Hypothetical protein CBG01951, maker-scaffold723_size106546-snap-gene-0.22 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of Hypothetical protein CBG01951 vs. L. salmonis genes
Match: EMLSAG00000007844 (supercontig:LSalAtl2s:LSalAtl2s45:859513:867489:1 gene:EMLSAG00000007844 transcript:EMLSAT00000007844 description:"maker-LSalAtl2s45-snap-gene-8.66") HSP 1 Score: 59.3066 bits (142), Expect = 1.478e-9 Identity = 36/113 (31.86%), Postives = 56/113 (49.56%), Query Frame = 0 Query: 185 PATFGKHV--GIHFEGQAIETVPWHACNNVSLPISPMEQG--FQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHS--------GFKRITGRDESIKIPVIFLLKKES 285 PA FGK + G +G+A+ P+ AC + +E G F IVERG+C F EKA+ ++ G IV+D D S G G+ + + IP++FL +++ Sbjct: 647 PAQFGKELSNGYKAKGKAVVASPYKACGD-------LENGKEFWGKIGIVERGDCMFIEKARLLESLGAVGGIVIDANDGSTSKASPLFGMTGDKGKSDDVSIPLVFLFNEDA 752
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|122230870|sp|Q10R93.1|RMR1_ORYSJ (RecName: Full=Receptor homology region, transmembrane domain- and RING domain-containing protein 1; Short=OsRMR1; Flags: Precursor) HSP 1 Score: 65.855 bits (159), Expect = 2.667e-10 Identity = 37/108 (34.26%), Postives = 54/108 (50.00%), Query Frame = 0 Query: 184 IPATFGKHV-GIHFEGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRR 290 + A+F V G FEG P AC+ ++ S E+G FA++ RG C F EK K QDAGF+A IV DN + + G I I +F+ K + +++ Sbjct: 42 VEASFAPGVKGSGFEGVVYTAEPLDACSPLT---SKAEKGPPSPFALIIRGGCTFDEKVKNAQDAGFKAAIVYDNENSGVLISMAGSSGGIHIYAVFISKASGEVLKK 146
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|224471825|sp|Q2HXL6.2|EDEM3_MOUSE (RecName: Full=ER degradation-enhancing alpha-mannosidase-like protein 3; AltName: Full=Alpha-1,2-mannosidase EDEM3; Flags: Precursor) HSP 1 Score: 64.6994 bits (156), Expect = 8.215e-10 Identity = 43/138 (31.16%), Postives = 69/138 (50.00%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED 304 R VL PA FG + H E G + P++ C+ ++ P + M + A+++RG C FAEKA+ +Q+AG IV+D+ + S G+D + IKIP++FL KE I + +++ V D Sbjct: 660 GRVVLTAGPAQFGLDLSKHKETRGFVASSKPYNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREHEQVEVLLSD 792
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|166897965|sp|Q9BZQ6.2|EDEM3_HUMAN (RecName: Full=ER degradation-enhancing alpha-mannosidase-like protein 3; AltName: Full=Alpha-1,2-mannosidase EDEM3; Flags: Precursor) HSP 1 Score: 62.003 bits (149), Expect = 5.687e-9 Identity = 43/138 (31.16%), Postives = 68/138 (49.28%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED 304 R VL PA FG + H E G + P + C+ ++ P + M + A+++RG C FAEKA+ +Q+AG IV+D+ + S G+D + IKIP++FL KE I + +++ V D Sbjct: 659 GRVVLTAGPAQFGLDLSKHKETRGFVASSKPSNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREYEEVEVLLSD 791
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|224487992|sp|Q6GQB9.2|EDEM3_XENLA (RecName: Full=ER degradation-enhancing alpha-mannosidase-like protein 3; AltName: Full=Alpha-1,2-mannosidase EDEM3; Flags: Precursor) HSP 1 Score: 60.4622 bits (145), Expect = 1.781e-8 Identity = 41/139 (29.50%), Postives = 66/139 (47.48%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHF---EGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSG-----FKRITGRDES---IKIPVIFLLKKESDKIRRMLLLQKKLRVAFED 304 R VL PA FG + H +G P+ C++++ Q Q A+++RG C FAEKA+ VQ AG IV+D+ + S ++ G +S + IP++FL KE + I + +++ V D Sbjct: 645 GRVVLTAGPAQFGMDLSKHLAGAQGLVARAEPYSGCSDIT-----NGQAIQGKIALMQRGQCMFAEKARNVQKAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKSTDDVTIPMLFLFSKEGNIILDAIREYQQVEVLLSD 778
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|576017832|sp|F4I2Y3.1|RMR3_ARATH (RecName: Full=Receptor homology region, transmembrane domain- and RING domain-containing protein 3; Short=AtRMR3; Flags: Precursor) HSP 1 Score: 54.299 bits (129), Expect = 9.147e-7 Identity = 31/105 (29.52%), Postives = 48/105 (45.71%), Query Frame = 0 Query: 186 ATFGKHVGIHFEGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRR 290 A F V G P +AC N+ G L I+ RG C F K + Q +GF+A IV DN D + + G + IKI +F++K+ + +++ Sbjct: 41 ADFSPSVTTVETGVVYVAEPLNACRNLRNKPEQSPYGTSPLVLII-RGGCSFEYKVRNAQRSGFKAAIVYDNVDRNFLSAMGGDSDGIKIQAVFVMKRAGEMLKK 144
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1325310080|ref|XP_023336642.1| (uncharacterized protein LOC111707737 [Eurytemora affinis]) HSP 1 Score: 92.0485 bits (227), Expect = 1.607e-16 Identity = 87/312 (27.88%), Postives = 139/312 (44.55%), Query Frame = 0 Query: 34 TLHEDECVPCKEDATAYLGFNLLDEPILVETEA---DCALKCSEHQQCLFWSLDTQNGRCYLKYSRDKNAKLWHSYVSGVDNCA--GHSAQQGRILIPRDLS--EYT-LEFESKGLDPHSVRFPESENHRHQPASRESSSSPLLYVYLSGQS----RSVLQGIPATFGKHVGIH--FEGQAIETVPWHACNNVSLPISPMEQGF------QRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITG--RDESIKIPVIFLLKKESDKIRRMLLLQKK-LRVAFEDSRLFTPFEH---NPDPTP 319 T ++EC C E Y I V + +C + C + +C ++SLDT+ G C+LK + + SYVSG C S + R+ + R+ + +Y L+ E LD V+ N R E+ S P++ V + +++L GIPA FG + + F G+A+ P C+ I +L IV+RG C F+ KA+ + GF +++LDN + I G +++ P IFLLKKE+D + +L K L + +DS ++ P PTP Sbjct: 53 TEKKEECAECSEVGVLYSS-----TVISVHRTSKLEECRIFCQKDTRCKYFSLDTRRGSCHLKSTTNTKLGAPDSYVSGTKYCTHEKESLIKDRMKLMRNYNKDQYNELDSELLELDSADVQ----RNSRTMNLGLENKSYPVVIVEHGSEKQDNYKTILAGIPANFGLVISHNKSFVGKAVVFEPADLCSQRLADIRKKLDELKKEKPESKLIGIVKRGLCLFSTKAENAVNVGFDGMVILDNVGDTSVAYIKGAQKEKFKNFPAIFLLKKEADILVDILHKNKGYLTLHMQDSSTVNWYDVKDITPKPTP 355
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1273512272|gb|PIC16296.1| (hypothetical protein B9Z55_022950 [Caenorhabditis nigoni]) HSP 1 Score: 68.5514 bits (166), Expect = 1.611e-8 Identity = 45/147 (30.61%), Postives = 75/147 (51.02%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE---GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGR-----------DESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFEDSRLFT 309 +++LQ PA FG+ + G A+ ++P+ AC+ I ++ ++ AIVER C F EKA+RVQ AG +IV+D +++ F +GR + I+IP +FL + E DK+ + K+ +A R+ T Sbjct: 642 GKTILQASPAQFGRDLATTIRPVYGPAVISIPYRACDE----IVNKDEMIGKI-AIVERSGCVFQEKARRVQQAGAIGMIVIDTEENTKFA--SGRPPFSMASDKDGKDDIEIPSLFLFRLEGDKLLHAMEKNKETVIAMTSQRVST 781
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|268577543|ref|XP_002643754.1| (Hypothetical protein CBG01951 [Caenorhabditis briggsae]) HSP 1 Score: 66.6254 bits (161), Expect = 2.091e-8 Identity = 44/147 (29.93%), Postives = 74/147 (50.34%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE---GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGR-----------DESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFEDSRLFT 309 +++LQ PA FG+ + G + ++P+ AC+ I ++ ++ AIVER C F EKA+RVQ AG +IV+D +++ F +GR + I+IP +FL + E DK+ + K+ +A R+ T Sbjct: 14 GKTILQASPAQFGRDLATTTRPVYGPVVISIPYRACDE----IVNKDEMIGKV-AIVERSGCVFQEKARRVQQAGAIGMIVIDTEENTKFA--SGRPPFSMASDKDGKDDIEIPSLFLFRLEGDKLLHAMEKNKETVIAMTSQRVST 153
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|703093595|ref|XP_010094981.1| (receptor homology region, transmembrane domain- and RING domain-containing protein 2 [Morus notabilis] >gi|587868385|gb|EXB57740.1| E3 ubiquitin-protein ligase [Morus notabilis]) HSP 1 Score: 67.0106 bits (162), Expect = 2.621e-8 Identity = 35/104 (33.65%), Postives = 55/104 (52.88%), Query Frame = 0 Query: 205 PWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRRMLLLQKK---LRVAFEDS 305 P AC+ ++ + P + G FA++ RG C F EK +R Q+AGF+A IV DN + + G IKI +F+ K +K+++ L L +FE+S Sbjct: 59 PVDACSKLTNKVKPAKNG-SSPFALIIRGGCSFEEKVRRAQEAGFKAAIVYDNENGGALVAMAGNSAGIKIHAVFVSKASGEKLKKYAGLTDMEVWLIPSFENS 161
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|573923769|ref|XP_006649457.1| (PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 1 [Oryza brachyantha] >gi|573923771|ref|XP_006649458.1| PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 1 [Oryza brachyantha] >gi|1002847517|ref|XP_015690387.1| PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 1 [Oryza brachyantha]) HSP 1 Score: 66.6254 bits (161), Expect = 4.507e-8 Identity = 37/109 (33.94%), Postives = 54/109 (49.54%), Query Frame = 0 Query: 184 IPATFGKHV-GIHFEGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRRM 291 + A+F V G FEG P AC+ ++ S E+G FA++ RG C F EK K QDAGF+A IV DN + + G I I +F+ K + +++ Sbjct: 42 VEASFAPGVKGSGFEGIVYTAEPLDACSPLT---SKAEKGSPSPFALIIRGGCTFDEKVKNAQDAGFKAAIVYDNENSGVLISMAGSSSGIHIYAVFISKASGEVLKKF 147
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1016648525|ref|XP_007523869.2| (PREDICTED: ER degradation-enhancing alpha-mannosidase-like protein 3 isoform X1 [Erinaceus europaeus]) HSP 1 Score: 67.0106 bits (162), Expect = 5.122e-8 Identity = 50/161 (31.06%), Postives = 78/161 (48.45%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKES----DKIRR------MLLLQKKLRVAFEDSRLFTPFEHNPDP 317 R VL PA FG + H E G + + P++ C+ ++ P + + + A+V+RG C FAEKA+ +Q+AG IV+D+ D S G+D + IKIP++FL KE D IR +L + K R A ++ + N +P Sbjct: 647 GRVVLTAGPAQFGPDLSKHKETRGFVVSSKPYNGCSELTNPEAVLGK-----IALVQRGQCMFAEKARNIQNAGAIGGIVIDDNDGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREYEEVEVLLSDKAKDRAAILKGKMIPSYIINSNP 802
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|721689790|ref|XP_010239731.1| (PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 1 isoform X2 [Brachypodium distachyon] >gi|944046333|gb|KQJ81974.1| hypothetical protein BRADI_5g04590v3 [Brachypodium distachyon]) HSP 1 Score: 64.3142 bits (155), Expect = 5.269e-8 Identity = 36/108 (33.33%), Postives = 50/108 (46.30%), Query Frame = 0 Query: 185 PATFGKHV-GIHFEGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRRM 291 PA FG V G G P AC PI R F +V RGNC F +K + Q AGF A++V D+ + + + G E I IP +FL K + +++ Sbjct: 32 PARFGPRVSGDGICGSLRSADPSDACT----PIKNSAGSGGRAFVLVVRGNCSFEDKVREAQRAGFNAVVVYDDEEKASLYSMVGDSEGIHIPAVFLSKMAGETLKKF 135
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1016648529|ref|XP_016043948.1| (PREDICTED: ER degradation-enhancing alpha-mannosidase-like protein 3 isoform X2 [Erinaceus europaeus]) HSP 1 Score: 66.6254 bits (161), Expect = 6.010e-8 Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED 304 R VL PA FG + H E G + + P++ C+ ++ P + + + A+V+RG C FAEKA+ +Q+AG IV+D+ D S G+D + IKIP++FL KE I + +++ V D Sbjct: 647 GRVVLTAGPAQFGPDLSKHKETRGFVVSSKPYNGCSELTNPEAVLGK-----IALVQRGQCMFAEKARNIQNAGAIGGIVIDDNDGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREYEEVEVLLSD 779
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1016648533|ref|XP_016043949.1| (PREDICTED: ER degradation-enhancing alpha-mannosidase-like protein 3 isoform X3 [Erinaceus europaeus]) HSP 1 Score: 66.6254 bits (161), Expect = 6.179e-8 Identity = 44/138 (31.88%), Postives = 70/138 (50.72%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED 304 R VL PA FG + H E G + + P++ C+ ++ P + + + A+V+RG C FAEKA+ +Q+AG IV+D+ D S G+D + IKIP++FL KE I + +++ V D Sbjct: 629 GRVVLTAGPAQFGPDLSKHKETRGFVVSSKPYNGCSELTNPEAVLGK-----IALVQRGQCMFAEKARNIQNAGAIGGIVIDDNDGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREYEEVEVLLSD 761
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|87239929|dbj|BAE79485.1| (ER degradation enhancing alpha-mannosidase-like protein homologue [Mus musculus]) HSP 1 Score: 66.2402 bits (160), Expect = 8.406e-8 Identity = 44/138 (31.88%), Postives = 69/138 (50.00%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED 304 R VL PA FG + H E G + P++ C+ ++ P + M + A+++RG C FAEKA+ +Q+AG IV+D+ + S G+D + IKIP++FL KE I + K++ V D Sbjct: 660 GRVVLTAGPAQFGLDLSKHKETRGFVASSKPYNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREHKQVEVLLSD 792 The following BLAST results are available for this feature:
BLAST of Hypothetical protein CBG01951 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 5
BLAST of Hypothetical protein CBG01951 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold723_size106546:101481..103119- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold723_size106546-snap-gene-0.22 ID=maker-scaffold723_size106546-snap-gene-0.22|Name=Hypothetical protein CBG01951|organism=Tigriopus kingsejongensis|type=gene|length=1639bp|location=Sequence derived from alignment at scaffold723_size106546:101481..103119- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'Hypothetical protein CBG01951' has the following synonyms
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