probable nuclear hormone receptor hr38-like, maker-scaffold743_size103610-snap-gene-0.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23") HSP 1 Score: 103.219 bits (256), Expect = 3.430e-24 Identity = 53/122 (43.44%), Postives = 65/122 (53.28%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSP----QEQPPSPPVSLITALVRAHIDTSPDSSP 148 C VCGD ++ HYGV TCEGCKGFF+R+ Y C KNC VD+ RNRCQFCR QKCLA+GM ++ GR + P S Q+QP S +S + D SP Sbjct: 47 CKVCGDKSSGVHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDGGGALXPSGRSSHNGNSPDSSCFDTQQQPSSTDMSYEGGGATSGFSYGSDLSP 168
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8") HSP 1 Score: 102.449 bits (254), Expect = 5.879e-24 Identity = 40/66 (60.61%), Postives = 50/66 (75.76%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGM 96 C VCGD A+ +HYG +CEGCKGFFKR+++K Y C +K+C V K RNRCQ+CR QKCLA+GM Sbjct: 220 CVVCGDRASGRHYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGM 285
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7") HSP 1 Score: 99.7525 bits (247), Expect = 5.637e-23 Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 0 Query: 23 DLKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPS 115 D + C VCGD ++ +HYG TCEGCK FFKR+V++ Y C ++CP+D+ RN+CQ CR +KC+ +GM KE V +RGR+P+ Sbjct: 426 DENGQDISCVVCGDKSSGKHYGQFTCEGCKSFFKRSVRRALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGMRKEAV-------QRGRIPA 511 HSP 2 Score: 53.5286 bits (127), Expect = 6.323e-8 Identity = 52/200 (26.00%), Postives = 89/200 (44.50%), Query Frame = 0 Query: 184 LLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALR-----LAYRIQPDSDQFTFCHGLVLHRNQCQH----SFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTL-VTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 LL S+IE R IPG ++ +D+ L + ELF L + I P LH N +F D + E L + +D ++C+ A+ L TD GLS+ +E LQ K +L+D+ + Q + F ++L RL LR++S ++++F++++ P+ +I M + F Sbjct: 595 LLFSAIEWARN----IPGFPELPVTDQVALLRLVWSELFVLNASQCNMPLHIAP------LLAAAGLHANPMPADKVVAFMDQIRIFQEQVEKLKGLHVDPAEYSCMKAVVLFTTDACGLSESNMIEQLQEKSQCALEDYCRNHYPNQPSR--FGKLLLRLPSLRTVSSGVIEQLFFVRLVGKTPIETLIRDMILTGSNF 782 HSP 3 Score: 51.2174 bits (121), Expect = 3.345e-7 Identity = 51/201 (25.37%), Postives = 90/201 (44.78%), Query Frame = 0 Query: 184 LLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALR-----LAYRIQPDSDQFTFCHGLVLHRNQCQH----SFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTL-VTDRHGLSDPKRVENLQSKVINSLKDHV-TYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 LL S+IE R IPG D+ +D+ L + ELF L + I P LH + ++ D + E L ++ +D ++C+ A+ L TD GL+D +E LQ K +L+++ T P+ + F R+L R LR++S ++++F++++ P+ +I M + F Sbjct: 167 LLFSAIEWARN----IPGFPDLPITDQVALLRLVWSELFVLNASQCNMPIHIAP------LLAAAGLHASPMAADRVVAYMDHIRIFXEQVEKLKSIHVDSAEYSCMKAIVLFTTDAPGLTDVSVIEQLQEKSQCALEEYCRTQYPNQPTR---FGRLLLRFPSLRTVSSTVIEQLFFIRLVGKTPIDNLIRDMLLTGSSF 354
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000007894 (supercontig:LSalAtl2s:LSalAtl2s466:351370:353021:1 gene:EMLSAG00000007894 transcript:EMLSAT00000007894 description:"maker-LSalAtl2s466-augustus-gene-2.7") HSP 1 Score: 86.2705 bits (212), Expect = 8.409e-19 Identity = 35/76 (46.05%), Postives = 55/76 (72.37%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLA--DKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTD 104 C VC D+++ +HYG+ C+GC GFFKR++++N YVC A + +C VDK RN+C+ CR ++C+ VGM K+ V+ + Sbjct: 34 CKVCTDHSSGKHYGIFACDGCAGFFKRSIRRNRLYVCKAKSEGSCLVDKTHRNQCRACRLKRCVDVGMNKDAVQHE 109
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000007741 (supercontig:LSalAtl2s:LSalAtl2s450:172104:174744:-1 gene:EMLSAG00000007741 transcript:EMLSAT00000007741 description:"maker-LSalAtl2s450-snap-gene-2.9") HSP 1 Score: 83.1889 bits (204), Expect = 1.302e-17 Identity = 35/89 (39.33%), Postives = 54/89 (60.67%), Query Frame = 0 Query: 20 ASGDLKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKN----CPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTD 104 +GD + + C VCGD ++ +HYG+ +C+GC GFFKR++ + Y C A CP+DK RN+C+ CR +KC M K+ V+ + Sbjct: 98 GTGD-RLLDIPCKVCGDRSSGKHYGIYSCDGCSGFFKRSIHRQRIYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDCSMNKDAVQHE 185
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 77.411 bits (189), Expect = 8.731e-16 Identity = 36/88 (40.91%), Postives = 48/88 (54.55%), Query Frame = 0 Query: 25 KATSLLCAVCGDNAACQ-HYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRG 111 K T ++C VCGD A HYG C C+ FF+R+V K+ Y C D+ C + R CQFCR++KCL GM V ++ K R Sbjct: 85 KMTEMVCNVCGDKAPDHIHYGGIACFSCRAFFRRSVPKHTTYFCSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEEEKSSRN 172
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3") HSP 1 Score: 75.0998 bits (183), Expect = 5.151e-15 Identity = 33/67 (49.25%), Postives = 38/67 (56.72%), Query Frame = 0 Query: 31 CAVCGDNAACQ-HYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGM 96 C +C D A HYG C C+ FF+R V NA+Y C DK C + K R CQFCRF KCL GM Sbjct: 63 CHICSDTANDHIHYGAIACXSCRAFFRRAVICNAEYHCSRDKTCFITKETRKHCQFCRFNKCLEAGM 129
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000003771 (supercontig:LSalAtl2s:LSalAtl2s2039:3647:12796:1 gene:EMLSAG00000003771 transcript:EMLSAT00000003771 description:"maker-LSalAtl2s2039-snap-gene-0.4") HSP 1 Score: 72.7886 bits (177), Expect = 2.917e-14 Identity = 73/307 (23.78%), Postives = 136/307 (44.30%), Query Frame = 0 Query: 52 KGFFKRTVQKNAKYV-CLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGR-RGRLPSKPRSPQEQPPSPPV--------SLITALVRAHIDTSPDSSPNSLD--FSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGD---WLGSIMEFSRTLHAMDLDIQAFACLCALTLVT-DRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSV 342 +GFF+R++Q+ +Y C ++ C + + RNRCQ+CR +KC+A GM ++ VR + R + ++ S +S + + V +I +VRAH D D + N ++ ++ E V T G+V TK F + N+I L+ +C+ L ++ P ++ Q + G+ + S+ E ++ L+ +L C++ ++T DR GL +P+ V+ +Q+K+ N L + + P FS +L + LR+L+ Sbjct: 17 QGFFRRSIQQKIQYRPCTKNQQCNIQRINRNRCQYCRLKKCIASGMSRDAVRFGRVPKREKAKIFSAMQSSRMKTQEANVLSEMSDDXKIIEEIVRAHYDNX-DYTKNKMEPFLAKAKENPVYVPCT--GMVSQGMTKGGIFKN-------------------NNIFHRHLPSLYNVSCVYL-KVQTNNFFSPLQSLVCLNGDIIRKETINQLAAGNAKFLMDSVFELAQRLNQFNLSDAEIGIFCSVVIITPDRPGLRNPELVQKIQNKLKNILNNILI--PQHSDSPGIFSELLSMVHDLRTLNT 298
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000005620 (supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1 gene:EMLSAG00000005620 transcript:EMLSAT00000005620 description:"maker-LSalAtl2s301-augustus-gene-5.4") HSP 1 Score: 69.707 bits (169), Expect = 3.072e-14 Identity = 38/84 (45.24%), Postives = 48/84 (57.14%), Query Frame = 0 Query: 30 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQK---NAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRR 110 +C VC + AA H+G TCEGCK FF RT K N+ C + +C +DK+ R C+ CR +KCL VGM K R GRR Sbjct: 37 ICRVCDEPAAGYHFGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCKACRLRKCLRVGMSKAGSRY----GRR 116
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7") HSP 1 Score: 71.633 bits (174), Expect = 6.072e-14 Identity = 37/82 (45.12%), Postives = 45/82 (54.88%), Query Frame = 0 Query: 30 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKY-VCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRR 110 LC VC + AA H+G TCEGCK FF RT + C + C VDK+ R C+ CR +KC+ VGM K R GRR Sbjct: 56 LCRVCEEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCVVDKKNRTACKACRLRKCIMVGMSKSGSRY----GRR 133
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|172044159|sp|A4IIG7.1|NR4A2_XENTR (RecName: Full=Nuclear receptor subfamily 4 group A member 2) HSP 1 Score: 426.402 bits (1095), Expect = 4.895e-145 Identity = 210/345 (60.87%), Postives = 267/345 (77.39%), Query Frame = 0 Query: 30 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLIT-ALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLA+KNCPVDKRRRNRCQ+CRFQKCL VGMVKEVVRTDSLKGRRGRLPSKP+SPQE P P + ALVRAH+D++P S SLD+S++ ++ ++ IQQFY LLT S+E+IR + ++IPG +++ D++LLF+SA LELF LRLAYR P + FC+G+VL+R QC FG+W+ SI++FS LH+M++DI AF+C+ AL ++T+RHGL +PKRVE LQ+K++N LKDHVT+N + Y S++L +L LR+L QGLQRIFYLK+ED VP PA+I+K+F ++PF Sbjct: 255 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISALVRAHVDSNPAVS--SLDYSRFQANPEYQMNG------DDTQHIQQFYDLLTGSMEIIRGWAEKIPGFSELHKQDQDLLFESAFLELFVLRLAYRSNPAEGKLIFCNGVVLNRLQCVRGFGEWIDSIVDFSSNLHSMNIDISAFSCIAALAVITERHGLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYLSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF 591
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|75061669|sp|Q5R5Y4.1|NR4A2_PONAB (RecName: Full=Nuclear receptor subfamily 4 group A member 2) HSP 1 Score: 425.246 bits (1092), Expect = 2.006e-144 Identity = 212/345 (61.45%), Postives = 265/345 (76.81%), Query Frame = 0 Query: 30 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLIT-ALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLA+KNCPVDKRRRNRCQ+CRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE P P + ALVRAH+D++P + SLD+S++ ++ ++ IQQFY LLT S+E+IR + ++IPG D+ +D++LLF+SA LELF LRLAYR P + FC+G+VLHR QC FG+W+ SI+EFS L M++DI AF+C+ AL +VT+RH L +PKRVE LQ+K++N LKDHVT+N + Y S++L +L LR+L QGLQRIFYLK+ED VP PA+I+K+F ++PF Sbjct: 262 LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQEPSPPSPPVSLISALVRAHVDSNPAMT--SLDYSRFQANPDYQMSG------DDTQHIQQFYDLLTGSMEIIRGWAEKIPGFADLPKADQDLLFESAFLELFVLRLAYRSNPVEGKLIFCNGVVLHRLQCVRGFGEWIDSIVEFSSNLQNMNIDISAFSCIAALAMVTERHWLKEPKRVEELQNKIVNCLKDHVTFNNGGLNRPNYLSKLLGKLPELRTLCTQGLQRIFYLKLEDLVPPPAIIDKLFLDTLPF 598
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|128911|sp|P12813.1|NR4A1_MOUSE (RecName: Full=Nuclear receptor subfamily 4 group A member 1; AltName: Full=Nuclear hormone receptor NUR/77; AltName: Full=Nuclear protein N10; AltName: Full=Orphan nuclear receptor HMR) HSP 1 Score: 419.083 bits (1076), Expect = 5.463e-142 Identity = 201/358 (56.15%), Postives = 266/358 (74.30%), Query Frame = 0 Query: 16 TRSPASGDLKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 +RS ASG + CAVCGDNA+CQHYGVRTCEGCKGFFKRTVQK+AKY+CLA+K+CPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+ P P + P +L+T+L+RAH+D+ P ++ LD+S++ E + ++ A +QQFY LL+ S++VIRK+ ++IPG ++ D++LL +SA LELF LRLAYR +P + FC GLVLH+ QC FGDW+ +I+ FSR+LH++ +D+ AFACL AL L+TDRHGL DP+RVE LQ+++ + LK+H+ + SR+L +L LR+L QGLQRIF LK+ED VP P +++K+F ++ F Sbjct: 258 SRSGASGGSEGR---CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKSAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKQP---PDASPTNLLTSLIRAHLDSGPSTA--KLDYSKFQELVLPRFGKED------AGDVQQFYDLLSGSLDVIRKWAEKIPGFIELCPGDQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHQLQCARGFGDWIDNILAFSRSLHSLGVDVPAFACLSALVLITDRHGLQDPRRVEELQNRIASCLKEHMATVAGDPQPASCLSRLLGKLPELRTLCTQGLQRIFCLKLEDLVPPPPIVDKIFMDTLSF 601
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|1709263|sp|P22829.2|NR4A1_RAT (RecName: Full=Nuclear receptor subfamily 4 group A member 1; AltName: Full=NUR77; AltName: Full=Nerve growth factor-induced protein I-B; Short=NGFI-B; AltName: Full=Orphan nuclear receptor HMR) HSP 1 Score: 418.698 bits (1075), Expect = 5.566e-142 Identity = 197/343 (57.43%), Postives = 260/343 (75.80%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 CAVCGDNA+CQHYGVRTCEGCKGFFKRTVQK+AKY+CLA+K+CPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+ P P + P +L+T+L+RAH+D+ P+++ LD+S++ E + ++ A +QQFY LL+ S++VIRK+ ++IPG ++ D++LL +SA LELF LRLAYR +P + FC GLVLHR QC FGDW+ +I+ FSR+LH++ +D+ AFACL AL L+TDRHGL DP+RVE LQ+++ + LK+H+ + SR+L +L LR+L QGLQRIF LK+ED VP P +++K+F ++ F Sbjct: 266 CAVCGDNASCQHYGVRTCEGCKGFFKRTVQKSAKYICLANKDCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKQP---PDASPTNLLTSLIRAHLDSGPNTA--KLDYSKFQELVLPRFGKED------AGDVQQFYDLLSGSLDVIRKWAEKIPGFIELSPGDQDLLLESAFLELFILRLAYRSKPGEGKLIFCSGLVLHRLQCARGFGDWIDNILAFSRSLHSLGVDVPAFACLSALVLITDRHGLQDPRRVEELQNRIASCLKEHMAAVAGDPQPASCLSRLLGKLPELRTLCTQGLQRIFCLKLEDLVPPPPIVDKIFMDTLSF 597
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|46577133|sp|Q9QZB6.1|NR4A3_MOUSE (RecName: Full=Nuclear receptor subfamily 4 group A member 3; AltName: Full=Orphan nuclear receptor TEC; AltName: Full=Translocated in extraskeletal chondrosarcoma) HSP 1 Score: 405.216 bits (1040), Expect = 2.851e-136 Identity = 209/353 (59.21%), Postives = 258/353 (73.09%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSP------QEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFS----RILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLA+KNCPVDKRRRNRCQ+CRFQKCL+VGMVKEVVRTDSLKGRRGRLPSKP+SP Q PPSPP+ ++ ALVRA D++P LD+S+Y T + +A +QQFY+LLT+SI+V R + ++IPG D+ D+ LL +SA LELF LRL+ R D+F FC+GLVLHR QC FG+WL SI +FS L +++LDIQA ACL AL+++T+RHGL +PKRVE L +K+ +SLKDH Q+K Q ++L L LR + QGLQRIFYLK+ED VP P+VI+K+F ++PF Sbjct: 293 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPSPPSPPICMMNALVRALT----DATPRDLDYSRY-------CPTDQATAGTDAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNGLVLHRLQCLRGFGEWLDSIKDFSLNLQSLNLDIQALACLSALSMITERHGLKEPKRVEELCTKITSSLKDH-------QRKGQALEPSEPKVLRALVELRKICTQGLQRIFYLKLEDLVPPPSVIDKLFLDTLPF 627
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|90110039|sp|Q92570.3|NR4A3_HUMAN (RecName: Full=Nuclear receptor subfamily 4 group A member 3; AltName: Full=Mitogen-induced nuclear orphan receptor; AltName: Full=Neuron-derived orphan receptor 1; AltName: Full=Nuclear hormone receptor NOR-1) HSP 1 Score: 404.445 bits (1038), Expect = 5.189e-136 Identity = 218/394 (55.33%), Postives = 270/394 (68.53%), Query Frame = 0 Query: 1 LSKMRLPLGPPPPPLTRSPASGDLKATSL---------------LCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSP------QEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 L+K PL PP LT SP + L S CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLA+KNCPVDKRRRNRCQ+CRFQKCL+VGMVKEVVRTDSLKGRRGRLPSKP+SP Q PPSPP+ ++ ALVRA DS+P LD+S+Y T + +A +QQFY+LLT+SI+V R + ++IPG D+ D+ LL +SA LELF LRL+ R D+F FC+GLVLHR QC FG+WL SI +FS L +++LDIQA ACL AL+++T+RHGL +PKRVE L +K+ +SLKDH + Q + S++L L LR + GLQRIFYLK+ED V P++I+K+F ++PF Sbjct: 247 LAKRAAPLAFPPLGLTPSPTASSLLGESPSLPSPPSRSSSSGEGTCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPSPPSPPICMMNALVRALT----DSTPRDLDYSRY-------CPTDQAAAGTDAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNGLVLHRLQCLRGFGEWLDSIKDFSLNLQSLNLDIQALACLSALSMITERHGLKEPKRVEELCNKITSSLKDHQS---KGQALEPTESKVLGALVELRKICTLGLQRIFYLKLEDLVSPPSIIDKLFLDTLPF 626
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|1709332|sp|P51179.1|NR4A3_RAT (RecName: Full=Nuclear receptor subfamily 4 group A member 3; AltName: Full=Neuron-derived orphan receptor 1/2; AltName: Full=Nuclear hormone receptor NOR-1/NOR-2) HSP 1 Score: 401.364 bits (1030), Expect = 8.079e-135 Identity = 208/353 (58.92%), Postives = 257/353 (72.80%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSP------QEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFS----RILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLA+KNCPVDKRRRNRCQ+CRFQKCL+VGMVKEVVRTDSLKGRRGRLPSKP+SP Q PPSPP+ ++ ALVRA D++P LD+S+Y T + +A +QQFY+LLT+SI+V R + ++IPG D+ D+ LL +SA LELF LRL+ R D+F FC+GLVLHR QC FG+WL SI +FS L +++LDIQA ACL AL+++T+RHGL +PKRVE L +K+ +SLKDH Q+K Q ++L L LR + QGLQRIFYLK+ED V P+VI+K+F ++PF Sbjct: 294 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLANKNCPVDKRRRNRCQYCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQPSPPSPPICMMNALVRALT----DATPRDLDYSRY-------CPTDQATAGTDAEHVQQFYNLLTASIDVSRSWAEKIPGFTDLPKEDQTLLIESAFLELFVLRLSIRSNTAEDKFVFCNGLVLHRLQCLRGFGEWLDSIKDFSLNLQSLNLDIQALACLSALSMITERHGLKEPKRVEELCNKITSSLKDH-------QRKGQALEPSEPKVLRALVELRKICTQGLQRIFYLKLEDLVSPPSVIDKLFLDTLPF 628
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|17367843|sp|Q9W6B3.1|RARB_COTJA (RecName: Full=Retinoic acid receptor beta; Short=RAR-beta; AltName: Full=Nuclear receptor subfamily 1 group B member 2) HSP 1 Score: 205.297 bits (521), Expect = 9.753e-61 Identity = 119/343 (34.69%), Postives = 186/343 (54.23%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVR-AHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHS-FGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLV-TDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASS 370 C VC D ++ HYGV CEGCKGFF+R++QKN Y C DKNC ++K RNRCQ+CR QKC VGM KE VR D + ++ + P+K S + + + +T +R AH +T P+ +Y S + + L + + +F L T I I +F R+PG + +D+ L ++ACL++ LR+ R P+ D TF GL L+R Q ++ FG + F+ L +++D L A+ L+ DR L +P +V+ LQ ++ +LK ++ K F +IL ++T LRS+S +G +R+ LKME +P +I++M +S Sbjct: 88 CFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRND--RNKKKKEPTKQESTENYEMTAELDDLTEKIRKAHQET----FPSLCQLGKYTTNSSADHRVRLDLGLWD-----KFSELATKCIIKIVEFAKRLPGFTSLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPMKVDKLQEPLLEALKIYIRKR--RPNKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENS 417
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|3041719|sp|P22448.2|RARB_CHICK (RecName: Full=Retinoic acid receptor beta; Short=RAR-beta; AltName: Full=Nuclear receptor subfamily 1 group B member 2) HSP 1 Score: 204.912 bits (520), Expect = 1.168e-60 Identity = 119/343 (34.69%), Postives = 186/343 (54.23%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVR-AHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHS-FGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLV-TDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASS 370 C VC D ++ HYGV CEGCKGFF+R++QKN Y C DKNC ++K RNRCQ+CR QKC VGM KE VR D + ++ + P+K S + + + +T +R AH +T P+ +Y S + + L + + +F L T I I +F R+PG + +D+ L ++ACL++ LR+ R P+ D TF GL L+R Q ++ FG + F+ L +++D L A+ L+ DR L +P +V+ LQ ++ +LK ++ K F +IL ++T LRS+S +G +R+ LKME +P +I++M +S Sbjct: 88 CFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRND--RNKKKKEPTKQESTENYEMTAELDDLTEKIRKAHQET----FPSLCQLGKYTTNSSADHRVRLDLGLWD-----KFSELATKCIIKIVEFAKRLPGFTSLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPMKVDKLQEPLLEALKIYIRKR--RPNKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENS 417
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Match: gi|133494|sp|P22605.1|RARB_MOUSE (RecName: Full=Retinoic acid receptor beta; Short=RAR-beta; AltName: Full=Nuclear receptor subfamily 1 group B member 2) HSP 1 Score: 203.371 bits (516), Expect = 1.092e-59 Identity = 119/343 (34.69%), Postives = 186/343 (54.23%), Query Frame = 0 Query: 31 CAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVR-AHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHS-FGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLV-TDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASS 370 C VC D ++ HYGV CEGCKGFF+R++QKN Y C DKNC ++K RNRCQ+CR QKC VGM KE VR D + ++ + PSK + + + +T +R AH +T P+ +Y S + + L + + +F L T I I +F R+PG + +D+ L ++ACL++ LR+ R P+ D TF GL L+R Q ++ FG + F+ L +++D L A+ L+ DR L +P +V+ LQ ++ +LK ++ + K F +IL ++T LRS+S +G +R+ LKME +P +I++M +S Sbjct: 115 CFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRDKNCVINKVTRNRCQYCRLQKCFEVGMSKESVRND--RNKKKKEPSKQECTESYEMTAELDDLTEKIRKAHQET----FPSLCQLGKYTTNSSADHRVRLDLGLWD-----KFSELATKCIIKIVEFAKRLPGFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTDLVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRRPS--KPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENS 444
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|657600386|gb|AID52854.1| (hormone receptor 38 [Tigriopus japonicus]) HSP 1 Score: 663.685 bits (1711), Expect = 0.000e+0 Identity = 340/373 (91.15%), Postives = 360/373 (96.51%), Query Frame = 0 Query: 1 LSKMRLPLGPPPPPLTRSPASGDLKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 LSKMRLPLGPPPPPLTRSP GD K+ SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLD+SQY++ASVEELETKEGLV NEA KIQQFYHLLTSSIEVIRKFCDRIPGIN+++ SDRE LFQS CLELF LRLAYRIQPDSDQFTFC+G+VLHRNQCQHSFG+WLG+I+EFSRTLHAM+LDIQAF+CLCALTLV +RHG+SDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRIL+RL+PLRSLSVQGLQRIFYLKMED VPVP +IEK+FASSIPF Sbjct: 218 LSKMRLPLGPPPPPLTRSPG-GDPKSGSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDYSQYVDASVEELETKEGLVANEAAKIQQFYHLLTSSIEVIRKFCDRIPGINELVPSDREHLFQSTCLELFVLRLAYRIQPDSDQFTFCNGMVLHRNQCQHSFGEWLGTIVEFSRTLHAMELDIQAFSCLCALTLVNERHGVSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILDRLSPLRSLSVQGLQRIFYLKMEDQVPVPDLIEKLFASSIPF 589
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1042761287|gb|ANQ45198.1| (hormone receptor 38 [Lepeophtheirus salmonis salmonis]) HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0 Identity = 267/347 (76.95%), Postives = 311/347 (89.63%), Query Frame = 0 Query: 28 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVE-ELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SP E PPSPPVSLITALVRAHIDTSPD N+LD+SQ++E S+E E ++KE ++ NEA KI QFYH+LTSSIEVIR FC+RIPGI+++ +DR+LLFQ++CLELF LRLAYR PDSD++TFC+G+VLH +QC+ +FGDWL I EF+R LH+M+LDI AF+CLC L LV +RHGLSDPK+VE++++K+INSLKDHVTYNP+AQKK+ Y +RIL+RL LRSLS+QGLQRIF+LK ED VP P +IEKMFASSIPF Sbjct: 406 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPTESPPSPPVSLITALVRAHIDTSPDM--NNLDYSQFVETSIEDERDSKENMLANEAIKIGQFYHVLTSSIEVIRNFCERIPGISELSLNDRDLLFQTSCLELFVLRLAYRSNPDSDRYTFCNGVVLHVSQCEQTFGDWLNGINEFARGLHSMELDISAFSCLCGLILVNERHGLSDPKKVESIENKIINSLKDHVTYNPEAQKKEHYMTRILDRLPALRSLSMQGLQRIFFLKWEDLVPAPPLIEKMFASSIPF 750
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1036837|gb|AAC46926.1| (DHR38, partial [Drosophila melanogaster]) HSP 1 Score: 494.967 bits (1273), Expect = 3.807e-170 Identity = 249/350 (71.14%), Postives = 291/350 (83.14%), Query Frame = 0 Query: 24 LKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 L+A S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADKNCPVDKRRRNRCQFCRFQKCL VGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPP+SLITALVR+H+DT+PD P+ LD+S Y E S+ +EA K+QQFY LLTSS++VI++F ++IPG D+L D+ELLFQSA LELF LRLAYR + D + FC+G VLHR QC SFG+WL IMEFSR+LH +++DI AFACLCALTL+T+RHGL +PK+VE LQ K+I SL+DHVTYN +AQKKQ YFSR+L +L LRSLSVQGLQRIFYLK+ED VP PA+IE MF +++PF Sbjct: 210 LQAPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITALVRSHVDTTPD--PSCLDYSHYEEQSM-----------SEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNGTVLHRTQCLRSFGEWLNDIMEFSRSLHNLEIDISAFACLCALTLITERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTTLPF 546
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|158296777|ref|XP_317123.4| (AGAP008334-PA, partial [Anopheles gambiae str. PEST] >gi|157014874|gb|EAA12420.4| AGAP008334-PA, partial [Anopheles gambiae str. PEST]) HSP 1 Score: 501.516 bits (1290), Expect = 4.875e-170 Identity = 249/346 (71.97%), Postives = 293/346 (84.68%), Query Frame = 0 Query: 28 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADK CPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPPVS+ITALVRAH+DT+PD + SLD+SQY E E ++ EA K+QQFY+LLT+S++VI+ F D++PG ND+ D+ELLFQSA LELF LRL+YR + D + TFC+G+VLHR+QCQ SFGDWL +I+EFS++LHAM +DI AFACLCALTLVT+RHGL +PK+VE LQ K+I+SL+DHVTYN +AQ+K YFSR+L +L LRSLSVQGLQRIFYLK+ED VP P +IE MF +S+PF Sbjct: 395 SQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSMITALVRAHVDTTPDLA--SLDYSQYREPGQNEP------IITEAEKVQQFYNLLTTSVDVIKHFADKLPGYNDLSVEDQELLFQSASLELFVLRLSYRARSDDTKMTFCNGVVLHRHQCQRSFGDWLNAILEFSKSLHAMQIDISAFACLCALTLVTERHGLREPKKVEQLQMKIISSLRDHVTYNSEAQRKPHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPPLIENMFLASLPF 732
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|2133651|pir||S58238 (DHR38 protein - fruit fly (Drosophila melanogaster) >gi|929562|emb|CAA61534.1| DHR38 [Drosophila melanogaster]) HSP 1 Score: 494.582 bits (1272), Expect = 6.304e-170 Identity = 249/350 (71.14%), Postives = 291/350 (83.14%), Query Frame = 0 Query: 24 LKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 L+A S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADKNCPVDKRRRNRCQFCRFQKCL VGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPP+SLITALVR+H+DT+PD P+ LD+S Y E S+ +EA K+QQFY LLTSS++VI++F ++IPG D+L D+ELLFQSA LELF LRLAYR + D + FC+G VLHR QC SFG+WL IMEFSR+LH +++DI AFACLCALTL+T+RHGL +PK+VE LQ K+I SL+DHVTYN +AQKKQ YFSR+L +L LRSLSVQGLQRIFYLK+ED VP PA+IE MF +++PF Sbjct: 215 LQAPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITALVRSHVDTTPD--PSCLDYSHYEEQSM-----------SEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNGTVLHRTQCLRSFGEWLNDIMEFSRSLHNLEIDISAFACLCALTLITERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTTLPF 551
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|194192070|gb|EDX05646.1| (GD21688 [Drosophila simulans]) HSP 1 Score: 494.582 bits (1272), Expect = 7.203e-170 Identity = 249/350 (71.14%), Postives = 291/350 (83.14%), Query Frame = 0 Query: 24 LKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 L+A S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADKNCPVDKRRRNRCQFCRFQKCL VGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPP+SLITALVR+H+DT+PD P+ LD+S Y E S+ +EA K+QQFY LLTSS++VI++F ++IPG D+L D+ELLFQSA LELF LRLAYR + D + FC+G VLHR QC SFG+WL IMEFSR+LH +++DI AFACLCALTL+T+RHGL +PK+VE LQ K+I SL+DHVTYN +AQKKQ YFSR+L +L LRSLSVQGLQRIFYLK+ED VP PA+IE MF +++PF Sbjct: 220 LQAPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLVVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPISLITALVRSHVDTTPD--PSCLDYSHYEEQSM-----------SEADKVQQFYQLLTSSVDVIKQFAEKIPGYFDLLPEDQELLFQSASLELFVLRLAYRARIDDTKLIFCNGTVLHRTQCLRSFGEWLNDIMEFSRSLHNLEIDISAFACLCALTLITERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKQHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVTTLPF 556
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1135078485|ref|XP_019892054.1| (PREDICTED: probable nuclear hormone receptor HR38 [Musca domestica]) HSP 1 Score: 507.294 bits (1305), Expect = 8.056e-170 Identity = 250/346 (72.25%), Postives = 297/346 (85.84%), Query Frame = 0 Query: 28 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPPVSLITALVR+H+DT+PD P+ LD+SQY E +L LV++EA K+QQFY+LLT+S++VI++F ++IPG +D+ D+ELL QSA LELF LRL+YR + D + TFC+G+VLHR+QCQ SFGDWL I+EFS++LH++++DI AFACLCALTL+TDRHGL +PK+VE LQ K+I SL+DHVTYN +AQKK YFSR+L +L LRSLSVQGLQRIFYLK+ED VP PA+IE MF +S+PF Sbjct: 598 SQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALVRSHVDTTPD--PSCLDYSQYREPGQADLP----LVMSEAEKVQQFYNLLTTSVDVIKQFAEKIPGYSDLTQEDQELLLQSASLELFVLRLSYRARVDDTKMTFCNGIVLHRSQCQRSFGDWLNGILEFSKSLHSLEIDISAFACLCALTLITDRHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKPHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVASLPF 937
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1279748360|ref|XP_022919139.1| (probable nuclear hormone receptor HR38 isoform X1 [Onthophagus taurus]) HSP 1 Score: 496.508 bits (1277), Expect = 8.804e-170 Identity = 255/367 (69.48%), Postives = 297/367 (80.93%), Query Frame = 0 Query: 7 PLGPPPPPLTRSPASGDLKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 P GP PP + S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADK CPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPPVSLITALVRAH+DT+PD + +LD+SQY E S E +++EA KIQQFY LLT+S++VIR F ++IPG D+ D+ELLFQSA LELF LRLAYR P+ + TFC+G+VL + QCQ SFGDWL +IMEF +LH+M++DI AFACLCAL LVTDRHGL +P RVE LQ K+I+SLKDHVTYN +AQ+KQ YFSR+L +L LRSLS+QGLQRIFYLK+ED VP P +IE+MFA+++PF Sbjct: 261 PKGPTPP------------SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALVRAHVDTTPDLA--NLDYSQYCEPSPIEP------MISEAEKIQQFYTLLTTSVDVIRNFAEKIPGFQDLCPEDKELLFQSASLELFVLRLAYRTHPNDTKLTFCNGVVLDKQQCQRSFGDWLHTIMEFCNSLHSMEIDISAFACLCALDLVTDRHGLKEPSRVEQLQMKIISSLKDHVTYNAEAQRKQHYFSRLLGKLPELRSLSIQGLQRIFYLKLEDLVPAPPLIERMFAATLPF 607
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1279748362|ref|XP_022919140.1| (probable nuclear hormone receptor HR38 isoform X2 [Onthophagus taurus]) HSP 1 Score: 496.123 bits (1276), Expect = 8.907e-170 Identity = 255/367 (69.48%), Postives = 297/367 (80.93%), Query Frame = 0 Query: 7 PLGPPPPPLTRSPASGDLKATSLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 P GP PP + S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADK CPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPPVSLITALVRAH+DT+PD + +LD+SQY E S E +++EA KIQQFY LLT+S++VIR F ++IPG D+ D+ELLFQSA LELF LRLAYR P+ + TFC+G+VL + QCQ SFGDWL +IMEF +LH+M++DI AFACLCAL LVTDRHGL +P RVE LQ K+I+SLKDHVTYN +AQ+KQ YFSR+L +L LRSLS+QGLQRIFYLK+ED VP P +IE+MFA+++PF Sbjct: 258 PKGPTPP------------SPSQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKACPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALVRAHVDTTPDLA--NLDYSQYCEPSPIEP------MISEAEKIQQFYTLLTTSVDVIRNFAEKIPGFQDLCPEDKELLFQSASLELFVLRLAYRTHPNDTKLTFCNGVVLDKQQCQRSFGDWLHTIMEFCNSLHSMEIDISAFACLCALDLVTDRHGLKEPSRVEQLQMKIISSLKDHVTYNAEAQRKQHYFSRLLGKLPELRSLSIQGLQRIFYLKLEDLVPAPPLIERMFAATLPF 604
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Match: gi|1321295962|ref|XP_023308563.1| (probable nuclear hormone receptor HR38 [Lucilia cuprina]) HSP 1 Score: 504.597 bits (1298), Expect = 3.183e-169 Identity = 250/346 (72.25%), Postives = 296/346 (85.55%), Query Frame = 0 Query: 28 SLLCAVCGDNAACQHYGVRTCEGCKGFFKRTVQKNAKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPRSPQEQPPSPPVSLITALVRAHIDTSPDSSPNSLDFSQYMEASVEELETKEGLVVNEATKIQQFYHLLTSSIEVIRKFCDRIPGINDILASDRELLFQSACLELFALRLAYRIQPDSDQFTFCHGLVLHRNQCQHSFGDWLGSIMEFSRTLHAMDLDIQAFACLCALTLVTDRHGLSDPKRVENLQSKVINSLKDHVTYNPDAQKKQQYFSRILERLTPLRSLSVQGLQRIFYLKMEDTVPVPAVIEKMFASSIPF 373 S LCAVCGD AACQHYGVRTCEGCKGFFKRTVQK +KYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKP+SPQE PPSPPVSLITALVR+H+DT+PD P+ LD+SQY E S + +V++EA K+QQFY+LLT+S++VI++F ++IPG D+ A D+ELL QSA LELF LRL+YR + D + TFC+G+VLHR+QCQ SFGDWL I+EFS++LH +++DI AFACLCALTLVT+RHGL +PK+VE LQ K+I SL+DHVTYN +AQKK YFSR+L +L LRSLSVQGLQRIFYLK+ED VP PA+IE MF +S+PF Sbjct: 557 SQLCAVCGDTAACQHYGVRTCEGCKGFFKRTVQKGSKYVCLADKNCPVDKRRRNRCQFCRFQKCLAVGMVKEVVRTDSLKGRRGRLPSKPKSPQESPPSPPVSLITALVRSHVDTTPD--PSCLDYSQYREPS----QAASPVVMSEAEKVQQFYNLLTTSVDVIKQFAEKIPGYLDLTAEDQELLLQSASLELFVLRLSYRARVDDTKMTFCNGIVLHRSQCQRSFGDWLNGILEFSKSLHNLEIDISAFACLCALTLVTERHGLREPKKVEQLQMKIIGSLRDHVTYNAEAQKKPHYFSRLLGKLPELRSLSVQGLQRIFYLKLEDLVPAPALIENMFVASLPF 896 The following BLAST results are available for this feature:
BLAST of probable nuclear hormone receptor hr38-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
Pagesback to top
BLAST of probable nuclear hormone receptor hr38-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of probable nuclear hormone receptor hr38-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold743_size103610:125..6045- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold743_size103610-snap-gene-0.17 ID=maker-scaffold743_size103610-snap-gene-0.17|Name=probable nuclear hormone receptor hr38-like|organism=Tigriopus kingsejongensis|type=gene|length=5921bp|location=Sequence derived from alignment at scaffold743_size103610:125..6045- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'probable nuclear hormone receptor hr38-like' has the following synonyms
Add to Basket
|