Hypothetical protein CBG01951, maker-scaffold723_size106546-snap-gene-0.22 (gene) Tigriopus kingsejongensis

Overview
NameHypothetical protein CBG01951
Unique Namemaker-scaffold723_size106546-snap-gene-0.22
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of Hypothetical protein CBG01951 vs. L. salmonis genes
Match: EMLSAG00000007844 (supercontig:LSalAtl2s:LSalAtl2s45:859513:867489:1 gene:EMLSAG00000007844 transcript:EMLSAT00000007844 description:"maker-LSalAtl2s45-snap-gene-8.66")

HSP 1 Score: 59.3066 bits (142), Expect = 1.478e-9
Identity = 36/113 (31.86%), Postives = 56/113 (49.56%), Query Frame = 0
Query:  185 PATFGKHV--GIHFEGQAIETVPWHACNNVSLPISPMEQG--FQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHS--------GFKRITGRDESIKIPVIFLLKKES 285
            PA FGK +  G   +G+A+   P+ AC +       +E G  F     IVERG+C F EKA+ ++  G    IV+D  D S        G     G+ + + IP++FL  +++
Sbjct:  647 PAQFGKELSNGYKAKGKAVVASPYKACGD-------LENGKEFWGKIGIVERGDCMFIEKARLLESLGAVGGIVIDANDGSTSKASPLFGMTGDKGKSDDVSIPLVFLFNEDA 752          
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|122230870|sp|Q10R93.1|RMR1_ORYSJ (RecName: Full=Receptor homology region, transmembrane domain- and RING domain-containing protein 1; Short=OsRMR1; Flags: Precursor)

HSP 1 Score: 65.855 bits (159), Expect = 2.667e-10
Identity = 37/108 (34.26%), Postives = 54/108 (50.00%), Query Frame = 0
Query:  184 IPATFGKHV-GIHFEGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRR 290
            + A+F   V G  FEG      P  AC+ ++   S  E+G    FA++ RG C F EK K  QDAGF+A IV DN +      + G    I I  +F+ K   + +++
Sbjct:   42 VEASFAPGVKGSGFEGVVYTAEPLDACSPLT---SKAEKGPPSPFALIIRGGCTFDEKVKNAQDAGFKAAIVYDNENSGVLISMAGSSGGIHIYAVFISKASGEVLKK 146          
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|224471825|sp|Q2HXL6.2|EDEM3_MOUSE (RecName: Full=ER degradation-enhancing alpha-mannosidase-like protein 3; AltName: Full=Alpha-1,2-mannosidase EDEM3; Flags: Precursor)

HSP 1 Score: 64.6994 bits (156), Expect = 8.215e-10
Identity = 43/138 (31.16%), Postives = 69/138 (50.00%), Query Frame = 0
Query:  177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED 304
             R VL   PA FG  +  H E  G    + P++ C+ ++ P + M +      A+++RG C FAEKA+ +Q+AG    IV+D+ + S             G+D + IKIP++FL  KE   I   +   +++ V   D
Sbjct:  660 GRVVLTAGPAQFGLDLSKHKETRGFVASSKPYNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREHEQVEVLLSD 792          
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|166897965|sp|Q9BZQ6.2|EDEM3_HUMAN (RecName: Full=ER degradation-enhancing alpha-mannosidase-like protein 3; AltName: Full=Alpha-1,2-mannosidase EDEM3; Flags: Precursor)

HSP 1 Score: 62.003 bits (149), Expect = 5.687e-9
Identity = 43/138 (31.16%), Postives = 68/138 (49.28%), Query Frame = 0
Query:  177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED 304
             R VL   PA FG  +  H E  G    + P + C+ ++ P + M +      A+++RG C FAEKA+ +Q+AG    IV+D+ + S             G+D + IKIP++FL  KE   I   +   +++ V   D
Sbjct:  659 GRVVLTAGPAQFGLDLSKHKETRGFVASSKPSNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREYEEVEVLLSD 791          
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|224487992|sp|Q6GQB9.2|EDEM3_XENLA (RecName: Full=ER degradation-enhancing alpha-mannosidase-like protein 3; AltName: Full=Alpha-1,2-mannosidase EDEM3; Flags: Precursor)

HSP 1 Score: 60.4622 bits (145), Expect = 1.781e-8
Identity = 41/139 (29.50%), Postives = 66/139 (47.48%), Query Frame = 0
Query:  177 SRSVLQGIPATFGKHVGIHF---EGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSG-----FKRITGRDES---IKIPVIFLLKKESDKIRRMLLLQKKLRVAFED 304
             R VL   PA FG  +  H    +G      P+  C++++       Q  Q   A+++RG C FAEKA+ VQ AG    IV+D+ + S        ++ G  +S   + IP++FL  KE + I   +   +++ V   D
Sbjct:  645 GRVVLTAGPAQFGMDLSKHLAGAQGLVARAEPYSGCSDIT-----NGQAIQGKIALMQRGQCMFAEKARNVQKAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKSTDDVTIPMLFLFSKEGNIILDAIREYQQVEVLLSD 778          
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Match: gi|576017832|sp|F4I2Y3.1|RMR3_ARATH (RecName: Full=Receptor homology region, transmembrane domain- and RING domain-containing protein 3; Short=AtRMR3; Flags: Precursor)

HSP 1 Score: 54.299 bits (129), Expect = 9.147e-7
Identity = 31/105 (29.52%), Postives = 48/105 (45.71%), Query Frame = 0
Query:  186 ATFGKHVGIHFEGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRITGRDESIKIPVIFLLKKESDKIRR 290
            A F   V     G      P +AC N+         G   L  I+ RG C F  K +  Q +GF+A IV DN D +    + G  + IKI  +F++K+  + +++
Sbjct:   41 ADFSPSVTTVETGVVYVAEPLNACRNLRNKPEQSPYGTSPLVLII-RGGCSFEYKVRNAQRSGFKAAIVYDNVDRNFLSAMGGDSDGIKIQAVFVMKRAGEMLKK 144          
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1040285161|gb|OBS79999.1| (hypothetical protein A6R68_21799, partial [Neotoma lepida])

HSP 1 Score: 65.0846 bits (157), Expect = 1.504e-7
Identity = 53/182 (29.12%), Postives = 83/182 (45.60%), Query Frame = 0
Query:  178 RSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED-SRLFTPFEHNPDPTPHRGDHLQNPTVIHFNKFRTKYPLTVQNDP 348
            R VL   PA FG  +  H E  G    + P++ C+ ++ P + M +      A+++RG C FAEKA+ +Q+AG    IV+D+ + S             G+D + IKIP++FL  KE   I   +   +++ V   D +R   P   N D  P   +  QN +            L  Q+ P
Sbjct:  245 RVVLTAGPAQFGLDLSKHKETRGFVASSKPYNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREHEEVEVLLSDKARDRDPEMENED-QPSSENDSQNQSSEQILSLSQTVDLADQDTP 420          
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|914559172|gb|KOB66969.1| (alpha-1,2-Mannosidase [Operophtera brumata])

HSP 1 Score: 64.6994 bits (156), Expect = 1.555e-7
Identity = 42/115 (36.52%), Postives = 59/115 (51.30%), Query Frame = 0
Query:  180 VLQGIPATFGKHV--GIHFEGQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRIT-------GRDESIKIPVIFLLKKES 285
            VL   PA FGK +   + F G+     P+ AC     P++  EQ  +  F I ERG C FA+K + +Q AG +  IVLDN + S  +          G+D+ I IP +FL  +ES
Sbjct:  245 VLHAGPAHFGKELTGNVRFIGELAIVRPYDACT----PVANGEQ-VKGKFGIAERGKCTFAQKVRNMQAAGVELAIVLDNIEDSSHENTAIFAMSGDGKDD-ITIPAVFLFSRES 353          
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1195669362|ref|XP_021020499.1| (ER degradation-enhancing alpha-mannosidase-like protein 3 [Mus caroli])

HSP 1 Score: 65.4698 bits (158), Expect = 1.575e-7
Identity = 56/195 (28.72%), Postives = 85/195 (43.59%), Query Frame = 0
Query:  177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKESDKIRRMLLLQKKLRVAFED-SRLFTPFEHNPDPTPHRGDHLQNPTVIHFNKFRTKYPLTVQNDPRAEQTVGVEFSP 360
             R VL   PA FG  +  H E  G    + P++ C+ ++ P + M +      A+++RG C FAEKA+ +Q+AG    IV+D+ + S             G+D + IKIP++FL  KE   I   +   +++ V   D +R   P   N D  P   +  QN +            L  Q  P        E SP
Sbjct:  682 GRVVLTAGPAQFGLDLSKHKETRGFVASSKPYNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREHEQVEVLLSDKARDRDPEMENED-QPSSENDSQNQSAEQMLSLSQTVDLADQESPENPPDSHSEASP 870          
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1062909689|ref|XP_017916206.1| (PREDICTED: ER degradation-enhancing alpha-mannosidase-like protein 3 isoform X6 [Capra hircus])

HSP 1 Score: 65.0846 bits (157), Expect = 1.826e-7
Identity = 49/161 (30.43%), Postives = 77/161 (47.83%), Query Frame = 0
Query:  177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKES----DKIRR------MLLLQKKLRVAFEDSRLFTPFEHNPDP 317
             R VL   PA FG  +  H E  G    + P++ C+ ++ P + M +      A+++RG C FAEKA+ +Q+AG    IV+D+ + S             G+D + IKIP++FL  KE     D IR       +L  + K R A    ++   +  N +P
Sbjct:  641 GRVVLTAGPAQFGPDLSKHKETRGFVASSKPYNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREYEEVEVLLSDKAKDRAAILKGKMIPSYIINSNP 796          
BLAST of Hypothetical protein CBG01951 vs. nr
Match: gi|1062909685|ref|XP_017916205.1| (PREDICTED: ER degradation-enhancing alpha-mannosidase-like protein 3 isoform X5 [Capra hircus])

HSP 1 Score: 65.0846 bits (157), Expect = 1.925e-7
Identity = 49/161 (30.43%), Postives = 77/161 (47.83%), Query Frame = 0
Query:  177 SRSVLQGIPATFGKHVGIHFE--GQAIETVPWHACNNVSLPISPMEQGFQRLFAIVERGNCKFAEKAKRVQDAGFQALIVLDNRDHSGFKRI-------TGRD-ESIKIPVIFLLKKES----DKIRR------MLLLQKKLRVAFEDSRLFTPFEHNPDP 317
             R VL   PA FG  +  H E  G    + P++ C+ ++ P + M +      A+++RG C FAEKA+ +Q+AG    IV+D+ + S             G+D + IKIP++FL  KE     D IR       +L  + K R A    ++   +  N +P
Sbjct:  642 GRVVLTAGPAQFGPDLSKHKETRGFVASSKPYNGCSELTNPEAVMGK-----IALIQRGQCMFAEKARNIQNAGAIGGIVIDDNEGSSSDTAPLFQMAGDGKDTDDIKIPMLFLFSKEGSIILDAIREYEEVEVLLSDKAKDRAAILKGKMIPSYIINSNP 797          
The following BLAST results are available for this feature:
BLAST of Hypothetical protein CBG01951 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000078441.478e-931.86supercontig:LSalAtl2s:LSalAtl2s45:859513:867489:1 ... [more]
back to top
BLAST of Hypothetical protein CBG01951 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
gi|122230870|sp|Q10R93.1|RMR1_ORYSJ2.667e-1034.26RecName: Full=Receptor homology region, transmembr... [more]
gi|224471825|sp|Q2HXL6.2|EDEM3_MOUSE8.215e-1031.16RecName: Full=ER degradation-enhancing alpha-manno... [more]
gi|166897965|sp|Q9BZQ6.2|EDEM3_HUMAN5.687e-931.16RecName: Full=ER degradation-enhancing alpha-manno... [more]
gi|224487992|sp|Q6GQB9.2|EDEM3_XENLA1.781e-829.50RecName: Full=ER degradation-enhancing alpha-manno... [more]
gi|576017832|sp|F4I2Y3.1|RMR3_ARATH9.147e-729.52RecName: Full=Receptor homology region, transmembr... [more]
back to top
BLAST of Hypothetical protein CBG01951 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1040285161|gb|OBS79999.1|1.504e-729.12hypothetical protein A6R68_21799, partial [Neotoma... [more]
gi|914559172|gb|KOB66969.1|1.555e-736.52alpha-1,2-Mannosidase [Operophtera brumata][more]
gi|1195669362|ref|XP_021020499.1|1.575e-728.72ER degradation-enhancing alpha-mannosidase-like pr... [more]
gi|1062909689|ref|XP_017916206.1|1.826e-730.43PREDICTED: ER degradation-enhancing alpha-mannosid... [more]
gi|1062909685|ref|XP_017916205.1|1.925e-730.43PREDICTED: ER degradation-enhancing alpha-mannosid... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold723_size106546supercontigscaffold723_size106546:101481..103119 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold723_size106546-snap-gene-0.22-mRNA-1maker-scaffold723_size106546-snap-gene-0.22-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold723_size106546:101481..103119-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold723_size106546-snap-gene-0.22 ID=maker-scaffold723_size106546-snap-gene-0.22|Name=Hypothetical protein CBG01951|organism=Tigriopus kingsejongensis|type=gene|length=1639bp|location=Sequence derived from alignment at scaffold723_size106546:101481..103119- (Tigriopus kingsejongensis)
ATGTTCGTTTTGAAGAATTCCGTCGTTGCTCATCTGCAATGCATTCATAC TTTGGAAACTTCTCAGAGTGAACAAATCTGCACTTGTCCCTCTCAGTTCA CTCTGCACGAAGATGAATGCGTTCCTTGCAAAGAAGACGCCACAGCCTAC TTAGGGTTTAACCTCTTGGATGAGCCAATATTGGTAGAAACTGAGGCAGA TTGTGCCCTAAAGTGTTCTGAACATCAGCAGTGCTTGTTTTGGAGTTTAG ACACTCAAAATGGACGCTGTTACCTGAAGTATTCGAGGGATAAAAATGCG AAGTTGTGGCATTCCTATGTGTCTGGAGTTGACAACTGTGCTGGACACAG TGCTCAACAAGGGCGCATACTTATTCCCCGGGATTTGTCTGAATATACCC TAGAATTTGAAAGCAAGGGTAAGTTCGAAACTTTGCTTTTTAACAGCGAT TACTTTCTTTTAAAAATTAAAACCTCCATCTCGAAATTTCCTTTTAGGGT TGGATCCACATTCTGTAAGGTTTCCCGAATCCGAAAACCATCGGCACCAG CCAGCAAGTAGAGAGAGTTCATCTTCTCCACTTCTTTATGTTTACTTGAG CGGCCAATCGAGGTCCGTCCTTCAGGGCATCCCAGCCACCTTTGGCAAGC ACGTGGGCATCCACTTCGAGGGACAAGCTATCGAAACAGTTCCCTGGCAT GCTTGCAACAATGTATCTTTGCCCATTTCCCCAATGGAGCAAGGCTTTCA GCGTCTATTTGCAATTGTTGAAAGGGGAAATTGTAAATTTGCTGAGAAGG CCAAGCGTGTACAAGATGCTGGCTTTCAAGGTGAGCAAGGAGCCAGTCTC ATTTATAATGAATAATTACCGTAGAACATTTTTTATTTTCAGCACTTATT GTTCTTGATAACCGAGATCATAGTGGGTTCAAAAGAATAACAGGACGTGA TGAATCAATAAAAATACCTGTGATATTTCTGCTGAAGAAGGAATCTGACA AAATTCGTCGGATGTTGCTCCTTCAGAAAAAACTCCGAGTTGCATTTGAA GGTGATTTCGGAAAAGTCGATGCCAAAAGTAACATCATTCAGTAACAAAA ATCAATTTAGATTCCAGATTATTTACACCATTTGAACACAATCCGGATCC AACTCCACATCGAGGTGATCACTTGCAGAATCCCACTGTCATCCATTTTA ACAAGTTCAGGACCAAGTATCCACTTACTGTGCAAAATGACCCACGAGCT GAGCAAACGGTGGGAGTAGAGTTTTCTCCAATAATGGTAGCCGTTATTGT GGTCATTATCATTCTGATTATCCTCGTGATCATCACGCTCTTCGTCTATA TCAAGCATTGGTGAGTAAAAGGGGATCAGGAAAATTCAAGAAGATGCATT TGAAAGCTTCCTAATTTGTCTGCGCCTTTTTAAGTGCCTCTCAAAATCGG TTGCGTCGGCAGAGACGAAATCGTTGTCAGGATGCTGTAAGGGATATGGA AGCCCACTACAAGAGTCAACTCGGCAAATTCTACCCGGAGGAGATCAACG GTTCCCGTTCACATGATCAGTCGGATGATTTGGATTCTCATCAAACAACA AAGTTGCTCGAATGCCCAGTGTGTTTAGAGGTTGCATGG
back to top
Synonyms
The feature 'Hypothetical protein CBG01951' has the following synonyms
Synonym
Tk01427
Add to Basket