Hypothetical protein CBG01951, maker-scaffold723_size106546-snap-gene-0.22 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of Hypothetical protein CBG01951 vs. L. salmonis genes
Match: EMLSAG00000007844 (supercontig:LSalAtl2s:LSalAtl2s45:859513:867489:1 gene:EMLSAG00000007844 transcript:EMLSAT00000007844 description:"maker-LSalAtl2s45-snap-gene-8.66") HSP 1 Score: 59.3066 bits (142), Expect = 1.478e-9 Identity = 36/113 (31.86%), Postives = 56/113 (49.56%), Query Frame = 0 Query: 185 PATFGKHV--GIHFEGQAIETVPWHACNNVSLPISPMEQG--FQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHS--------GFKRITGRDESIKIPVIFLLKKES 285 PA FGK + G +G+A+ P+ AC + +E G F IVERG+C F EKA+ ++ G IV+D D S G G+ + + IP++FL +++ Sbjct: 647 PAQFGKELSNGYKAKGKAVVASPYKACGD-------LENGKEFWGKIGIVERGDCMFIEKARLLESLGAVGGIVIDANDGSTSKASPLFGMTGDKGKSDDVSIPLVFLFNEDA 752
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|122230870|sp|Q10R93.1|RMR1_ORYSJ (RecName: Full=Receptor homology region, transmembrane domain- and RING domain-containing protein 1; Short=OsRMR1; Flags: Precursor) HSP 1 Score: 65.855 bits (159), Expect = 2.667e-10 Identity = 37/108 (34.26%), Postives = 54/108 (50.00%), Query Frame = 0 Query: 184 IPATFGKHV-GIHFEGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRR 290 + A+F V G FEG P AC+ ++ S E+G FA++ RG C F EK K QDAGF+A IV DN + + G I I +F+ K + +++ Sbjct: 42 VEASFAPGVKGSGFEGVVYTAEPLDACSPLT---SKAEKGPPSPFALIIRGGCTFDEKVKNAQDAGFKAAIVYDNENSGVLISMAGSSGGIHIYAVFISKASGEVLKK 146
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|224471825|sp|Q2HXL6.2|EDEM3_MOUSE (RecName: Full=ER degradation-enhancing alpha-mannosidase-like protein 3; AltName: Full=Alpha-1,2-mannosidase EDEM3; Flags: Precursor) HSP 1 Score: 64.6994 bits (156), Expect = 8.215e-10 Identity = 43/138 (31.16%), Postives = 69/138 (50.00%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED 304 R VL PA FG + H E G + P++ C+ ++ P + M + A+++RG C FAEKA+ +Q+AG IV+D+ + S G+D + IKIP++FL KE I + +++ V D Sbjct: 660 GRVVLTAGPAQFGLDLSKHKETRGFVASSKPYNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREHEQVEVLLSD 792
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|166897965|sp|Q9BZQ6.2|EDEM3_HUMAN (RecName: Full=ER degradation-enhancing alpha-mannosidase-like protein 3; AltName: Full=Alpha-1,2-mannosidase EDEM3; Flags: Precursor) HSP 1 Score: 62.003 bits (149), Expect = 5.687e-9 Identity = 43/138 (31.16%), Postives = 68/138 (49.28%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED 304 R VL PA FG + H E G + P + C+ ++ P + M + A+++RG C FAEKA+ +Q+AG IV+D+ + S G+D + IKIP++FL KE I + +++ V D Sbjct: 659 GRVVLTAGPAQFGLDLSKHKETRGFVASSKPSNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREYEEVEVLLSD 791
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|224487992|sp|Q6GQB9.2|EDEM3_XENLA (RecName: Full=ER degradation-enhancing alpha-mannosidase-like protein 3; AltName: Full=Alpha-1,2-mannosidase EDEM3; Flags: Precursor) HSP 1 Score: 60.4622 bits (145), Expect = 1.781e-8 Identity = 41/139 (29.50%), Postives = 66/139 (47.48%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHF---EGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSG-----FKRITGRDES---IKIPVIFLLKKESDKIRRMLLLQKKLRVAFED 304 R VL PA FG + H +G P+ C++++ Q Q A+++RG C FAEKA+ VQ AG IV+D+ + S ++ G +S + IP++FL KE + I + +++ V D Sbjct: 645 GRVVLTAGPAQFGMDLSKHLAGAQGLVARAEPYSGCSDIT-----NGQAIQGKIALMQRGQCMFAEKARNVQKAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKSTDDVTIPMLFLFSKEGNIILDAIREYQQVEVLLSD 778
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|576017832|sp|F4I2Y3.1|RMR3_ARATH (RecName: Full=Receptor homology region, transmembrane domain- and RING domain-containing protein 3; Short=AtRMR3; Flags: Precursor) HSP 1 Score: 54.299 bits (129), Expect = 9.147e-7 Identity = 31/105 (29.52%), Postives = 48/105 (45.71%), Query Frame = 0 Query: 186 ATFGKHVGIHFEGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRR 290 A F V G P +AC N+ G L I+ RG C F K + Q +GF+A IV DN D + + G + IKI +F++K+ + +++ Sbjct: 41 ADFSPSVTTVETGVVYVAEPLNACRNLRNKPEQSPYGTSPLVLII-RGGCSFEYKVRNAQRSGFKAAIVYDNVDRNFLSAMGGDSDGIKIQAVFVMKRAGEMLKK 144
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1040285161|gb|OBS79999.1| (hypothetical protein A6R68_21799, partial [Neotoma lepida]) HSP 1 Score: 65.0846 bits (157), Expect = 1.504e-7 Identity = 53/182 (29.12%), Postives = 83/182 (45.60%), Query Frame = 0 Query: 178 RSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED-SRLFTPFEHNPDPTPHRGDHLQNPTVIHFNKFRTKYPLTVQNDP 348 R VL PA FG + H E G + P++ C+ ++ P + M + A+++RG C FAEKA+ +Q+AG IV+D+ + S G+D + IKIP++FL KE I + +++ V D +R P N D P + QN + L Q+ P Sbjct: 245 RVVLTAGPAQFGLDLSKHKETRGFVASSKPYNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREHEEVEVLLSDKARDRDPEMENED-QPSSENDSQNQSSEQILSLSQTVDLADQDTP 420
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|914559172|gb|KOB66969.1| (alpha-1,2-Mannosidase [Operophtera brumata]) HSP 1 Score: 64.6994 bits (156), Expect = 1.555e-7 Identity = 42/115 (36.52%), Postives = 59/115 (51.30%), Query Frame = 0 Query: 180 VLQGIPATFGKHV--GIHFEGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRIT-------GRDESIKIPVIFLLKKES 285 VL PA FGK + + F G+ P+ AC P++ EQ + F I ERG C FA+K + +Q AG + IVLDN + S + G+D+ I IP +FL +ES Sbjct: 245 VLHAGPAHFGKELTGNVRFIGELAIVRPYDACT----PVANGEQ-VKGKFGIAERGKCTFAQKVRNMQAAGVELAIVLDNIEDSSHENTAIFAMSGDGKDD-ITIPAVFLFSRES 353
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1195669362|ref|XP_021020499.1| (ER degradation-enhancing alpha-mannosidase-like protein 3 [Mus caroli]) HSP 1 Score: 65.4698 bits (158), Expect = 1.575e-7 Identity = 56/195 (28.72%), Postives = 85/195 (43.59%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED-SRLFTPFEHNPDPTPHRGDHLQNPTVIHFNKFRTKYPLTVQNDPRAEQTVGVEFSP 360 R VL PA FG + H E G + P++ C+ ++ P + M + A+++RG C FAEKA+ +Q+AG IV+D+ + S G+D + IKIP++FL KE I + +++ V D +R P N D P + QN + L Q P E SP Sbjct: 682 GRVVLTAGPAQFGLDLSKHKETRGFVASSKPYNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREHEQVEVLLSDKARDRDPEMENED-QPSSENDSQNQSAEQMLSLSQTVDLADQESPENPPDSHSEASP 870
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1062909689|ref|XP_017916206.1| (PREDICTED: ER degradation-enhancing alpha-mannosidase-like protein 3 isoform X6 [Capra hircus]) HSP 1 Score: 65.0846 bits (157), Expect = 1.826e-7 Identity = 49/161 (30.43%), Postives = 77/161 (47.83%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKES----DKIRR------MLLLQKKLRVAFEDSRLFTPFEHNPDP 317 R VL PA FG + H E G + P++ C+ ++ P + M + A+++RG C FAEKA+ +Q+AG IV+D+ + S G+D + IKIP++FL KE D IR +L + K R A ++ + N +P Sbjct: 641 GRVVLTAGPAQFGPDLSKHKETRGFVASSKPYNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREYEEVEVLLSDKAKDRAAILKGKMIPSYIINSNP 796
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1062909685|ref|XP_017916205.1| (PREDICTED: ER degradation-enhancing alpha-mannosidase-like protein 3 isoform X5 [Capra hircus]) HSP 1 Score: 65.0846 bits (157), Expect = 1.925e-7 Identity = 49/161 (30.43%), Postives = 77/161 (47.83%), Query Frame = 0 Query: 177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKES----DKIRR------MLLLQKKLRVAFEDSRLFTPFEHNPDP 317 R VL PA FG + H E G + P++ C+ ++ P + M + A+++RG C FAEKA+ +Q+AG IV+D+ + S G+D + IKIP++FL KE D IR +L + K R A ++ + N +P Sbjct: 642 GRVVLTAGPAQFGPDLSKHKETRGFVASSKPYNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREYEEVEVLLSDKAKDRAAILKGKMIPSYIINSNP 797 The following BLAST results are available for this feature:
BLAST of Hypothetical protein CBG01951 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 5
BLAST of Hypothetical protein CBG01951 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold723_size106546:101481..103119- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold723_size106546-snap-gene-0.22 ID=maker-scaffold723_size106546-snap-gene-0.22|Name=Hypothetical protein CBG01951|organism=Tigriopus kingsejongensis|type=gene|length=1639bp|location=Sequence derived from alignment at scaffold723_size106546:101481..103119- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'Hypothetical protein CBG01951' has the following synonyms
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