long-wavelength rhodopsin, maker-scaffold71_size417697-snap-gene-3.16 (gene) Tigriopus kingsejongensis

Overview


Name	long-wavelength rhodopsin
Unique Name	maker-scaffold71_size417697-snap-gene-3.16
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of long-wavelength rhodopsin vs. L. salmonis genes
Match: EMLSAG00000010390 (supercontig:LSalAtl2s:LSalAtl2s68:1171681:1173265:1 gene:EMLSAG00000010390 transcript:EMLSAT00000010390 description:"maker-LSalAtl2s68-augustus-gene-11.5")

HSP 1 Score: 345.51 bits (885), Expect = 1.929e-118
Identity = 157/212 (74.06%), Postives = 183/212 (86.32%), Query Frame = 0

Query:  105 SGLYLDDEYYLRYPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            +GLY+D  YY +YP GMK TDGIP+++ EV+  HW Q++PANPLI HFFGIMFFFLW+++F GNG VI+IF KVKSLRTPTNMFVINLA+SDLIMMT+MGPPVTIN+F+QRYWAWG FGCKLYG  GAVCGVVSIL+MVVIGYDRYNVIVKGFNG KIT+GKAL I+ +IWGYS+ IS   L +IWGG+T EG+LFTCSYDYL  D N+ SY
Sbjct:   15 AGLYMDTTYYNQYPPGMKXTDGIPEELREVIHAHWDQYSPANPLIAHFFGIMFFFLWLMNFFGNGLVIFIFSKVKSLRTPTNMFVINLAISDLIMMTSMGPPVTINIFLQRYWAWGVFGCKLYGCVGAVCGVVSILTMVVIGYDRYNVIVKGFNGTKITAGKALIIIMSIWGYSIAISALALFDIWGGYTVEGLLFTCSYDYLTDDANNVSY 226

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BLAST of long-wavelength rhodopsin vs. L. salmonis genes
Match: EMLSAG00000005061 (supercontig:LSalAtl2s:LSalAtl2s264:303145:304233:1 gene:EMLSAG00000005061 transcript:EMLSAT00000005061 description:"augustus_masked-LSalAtl2s264-processed-gene-3.0")

HSP 1 Score: 337.421 bits (864), Expect = 1.565e-115
Identity = 151/208 (72.60%), Postives = 178/208 (85.58%), Query Frame = 0

Query:  109 LDDEYYLRYPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            +DD YY +YP GMKMTDGIP+++ EV+  HW QF+PANPLI HFFG+MFFFLW+++F+GNG VI+IF KVKSLRTP+NMFVINLALSDL+MMTTMGP VT+NVFMQRYWAWG FGCKLYG  GA+CGVVSIL+MVVIGYDRYNVIVKG NG +I+ GKALAI+  IW YS+ IS   L +IWGG+T EG+LFTCSYDYL  D N+ +Y
Sbjct:    1 MDDVYYNQYPPGMKMTDGIPEELREVIHSHWDQFSPANPLIAHFFGVMFFFLWVMNFVGNGLVIFIFSKVKSLRTPSNMFVINLALSDLLMMTTMGPAVTVNVFMQRYWAWGVFGCKLYGCIGAICGVVSILTMVVIGYDRYNVIVKGLNGFRISVGKALAIILVIWAYSIAISALALFDIWGGYTVEGLLFTCSYDYLTDDANNTTY 208

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BLAST of long-wavelength rhodopsin vs. L. salmonis genes
Match: EMLSAG00000002839 (supercontig:LSalAtl2s:LSalAtl2s163:319470:321170:1 gene:EMLSAG00000002839 transcript:EMLSAT00000002839 description:"maker-LSalAtl2s163-augustus-gene-3.3")

HSP 1 Score: 283.493 bits (724), Expect = 3.383e-94
Identity = 126/213 (59.15%), Postives = 161/213 (75.59%), Query Frame = 0

Query:  104 ISGLYLDDEYYLRYPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            I+GLY+D+ Y+  Y    ++TDG+P+++ EV+  HW QF+P NPL+ HFF + +FFL   S  GN  V+YIF+KVKSLRTP+NMFV+NLALSD  M+ T   PV  N FMQRYWAWG FGCKLYGF GAV GV SIL+MV+IGYDRYNVIVKG NG +IT  +A  +L  IW Y++G+S   L N+WGGF  EG+L TCSYDYL++D+N+ +Y
Sbjct:    8 IAGLYMDETYHKMYSSSSRLTDGVPEELREVIHHHWDQFSPVNPLVTHFFAVFYFFLCSASMFGNLLVMYIFIKVKSLRTPSNMFVVNLALSDFCMILTQAVPVIFNAFMQRYWAWGVFGCKLYGFLGAVFGVESILTMVIIGYDRYNVIVKGMNGTRITPMRAFILLLFIWFYAIGVSALALFNVWGGFMAEGLLLTCSYDYLSEDWNNFTY 220

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BLAST of long-wavelength rhodopsin vs. L. salmonis genes
Match: EMLSAG00000008720 (supercontig:LSalAtl2s:LSalAtl2s541:386677:393024:1 gene:EMLSAG00000008720 transcript:EMLSAT00000008720 description:"maker-LSalAtl2s541-augustus-gene-3.14")

HSP 1 Score: 73.9442 bits (180), Expect = 5.718e-15
Identity = 54/182 (29.67%), Postives = 87/182 (47.80%), Query Frame = 0

Query:  119 KGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWG--AFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLP----PLLNIWGGFT 294
            + M   D +   V+E++D  W   +   P   H    ++  + I   LGN  VIYI  +  S+RT  N++V+NLA+SDL M+  +  P+T+   +   W +G     C+L G   A    VS +++  I  DR  +IV          GK +A +  IWG ++ ++ P      L  W G+T
Sbjct:   21 QNMSKRDVLEIYVLELLD-DWRYQSRVRPPWNHLLIALYAAMIIFGSLGNFMVIYIVARNSSMRTARNVYVVNLAISDL-MLCLITMPLTLVEILYLTWQFGNIEVACRLVGLLQATSVFVSTITITAIALDRRRLIVGSEQESPQDMGKIIATVPLIWGTALVMASPLAIWKTLEKWTGWT 200

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BLAST of long-wavelength rhodopsin vs. L. salmonis genes
Match: EMLSAG00000001649 (supercontig:LSalAtl2s:LSalAtl2s128:1686660:1689308:-1 gene:EMLSAG00000001649 transcript:EMLSAT00000001649 description:"maker-LSalAtl2s128-augustus-gene-16.10")

HSP 1 Score: 65.4698 bits (158), Expect = 3.881e-12
Identity = 40/131 (30.53%), Postives = 70/131 (53.44%), Query Frame = 0

Query:  156 MFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRY-WAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITS-GKALAILFAIWGYSVGISLP 284
            M+  L+I   LGN  V ++ +K KS+ TPTN ++ +L++SDL+++  +G P  + ++ Q+Y W +G   CK   F   +    S+L++V    +RY  I        ++   + L IL  IW  S   ++P
Sbjct:   68 MYLILFISGVLGNLAVCFVIVKNKSMHTPTNYYLFSLSISDLLIL-ILGLPNDLTIYWQQYPWLFGEVLCKGRSFVSEMTSYSSVLTIVAFSSERYLAICHPIYSHTMSGFKRTLRILCIIWTISFLFAIP 197

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BLAST of long-wavelength rhodopsin vs. L. salmonis genes
Match: EMLSAG00000006807 (supercontig:LSalAtl2s:LSalAtl2s382:146876:192943:-1 gene:EMLSAG00000006807 transcript:EMLSAT00000006807 description:"maker-LSalAtl2s382-augustus-gene-2.10")

HSP 1 Score: 64.6994 bits (156), Expect = 7.360e-12
Identity = 39/133 (29.32%), Postives = 70/133 (52.63%), Query Frame = 0

Query:  159 FLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVK--GFNGVKITSGKALAILFAIWGYSVGISLPPLLNI 289
             ++I   +GN  V       KS+++ TN+F++NLA++D+++M    PP  I   +   W +G+  C++  +   +   VS+L++  I YDRY  I +   F+  K    KA   + AIW  S  I +P  +++
Sbjct:   71 LVFICGIIGNALVFIAVTTTKSMQSVTNIFIVNLAMADMLVMIFCVPPTVI-WDVTNTWIFGSLMCRIVLYIQDISVSVSVLTLTFIAYDRYYAICRPLQFSSRK---TKAAVXIAAIWTISAIIGIPNAISL 199

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BLAST of long-wavelength rhodopsin vs. L. salmonis genes
Match: EMLSAG00000007974 (supercontig:LSalAtl2s:LSalAtl2s471:105708:107132:1 gene:EMLSAG00000007974 transcript:EMLSAT00000007974 description:"augustus_masked-LSalAtl2s471-processed-gene-1.0")

HSP 1 Score: 59.3066 bits (142), Expect = 4.444e-10
Identity = 42/137 (30.66%), Postives = 65/137 (47.45%), Query Frame = 0

Query:  154 GIMFFFLWIISFLGNGCVIYIFLKVKSLRTP-TNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKG--FNGVKITSGKALAILFAIWGYSVGISLPPLL 287
            GI+F  + ++S LGN  V    ++   LR    N FVI+LA++D ++         I +    +W +G F C LY     V    SIL+++ I   RY  I+K     G   + G+ L I+  IW  S  I+  P+ 
Sbjct:   48 GIVFLIIILMSLLGNLLVFVSVIRTYKLRQQIANYFVISLAVADFLVAVVAMFFNGITIVFSGHWLFGPFICDLYNAMDVVFCTASILNLLFISLYRYYQIIKEPLSYGETFSKGRVLLIIAFIWAISFVIAFVPIF 184

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BLAST of long-wavelength rhodopsin vs. L. salmonis genes
Match: EMLSAG00000003021 (supercontig:LSalAtl2s:LSalAtl2s171:196627:197691:1 gene:EMLSAG00000003021 transcript:EMLSAT00000003021 description:"augustus_masked-LSalAtl2s171-processed-gene-2.0")

HSP 1 Score: 58.151 bits (139), Expect = 7.001e-10
Identity = 42/137 (30.66%), Postives = 65/137 (47.45%), Query Frame = 0

Query:  151 HFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFA-IWGYSVGISLPPL 286
            + F I+  F  + + LGN  +I   LK +SL T TN F+ +LA++D ++   + P       M + W +G   C ++     +    SIL++ VI  DRY  I          +GK  AIL   +W  S  IS P +
Sbjct:   31 YLFAILISF-GVATVLGNSLIIVSVLKKRSLHTATNYFITSLAIADFLVGLVVMPFSATYEAMDQRWIFGPDWCDIWHSMDVLASTASILNLCVISLDRYWAITDPMTYPYKMTGKRAAILIVLVWVCSSVISFPAI 166

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BLAST of long-wavelength rhodopsin vs. L. salmonis genes
Match: EMLSAG00000012081 (supercontig:LSalAtl2s:LSalAtl2s863:198955:217784:-1 gene:EMLSAG00000012081 transcript:EMLSAT00000012081 description:"maker-LSalAtl2s863-augustus-gene-1.25")

HSP 1 Score: 58.5362 bits (140), Expect = 7.464e-10
Identity = 33/106 (31.13%), Postives = 64/106 (60.38%), Query Frame = 0

Query:  182 RTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKI-TSGKALAILFAIWGYSVGISLPPL 286
            R  TN+F+I+LA++DL+++T   P   ++ F  ++ + G+ GCK+  ++  +  V SIL+++ +  +R+ VIV       + T   +  +L A+WG S+ ++LP L
Sbjct:   92 RNATNLFLISLAVADLLLVTVAAPMELVHYFAPQFGSGGS-GCKIAEYSRVLSAVASILNLLSVTLERFIVIVFPMRSRSLCTMTNSRRVLGAVWGLSLILTLPVL 196

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BLAST of long-wavelength rhodopsin vs. L. salmonis genes
Match: EMLSAG00000010593 (supercontig:LSalAtl2s:LSalAtl2s704:480144:484252:-1 gene:EMLSAG00000010593 transcript:EMLSAT00000010593 description:"snap_masked-LSalAtl2s704-processed-gene-4.5")

HSP 1 Score: 56.225 bits (134), Expect = 2.802e-9
Identity = 37/121 (30.58%), Postives = 61/121 (50.41%), Query Frame = 0

Query:  166 LGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGK-ALAILFAIWGYSVGISLPP 285
            LGN  +I + L  K+LR P N  +++LALSD ++     PP  +    +  W  G F C ++ F   +    SIL++ +I  DRY  IV   + +   + K  L  ++  W  S G+++ P
Sbjct:   48 LGNIAIILMILYRKTLRNPGNYLLLSLALSDCLVALFAMPPALLAYVWEDKWFGGBFFCSVWIFFDVLSCSSSILNLTMICVDRYQCIVYPLHYLPNRTTKFVLKYIYVAWLISFGLAVFP 168

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BLAST of long-wavelength rhodopsin vs. SwissProt
Match: gi|2499378|sp|Q25157.1|OPSC1_HEMSA (RecName: Full=Compound eye opsin BCRH1)

HSP 1 Score: 191.43 bits (485), Expect = 6.668e-57
Identity = 92/201 (45.77%), Postives = 128/201 (63.68%), Query Frame = 0

Query:  117 YPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSYQ 317
            YP+GM + D +PD V  +V  HW  + P NP+  +  G+++ FL +IS  GNG VIY+++K ++L+TP NM ++NLALSDLIM+TT  PP   N F    W +    C++Y   GA+ GV SI ++ +I +DRYN+I  GFNG K+T GKA  +    W  SVG SLPP    WG +T EG+L +CSYDY  +D N  +Y 
Sbjct:   21 YPEGMTVADFVPDRVKHMVLDHWYNYPPVNPMWHYLLGVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTTNFPPFCYNCFSGGRWMFSGTYCEIYAALGAITGVCSIWTLCMISFDRYNIICNGFNGPKLTQGKATFMCGLAWVISVGWSLPPFFG-WGSYTLEGILDSCSYDYFTRDMNTITYN 220

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BLAST of long-wavelength rhodopsin vs. SwissProt
Match: gi|2499379|sp|Q25158.1|OPSC2_HEMSA (RecName: Full=Compound eye opsin BCRH2)

HSP 1 Score: 182.956 bits (463), Expect = 1.265e-53
Identity = 89/201 (44.28%), Postives = 124/201 (61.69%), Query Frame = 0

Query:  117 YPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSYQ 317
            YP+G+ + D +  ++   V  HW  + P NP+  +  G+++ FL  +S  GNG VIY+F K  +LRTP N+ V+NLALSDLIM+TT  P  T N F    W +    C++Y   GA+ GV SI  + +I +DRYN+I  GFNG K+T+GKA+      W  ++G +LPP    WG +  EG+L +CSYDYL QDFN  SY 
Sbjct:   21 YPEGVSIVDFVRPEIKPYVHQHWYNYPPVNPMWHYLLGVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALSDLIMLTTNVPFFTYNCFSGGVWMFSPQYCEIYACLGAITGVCSIWLLCMISFDRYNIICNGFNGPKLTTGKAVVFALISWVIAIGCALPPFFG-WGNYILEGILDSCSYDYLTQDFNTFSYN 220

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BLAST of long-wavelength rhodopsin vs. SwissProt
Match: gi|74956512|sp|O02464.2|OPS1_MANSE (RecName: Full=Opsin-1; Short=MANOP1; AltName: Full=Rhodopsin 1, long-wavelength; AltName: Full=Rhodopsin P520)

HSP 1 Score: 170.244 bits (430), Expect = 8.004e-49
Identity = 82/194 (42.27%), Postives = 115/194 (59.28%), Query Frame = 0

Query:  123 MTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            + D +P D+M ++DPHW QF P NPL     G     L  +S  GNG VIYIF+  KSL+TP+N+ V+NLA SD +MM  M P + +N + +  W WG F C+LY   G++ G  SI +M +I +DRYNVIVKG     +TS  AL  +  IW +S+  +L P    W  +  EG +  C  DYL++ +  +SY
Sbjct:   27 VVDKVPPDMMHMIDPHWYQFPPMNPLWHALLGFTIGVLGFVSISGNGMVIYIFMSTKSLKTPSNLLVVNLAFSDFLMMCAMSPAMVVNCYYET-WVWGPFACELYACAGSLFGCASIWTMTMIAFDRYNVIVKGIAAKPMTSNGALLRILGIWVFSLAWTLLPFFG-WNRYVPEGNMTACGTDYLSKSWVSRSY 218

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BLAST of long-wavelength rhodopsin vs. SwissProt
Match: gi|2499368|sp|Q17296.1|OPSD_CATBO (RecName: Full=Rhodopsin)

HSP 1 Score: 166.007 bits (419), Expect = 3.695e-47
Identity = 84/194 (43.30%), Postives = 119/194 (61.34%), Query Frame = 0

Query:  123 MTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            + D +P +++ +VD HW QF P NPL     G +   L +IS +GNG VIYIF   KSLRTP+N+ VINLA+SD +MM +M P + IN + +  W  G   C+LYG TG++ G  SI +M +I +DRYNVIVKG +   +T   AL  +  IW +S+G ++ P+   W  +  EG +  C  DYL +D   +SY
Sbjct:   27 VVDKVPPEMLHLVDAHWYQFPPMNPLWHAILGFVIGILGMISVIGNGMVIYIFTTTKSLRTPSNLLVINLAISDFLMMLSMSPAMVINCYYET-WVLGPLVCELYGLTGSLFGCGSIWTMTMIAFDRYNVIVKGLSAKPMTINGALLRILGIWFFSLGWTIAPMFG-WNRYVPEGNMTACGTDYLTKDLLSRSY 218

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BLAST of long-wavelength rhodopsin vs. SwissProt
Match: gi|3024267|sp|Q94741.1|OPS1_SCHGR (RecName: Full=Opsin-1)

HSP 1 Score: 164.466 bits (415), Expect = 1.578e-46
Identity = 84/194 (43.30%), Postives = 118/194 (60.82%), Query Frame = 0

Query:  123 MTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            + D +P +++ +VDPHW QF P NPL     G +   L +IS +GNG VIYIF   KSLRTP+N+ V+NLA SD +MM TM  P+ IN + +  W  G F C+LY   G++ G  SI +M +I  DRYNVIVKG +   +T+  A+  +  IW +SV  ++ PL   W  +  EG +  C  DYL +D+  +SY
Sbjct:   27 VVDKVPPEMLYLVDPHWYQFPPMNPLWHGLLGFVIGVLGVISVIGNGMVIYIFSTTKSLRTPSNLLVVNLAFSDFLMMFTMSAPMGINCYYET-WVLGPFMCELYALFGSLFGCGSIWTMTMIALDRYNVIVKGLSAKPMTNKTAMLRILFIWAFSVAWTIMPLFG-WNRYVPEGNMTACGTDYLTKDWVSRSY 218

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BLAST of long-wavelength rhodopsin vs. SwissProt
Match: gi|2499367|sp|Q17292.1|OPSD_CAMAT (RecName: Full=Rhodopsin)

HSP 1 Score: 162.54 bits (410), Expect = 7.575e-46
Identity = 80/194 (41.24%), Postives = 116/194 (59.79%), Query Frame = 0

Query:  123 MTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            + D +P +++ +VD HW QF P NPL     G +   L +IS +GNG VIYIF   KSLRTP+N+ V+NLA+SD +MM  M P + IN + +  W  G   C+LYG  G++ G  SI +M +I +DRYNVIVKG +   +T   AL  +  IW +++  ++ P+   W  +  EG +  C  DYL +D   +SY
Sbjct:   27 VVDKVPPEMLHMVDAHWYQFPPMNPLWHALLGFVIGVLGVISVIGNGMVIYIFTTTKSLRTPSNLLVVNLAISDFLMMLCMSPAMVINCYYET-WVLGPLFCELYGLAGSLFGCASIWTMTMIAFDRYNVIVKGLSAKPMTINGALIRILTIWFFTLAWTIAPMFG-WNRYVPEGNMTACGTDYLTKDLFSRSY 218

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BLAST of long-wavelength rhodopsin vs. SwissProt
Match: gi|548428|sp|P35360.1|OPSL_LIMPO (RecName: Full=Lateral eye opsin)

HSP 1 Score: 159.844 bits (403), Expect = 9.496e-45
Identity = 83/200 (41.50%), Postives = 115/200 (57.50%), Query Frame = 0

Query:  117 YPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            Y     + D +P +++ ++  HW  F P NPL     G+    L II  LGNG VIY+ +  KSLRTPTN+ V+NLA SD  MM  M P +T N F +  W  G F C++YG  G++ G  SI SMV+I  DRYNVIV+G     +T  KA  +L  +W +S G ++ P    W  +  EG L +C+ DYL +D++  SY
Sbjct:   14 YQPNASVVDTMPKEMLYMIHEHWYAFPPMNPLWYSILGVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAFMMPTMTSNCFAET-WILGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNVIVRGMAAAPLTHKKATLLLLFVWIWSGGWTILPFFG-WSRYVPEGNLTSCTVDYLTKDWSSASY 211

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BLAST of long-wavelength rhodopsin vs. SwissProt
Match: gi|548433|sp|P35362.1|OPSD_SPHSP (RecName: Full=Rhodopsin; Short=Opsin)

HSP 1 Score: 159.458 bits (402), Expect = 1.022e-44
Identity = 80/194 (41.24%), Postives = 116/194 (59.79%), Query Frame = 0

Query:  123 MTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            + D +  +++ ++DPHW QF P NPL     G +   L  +S +GNG VIYIF   K LRTP+N+ V+NLA SD +MM +M PP+ IN + +  W  G F C+LY   G++ G  SI +MV+I  DRYNVIVKG     +T+  A+  +  IW  S+  ++ PL   W  +  EG +  C  DYLN+++  +SY
Sbjct:   25 VVDKVLPEMLHLIDPHWYQFPPMNPLWHGLLGFVIGCLGFVSVVGNGMVIYIFSTTKGLRTPSNLLVVNLAFSDFLMMLSMSPPMVINCYYET-WVLGPFMCELYALLGSLFGCGSIWTMVMIALDRYNVIVKGLAAKPMTNKTAMLRILGIWAMSIAWTVFPLFG-WNRYVPEGNMTACGTDYLNKEWVSRSY 216

[Close]

BLAST of long-wavelength rhodopsin vs. SwissProt
Match: gi|75020335|sp|Q95YI3.1|OPSCE_BOMMO (RecName: Full=Ceropsin; AltName: Full=Cerebral opsin; Short=Boceropsin)

HSP 1 Score: 159.458 bits (402), Expect = 1.532e-44
Identity = 77/194 (39.69%), Postives = 115/194 (59.28%), Query Frame = 0

Query:  123 MTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            + D +  +++ ++D +W QF P NPL     G     L  IS +GNG VIYIF+  K+L+TP+N+ V+NLA SD +MM  M P + IN + +  W +G F C+LYG  G++ G  SI +M +I +DRYNVIVKG     +T+  AL  +  IW +S+  ++ P    W  +  EG +  C  DYL +D+  +SY
Sbjct:   31 VVDRVSPEMLHLIDAYWYQFPPMNPLWHALLGFTIGVLGFISMMGNGMVIYIFMTTKNLKTPSNLLVVNLAFSDFLMMCAMSPAMVINCYNET-WVFGPFACELYGCAGSLFGCASIWTMTMIAFDRYNVIVKGIAAKPMTNNGALLRILGIWAFSLAWTVAPFFG-WNRYVPEGNMTACGTDYLTKDWFSRSY 222

[Close]

BLAST of long-wavelength rhodopsin vs. SwissProt
Match: gi|548429|sp|P35361.1|OPSO_LIMPO (RecName: Full=Ocellar opsin)

HSP 1 Score: 158.303 bits (399), Expect = 3.618e-44
Identity = 82/200 (41.00%), Postives = 114/200 (57.00%), Query Frame = 0

Query:  117 YPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            Y     + D +P +++ ++  HW  F P NPL     G+    L II  LGNG VIY+ +  KSLRTPTN+ V+NLA SD  MM  M P +  N F +  W  G F C++YG  G++ G  SI SMV+I  DRYNVIV+G     +T  KA  +L  +W +S G ++ P    W  +  EG L +C+ DYL +D++  SY
Sbjct:   14 YQPNASVVDTMPKEMLYMIHEHWYAFPPMNPLWYSILGVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAFMMPTMASNCFAET-WILGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNVIVRGMAAAPLTHKKATLLLLFVWIWSGGWTILPFFG-WSRYVPEGNLTSCTVDYLTKDWSSASY 211

[Close]

BLAST of long-wavelength rhodopsin vs. nr
Match: gi|325911019|gb|ADZ45237.1| (opsin, partial [Tigriopus californicus])

HSP 1 Score: 402.905 bits (1034), Expect = 2.549e-137
Identity = 187/203 (92.12%), Postives = 197/203 (97.04%), Query Frame = 0

Query:  114 YLRYPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            YL YPKGMKMTDGIP DVM+V+DPHWSQFAPANPLIPHFFGIMFFFLWI+SF+GN CVI+IFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGF GAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAIL AIWGYS+GISLPPLL++WGG++TEGMLFTCSYDYLNQD NHKSY
Sbjct:    1 YLHYPKGMKMTDGIPADVMQVIDPHWSQFAPANPLIPHFFGIMFFFLWIVSFMGNSCVIFIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFLGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILLAIWGYSIGISLPPLLDVWGGYSTEGMLFTCSYDYLNQDCNHKSY 203

[Close]

BLAST of long-wavelength rhodopsin vs. nr
Match: gi|1325319338|ref|XP_023341453.1| (compound eye opsin BCRH2-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 293.508 bits (750), Expect = 3.921e-94
Identity = 134/216 (62.04%), Postives = 166/216 (76.85%), Query Frame = 0

Query:  101 MGTISGLYLDDEYYLRYPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            MG    +Y+D  + L YPKG      IP++VM V+  HW+QF P++PLIPH FGI+FFFLWII+F+GNG VI+IFLK KSLRTPTN FV+NLA SD +MM+TMG PVT+N F+QRYW WG FGC++Y   GA+CG  SIL+MVVIGYDRYNVIVKGF+GVKI + KAL IL  IWGYS  +S+ P    WGG+  EG+L TC YDYL+Q++N +SY
Sbjct:    1 MGRGGEIYMDTSFNLVYPKGTNQLFDIPEEVMPVISKHWAQFPPSHPLIPHVFGILFFFLWIINFVGNGLVIFIFLKTKSLRTPTNFFVVNLAFSDFVMMSTMGLPVTVNAFVQRYWMWGVFGCQVYAMIGAICGTTSILTMVVIGYDRYNVIVKGFSGVKINAPKALLILICIWGYSTVVSMMPFFG-WGGYMAEGLLVTCGYDYLSQEWNRRSY 215

[Close]

BLAST of long-wavelength rhodopsin vs. nr
Match: gi|1325305428|ref|XP_023334325.1| (compound eye opsin BCRH2-like isoform X3 [Eurytemora affinis])

HSP 1 Score: 290.812 bits (743), Expect = 3.464e-93
Identity = 131/212 (61.79%), Postives = 158/212 (74.53%), Query Frame = 0

Query:  105 SGLYLDDEYYLRYPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
             G+YLD  Y L YP+G    DGIP D+ E+  PHW  F P +P++ H  G  +  LW+ISF GNGCV+YIFLK KSLRTPTNMF++NLA+SDL MMTT GPPVTIN F+QRYW +G  GCK+Y  TG + G +SILSMVVIGYDRYNVI KGFNGVKIT+GKA  ++  +W YS  + LPP    WGG+ TEG L TCSYDYL QD+NHK++
Sbjct:    7 EGVYLDSNYGLVYPEGATHYDGIPKDLNEIFHPHWGTFPPQHPMVNHVVGFAYIILWLISFFGNGCVVYIFLKTKSLRTPTNMFIVNLAVSDLCMMTTQGPPVTINAFIQRYWMFGVTGCKVYALTGGIFGTISILSMVVIGYDRYNVICKGFNGVKITAGKAFGLILFMWLYSTAVCLPPFFG-WGGYATEGTLITCSYDYLTQDWNHKTF 217

[Close]

BLAST of long-wavelength rhodopsin vs. nr
Match: gi|1325305424|ref|XP_023334323.1| (compound eye opsin BCRH2-like isoform X1 [Eurytemora affinis])

HSP 1 Score: 290.812 bits (743), Expect = 4.066e-93
Identity = 131/212 (61.79%), Postives = 158/212 (74.53%), Query Frame = 0

Query:  105 SGLYLDDEYYLRYPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
             G+YLD  Y L YP+G    DGIP D+ E+  PHW  F P +P++ H  G  +  LW+ISF GNGCV+YIFLK KSLRTPTNMF++NLA+SDL MMTT GPPVTIN F+QRYW +G  GCK+Y  TG + G +SILSMVVIGYDRYNVI KGFNGVKIT+GKA  ++  +W YS  + LPP    WGG+ TEG L TCSYDYL QD+NHK++
Sbjct:    7 EGVYLDSNYGLVYPEGATHYDGIPKDLNEIFHPHWGTFPPQHPMVNHVVGFAYIILWLISFFGNGCVVYIFLKTKSLRTPTNMFIVNLAVSDLCMMTTQGPPVTINAFIQRYWMFGVTGCKVYALTGGIFGTISILSMVVIGYDRYNVICKGFNGVKITAGKAFGLILFMWLYSTAVCLPPFFG-WGGYATEGTLITCSYDYLTQDWNHKTF 217

[Close]

BLAST of long-wavelength rhodopsin vs. nr
Match: gi|1325319340|ref|XP_023341454.1| (compound eye opsin BCRH2-like isoform X2 [Eurytemora affinis])

HSP 1 Score: 289.271 bits (739), Expect = 1.427e-92
Identity = 131/208 (62.98%), Postives = 162/208 (77.88%), Query Frame = 0

Query:  109 LDDEYYLRYPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            +D  + L YPKG      IP++VM V+  HW+QF P++PLIPH FGI+FFFLWII+F+GNG VI+IFLK KSLRTPTN FV+NLA SD +MM+TMG PVT+N F+QRYW WG FGC++Y   GA+CG  SIL+MVVIGYDRYNVIVKGF+GVKI + KAL IL  IWGYS  +S+ P    WGG+  EG+L TC YDYL+Q++N +SY
Sbjct:    1 MDTSFNLVYPKGTNQLFDIPEEVMPVISKHWAQFPPSHPLIPHVFGILFFFLWIINFVGNGLVIFIFLKTKSLRTPTNFFVVNLAFSDFVMMSTMGLPVTVNAFVQRYWMWGVFGCQVYAMIGAICGTTSILTMVVIGYDRYNVIVKGFSGVKINAPKALLILICIWGYSTVVSMMPFFG-WGGYMAEGLLVTCGYDYLSQEWNRRSY 207

[Close]

BLAST of long-wavelength rhodopsin vs. nr
Match: gi|1325305426|ref|XP_023334324.1| (compound eye opsin BCRH2-like isoform X2 [Eurytemora affinis])

HSP 1 Score: 282.722 bits (722), Expect = 5.447e-90
Identity = 127/212 (59.91%), Postives = 156/212 (73.58%), Query Frame = 0

Query:  105 SGLYLDDEYYLRYPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
             G+YLD  Y L YP+G    DGIPDD+ E+  PHW  F P +P++ H  G  +  LW+ISF GNGCV+YIFLK KSLRTPTNMF++NLA+SDL MMTT G PV+ N F+QRYW +G  GC++Y   G + G +SILSMVVIGYDRYNVI KGFNGVKIT+GKA  ++  +W YS  + +PP    WGG+ TEG L TCSYDYL QD+NHKS+
Sbjct:    7 EGVYLDSNYGLIYPEGATHYDGIPDDLKEIFHPHWGTFPPQHPMVNHVVGFAYIILWLISFFGNGCVVYIFLKTKSLRTPTNMFIVNLAVSDLCMMTTQGLPVSFNAFVQRYWMFGVTGCQVYAMLGGIFGTISILSMVVIGYDRYNVICKGFNGVKITAGKAFGLILFLWLYSTAVCVPPFFG-WGGYATEGTLITCSYDYLTQDWNHKSF 217

[Close]

BLAST of long-wavelength rhodopsin vs. nr
Match: gi|1325319342|ref|XP_023341455.1| (compound eye opsin BCRH2-like isoform X3 [Eurytemora affinis])

HSP 1 Score: 270.011 bits (689), Expect = 2.136e-85
Identity = 122/185 (65.95%), Postives = 149/185 (80.54%), Query Frame = 0

Query:  132 MEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            M V+  HW+QF P++PLIPH FGI+FFFLWII+F+GNG VI+IFLK KSLRTPTN FV+NLA SD +MM+TMG PVT+N F+QRYW WG FGC++Y   GA+CG  SIL+MVVIGYDRYNVIVKGF+GVKI + KAL IL  IWGYS  +S+ P    WGG+  EG+L TC YDYL+Q++N +SY
Sbjct:    1 MPVISKHWAQFPPSHPLIPHVFGILFFFLWIINFVGNGLVIFIFLKTKSLRTPTNFFVVNLAFSDFVMMSTMGLPVTVNAFVQRYWMWGVFGCQVYAMIGAICGTTSILTMVVIGYDRYNVIVKGFSGVKINAPKALLILICIWGYSTVVSMMPFFG-WGGYMAEGLLVTCGYDYLSQEWNRRSY 184

[Close]

BLAST of long-wavelength rhodopsin vs. nr
Match: gi|1325293712|ref|XP_023330327.1| (compound eye opsin BCRH1-like [Eurytemora affinis])

HSP 1 Score: 268.855 bits (686), Expect = 2.090e-81
Identity = 123/210 (58.57%), Postives = 157/210 (74.76%), Query Frame = 0

Query:  107 LYLDDEYYLRYPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            LY+D  Y L Y +G    DG P+++ E+  PHW +F P +PL  H  GI + FLW +SF+GNG VIYIFLK KSLRTPTNMFV+NLA+SDL MMT+MG PV  N F++RYWAWG  GCK+YG  GA+ G  SI++MVVIGYDRYNVIVKGF+GVKI++GKA AI+  +W Y + +  PP +  WGG+  EG+L TCSYDYL +++N KS+
Sbjct:    9 LYMDPFYGLHYKEGASHLDGTPEELREIFHPHWGKFPPQHPLFGHMAGIAYVFLWFMSFIGNGLVIYIFLKTKSLRTPTNMFVVNLAISDLCMMTSMGVPVIFNQFVERYWAWGILGCKIYGCLGAIFGTCSIMTMVVIGYDRYNVIVKGFSGVKISAGKAAAIITLLWTYCIVVCCPPFIG-WGGYAAEGLLLTCSYDYLTENWNIKSF 217

HSP 2 Score: 232.646 bits (592), Expect = 1.287e-67
Identity = 112/197 (56.85%), Postives = 135/197 (68.53%), Query Frame = 0

Query:  120 GMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            G    DGIP+D+ME+ DPHW +F P                     LGNG VIYIFLK  SLRTPTNMFV+NLA+SDL MMTT G PV IN+F++RYW +G   CK+Y   GA+ G  SIL+MVVIGYDRYNVIVKGF+GV+IT  KA  I+  +W Y V +S PP +  WGG+  EG+L TCSYDYL QD+NHKS+
Sbjct:  322 GASHFDGIPEDLMEIFDPHWGKFPPQ--------------------LGNGLVIYIFLKTASLRTPTNMFVVNLAVSDLCMMTTQGLPVGINMFIERYWIYGVLACKVYACLGAIFGTCSILTMVVIGYDRYNVIVKGFSGVRITGAKAAGIILFMWAYCVAVSAPPFIG-WGGYAAEGLLLTCSYDYLKQDWNHKSF 497

[Close]

BLAST of long-wavelength rhodopsin vs. nr
Match: gi|211922683|dbj|BAG80986.1| (opsin [Branchinella kugenumaensis])

HSP 1 Score: 233.417 bits (594), Expect = 1.370e-70
Identity = 102/197 (51.78%), Postives = 135/197 (68.53%), Query Frame = 0

Query:  117 YPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIPHFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNH 313
            YP G K  DG P DV+ +   HW QF P+NP   + FG+++FFLWI++ +GNG VI+IFLK KSLRTP+NM ++NLA++D  MM T  P   I+ F  R+W WG F C+ YG+TG + G+ +I +MV IGYDRYNVIVKG NG KIT G A  ++   W Y+    LP +L +WG F+ EG+L TCS+DYLN +  H
Sbjct:   20 YPAGTKQIDGAPADVIAMTHAHWKQFPPSNPAWNYLFGVIYFFLWIVNHIGNGLVIWIFLKTKSLRTPSNMLIVNLAIADFFMMLTQSPLYIISAFTSRWWIWGHFWCRFYGYTGGITGIAAIFTMVFIGYDRYNVIVKGMNGTKITKGMAFIMILWTWIYANAFCLPAMLEVWGNFSPEGLLSTCSFDYLNDNKFH 216

[Close]

BLAST of long-wavelength rhodopsin vs. nr
Match: gi|1325305408|ref|XP_023334314.1| (compound eye opsin BCRH2-like [Eurytemora affinis])

HSP 1 Score: 231.491 bits (589), Expect = 1.681e-70
Identity = 105/166 (63.25%), Postives = 125/166 (75.30%), Query Frame = 0

Query:  151 HFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMMTTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRYNVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLFTCSYDYLNQDFNHKSY 316
            H  G+ +  LW I   GNGCVIYIF+K KSLRTPTNMF++NLA+SDL MMTT GPPVT N F+QRYW +G  GCK+Y  TG V G +SILSMVVIGYDRYNVI KGF+GVKIT  KA+ I+  +W YS  + +PP    WGG+  EG L TCSYDYL QD+NH+S+
Sbjct:    9 HVVGLAYIVLWTICLFGNGCVIYIFMKTKSLRTPTNMFIVNLAVSDLCMMTTQGPPVTFNAFVQRYWMFGEIGCKVYALTGGVFGTISILSMVVIGYDRYNVICKGFSGVKITPTKAVGIILCLWLYSTAVCVPPFFG-WGGYAAEGTLITCSYDYLTQDWNHRSF 173

The following BLAST results are available for this feature:

BLAST of long-wavelength rhodopsin vs. L. salmonis genes
BLAST of long-wavelength rhodopsin vs. SwissProt
BLAST of long-wavelength rhodopsin vs. nr

BLAST of long-wavelength rhodopsin vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 21


Match Name	E-value	Identity	Description
EMLSAG00000010390	1.929e-118	74.06	supercontig:LSalAtl2s:LSalAtl2s68:1171681:1173265:...	[more]
EMLSAG00000005061	1.565e-115	72.60	supercontig:LSalAtl2s:LSalAtl2s264:303145:304233:1...	[more]
EMLSAG00000002839	3.383e-94	59.15	supercontig:LSalAtl2s:LSalAtl2s163:319470:321170:1...	[more]
EMLSAG00000008720	5.718e-15	29.67	supercontig:LSalAtl2s:LSalAtl2s541:386677:393024:1...	[more]
EMLSAG00000001649	3.881e-12	30.53	supercontig:LSalAtl2s:LSalAtl2s128:1686660:1689308...	[more]
EMLSAG00000006807	7.360e-12	29.32	supercontig:LSalAtl2s:LSalAtl2s382:146876:192943:-...	[more]
EMLSAG00000007974	4.444e-10	30.66	supercontig:LSalAtl2s:LSalAtl2s471:105708:107132:1...	[more]
EMLSAG00000003021	7.001e-10	30.66	supercontig:LSalAtl2s:LSalAtl2s171:196627:197691:1...	[more]
EMLSAG00000012081	7.464e-10	31.13	supercontig:LSalAtl2s:LSalAtl2s863:198955:217784:-...	[more]
EMLSAG00000010593	2.802e-9	30.58	supercontig:LSalAtl2s:LSalAtl2s704:480144:484252:-...	[more]

Pages

BLAST of long-wavelength rhodopsin vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|2499378\|sp\|Q25157.1\|OPSC1_HEMSA	6.668e-57	45.77	RecName: Full=Compound eye opsin BCRH1	[more]
gi\|2499379\|sp\|Q25158.1\|OPSC2_HEMSA	1.265e-53	44.28	RecName: Full=Compound eye opsin BCRH2	[more]
gi\|74956512\|sp\|O02464.2\|OPS1_MANSE	8.004e-49	42.27	RecName: Full=Opsin-1; Short=MANOP1; AltName: Full...	[more]
gi\|2499368\|sp\|Q17296.1\|OPSD_CATBO	3.695e-47	43.30	RecName: Full=Rhodopsin	[more]
gi\|3024267\|sp\|Q94741.1\|OPS1_SCHGR	1.578e-46	43.30	RecName: Full=Opsin-1	[more]
gi\|2499367\|sp\|Q17292.1\|OPSD_CAMAT	7.575e-46	41.24	RecName: Full=Rhodopsin	[more]
gi\|548428\|sp\|P35360.1\|OPSL_LIMPO	9.496e-45	41.50	RecName: Full=Lateral eye opsin	[more]
gi\|548433\|sp\|P35362.1\|OPSD_SPHSP	1.022e-44	41.24	RecName: Full=Rhodopsin; Short=Opsin	[more]
gi\|75020335\|sp\|Q95YI3.1\|OPSCE_BOMMO	1.532e-44	39.69	RecName: Full=Ceropsin; AltName: Full=Cerebral ops...	[more]
gi\|548429\|sp\|P35361.1\|OPSO_LIMPO	3.618e-44	41.00	RecName: Full=Ocellar opsin	[more]

Pages

BLAST of long-wavelength rhodopsin vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|325911019\|gb\|ADZ45237.1\|	2.549e-137	92.12	opsin, partial [Tigriopus californicus]	[more]
gi\|1325319338\|ref\|XP_023341453.1\|	3.921e-94	62.04	compound eye opsin BCRH2-like isoform X1 [Eurytemo...	[more]
gi\|1325305428\|ref\|XP_023334325.1\|	3.464e-93	61.79	compound eye opsin BCRH2-like isoform X3 [Eurytemo...	[more]
gi\|1325305424\|ref\|XP_023334323.1\|	4.066e-93	61.79	compound eye opsin BCRH2-like isoform X1 [Eurytemo...	[more]
gi\|1325319340\|ref\|XP_023341454.1\|	1.427e-92	62.98	compound eye opsin BCRH2-like isoform X2 [Eurytemo...	[more]
gi\|1325305426\|ref\|XP_023334324.1\|	5.447e-90	59.91	compound eye opsin BCRH2-like isoform X2 [Eurytemo...	[more]
gi\|1325319342\|ref\|XP_023341455.1\|	2.136e-85	65.95	compound eye opsin BCRH2-like isoform X3 [Eurytemo...	[more]
gi\|1325293712\|ref\|XP_023330327.1\|	2.090e-81	58.57	compound eye opsin BCRH1-like [Eurytemora affinis]	[more]
gi\|211922683\|dbj\|BAG80986.1\|	1.370e-70	51.78	opsin [Branchinella kugenumaensis]	[more]
gi\|1325305408\|ref\|XP_023334314.1\|	1.681e-70	63.25	compound eye opsin BCRH2-like [Eurytemora affinis]	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold71_size417697	supercontig	scaffold71_size417697:309863..314706 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:phototransduction

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
maker-scaffold71_size417697-snap-gene-3.16-mRNA-1	maker-scaffold71_size417697-snap-gene-3.16-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold71_size417697:309863..314706-

gene from alignment at scaffold71_size417697:309863..314706-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>maker-scaffold71_size417697-snap-gene-3.16 ID=maker-scaffold71_size417697-snap-gene-3.16|Name=long-wavelength rhodopsin|organism=Tigriopus kingsejongensis|type=gene|length=4844bp|location=Sequence derived from alignment at scaffold71_size417697:309863..314706- (Tigriopus kingsejongensis)
ATGAACTTGGAAGAAATGAGATATCAGGGCATGGGGGCATACCTCGTGCC
GAAGCTCCTTTTGCCTTTGATGTCAGCGAAATTGTCTTTGATGGTGACGC
CATCGAAGCTGGGTCCAAAGTCCAAGTCGAATGAGGGCACACTCAGCCTG
GCCTGGATCAGCTGTTCCACCGGCACGTTCCTCAAGCAGGCCACGATTTC
CTCGTGGTCGTGAGTGAGATCGCTGGGGATGGAACAGTTGAATTTCTTGC
CCAACTGAACCGCATAATTGAGGGGATCCTTCACGCGGGACCACGAGGCA
AACAGGGATCCAGACATCAGGATGACCCGGTGGAAGAGCCCTGGAAGTGC
AAGAAAGTTCGGGGAACAAAGGCGGGGAAGGATGCATTCATGTCTTAATA
TCCCTCCTCGGAGCAGGATCCATCCTCGGCCCAGGGAATGGGGTTCCACC
CGTGCTTGGACACGGGGCAATTTTTGAAGAGCCATAAACTTTTATTATAA
TTCAATTCAACAAAGAGCGGATTTTTTAGGGCCCCTTTGTTCGAGACCAT
CGTCTTAAAACCCGAGATTAGGACCAGGAAAAGGGAATAGGGCGAGATAT
GATATTTGGCGGTCCGGCCCTACTTTTTGTCAGCTCCGGTTGACTACCAT
TAAAACTTTATGTTGATAGTGTTCCAGTAATATATAGGCCTTGGCCGTCC
AGTTCGATCCAGAGCTGTGTATACCATTTTTGAGTCCCGTCAAATCCCGC
TTTGACCTCTTCGAGAGGATTATCAATCGCGTACCTCTAGACGCCTTGCG
CTGGAAAGCCTGATCAATACTACTTTGGAAGGCTTTTACGAAGAGCAACG
TGGATTTTGAGTATAATAACCAAAACACAATTTTCCTCATTTAAATAGGA
AGTTGCACCTTTCACTTTCTTTAATCCTAATTTTGTTTAGCTTGTTGGAA
GCCCACAAAGGTGTTTAAAATAACCGAAAAAATGAGACCACCCAGGGCAT
GGAGATGATAACCCATTGCCTGTGCCGAGGAACACATTCTAACTTTTGAT
GTTCCCTAGATGCAAACAAAGCAAGCTATTGGACTATTTTTAGGGACCGT
GAACGTCAATCGATCAATTTTACTCGTTAGATTCCCACCATTCGTGGCCA
GGGGTTTCAACAACTTCAAGACGTACTTATGCATTGTATCCTCTCATAGC
TGGGGTGGCAGTTTTTGCGTAAATTAGCCTTGCGCTAATTTTGAACGCTG
GACACATTGATCTTGGACGGTATGGCCTCTTGGTTATAGCTTCTGAGCAA
ATGGAAAAGGGTAGGTGGATTAGCTGATATCTCCTTTGCAAATAGGTCAT
CTTTGGTCACTGGTCACCCCATTGAAGGTCATATCAGTATATAAACCGCC
TTTGTTTACATCCTCCCACACTAAAAGCTTGGAAGGTTGCGCGTGCGATG
TAAAAACTTTCCGATAAACCTGTCCTGATTGAAAAGCCTTTTGGATTGGA
ATAAGATAGCTCTGGTTATTTCATTCAAAGTCCATGCATATCTTCAACCA
TAAAACGTTCAAACTCTTGACAGCTATCCAGTACAGAGAGTCTCGAGGTA
CAAGATTCAATGAGTGGCTCCCAAAAGGGGGCCATATTCAAGCCCCTATT
GTCTGCTACTCCCTCTTGGGCGGTGTCTTGCCAAGGTGGTGGGCCATTTG
CAATTAAATTGAGGGTAATTCGCGTAATCGGATTACCTGGCACGGTCGTT
GGAGAATGGGCGAGGTACTCGATACAAGCGGCCCCTGTTCCATGTCCGAA
GAGGCTCACTTGCTTGGGATCCCCTCCAAAGTGAAGCACATTTTCTTGGA
CCCACTGCAAGACGGCCATTTGGTCCATAATGCCGTAATTGGCAACTTGG
CCCCGTGATAAAGGAGACCCATTTGTATTCAGGAAACCTGTCGAGGAACG
AGGGATATATGCAGTGAGGATGACAAGTCAGCAAATCCCGGGTGGGACGA
ATTTGATCCCAAAATAATGACGGGCTATTACTCAGCGCTTGATACCCTGG
ATCACGTGGGAGATACATTTAAAGATTGGACCCACCAGATGGAAGATCGT
GATGCCAGATTCCGCGGGTTTGGGACTAAAAATACCCCTTTCAACGCATC
AAGGCGACGACAAGATGAAGTTGATGAGGATGGGCAAGCATCATGCACTT
CAGATTGTTCCTGGAACGTCATGTTCCTTTCAACGCCAAAGTTTCCCAAC
AATCGTGGAGGGGAAAATGGCAAATCTGGATTTTTGCCTGCTCGGACAAG
AGAACAAAAAGCTTCGCTTCGCTTGGTGACAGCTCTGGGGGTTTATGATG
GCTAATAACTTTTAATGTGTAGTTAATGTGGAACCATGGGGATCCAAGGT
CGTTCGAAAAGTAGATAAGGAACCAGGTTGGCAGTTAAGCTAAAGCCAAG
ACAGGTCTGTCCAATTTATTGACCACCTCCGTGTTCCGCATGAGACCATG
GAAACTTGCTCATTGGTTTACGCCACCAATAGTCGCCATGTTTGACACCT
CCTCATCTAAACCACAGCATTAGTGTATAGATACAAGCAATCATAAGGGT
GTTCAGAACAATACGTGAAAATGATCATCATTTGAACGGCTCAATCATGG
ATTCCTATGAATGTAGAGATTGTTGTGCCTAAATCAGCGAAATAGAAAAA
TACCCTAATAAAAAATACTAGACAAAGAACAGAAGCATGAAGGATATAGG
CGTTATAACACAGACAGGGCAAATAGCAAGACTAGAACATGAACAGGGTG
AAAACGGTCAAAAAGCTATCTGACAAAACTTGAACGATGAAAACACTGAT
CCAAGTTAACCAGATTCATACTCCAATGCACCAATCATTAGGCGTACGTA
AGGAACATTCAATGAAGAATATAACCGGTATTTTATGAGAAAAAATCCAT
CACCAATGCATTTTTTTGGCTGCTTGAGTTAAAGTGATGGTTAACGTTGT
TTTTTAATTTTGATAATAGAAAAAAAGGAAAAAACACATATTTGCGACCA
ACGCTTTCTATGATGCACATCGTATTTTAAAATGCCAACACATACATGTA
CTGTGTACAGAATGTAAAAAACATATTGTAAACATAGGTTTAAGTATCAG
CACCCTTCTTTGCAGAGGGTTCTACTTTGTAGTTGCATTTTCTGTCTACT
AAATCTAACAATTTTTAGTGTGAAAGAAAAGCCTCCCACACTTTAGGTTA
GGAAACATGCAATGAAGACGTGAGAAAAAAAGGCCAAAAGCGAGTCAATT
GGTTTTCTTTTCGAATTAAAAAAGCCTTGGGAAAATCGCAACCTTCTACT
CACCCAGAACTCCAATGCGATAGTTGAAGGTTATGACGAGCACATTTCCG
TGAGAGGCGAGGACGCGAGCATCCCACAAATTTCCTGAGCCCCACGAGAA
GGATTCTCCATGGACGTAGACCATCACGGGGAGGAGTTCGTTCAGACCTG
CAAGGGGCAAATGAGTGTTTTTACTGTATGAATTTACAGCATGTGAGTTG
GGCACATGCGGTAGACTTTGGGAAGCCTTAAAAGGGATCAAAGGTATGTA
CGTACTCACGCACATTTATATGACAGGTGGAAGACCCAGAAATGCAAGAA
ACTTCCCATAAAAGGCCGAACTTTGGGAGAAATCTTCGCAGTTTGATTCA
TCTCAAGTTGCCACCACCACATGCACTAGCCATTCGCTTTTGCTTGTAGC
CCTTTGAGTTTTTACTTTGCTTTATCTCCGCTAAACACGGAAAACCCCAC
CAGAACAATGGCATACGGACAAGCTAGCGCTGATCCCGCCATGGGCACCA
TCTCCGGCTTGTACCTGGACGATGAGTACTATCTTCGATACCCCAAGGGT
ATGAAGATGACCGACGGTATTCCTGACGACGTCATGGAGGTCGTTGATCC
TCATTGGAGCCAGTTTGCGCCCGCCAATCCCCTGATCCCTCACTTCTTTG
GGATCATGTTCTTCTTCTTGTGGATCATTTCCTTCTTGGGCAATGGCTGT
GTGATTTACATTTTCTTGAAAGTCAAGAGTCTCCGAACTCCGGTGAGTAG
GGATAGAATTAGGCAGTCTTGGCCCAAGGCTTGGGGATTTCACTGACGCC
TTCCCACTTCCAGACCAACATGTTTGTGATCAACTTGGCCTTGTCTGACT
TGATCATGATGACCACAATGGGACCACCCGTGACCATCAACGTCTTCATG
CAGAGATATTGGGCTTGGGGAGCCTTTGGATGCAAGCTCTACGGCTTCAC
TGGAGCCGTGTGCGGCGTCGTGTCCATCCTCTCCATGGTGGTAATCGGTT
ACGACCGATACAATGTCATTGTCAAGGGGTTCAATGGAGTCAAGATCACC
AGTGGCAAGGCTCTGGCTATCCTCTTCGCCATTTGGGGCTACTCCGTGGG
CATCTCTCTCCCCCCTCTGTTGAACATCTGGGGTGGATTCACCACGGAGG
GCATGCTCTTCACCTGCTCCTACGACTACTTGAACCAGGACTTCAACCAC
AAGAGCTACGTCCTCTTTGGCTTCTTCTTCTGCTACCTCATCCCCATGAC
CATGATCTTCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTACCTCATCCCCATGACCATGATC
TTCTTCTTCTACAGCAGCATCGTCAAAGCCGTCTGGGCTCATGA

Synonyms

The feature 'long-wavelength rhodopsin' has the following synonyms


Synonym
Tk11817

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