Hypothetical protein CBG01951, maker-scaffold723_size106546-snap-gene-0.22 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of Hypothetical protein CBG01951 vs. L. salmonis genes
Match: EMLSAG00000007844 (supercontig:LSalAtl2s:LSalAtl2s45:859513:867489:1 gene:EMLSAG00000007844 transcript:EMLSAT00000007844 description:"maker-LSalAtl2s45-snap-gene-8.66") HSP 1 Score: 59.3066 bits (142), Expect = 1.478e-9 Identity = 36/113 (31.86%), Postives = 56/113 (49.56%), Query Frame = 0 Query: 185 PATFGKHV--GIHFEGQAIETVPWHACNNVSLPISPMEQG--FQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHS--------GFKRITGRDESIKIPVIFLLKKES 285 PA FGK + G +G+A+ P+ AC + +E G F IVERG+C F EKA+ ++ G IV+D D S G G+ + + IP++FL +++ Sbjct: 647 PAQFGKELSNGYKAKGKAVVASPYKACGD-------LENGKEFWGKIGIVERGDCMFIEKARLLESLGAVGGIVIDANDGSTSKASPLFGMTGDKGKSDDVSIPLVFLFNEDA 752
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|122230870|sp|Q10R93.1|RMR1_ORYSJ (RecName: Full=Receptor homology region, transmembrane domain- and RING domain-containing protein 1; Short=OsRMR1; Flags: Precursor) HSP 1 Score: 65.855 bits (159), Expect = 2.667e-10 Identity = 37/108 (34.26%), Postives = 54/108 (50.00%), Query Frame = 0 Query: 184 IPATFGKHV-GIHFEGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRR 290 + A+F V G FEG P AC+ ++ S E+G FA++ RG C F EK K QDAGF+A IV DN + + G I I +F+ K + +++ Sbjct: 42 VEASFAPGVKGSGFEGVVYTAEPLDACSPLT---SKAEKGPPSPFALIIRGGCTFDEKVKNAQDAGFKAAIVYDNENSGVLISMAGSSGGIHIYAVFISKASGEVLKK 146
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|224471825|sp|Q2HXL6.2|EDEM3_MOUSE (RecName: Full=ER degradation-enhancing alpha-mannosidase-like protein 3; AltName: Full=Alpha-1,2-mannosidase EDEM3; Flags: Precursor) HSP 1 Score: 64.6994 bits (156), Expect = 8.215e-10 Identity = 43/138 (31.16%), Postives = 69/138 (50.00%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED 304 R VL PA FG + H E G + P++ C+ ++ P + M + A+++RG C FAEKA+ +Q+AG IV+D+ + S G+D + IKIP++FL KE I + +++ V D Sbjct: 660 GRVVLTAGPAQFGLDLSKHKETRGFVASSKPYNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREHEQVEVLLSD 792
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|166897965|sp|Q9BZQ6.2|EDEM3_HUMAN (RecName: Full=ER degradation-enhancing alpha-mannosidase-like protein 3; AltName: Full=Alpha-1,2-mannosidase EDEM3; Flags: Precursor) HSP 1 Score: 62.003 bits (149), Expect = 5.687e-9 Identity = 43/138 (31.16%), Postives = 68/138 (49.28%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED 304 R VL PA FG + H E G + P + C+ ++ P + M + A+++RG C FAEKA+ +Q+AG IV+D+ + S G+D + IKIP++FL KE I + +++ V D Sbjct: 659 GRVVLTAGPAQFGLDLSKHKETRGFVASSKPSNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREYEEVEVLLSD 791
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|224487992|sp|Q6GQB9.2|EDEM3_XENLA (RecName: Full=ER degradation-enhancing alpha-mannosidase-like protein 3; AltName: Full=Alpha-1,2-mannosidase EDEM3; Flags: Precursor) HSP 1 Score: 60.4622 bits (145), Expect = 1.781e-8 Identity = 41/139 (29.50%), Postives = 66/139 (47.48%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHF---EGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSG-----FKRITGRDES---IKIPVIFLLKKESDKIRRMLLLQKKLRVAFED 304 R VL PA FG + H +G P+ C++++ Q Q A+++RG C FAEKA+ VQ AG IV+D+ + S ++ G +S + IP++FL KE + I + +++ V D Sbjct: 645 GRVVLTAGPAQFGMDLSKHLAGAQGLVARAEPYSGCSDIT-----NGQAIQGKIALMQRGQCMFAEKARNVQKAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKSTDDVTIPMLFLFSKEGNIILDAIREYQQVEVLLSD 778
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|576017832|sp|F4I2Y3.1|RMR3_ARATH (RecName: Full=Receptor homology region, transmembrane domain- and RING domain-containing protein 3; Short=AtRMR3; Flags: Precursor) HSP 1 Score: 54.299 bits (129), Expect = 9.147e-7 Identity = 31/105 (29.52%), Postives = 48/105 (45.71%), Query Frame = 0 Query: 186 ATFGKHVGIHFEGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRR 290 A F V G P +AC N+ G L I+ RG C F K + Q +GF+A IV DN D + + G + IKI +F++K+ + +++ Sbjct: 41 ADFSPSVTTVETGVVYVAEPLNACRNLRNKPEQSPYGTSPLVLII-RGGCSFEYKVRNAQRSGFKAAIVYDNVDRNFLSAMGGDSDGIKIQAVFVMKRAGEMLKK 144
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1029015532|ref|XP_016671651.1| (PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2-like [Gossypium hirsutum]) HSP 1 Score: 65.4698 bits (158), Expect = 8.842e-8 Identity = 32/87 (36.78%), Postives = 48/87 (55.17%), Query Frame = 0 Query: 205 PWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRRM 291 P AC+++S+ + + G FA+V RG C F EK +RVQ AGF+A IV DN D + G IKI +F+ K + +++ Sbjct: 65 PLDACSDLSIKVDELSNG-SSPFALVIRGGCSFEEKVRRVQKAGFEAAIVYDNDDDGVLVAMAGNAAGIKIHAVFVSKASGEILKKF 150
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|357168387|ref|XP_003581622.1| (PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 1 isoform X1 [Brachypodium distachyon] >gi|944046332|gb|KQJ81973.1| hypothetical protein BRADI_5g04590v3 [Brachypodium distachyon] >gi|944046334|gb|KQJ81975.1| hypothetical protein BRADI_5g04590v3 [Brachypodium distachyon]) HSP 1 Score: 64.3142 bits (155), Expect = 8.871e-8 Identity = 36/108 (33.33%), Postives = 50/108 (46.30%), Query Frame = 0 Query: 185 PATFGKHV-GIHFEGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRRM 291 PA FG V G G P AC PI R F +V RGNC F +K + Q AGF A++V D+ + + + G E I IP +FL K + +++ Sbjct: 32 PARFGPRVSGDGICGSLRSADPSDACT----PIKNSAGSGGRAFVLVVRGNCSFEDKVREAQRAGFNAVVVYDDEEKASLYSMVGDSEGIHIPAVFLSKMAGETLKKF 135
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|823173381|ref|XP_012485434.1| (PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2 [Gossypium raimondii] >gi|763768641|gb|KJB35856.1| hypothetical protein B456_006G130700 [Gossypium raimondii]) HSP 1 Score: 65.4698 bits (158), Expect = 9.080e-8 Identity = 32/87 (36.78%), Postives = 48/87 (55.17%), Query Frame = 0 Query: 205 PWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRRM 291 P AC+++S+ + + G FA+V RG C F EK +RVQ AGF+A IV DN D + G IKI +F+ K + +++ Sbjct: 65 PLDACSDLSIKVDELSNG-SSPFALVIRGGCSFEEKVRRVQKAGFEAAIVYDNDDDGVLVAMAGNAAGIKIHAVFVSKASGEILKKF 150
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1050579946|ref|XP_017611052.1| (PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2 [Gossypium arboreum] >gi|728809327|gb|KHF98930.1| E3 ubiquitin-protein ligase [Gossypium arboreum]) HSP 1 Score: 65.4698 bits (158), Expect = 9.080e-8 Identity = 32/87 (36.78%), Postives = 48/87 (55.17%), Query Frame = 0 Query: 205 PWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRRM 291 P AC+++S+ + + G FA+V RG C F EK +RVQ AGF+A IV DN D + G IKI +F+ K + +++ Sbjct: 65 PLDACSDLSIKVDELSNG-SSPFALVIRGGCSFEEKVRRVQKAGFEAAIVYDNDDDGVLVAMAGNAAGIKIHAVFVSKASGEILKKF 150
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1029010782|ref|XP_016669232.1| (PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2-like [Gossypium hirsutum]) HSP 1 Score: 65.4698 bits (158), Expect = 9.161e-8 Identity = 32/87 (36.78%), Postives = 48/87 (55.17%), Query Frame = 0 Query: 205 PWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRRM 291 P AC+++S+ + + G FA+V RG C F EK +RVQ AGF+A IV DN D + G IKI +F+ K + +++ Sbjct: 65 PLDACSDLSIKVDELSNG-SSPFALVIRGGCSFEEKVRRVQKAGFEAAIVYDNDDDGVLVAMAGNAAGIKIHAVFVSKASGEILKKF 150
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|222624258|gb|EEE58390.1| (hypothetical protein OsJ_09552 [Oryza sativa Japonica Group]) HSP 1 Score: 65.4698 bits (158), Expect = 9.182e-8 Identity = 37/109 (33.94%), Postives = 54/109 (49.54%), Query Frame = 0 Query: 184 IPATFGKHV-GIHFEGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRRM 291 + A+F V G FEG P AC+ ++ S E+G FA++ RG C F EK K QDAGF+A IV DN + + G I I +F+ K + +++ Sbjct: 12 VEASFAPGVKGSGFEGVVYTAEPLDACSPLT---SKAEKGPPSPFALIIRGGCTFDEKVKNAQDAGFKAAIVYDNENSGVLISMAGSSGGIHIYAVFISKASGEVLKKF 117
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1333092444|ref|XP_023533724.1| (receptor homology region, transmembrane domain- and RING domain-containing protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 65.4698 bits (158), Expect = 9.392e-8 Identity = 32/90 (35.56%), Postives = 48/90 (53.33%), Query Frame = 0 Query: 205 PWHAC----NNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRR 290 P AC NNV LP++ FA++ RG C F +K +R Q AGF+A IV DN+D G + G I+I +F+ K + +++ Sbjct: 64 PLDACATLENNVQLPVTNSSP-----FALIIRGGCSFEDKVRRAQVAGFKAAIVYDNKDGGGLIAMAGSSAGIRIHAVFVTKSSGETLKK 148
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|344238857|gb|EGV94960.1| (ER degradation-enhancing alpha-mannosidase-like 3 [Cricetulus griseus]) HSP 1 Score: 65.4698 bits (158), Expect = 1.001e-7 Identity = 53/183 (28.96%), Postives = 82/183 (44.81%), Query Frame = 0 Query: 178 RSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED-SRLFTPFEHNPDPTPHRGDHLQNPTVIHFNKFRTKYPLTVQNDPR 349 R VL PA FG + H E G + P++ C+ ++ P + M + A+++RG C FAEKA+ +Q+AG IV+D+ + S G+D + IKIP++FL KE I + +++ V D +R N D P D QN + + L Q P Sbjct: 203 RVVLTAGPAQFGLDLSKHKETRGFVASSKPYNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREHEEVEVLLSDKARDRDTEMENEDQPPSENDS-QNQSAEQLLSLSQTFDLIDQETPE 379
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|326488691|dbj|BAJ97957.1| (predicted protein, partial [Hordeum vulgare subsp. vulgare] >gi|326523861|dbj|BAJ96941.1| predicted protein, partial [Hordeum vulgare subsp. vulgare]) HSP 1 Score: 65.4698 bits (158), Expect = 1.036e-7 Identity = 38/113 (33.63%), Postives = 55/113 (48.67%), Query Frame = 0 Query: 184 IPATFGKHV-GIHFEGQAIETVPWHACN-----NVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRR 290 + ATF V G G P AC+ V P+SP FA+V RG C+F +K + QDAGF+A+IV DN+DH + G I I +F+ K + +++ Sbjct: 49 VEATFTPEVKGSGLNGVIYTVEPLDACSPLTKKAVEGPVSP--------FALVLRGGCQFDDKVRNAQDAGFKAVIVYDNKDHGVLVSMAGSSSGIDIYAVFISKTSGEVLKK 153
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|309365436|emb|CAP23144.2| (Protein CBG01952 [Caenorhabditis briggsae]) HSP 1 Score: 65.855 bits (159), Expect = 1.256e-7 Identity = 44/147 (29.93%), Postives = 74/147 (50.34%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE---GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGR-----------DESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFEDSRLFT 309 +++LQ PA FG+ + G + ++P+ AC+ I ++ ++ AIVER C F EKA+RVQ AG +IV+D +++ F +GR + I+IP +FL + E DK+ + K+ +A R+ T Sbjct: 665 GKTILQASPAQFGRDLATTTRPVYGPVVISIPYRACDE----IVNKDEMIGKV-AIVERSGCVFQEKARRVQQAGAIGMIVIDTEENTKFA--SGRPPFSMASDKDGKDDIEIPSLFLFRLEGDKLLHAMEKNKETVIAMTSQRVST 804 The following BLAST results are available for this feature:
BLAST of Hypothetical protein CBG01951 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 5
BLAST of Hypothetical protein CBG01951 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold723_size106546:101481..103119- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold723_size106546-snap-gene-0.22 ID=maker-scaffold723_size106546-snap-gene-0.22|Name=Hypothetical protein CBG01951|organism=Tigriopus kingsejongensis|type=gene|length=1639bp|location=Sequence derived from alignment at scaffold723_size106546:101481..103119- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'Hypothetical protein CBG01951' has the following synonyms
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