maker-scaffold71_size417697-snap-gene-3.16-mRNA-1, maker-scaffold71_size417697-snap-gene-3.16-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namemaker-scaffold71_size417697-snap-gene-3.16-mRNA-1
Unique Namemaker-scaffold71_size417697-snap-gene-3.16-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold71_size417697supercontigscaffold71_size417697:309863..314706 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
long-wavelength rhodopsinmaker-scaffold71_size417697-snap-gene-3.16Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
maker-scaffold71_size417697-snap-gene-3.16-mRNA-1:exon:591maker-scaffold71_size417697-snap-gene-3.16-mRNA-1:exon:591Tigriopus kingsejongensisexon
maker-scaffold71_size417697-snap-gene-3.16-mRNA-1:exon:592maker-scaffold71_size417697-snap-gene-3.16-mRNA-1:exon:592Tigriopus kingsejongensisexon
maker-scaffold71_size417697-snap-gene-3.16-mRNA-1:exon:593maker-scaffold71_size417697-snap-gene-3.16-mRNA-1:exon:593Tigriopus kingsejongensisexon
maker-scaffold71_size417697-snap-gene-3.16-mRNA-1:exon:594maker-scaffold71_size417697-snap-gene-3.16-mRNA-1:exon:594Tigriopus kingsejongensisexon
maker-scaffold71_size417697-snap-gene-3.16-mRNA-1:cdsmaker-scaffold71_size417697-snap-gene-3.16-mRNA-1:cdsTigriopus kingsejongensisexon
maker-scaffold71_size417697-snap-gene-3.16-mRNA-1:cdsmaker-scaffold71_size417697-snap-gene-3.16-mRNA-1:cds-2016218Tigriopus kingsejongensisexon
maker-scaffold71_size417697-snap-gene-3.16-mRNA-1:cdsmaker-scaffold71_size417697-snap-gene-3.16-mRNA-1:cds-2016219Tigriopus kingsejongensisexon
maker-scaffold71_size417697-snap-gene-3.16-mRNA-1:cdsmaker-scaffold71_size417697-snap-gene-3.16-mRNA-1:cds-2016220Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto2016221auto2016221Tigriopus kingsejongensispolypeptide
Tk11817Tk11817Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk11817

>Tk11817 ID=Tk11817|Name=Tk11817|organism=Tigriopus kingsejongensis|type=polypeptide|length=325bp
MNLEEMRYQGMGAYLVPKLLLPLMSAKLSLMVTPSKLGPKSKSNEGTLSL
AWISCSTGTFLKQATISSWSPLSFYFALSPLNTENPTRTMAYGQASADPA
MGTISGLYLDDEYYLRYPKGMKMTDGIPDDVMEVVDPHWSQFAPANPLIP
HFFGIMFFFLWIISFLGNGCVIYIFLKVKSLRTPTNMFVINLALSDLIMM
TTMGPPVTINVFMQRYWAWGAFGCKLYGFTGAVCGVVSILSMVVIGYDRY
NVIVKGFNGVKITSGKALAILFAIWGYSVGISLPPLLNIWGGFTTEGMLF
TCSYDYLNQDFNHKSYQHRQSRLGS
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mRNA from alignment at scaffold71_size417697:309863..314706-

Legend: polypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold71_size417697-snap-gene-3.16-mRNA-1 ID=maker-scaffold71_size417697-snap-gene-3.16-mRNA-1|Name=maker-scaffold71_size417697-snap-gene-3.16-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=4844bp|location=Sequence derived from alignment at scaffold71_size417697:309863..314706- (Tigriopus kingsejongensis)
ATGAACTTGGAAGAAATGAGATATCAGGGCATGGGGGCATACCTCGTGCC
GAAGCTCCTTTTGCCTTTGATGTCAGCGAAATTGTCTTTGATGGTGACGC
CATCGAAGCTGGGTCCAAAGTCCAAGTCGAATGAGGGCACACTCAGCCTG
GCCTGGATCAGCTGTTCCACCGGCACGTTCCTCAAGCAGGCCACGATTTC
CTCGTGGTCGTGAGTGAGATCGCTGGGGATGGAACAGTTGAATTTCTTGC
CCAACTGAACCGCATAATTGAGGGGATCCTTCACGCGGGACCACGAGGCA
AACAGGGATCCAGACATCAGGATGACCCGGTGGAAGAGCCCTGGAAGTGC
AAGAAAGTTCGGGGAACAAAGGCGGGGAAGGATGCATTCATGTCTTAATA
TCCCTCCTCGGAGCAGGATCCATCCTCGGCCCAGGGAATGGGGTTCCACC
CGTGCTTGGACACGGGGCAATTTTTGAAGAGCCATAAACTTTTATTATAA
TTCAATTCAACAAAGAGCGGATTTTTTAGGGCCCCTTTGTTCGAGACCAT
CGTCTTAAAACCCGAGATTAGGACCAGGAAAAGGGAATAGGGCGAGATAT
GATATTTGGCGGTCCGGCCCTACTTTTTGTCAGCTCCGGTTGACTACCAT
TAAAACTTTATGTTGATAGTGTTCCAGTAATATATAGGCCTTGGCCGTCC
AGTTCGATCCAGAGCTGTGTATACCATTTTTGAGTCCCGTCAAATCCCGC
TTTGACCTCTTCGAGAGGATTATCAATCGCGTACCTCTAGACGCCTTGCG
CTGGAAAGCCTGATCAATACTACTTTGGAAGGCTTTTACGAAGAGCAACG
TGGATTTTGAGTATAATAACCAAAACACAATTTTCCTCATTTAAATAGGA
AGTTGCACCTTTCACTTTCTTTAATCCTAATTTTGTTTAGCTTGTTGGAA
GCCCACAAAGGTGTTTAAAATAACCGAAAAAATGAGACCACCCAGGGCAT
GGAGATGATAACCCATTGCCTGTGCCGAGGAACACATTCTAACTTTTGAT
GTTCCCTAGATGCAAACAAAGCAAGCTATTGGACTATTTTTAGGGACCGT
GAACGTCAATCGATCAATTTTACTCGTTAGATTCCCACCATTCGTGGCCA
GGGGTTTCAACAACTTCAAGACGTACTTATGCATTGTATCCTCTCATAGC
TGGGGTGGCAGTTTTTGCGTAAATTAGCCTTGCGCTAATTTTGAACGCTG
GACACATTGATCTTGGACGGTATGGCCTCTTGGTTATAGCTTCTGAGCAA
ATGGAAAAGGGTAGGTGGATTAGCTGATATCTCCTTTGCAAATAGGTCAT
CTTTGGTCACTGGTCACCCCATTGAAGGTCATATCAGTATATAAACCGCC
TTTGTTTACATCCTCCCACACTAAAAGCTTGGAAGGTTGCGCGTGCGATG
TAAAAACTTTCCGATAAACCTGTCCTGATTGAAAAGCCTTTTGGATTGGA
ATAAGATAGCTCTGGTTATTTCATTCAAAGTCCATGCATATCTTCAACCA
TAAAACGTTCAAACTCTTGACAGCTATCCAGTACAGAGAGTCTCGAGGTA
CAAGATTCAATGAGTGGCTCCCAAAAGGGGGCCATATTCAAGCCCCTATT
GTCTGCTACTCCCTCTTGGGCGGTGTCTTGCCAAGGTGGTGGGCCATTTG
CAATTAAATTGAGGGTAATTCGCGTAATCGGATTACCTGGCACGGTCGTT
GGAGAATGGGCGAGGTACTCGATACAAGCGGCCCCTGTTCCATGTCCGAA
GAGGCTCACTTGCTTGGGATCCCCTCCAAAGTGAAGCACATTTTCTTGGA
CCCACTGCAAGACGGCCATTTGGTCCATAATGCCGTAATTGGCAACTTGG
CCCCGTGATAAAGGAGACCCATTTGTATTCAGGAAACCTGTCGAGGAACG
AGGGATATATGCAGTGAGGATGACAAGTCAGCAAATCCCGGGTGGGACGA
ATTTGATCCCAAAATAATGACGGGCTATTACTCAGCGCTTGATACCCTGG
ATCACGTGGGAGATACATTTAAAGATTGGACCCACCAGATGGAAGATCGT
GATGCCAGATTCCGCGGGTTTGGGACTAAAAATACCCCTTTCAACGCATC
AAGGCGACGACAAGATGAAGTTGATGAGGATGGGCAAGCATCATGCACTT
CAGATTGTTCCTGGAACGTCATGTTCCTTTCAACGCCAAAGTTTCCCAAC
AATCGTGGAGGGGAAAATGGCAAATCTGGATTTTTGCCTGCTCGGACAAG
AGAACAAAAAGCTTCGCTTCGCTTGGTGACAGCTCTGGGGGTTTATGATG
GCTAATAACTTTTAATGTGTAGTTAATGTGGAACCATGGGGATCCAAGGT
CGTTCGAAAAGTAGATAAGGAACCAGGTTGGCAGTTAAGCTAAAGCCAAG
ACAGGTCTGTCCAATTTATTGACCACCTCCGTGTTCCGCATGAGACCATG
GAAACTTGCTCATTGGTTTACGCCACCAATAGTCGCCATGTTTGACACCT
CCTCATCTAAACCACAGCATTAGTGTATAGATACAAGCAATCATAAGGGT
GTTCAGAACAATACGTGAAAATGATCATCATTTGAACGGCTCAATCATGG
ATTCCTATGAATGTAGAGATTGTTGTGCCTAAATCAGCGAAATAGAAAAA
TACCCTAATAAAAAATACTAGACAAAGAACAGAAGCATGAAGGATATAGG
CGTTATAACACAGACAGGGCAAATAGCAAGACTAGAACATGAACAGGGTG
AAAACGGTCAAAAAGCTATCTGACAAAACTTGAACGATGAAAACACTGAT
CCAAGTTAACCAGATTCATACTCCAATGCACCAATCATTAGGCGTACGTA
AGGAACATTCAATGAAGAATATAACCGGTATTTTATGAGAAAAAATCCAT
CACCAATGCATTTTTTTGGCTGCTTGAGTTAAAGTGATGGTTAACGTTGT
TTTTTAATTTTGATAATAGAAAAAAAGGAAAAAACACATATTTGCGACCA
ACGCTTTCTATGATGCACATCGTATTTTAAAATGCCAACACATACATGTA
CTGTGTACAGAATGTAAAAAACATATTGTAAACATAGGTTTAAGTATCAG
CACCCTTCTTTGCAGAGGGTTCTACTTTGTAGTTGCATTTTCTGTCTACT
AAATCTAACAATTTTTAGTGTGAAAGAAAAGCCTCCCACACTTTAGGTTA
GGAAACATGCAATGAAGACGTGAGAAAAAAAGGCCAAAAGCGAGTCAATT
GGTTTTCTTTTCGAATTAAAAAAGCCTTGGGAAAATCGCAACCTTCTACT
CACCCAGAACTCCAATGCGATAGTTGAAGGTTATGACGAGCACATTTCCG
TGAGAGGCGAGGACGCGAGCATCCCACAAATTTCCTGAGCCCCACGAGAA
GGATTCTCCATGGACGTAGACCATCACGGGGAGGAGTTCGTTCAGACCTG
CAAGGGGCAAATGAGTGTTTTTACTGTATGAATTTACAGCATGTGAGTTG
GGCACATGCGGTAGACTTTGGGAAGCCTTAAAAGGGATCAAAGGTATGTA
CGTACTCACGCACATTTATATGACAGGTGGAAGACCCAGAAATGCAAGAA
ACTTCCCATAAAAGGCCGAACTTTGGGAGAAATCTTCGCAGTTTGATTCA
TCTCAAGTTGCCACCACCACATGCACTAGCCATTCGCTTTTGCTTGTAGC
CCTTTGAGTTTTTACTTTGCTTTATCTCCGCTAAACACGGAAAACCCCAC
CAGAACAATGGCATACGGACAAGCTAGCGCTGATCCCGCCATGGGCACCA
TCTCCGGCTTGTACCTGGACGATGAGTACTATCTTCGATACCCCAAGGGT
ATGAAGATGACCGACGGTATTCCTGACGACGTCATGGAGGTCGTTGATCC
TCATTGGAGCCAGTTTGCGCCCGCCAATCCCCTGATCCCTCACTTCTTTG
GGATCATGTTCTTCTTCTTGTGGATCATTTCCTTCTTGGGCAATGGCTGT
GTGATTTACATTTTCTTGAAAGTCAAGAGTCTCCGAACTCCGGTGAGTAG
GGATAGAATTAGGCAGTCTTGGCCCAAGGCTTGGGGATTTCACTGACGCC
TTCCCACTTCCAGACCAACATGTTTGTGATCAACTTGGCCTTGTCTGACT
TGATCATGATGACCACAATGGGACCACCCGTGACCATCAACGTCTTCATG
CAGAGATATTGGGCTTGGGGAGCCTTTGGATGCAAGCTCTACGGCTTCAC
TGGAGCCGTGTGCGGCGTCGTGTCCATCCTCTCCATGGTGGTAATCGGTT
ACGACCGATACAATGTCATTGTCAAGGGGTTCAATGGAGTCAAGATCACC
AGTGGCAAGGCTCTGGCTATCCTCTTCGCCATTTGGGGCTACTCCGTGGG
CATCTCTCTCCCCCCTCTGTTGAACATCTGGGGTGGATTCACCACGGAGG
GCATGCTCTTCACCTGCTCCTACGACTACTTGAACCAGGACTTCAACCAC
AAGAGCTACGTCCTCTTTGGCTTCTTCTTCTGCTACCTCATCCCCATGAC
CATGATCTTCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTACCTCATCCCCATGACCATGATC
TTCTTCTTCTACAGCAGCATCGTCAAAGCCGTCTGGGCTCATGA
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