTRETAQAIKKM L+RA YLKNV+ +KEI+PFRRF GGVGRHAQAK T QGRWP KSAEFLLH+LKNAESNAEYKGLD DH+VIDHIQVNRAP MRRRTYRAHGRINPY+SSPCHIE+ L+EKEQ F + Sbjct: 1 MGRYAIEPDNATKSAKARGSNLRVHFKNTRETAQAIKKMPLHRAKKYLKNVMAKKEIIPFRRFMGGVGRHAQAKVHGTAQGRWPYKSAEFLLHMLKNAESNAEYKGLDADHLVIDHIQVNRAPKMRRRTYRAHGRINPYLSSPCHIELTLIEKEQAFSR 159
BLAST of 60s ribosomal protein l17 vs. nr
Match: gi|1325333403|ref|XP_023348546.1| (60S ribosomal protein L17-like [Eurytemora affinis] >gi|1325334315|ref|XP_023348985.1| 60S ribosomal protein L17-like [Eurytemora affinis]) HSP 1 Score: 280.411 bits (716), Expect = 1.274e-91 Identity = 131/159 (82.39%), Postives = 139/159 (87.42%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTDQGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQK 276 MGRYATEPDN +KS KA+G+NLRVHFKNTRETAQAIK M LNRA YLKNVI +KEIVPFRRF GGVGRHAQA T QGRWP KSAEFLLH+LKNAESNAEYKGLD DH+VIDHIQVNRAP MRRRTYRAHGRINPYMSSPCHIE+ L EKEQ F + Sbjct: 1 MGRYATEPDNATKSCKARGTNLRVHFKNTRETAQAIKHMPLNRAKVYLKNVIAKKEIVPFRRFMGGVGRHAQAAVHGTCQGRWPLKSAEFLLHMLKNAESNAEYKGLDADHLVIDHIQVNRAPKMRRRTYRAHGRINPYMSSPCHIELTLAEKEQAFSR 159
BLAST of 60s ribosomal protein l17 vs. nr
Match: gi|961376364|gb|ALS04926.1| (60S ribosomal protein L17 [Pseudodiaptomus poplesia]) HSP 1 Score: 278.485 bits (711), Expect = 6.140e-91 Identity = 129/159 (81.13%), Postives = 141/159 (88.68%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTDQGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQK 276 MGRYA EPDN +KSAKA+GSNLRVHFKNTRETAQAIKKM L+RA YLKNV+ +KEI+PFRRF GGVGRHAQAK T QGRWP KSAEFLLH+LKNAESNAEYKGLD DH+ IDHIQVNRAP MRRRTYRAHGRINPY+SSPCHIE+ L+EKEQ F + Sbjct: 1 MGRYAIEPDNATKSAKARGSNLRVHFKNTRETAQAIKKMPLHRAKKYLKNVMAKKEIIPFRRFMGGVGRHAQAKVHGTAQGRWPYKSAEFLLHMLKNAESNAEYKGLDADHLDIDHIQVNRAPKMRRRTYRAHGRINPYLSSPCHIELTLIEKEQAFSR 159
BLAST of 60s ribosomal protein l17 vs. nr
Match: gi|961375436|gb|ALS04462.1| (60S ribosomal protein L17 [Acartia pacifica] >gi|961375438|gb|ALS04463.1| 60S ribosomal protein L17 [Acartia pacifica]) HSP 1 Score: 277.715 bits (709), Expect = 1.219e-90 Identity = 129/157 (82.17%), Postives = 138/157 (87.90%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTDQGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTF 274 MGRYATEPDN +KSAKA+G+NLRVHFKNTRETA AIKKM LNRA YLKNVI +KEI+PFRRF GGVGRHAQAK T QGRWP KS EFLL +LKNAESNAEYKGLD DH+VIDHIQV RAP MRRRTYRAHGRINPYMSSPCHIE+ L+EKEQ F Sbjct: 1 MGRYATEPDNATKSAKARGTNLRVHFKNTRETANAIKKMPLNRAKIYLKNVIAKKEIIPFRRFMGGVGRHAQAKVHGTAQGRWPLKSCEFLLDMLKNAESNAEYKGLDADHLVIDHIQVQRAPKMRRRTYRAHGRINPYMSSPCHIEMVLIEKEQAF 157
BLAST of 60s ribosomal protein l17 vs. nr
Match: gi|242011044|ref|XP_002426267.1| (60S ribosomal protein L17, putative [Pediculus humanus corporis] >gi|212510330|gb|EEB13529.1| 60S ribosomal protein L17, putative [Pediculus humanus corporis]) HSP 1 Score: 276.174 bits (705), Expect = 5.601e-90 Identity = 142/185 (76.76%), Postives = 154/185 (83.24%), Query Frame = 0 Query: 118 MGRYATEPDNPSKSAKAKGSNLRVHFKNTRETAQAIKKMALNRAVTYLKNVITQKEIVPFRRFRGGVGRHAQAKAFKTDQGRWPKKSAEFLLHLLKNAESNAEYKGLDVDHMVIDHIQVNRAPYMRRRTYRAHGRINPYMSSPCHIEVCLVEKEQTFQKNAAGTLPDKKKVSQKKLKRQKQQMDR 302 MGRYA EPDN +KS KA+GSNLRVHFKNTRETAQAIKKM L RAV YLKNVI KE VPFRRF GGVGR AQAK +KT QGRWPKKSAEFLL LLKNAESNA+Y GLD+D +VIDHIQVNRAP +RRRTYRAHGRINPYMSSPCHIEV L EKE+ K P KKK+S+KKL RQK++M R Sbjct: 1 MGRYAREPDNATKSCKARGSNLRVHFKNTRETAQAIKKMTLRRAVKYLKNVIEHKECVPFRRFNGGVGRCAQAKQWKTTQGRWPKKSAEFLLQLLKNAESNADYSGLDIDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVFLTEKEEVIAK-PTHEEPTKKKISKKKLARQKEKMMR 184 The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l17 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 5
BLAST of 60s ribosomal protein l17 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of 60s ribosomal protein l17 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold505_size153196:74924..81143+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold505_size153196-snap-gene-0.21 ID=maker-scaffold505_size153196-snap-gene-0.21|Name=60s ribosomal protein l17|organism=Tigriopus kingsejongensis|type=gene|length=6220bp|location=Sequence derived from alignment at scaffold505_size153196:74924..81143+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '60s ribosomal protein l17' has the following synonyms
Add to Basket
|