conserved hypothetical protein, maker-scaffold52_size450388-snap-gene-1.15 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000007875 (supercontig:LSalAtl2s:LSalAtl2s462:411001:459523:-1 gene:EMLSAG00000007875 transcript:EMLSAT00000007875 description:"maker-LSalAtl2s462-snap-gene-3.22") HSP 1 Score: 131.339 bits (329), Expect = 2.033e-37 Identity = 75/167 (44.91%), Postives = 99/167 (59.28%), Query Frame = 0 Query: 16 CSVDPQLFQNFKTEDGDQLQAEFRAFKFPESNYVLFKGTVNVCLDWCTAVKCANGEVGYGKRRRRDVSQDERSHLNKIYEVSMATIVKVSEGNVDDDVKPKTTWLEKATLREIYHEDDKAISALSEEFGAYKYIDFH---SASPSSLRASTWGLFAGLAGLLLLAAR 179 C+VDP LF+NF+TE GD L+A F+AFKFP +N VLFK VNVCLD C ++CAN E+GYGK+R+R NK+YEVSM+T+V+VS DD+ E + +I + + S +FGA KY+DF SAS S + + A L LL AR Sbjct: 214 CTVDPYLFENFQTEKGDLLRAGFKAFKFPSTNVVLFKANVNVCLDKCEGIECANDEIGYGKKRKRRNVPLASPRRNKVYEVSMSTLVRVS----DDE--------EITEILDIXEHQGQPVE-FSSDFGAEKYVDFEGYSSASSSPIHLLSASALALLISFLLTLAR 367
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000009200 (supercontig:LSalAtl2s:LSalAtl2s584:566827:573423:-1 gene:EMLSAG00000009200 transcript:EMLSAT00000009200 description:"maker-LSalAtl2s584-augustus-gene-6.16") HSP 1 Score: 62.7734 bits (151), Expect = 3.815e-12 Identity = 38/106 (35.85%), Postives = 56/106 (52.83%), Query Frame = 0 Query: 14 DKCSVDPQLFQNFKTEDGDQ-LQAEFRAFKFPESNYVLFKGTVNVCLDWCTAVKCANGEVGYGKRRRRDVSQDERSHLNKIYEVSMATIVKVSEGNVDDDVKPKTT 118 D C ++ +F + E G + L A F+AF+FP + V F TV C D C + C+ G +GKRR+R +QDE N E S I +EG+ V+P+T+ Sbjct: 1406 DGCPINEIIFPALELEGGTRALYANFKAFRFPSTPIVNFIATVQFCQDLCKPMPCSGGSESFGKRRKRS-TQDE----NNKEERSFFPITDEAEGH---SVQPRTS 1503
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000008211 (supercontig:LSalAtl2s:LSalAtl2s495:387785:453642:1 gene:EMLSAG00000008211 transcript:EMLSAT00000008211 description:"maker-LSalAtl2s495-augustus-gene-4.12") HSP 1 Score: 55.8398 bits (133), Expect = 1.072e-9 Identity = 27/70 (38.57%), Postives = 40/70 (57.14%), Query Frame = 0 Query: 16 CSVDPQLFQNFKTE-DGDQLQAEFRAFKFPESNYVLFKGTVNVCLDWCTAVKCANGEVGYGKRRRRDVSQ 84 C+ DP++FQ +K + + L A F AFKFP+S + FK V +C C C G +G+RR+R+ S Sbjct: 9679 CATDPEIFQEWKLDRNTGYLTALFDAFKFPDSINLKFKCIVRICFGQCQPQNCG-GRNAFGRRRKRESSH 9747
BLAST of conserved hypothetical protein vs. L. salmonis genes
Match: EMLSAG00000009738 (supercontig:LSalAtl2s:LSalAtl2s627:97520:104600:-1 gene:EMLSAG00000009738 transcript:EMLSAT00000009738 description:"maker-LSalAtl2s627-augustus-gene-1.19") HSP 1 Score: 52.7582 bits (125), Expect = 7.632e-9 Identity = 28/69 (40.58%), Postives = 37/69 (53.62%), Query Frame = 0 Query: 16 CSVDPQLFQNFKTEDGD--QLQAEFRAFKFPESNYVLFKGTVNVCLDWCTAVKCANG--EVGYGKRRRR 80 C +D + + K +G LQA+F AFKFP S+ V F+ V C+ C + C G YGKRRRR Sbjct: 329 CPMDVSIMSHVKQVNGSAQTLQADFDAFKFPTSDTVQFRALVTPCIPRCDPIVCNLGYPMYSYGKRRRR 397
BLAST of conserved hypothetical protein vs. nr
Match: gi|820852384|ref|XP_003694760.2| (PREDICTED: uncharacterized protein LOC100870347 isoform X2 [Apis florea]) HSP 1 Score: 120.553 bits (301), Expect = 3.999e-29 Identity = 55/92 (59.78%), Postives = 72/92 (78.26%), Query Frame = 0 Query: 14 DKCSVDPQLFQNFKTEDGDQLQAEFRAFKFPESNYVLFKGTVNVCLDWCTAVKCANGEVGYGKRRRR-DVSQDERSHLNKIYEVSMATIVKV 104 + CSVDP LF+NF T DGD L A+FRAFKFPES YV F+GTVNVCLD C ++C+NG++G+G+RRR DVS E NK++EV+M+ ++KV Sbjct: 229 NGCSVDPYLFENFNTVDGDFLTAKFRAFKFPESTYVQFRGTVNVCLDKCQGIECSNGQIGFGRRRRAIDVSNTEN---NKLFEVTMSALIKV 317
BLAST of conserved hypothetical protein vs. nr
Match: gi|939252739|ref|XP_014246016.1| (uncharacterized protein LOC106664622 [Cimex lectularius]) HSP 1 Score: 120.168 bits (300), Expect = 4.325e-29 Identity = 73/171 (42.69%), Postives = 98/171 (57.31%), Query Frame = 0 Query: 16 CSVDPQLFQNFKTEDGDQLQAEFRAFKFPESNYVLFKGTVNVCLDWCTAVKCANGEVGYGKRRRRDVSQDERSHLNKIYEVSMATIVKV--SEGNVDDDVK-------PKTTWLEKATLREIYHEDDKAISALSEEFG---AYKYIDFHSASPSSLRASTWGLFAGLAGLL 174 CSVDP LF+NF T DGD L A+FRAFKFP+S YV FKGTVNVCLD C ++C+NG+VG+G+RRR S NK++EVS+ + +KV N+ D VK P++ T+R++ H+ + EE Y I+ +ASP AS +F L L Sbjct: 215 CSVDPYLFENFNTVDGDFLTAKFRAFKFPDSTYVQFKGTVNVCLDKCRGIECSNGQVGFGRRRREIPSIPPDP--NKVFEVSITSYIKVDYKGDNILDKVKLDLGSESPQSLENNGTTVRQL-HDQKHQLKLEGEEVREDLIYTLIEERNASPLQ-TASYMMMFLLLCALF 381
BLAST of conserved hypothetical protein vs. nr
Match: gi|954572331|ref|XP_014610407.1| (PREDICTED: uncharacterized protein LOC106790179 [Polistes canadensis]) HSP 1 Score: 120.553 bits (301), Expect = 4.468e-29 Identity = 70/172 (40.70%), Postives = 101/172 (58.72%), Query Frame = 0 Query: 16 CSVDPQLFQNFKTEDGDQLQAEFRAFKFPESNYVLFKGTVNVCLDWCTAVKCANGEVGYGKRRRRDVSQDERSHLNKIYEVSMATIVKVSEGNVDDDV-----------KPKTTWLEKATLRE--------IYHEDDKAISALSEEFGAYKYIDFHSASPSSLR-ASTWGLF 167 CSVDP LF+NF T +GD L A+FRAFKFPES YV F+GTVNVCLD C ++C+NG+VG+G+++R S + + NK++EV+M+T +KV + +DDV K K E+A + E + E+ I+ E YK + + + S A+T+GLF Sbjct: 230 CSVDPYLFENFNTVNGDFLTAKFRAFKFPESTYVQFRGTVNVCLDKCLGIECSNGQVGFGRKKRAIASSN--TDKNKLFEVTMSTFIKV---DFEDDVMIDQVLSEFIRKGKNRTEERAVIAEEEQSAPTTVRIEERPIIAEEVREQFKYKLTEIETNAADSFNVATTFGLF 396
BLAST of conserved hypothetical protein vs. nr
Match: gi|915666764|gb|KOC68628.1| (hypothetical protein WH47_06419 [Habropoda laboriosa]) HSP 1 Score: 119.783 bits (299), Expect = 4.659e-29 Identity = 67/158 (42.41%), Postives = 99/158 (62.66%), Query Frame = 0 Query: 16 CSVDPQLFQNFKTEDGDQLQAEFRAFKFPESNYVLFKGTVNVCLDWCTAVKCANGEVGYGKRRRR-DVSQDERSHLNKIYEVSMATIVKVSEGNVDDDVKPKTTWLEKATLREIY----HEDDKAISALSEEFGAYKYIDFHSASPSSLRASTWGLFA 168 CSVDP LF+NF T DGD L A+FRAFKFPES YV F+GTVNVCLD C ++C+NG++G+G++RR DVS ++ NK++EV+M+ ++KV + ++D ++KA L E+Y KA + ++EE A+P+++R A Sbjct: 197 CSVDPYLFENFNTVDGDFLTAKFRAFKFPESTYVQFRGTVNVCLDKCQGIECSNGQIGFGRKRRAIDVSNTDK---NKLFEVTMSALIKV---DFEED-----AVVDKA-LSELYIRRGKNRTKARAVIAEEVR-------EQAAPTTIRTEERAFIA 335
BLAST of conserved hypothetical protein vs. nr
Match: gi|328786018|ref|XP_001122795.2| (PREDICTED: uncharacterized protein LOC727081 isoform X2 [Apis mellifera]) HSP 1 Score: 120.553 bits (301), Expect = 4.935e-29 Identity = 54/92 (58.70%), Postives = 73/92 (79.35%), Query Frame = 0 Query: 14 DKCSVDPQLFQNFKTEDGDQLQAEFRAFKFPESNYVLFKGTVNVCLDWCTAVKCANGEVGYGKRRRR-DVSQDERSHLNKIYEVSMATIVKV 104 + CSVDP LF+NF T DGD L A+FRAFKFPES YV F+GTVNVCLD C ++C+NG++G+G+RRR DVS ++ NK++EV+M+ ++KV Sbjct: 229 NGCSVDPYLFENFNTVDGDFLTAKFRAFKFPESTYVQFRGTVNVCLDKCQGIECSNGQIGFGRRRRAIDVSSTDK---NKLFEVTMSALIKV 317 The following BLAST results are available for this feature:
BLAST of conserved hypothetical protein vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 4
BLAST of conserved hypothetical protein vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 0
BLAST of conserved hypothetical protein vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold52_size450388:105015..113073+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold52_size450388-snap-gene-1.15 ID=maker-scaffold52_size450388-snap-gene-1.15|Name=conserved hypothetical protein|organism=Tigriopus kingsejongensis|type=gene|length=8059bp|location=Sequence derived from alignment at scaffold52_size450388:105015..113073+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'conserved hypothetical protein' has the following synonyms
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