choline dehydrogenase, maker-scaffold7610_size3089-snap-gene-0.2 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of choline dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000000122 (supercontig:LSalAtl2s:LSalAtl2s101:523216:528117:1 gene:EMLSAG00000000122 transcript:EMLSAT00000000122 description:"maker-LSalAtl2s101-snap-gene-5.35") HSP 1 Score: 365.925 bits (938), Expect = 7.288e-116 Identity = 202/507 (39.84%), Postives = 286/507 (56.41%), Query Frame = 0 Query: 205 VLLLEAGNKDH-------NPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAIRYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCADTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMG--QDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLI 702 + LLEAG KD IH+PA + L + +W + T Q +NNR + PRG+ GGSSS+NAMVYIRG ED ++W G GW Y++ LPYF K++ + + G GPL VS N L ++ A +QAG +D NG Q+G+ ++++T G R S A AYL+PA R NLT A +++L +G RA G+EYLRNGK EVILS G+I SPQLLMLSG+G A+ L I + GVG+NL DHL + V+ K+ TL Q+GL+ +++ + G A++ ESGGF + +I FHFLP V G +H +R + G I+L +P P+I +L + ++ MRE ++++R I + A + E PG + SD+ +DA+IR A++ +HP TCKMG D++ VVD RV GL+ LRVVDASIMP++ SGN NAP +MI E+A+D+I Sbjct: 277 IFLLEAGPKDTFLGSCYLQWKIHMPAALMYNLCDDKYNWYYNTLPQKHMNNRSMYWPRGRVWGGSSSLNAMVYIRGHAEDQNRWESEGAEGWNYQNCLPYFKKAQTHEWGP--SAYRGGNGPLHVSRGTSNNSLHSVWLEAGQQAGYPFTDDVNGYQQEGMSQFEMTIKKGMRNSTASAYLRPALSRPNLTTEVGALVTRILFDGKRAIGIEYLRNGKELKRVYADEVILSGGSINSPQLLMLSGVGPAQHLKEMDIPLVADIQGVGQNLQDHLEVYVVQECKKPITLLKDQKGLRMIQVGLQWFYNQTGSASTTHLESGGFVRSRPDVSHPNIMFHFLPSQVIDHGRQSPKIEAYQVHVGPMRSSSRGWIQLKSNDPRDHPIIQPNYLSTDFDVHEMRESVRLSRNIFAQPAFDPYRGIEIAPGHELTSDKDIDAFIRDKADSAYHPSCTCKMGSTSDNMTVVDPCTRVVGLEGLRVVDASIMPSIASGNLNAPTIMIAERAADII 781
BLAST of choline dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000012767 (supercontig:LSalAtl2s:LSalAtl2s96:160426:167507:-1 gene:EMLSAG00000012767 transcript:EMLSAT00000012767 description:"maker-LSalAtl2s96-snap-gene-1.14") HSP 1 Score: 327.405 bits (838), Expect = 4.656e-103 Identity = 227/635 (35.75%), Postives = 310/635 (48.82%), Query Frame = 0 Query: 134 IGVAIAANPSLDGMSIGYLFALLGSLSYAALFITEIEGLPMQDN----QFDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLL------------GNASV--------DWCFKTTAQPALN-----NRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRAT--GVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAIRYLATRNGPANSNAAESGGFYATALSDGRA----DIQFHFLPIMVYPPGCADTGRHGVTLHACH----------------------LRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALA-------DHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMG--QDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLI 702 +GV + +L S+ + AL+ SL+ +T+ E P+ N ++D+II+GAGSAG VLANRL+E RVLLLEAG + S VPA +A L G SV DW +KT QP N Q + PRG+ +GGSS +N M+Y+RG R+DYD W + GNPGW Y +VL YF KSE+N L PL+ AFV + G N D NGE Q G Q T G RCS + A+L+P R R+NL I NA+ KVL++ +R T GV + RNG+ HA+KEVI+SAGAI S QLLMLSGIG L GI L +G+NL DH L F+ D + Q + + ++Y GP G + + R DI+FHF V +D GR +H LRP G IRL NP P+++ + ++ V+ EG+K + ++A D + C S + +D R + T +H GT KMG D +VV+ E +V+G++ LRV+D SI+P + SGNTNAP +MIGE+ +DLI Sbjct: 1 VGVGSLSAAALLKTSLWFFPALIASLAIYHHALTDPEKHPINTNNLFKEYDFIIVGAGSAGSVLANRLTEISNWRVLLLEAGGDETEIS-DVPA-LAXFLQLGKCLIILFIGGTESVVINREGRMDWQYKTEPQPGRACLGHVNGQCNWPRGRVIGGSSVLNYMLYVRGNRKDYDIWANDGNPGWDYNNVLHYFKKSEDNRNPYLAAT---------------KTPLATAFVEGGVEMGYE-NRDCNGEFQTGFMLPQGTIRRGSRCSTSKAFLRPIRHRNNLXIAKNAYVMKVLIDPSRKTAYGVRFRRNGRVFEVHARKEVIMSAGAINSAQLLMLSGIGPGWHLQNLGIPIIQDLP-IGENLMDHYGTGALTFT-IDQPISLVQSRYENLPSILKYAIFGTGPLTVLGGVEGLAWVPTKFENRTEDWPDIEFHFASGSV----ASDGGRQIRKVHGLSDSVWKMFRPLAYKDTFSILPMLLRPKSKGTIRLKSKNPFEKPIVNAGYFTHPDDMKVLVEGIKFGLALAQTKAFKKFGARFWDKVPMPGCENSPLWTDSYWAXIXRQYTTTIYHYSGTAKMGPPHDPSSVVNHELKVYGVKGLRVIDXSIIPKIPSGNTNAPVIMIGERGADLI 611
BLAST of choline dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000005902 (supercontig:LSalAtl2s:LSalAtl2s319:39372:42896:1 gene:EMLSAG00000005902 transcript:EMLSAT00000005902 description:"snap_masked-LSalAtl2s319-processed-gene-0.21") HSP 1 Score: 246.128 bits (627), Expect = 1.723e-73 Identity = 168/471 (35.67%), Postives = 242/471 (51.38%), Query Frame = 0 Query: 178 QFDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPA-----LNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQL-DKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKP-ARRRSNLTIVTNAHASKVLLEGTR--ATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAIR-YLATRNGPANSN-AAESGGFYATALSDGRADIQFHFLPIMVYPPGCADTGRH-----------------------GVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADH 614 ++DYII+G GSAG VLA+RL+ENPQ +LL+EAG H + +PA L + DW F+T Q + NR PRGK LGG++ +N M+Y+RG + D+D+W ++G GWGYE VLPYF KSE G+ D HG G + VSD Y P++ + A+ AGL D+N E Q G Q+T G R +Y++P +R NL I+T +H +K+L + + TGVE LR GKT+ A KE+ILSAGAI SP +LM SG+G A+ L I L VG NL DH I+ + N S+ + + Y GP ++ A + GF L D ++Q HF+ + +Y AD G H +++ LRP G IRL+ ++PL++PLI+ +L ++ + + + +L Q A H Sbjct: 46 KYDYIIVGGGSAGSVLASRLTENPQINILLIEAGGHPHFLT-GIPA-FTPYLQLSPYDWSFETEKQDEACKGMIGNR-CKWPRGKMLGGTAGMNYMLYVRGNKRDFDEWEEMGFEGWGYEKVLPYFKKSELQLGRYAHDTKHHGTEGNVPVSDSIYITPMAKVYKELAQLAGLPI-RDYNAENQTGFDIPQLTMRNGWRGDPYRSYIEPIMNKRPNLKILTYSHVTKLLFDDNKKIVTGVELLRFGKTYNVSASKEIILSAGAIGSPTILMHSGVGHAQHLKDLNIPLVKDLP-VGDNLQDH--ITTMLGPLLVNQSASFDVIETMSFSTMWDYFVHGKGPLSTTVAVDFNGF----LVD--ENVQLHFIGVPLY----ADYGLHSRKTFNIDSTLWDDYFSKLYGLSSISVLPALLRPKSRGTIRLSSSDPLASPLINPNYLSHPQDIQDLIKIIDWVLNVLFDQKKASH 499
BLAST of choline dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000013076 (supercontig:LSalAtl2s:LSalAtl2s9:868318:874523:1 gene:EMLSAG00000013076 transcript:EMLSAT00000013076 description:"snap_masked-LSalAtl2s9-processed-gene-8.14") HSP 1 Score: 155.221 bits (391), Expect = 7.694e-43 Identity = 89/251 (35.46%), Postives = 137/251 (54.58%), Query Frame = 0 Query: 184 IGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQP------ALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKN--FHGHGGPLSVSDRRYTNPLSDAFVSAAEQAG--LSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKE 424 IG G+AG LA RLSE R+LL+E+G + + + +P LL + W + + Q + ++ RG+ +GG+ +IN M+Y+RG R DYD W LGN GW + DVLP+F K EN G L+K+ FHG GP+ + PL F++A + G +S N +N Q G + T G+R +++ AYL P NL + N+H K++++ +A G++ ++NGK H +AKKE Sbjct: 4 IGGGTAGSTLAGRLSEKKDLRILLVESGG-EQSIKLKIPW-FHSLLYGSPHSWHYLSEDQEHNQALLGYDGKKSIWWRGRVIGGTGAINTMIYMRGNRHDYDHWALLGNEGWSFSDVLPFFRKLENVKGTDLEKDVQFHGTEGPMKIEYGSQVTPLQKGFLNAGKLLGYPISDPNSYN---QFGFSKILFTIKDGQRWTSSDAYLHP--ENPNLKVSINSHVLKIIIKHKKAMGIDMIKNGKIHRIYAKKE 247
BLAST of choline dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000006921 (supercontig:LSalAtl2s:LSalAtl2s391:573638:588537:1 gene:EMLSAG00000006921 transcript:EMLSAT00000006921 description:"maker-LSalAtl2s391-snap-gene-5.42") HSP 1 Score: 72.7886 bits (177), Expect = 7.546e-14 Identity = 83/298 (27.85%), Postives = 125/298 (41.95%), Query Frame = 0 Query: 192 VLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQP----ALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGET-QQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLE--GTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQD 482 VLA RLSE VLL+E G++ S +VP A L G W +++ Q +R I RGK+LGGS N + + N + Y + + G P + L+ AF+S E+A R +N ET QG+ + G+R S AYLKP R NL ++ N K+ + + + + + GKT + K++IL+ GAI +P+LL SG+G +Q+ + + VG L DHL + K D Sbjct: 28 VLAARLSEXKNYHVLLIEKGDEASYAS-YVPI-FAPLQGLFDPTWEYESEPQRNSHYGYKDRISKITRGKSLGGSGHYNYHI--------------ISNETFEY-------------CTESIRNRVRSKGSPYHI--------LTQAFLS--EEA---RFPGWNFETILQGIYK-------GKRFSNFDAYLKPVLNRKNLHVLINTEVIKIDFKDKSPESLHITHQKEGKTIKLNKIKKLILAGGAINTPKLLFESGVGPKDQINKLNVTLVEDIP-VGNELQDHLTCPLYFHLKND 275
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|42558889|sp|Q9WWW2.1|ALKJ_PSEPU (RecName: Full=Alcohol dehydrogenase [acceptor]) HSP 1 Score: 485.723 bits (1249), Expect = 8.605e-164 Identity = 256/529 (48.39%), Postives = 334/529 (63.14%), Query Frame = 0 Query: 179 FDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDK-NFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKK--EVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAI-RYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCADTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMGQDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLIL 703 +DYII+GAGSAGCVLANRLS +P +RV LLEAG +D NP IH+P GIA L + ++W F+T Q LN R + PRGKTLGGSSSINAMVYIRG EDY W G WG++ F K E+N ++ DK N+HG G L+VSD + NPLS +FV A +A +S N DFNG Q+GVG YQVT G+R S+A A+L R NL I+T AHA+KVL E +A GV Y++ EVILS GA+ +PQLLMLSG+G A +L HGI H L VGKNL DHL+I+++ + + + +GL + Y+ R G SN AESGGF ++ R ++QFHFLP + G +G TLH C L P G I L ANP+ PLID +L ++ M G+KI R I + ++A H E PG +V SD+++ A IR+ AET +HPVGTC+MG+D +VVD +V GL+N+RVVDASIMP L++GNTNAP +MI E A+++I+ Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAFQTAPQQHLNERSLFWPRGKTLGGSSSINAMVYIRGHEEDYQAWEQAGGEYWGWKRAFALFKKLEHN--QRFDKSNYHGTDGELAVSDLKDLNPLSKSFVQAGMEAKISFNGDFNGAHQEGVGFYQVTQKHGQRWSSARAFLHDVIDRPNLDIITEAHATKVLFEDRKAVGVSYIQKNMHQQVKTTDSGEVILSLGAVNTPQLLMLSGVGAAAELKEHGIALVHDLPEVGKNLQDHLDITLMCAANSRTPIGVAFSFIPRGLVGLFSYIFKRKGFLTSNVAESGGFVKSSPERDRPNLQFHFLPTYLKDHGRKIAVGYGYTLHICDLLPKSRGRIGLKSANPMDDPLIDPNYLSDPEDIKTMIAGIKIGRAIFDAPSMAKHFKREIVPGPAVTSDDEIVADIRSRAETIYHPVGTCRMGKDPASVVDPCLQVRGLRNIRVVDASIMPNLVAGNTNAPTIMIAENAAEIIV 528
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|416604|sp|Q00593.1|ALKJ_PSEOL (RecName: Full=Alcohol dehydrogenase [acceptor]) HSP 1 Score: 483.411 bits (1243), Expect = 9.535e-163 Identity = 252/529 (47.64%), Postives = 334/529 (63.14%), Query Frame = 0 Query: 179 FDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKN-FHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKK--EVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAI-RYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCADTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMGQDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLIL 703 +DYII+GAGSAGCVLANRLS +P +RV LLEAG +D NP IH+P GIA L + ++W F+T Q LN R + PRGKTLGGSSSINAMVYIRG +DY W WG+ L F + E N ++ DK+ HG G L+VSD +Y NPLS AFV A +A ++ N DFNGE Q GVG YQVT G+R S+A A+L R NL I+T+AHASK+L E +A GV Y++ H EV+LS GA+ +P LLMLSG+G A +L HG+ H L VGKNL DHL+I+++ + + + +G++ + Y+ R G SN AESGGF ++ R ++QFHFLP + G G +G TLH C L P G I L ANPL PLID +L ++ M G+KI R IL + ++A H E PG +V++D+++ IR AET +HPVGTC+MG+D +VVD ++ GL N+RVVDASIMP L++GNTNAP +MI E A+++I+ Sbjct: 2 YDYIIVGAGSAGCVLANRLSADPSKRVCLLEAGPRDTNPLIHMPLGIALLSNSKKLNWAFQTAPQQNLNGRSLFWPRGKTLGGSSSINAMVYIRGHEDDYHAWEQAAGRYWGWYRALELFKRLECN--QRFDKSEHHGVDGELAVSDLKYINPLSKAFVQAGMEANINFNGDFNGEYQDGVGFYQVTQKNGQRWSSARAFLHGVLSRPNLDIITDAHASKILFEDRKAVGVSYIKKNMHHQVKTTSGGEVLLSLGAVGTPHLLMLSGVGAAAELKEHGVSLVHDLPEVGKNLQDHLDITLMCAANSREPIGVALSFIPRGVSGLFSYVFKREGFLTSNVAESGGFVKSSPDRDRPNLQFHFLPTYLKDHGRKIAGGYGYTLHICDLLPKSRGRIGLKSANPLQPPLIDPNYLSDHEDIKTMIAGIKIGRAILQAPSMAKHFKHEVVPGQAVKTDDEIIEDIRRRAETIYHPVGTCRMGKDPASVVDPCLKIRGLANIRVVDASIMPHLVAGNTNAPTIMIAENAAEIIM 528
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|229462828|sp|Q8NE62.2|CHDH_HUMAN (RecName: Full=Choline dehydrogenase, mitochondrial; Short=CDH; Short=CHD; Flags: Precursor) HSP 1 Score: 454.907 bits (1169), Expect = 3.762e-151 Identity = 246/536 (45.90%), Postives = 331/536 (61.75%), Query Frame = 0 Query: 177 NQFDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKD-------HNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKN-FHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAIRYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCADTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMGQ--DDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLI 702 +++ Y+++GAGSAGCVLA RL+E+P RVLLLEAG KD + IH+PA + L + +WC+ T Q L+ R + PRG+ GGSSS+NAMVY+RG EDY++W+ G GW Y LPYF K++ G +L + + G GPL VS + +PL AF+ A +QAG D NG Q+G G +T G+R SAA AYL PA R+NL S+VL EGTRA GVEY++NG++H A+A KEVILS GAI SPQLLMLSGIG A+ L GI L GVG+NL DHL I + + TL S Q+ L+K + +L G + E+GGF + DIQFHFLP V G T + +H +R T VG ++L ANP P+I +L E ++ R +K+ R+I + +ALA +E PGS +QSD+++DA++RA A++ +HP TCKMGQ D AVVD + RV G++NLRVVDASIMP+++SGN NAP +MI EKA+D+I Sbjct: 39 DEYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLAGSKRLSWKIHMPAALVANLCDDRYNWCYHTEVQRGLDGRVLYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWDYAHCLPYFRKAQ---GHELGASRYRGADGPLRVSRGKTNHPLHCAFLEATQQAGYPLTEDMNGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRTNLKAEAETLVSRVLFEGTRAVGVEYVKNGQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKKLGIPVVCHLPGVGQNLQDHLEIYIQQACTRPITLHSAQKPLRKVCIGLEWLWKFTGEGATAHLETGGFIRSQPGVPHPDIQFHFLPSQVIDHGRVPTQQEAYQVHVGPMRGTSVGWLKLRSANPQDHPVIQPNYLSTETDIEDFRLCVKLTREIFAQEALAPFRGKELQPGSHIQSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDPQTRVLGVENLRVVDASIMPSMVSGNLNAPTIMIAEKAADII 571
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|81885843|sp|Q6UPE0.1|CHDH_RAT (RecName: Full=Choline dehydrogenase, mitochondrial; Short=CDH; Short=CHD; Flags: Precursor) HSP 1 Score: 453.751 bits (1166), Expect = 1.033e-150 Identity = 244/536 (45.52%), Postives = 329/536 (61.38%), Query Frame = 0 Query: 177 NQFDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDH-------NPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKN-FHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAIRYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCADTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMGQ--DDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLI 702 +++ +I++GAGSAGCVLANRL+E+P RVLLLEAG KD IH+PA + L + +W + T AQP L+ R + PRG+ GGSSS+NAMVYIRG EDY++W G GW Y LPYF K++ + +L N + G GPL VS + +PL AF+ AA QAG D NG Q+G G +T G+R S A AYL+PA R NL S+VL EGTRA GVEY+++G++H A+ +EVILS GAI SPQLLMLSG+G A+ L GI L GVG+NL DHL I + Q TL S Q+ L+K + +L G + E+GGF + DIQFHFLP V G T + +H +R T VG ++L NP P+I+ +L E ++ R+ +K+ R+I + +A A +E PGS VQSD+++DA++RA A++ +HP TCKMGQ D AVVD + RV G++NLRV+DASIMP+++SGN NAP +MI EKA+D+I Sbjct: 44 DEYTFIVVGAGSAGCVLANRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVANLCDDKYNWYYHTEAQPGLDGRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHRQGAEGWDYAHCLPYFRKAQKH---ELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGWMDMTIHQGKRWSTASAYLRPALSRPNLRAEVQTLVSRVLFEGTRAVGVEYIKDGQSHKAYVSREVILSGGAINSPQLLMLSGVGNADDLKKLGIPVVCHLPGVGQNLQDHLEIYIQHACTQPITLHSAQKPLRKVCIGLEWLWRFTGDGATAHLETGGFIRSRPGVPHPDIQFHFLPSQVIDHGRKPTQQEAYQVHVGTMRATSVGWLKLRSTNPQDHPMINPNYLSTETDVEDFRQCVKLTREIFAQEAFAPFRGKELQPGSHVQSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDQQTRVIGVENLRVIDASIMPSVVSGNLNAPTIMIAEKAADVI 576
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|75499879|sp|Q47944.1|SDH_GLUOY (RecName: Full=L-sorbose 1-dehydrogenase; Short=SDH) HSP 1 Score: 448.358 bits (1152), Expect = 1.600e-149 Identity = 232/527 (44.02%), Postives = 318/527 (60.34%), Query Frame = 0 Query: 179 FDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAIRYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCADT--GRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQL-DAYIRAHAETEFHPVGTCKMGQDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLI 702 FDYI++G GSAGCVLA RLSENP RV L+EAG +D +P IH+P G A + W T Q NNRQI +G+ LGG SSINA V+ RG D+D+W G GW + DV YFI+SE N+ +HG GPL VS+ NP S AFV + ++ GL N DFNG +Q+G G YQ+T RRCS AV YL+PA R NLT+VT A K++ GTRATGV+Y+ NG +TA A +E++++AGAI +P+L+MLSG+G A L +GI L GVG+NL DH + ++A K D + + Y++ A + Y R+GP SN E G F+ + S G D+QFHFL G G G+TL++ LRP G +RL A+P P++D FL +L EG++++ ++ S +L H+ + C S Q Q+ Y R H T +HP TCKMG+DD++VVD +VHGL+ +R+ D+S+MP+L+ NTNA +MI E+A+D I Sbjct: 5 FDYIVVGGGSAGCVLAARLSENPSVRVCLIEAGRRDTHPLIHMPVGFAKMTTGPHT-WDLLTEPQKHANNRQIPYVQGRILGGGSSINAEVFTRGHPSDFDRWAAEGADGWSFRDVQKYFIRSEGNA--VFSGTWHGTNGPLGVSNLAEPNPTSRAFVQSCQEMGLPYNPDFNGASQEGAGIYQMTIRNNRRCSTAVGYLRPALGRKNLTVVTRALVLKIVFNGTRATGVQYIANGTLNTAEASQEIVVTAGAIGTPKLMMLSGVGPAAHLRENGIPVVQDLPGVGENLQDHFGVDIVAELKTDESFDKYRKLHWMLWAGLEYTMFRSGPVASNVVEGGAFWYSDPSSGVPDLQFHFLAEAGAEAGVTSVPKGASGITLNSYVLRPKSRGTVRLRSADPRVNPMVDPNFLGDPADLETSAEGVRLSYEMFSQPSLEKHI-RKTCFFSGKQPTMQMYRDYAREHGRTSYHPTCTCKMGRDDMSVVDPRLKVHGLEGIRICDSSVMPSLLGSNTNAATIMISERAADFI 527
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|42558900|sp|Q8BJ64.1|CHDH_MOUSE (RecName: Full=Choline dehydrogenase, mitochondrial; Short=CDH; Short=CHD; Flags: Precursor) HSP 1 Score: 444.891 bits (1143), Expect = 3.017e-147 Identity = 239/536 (44.59%), Postives = 329/536 (61.38%), Query Frame = 0 Query: 177 NQFDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDH-------NPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKN-FHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAIRYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCADTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMGQ--DDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLI 702 +++ ++++GAGSAGCVLA+RL+E+P RVLLLEAG KD IH+PA + L + +W + T QP +++R + PRG+ GGSSS+NAMVYIRG EDY++W G GW Y LPYF K++ + +L N + G GPL VS + +PL AF+ AA QAG D NG Q+G G +T G+R S A AYL P R NL S+VL EGTRA GVEY+++G+ H A+ +EVILS GAI SPQLLMLSG+G A+ L I L GVG+NL DHL + V Q TL S Q+ L+K + +L + G + E+GGF + DIQFHFLP V G T + +H +R T VG ++L ANP P+I +L E ++ R+ ++++R+I + +ALA +E PGS VQSD+++DA++RA A++ +HP TCKMG+ D AVVDA+ +V G++NLRVVDASIMP+++SGN NAP +MI EKA+D+I Sbjct: 41 DEYTFVVVGAGSAGCVLASRLTEDPNHRVLLLEAGPKDLLMGSKRLQWKIHMPAALVSNLCDDKYNWYYHTEPQPGMDSRVLYWPRGRVWGGSSSLNAMVYIRGHAEDYNRWHREGAEGWDYAHCLPYFRKAQRH---ELGANMYRGGDGPLHVSRGKTNHPLHQAFLQAARQAGYPFTEDMNGFQQEGFGWMDMTVHQGKRWSTACAYLHPVLSRPNLRAEVQTLVSRVLFEGTRAVGVEYIKDGQRHKAYVSREVILSGGAINSPQLLMLSGVGNADDLRKLDIPVVCHLPGVGQNLQDHLEVYVQQACTQPITLHSAQKPLRKVCIGLEWLWSYTGDGATAHLETGGFIRSRPGVPHPDIQFHFLPSQVIDHGRKPTQQEAYQVHVGTMRATSVGWLKLRSANPRDHPVIHPNYLSTETDVEDFRQCVRLSREIFAQEALAPFRGKELQPGSHVQSDKEIDAFVRAKADSAYHPSCTCKMGRSSDPTAVVDAQTKVIGVENLRVVDASIMPSVVSGNLNAPTVMIAEKAADII 573
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|166224135|sp|A6X2G7.1|BETA_OCHA4 (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH) HSP 1 Score: 427.172 bits (1097), Expect = 4.648e-141 Identity = 228/526 (43.35%), Postives = 305/526 (57.98%), Query Frame = 0 Query: 180 DYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAIRYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCADTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMG--QDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLIL 703 D++IIG+GSAG +A RLSE+ + V+++E G D P I +PA ++ + + DW F T +P + R + PRGK LGGSSSIN MVY+RG DYD W + G GW Y DVLPYF + EN+SG Q + + G GPL + + NPL AFV A +AG D+NGE Q+G G + T GRR SAA AYLKPA +R N+ +V A K++LEG RA GVE T A++EVI++A +I SP+LLMLSGIG A QL HGI+ GVG+NL DHL + + Q TL S K +L + G +N ES F + DIQ+HFLP+ + G A HG H +R G + L ANP P+I ++ E + A R +++ R+I A + E PG+ VQSD+++D +I+ H E+ FHP GTCKMG D +AVVDAECRV G++ LRV D+SI P + +GN N P +M+GEKASD IL Sbjct: 4 DFVIIGSGSAGSAMAYRLSEDGRYSVIVIEYGVPDVGPLIQMPAALSFPMNMETYDWGFSTEPEPHIGGRSLVTPRGKVLGGSSSINGMVYVRGHARDYDHWSESGARGWAYADVLPYFKRMENSSGGQ--EGWRGTNGPLYIQRGKRDNPLFHAFVEAGHEAGFEVTEDYNGEKQEGFGPMEQTIHNGRRWSAANAYLKPALKRPNVKLVKGL-ARKIVLEGKRAVGVEIEAGRSFSTIRARREVIIAASSINSPKLLMLSGIGPAAQLKEHGIEVVADRPGVGQNLQDHLEVYIQQECTQPITLYSKLNLFSKAKIGAEWLFFKTGDGATNHFESAAFLRSKAGVEYPDIQYHFLPVAIRYDGKAAAQSHGFQAHVGPMRSKSRGSVTLRSANPREKPVIKFNYMSHEDDWADFRHCVRLTREIFGQAAFNPYRGAEIQPGAHVQSDDEIDNFIKEHVESAFHPCGTCKMGAVDDPMAVVDAECRVIGVEGLRVADSSIFPRITNGNLNGPSIMVGEKASDHIL 526
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|226698893|sp|B5ZUG2.1|BETA_RHILW (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH) HSP 1 Score: 426.402 bits (1095), Expect = 8.590e-141 Identity = 222/529 (41.97%), Postives = 314/529 (59.36%), Query Frame = 0 Query: 178 QFDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAIRYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCADTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMG--QDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLILA 704 Q D++IIG+GSAG LA RLSE+ + VL++EAG D P I +PA +A + +W + + +P LNNR+I PRGK +GGSSSIN MVY+RG ED+++W +LG GW Y DVLPYF + E++ G + + + G GPL V +TNPL AFV A +QAG D+NG Q+G G + T +GRR SAA AYLKPA +R N+ I+ A ++++E RATGVE R GK A +EVI+SA + SP+LLMLSGIG E L GI+ + GVG NL DH+ S + +L S+ +G+A ++L ++ G SN E+ F +A + DIQ+HFLP+ + G A HG +H + G + L +P + P++ ++ + R +++ R++ A D+ E PG SVQSDE++DA++R H E+ +HP GTCKMG D +AVVD + RV G++ LRV D+SI P + GN N P +M GEKA+D IL Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYLSEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGAGGWAYADVLPYFKRMEHSHGGE--EGWRGTDGPLHVQRGGFTNPLFRAFVEAGKQAGFETTEDYNGSKQEGFGLMEQTIFSGRRWSAANAYLKPALKRKNVEIIY-GFAQRIVIEDGRATGVEIERGGKIEVVKANREVIVSASSFNSPKLLMLSGIGPGEHLKEMGIEVKADRPGVGANLQDHMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLRSAPGLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVTLRSPDPKADPVLRFNYMSHAEDWEKFRHCVRLTRELFGQAAFDDYRGAEIQPGESVQSDEEIDAFLREHLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGVEALRVADSSIFPHVTYGNLNGPSIMTGEKAADHILG 527
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|122056599|sp|Q2KB43.1|BETA_RHIEC (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH) HSP 1 Score: 425.246 bits (1092), Expect = 3.231e-140 Identity = 222/529 (41.97%), Postives = 314/529 (59.36%), Query Frame = 0 Query: 178 QFDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAIRYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCADTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMG--QDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLILA 704 Q D++IIG+GSAG LA RLSE+ + VL++EAG D P I +PA +A + +W + + +P LNNR+I PRGK +GGSSSIN MVY+RG ED+++W +LG GW Y DVLPYF + E++ G + + + G GPL V +TNPL AF+ A +QAG D+NG Q+G G + T AGRR SAA AYLKPA +R N+ IV A ++++E RATGVE R G+T A +EVI+SA + SP+LLMLSGIG A+ L GI+ + GVG NL DH+ S + +L S+ +G+A ++L ++ G SN E+ F +A + DIQ+HFLP+ + G A HG +H + G + L +P + P++ ++ + R +++ R+I +A + E PG VQSDEQ+D+++R H E+ +HP GTCKMG D +AVVD + RV G+ LRV D+SI P + GN N P +M GEKA+D IL Sbjct: 2 QADFVIIGSGSAGSALAYRLSEDGKNSVLVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYLSEPEPNLNNRRITAPRGKVIGGSSSINGMVYVRGHAEDFNRWEELGASGWAYADVLPYFKRMEHSHGGE--EGWRGTDGPLHVQRGGFTNPLFRAFIEAGKQAGFETTEDYNGSKQEGFGLMEQTIFAGRRWSAANAYLKPALKRDNVGIVYGL-ARRIVIENGRATGVEIERGGRTEVVKANREVIVSASSFNSPKLLMLSGIGPAKHLKEMGIEVKADRPGVGANLQDHMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLRSAPGLKQPDIQYHFLPVAISYDGKAAAKSHGFQVHVGYNLSKSRGSVTLRSPDPKADPVLRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDAYRGPEIQPGEGVQSDEQIDSFLREHLESAYHPCGTCKMGAKDDPMAVVDPQTRVIGVDGLRVADSSIFPHVTYGNLNGPSIMTGEKAADHILG 527
BLAST of choline dehydrogenase vs. SwissProt
Match: gi|42558873|sp|Q8UH55.2|BETA_AGRFC (RecName: Full=Oxygen-dependent choline dehydrogenase; Short=CDH; Short=CHD; AltName: Full=Betaine aldehyde dehydrogenase; Short=BADH) HSP 1 Score: 421.394 bits (1082), Expect = 8.174e-139 Identity = 220/529 (41.59%), Postives = 314/529 (59.36%), Query Frame = 0 Query: 178 QFDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAIRYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCADTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMG--QDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLILA 704 Q DY+I+G+GSAG +A RLSE+ + V+++EAG D P I +PA +A + +W + + +P L+NR+I PRGK +GGSSSIN +VY+RG ED+++W +LG GW Y DVLPYF + E++ G + + + G GPL V +NPL AF+ A QAG +D+NG Q+G G + T GRR SAA AYLKPA +R N+T+V N A KV++E RA GVE R G+ T A +EVI+SA + SP+LLMLSGIG A L GI+ + GVG NL DH+ S + +L S+ +G+A ++L ++ G SN E+ F +A + DIQ+HFLP+ + G A HG H + G + L A+P P+I ++ + R +++ R+I +A D E PG ++++DEQ+DA++R H E+ +HP GTC+MG D +AVVD ECRV G++ LRV D+SI P + GN N P +M GEKA+D IL Sbjct: 2 QADYVIVGSGSAGSAIAYRLSEDGRYSVIVIEAGGSDFGPFIQMPAALAWPMSMKRYNWGYLSEPEPNLDNRRITAPRGKVIGGSSSINGLVYVRGHAEDFNRWEELGAQGWAYADVLPYFKRMEHSHGGE--EGWRGTDGPLHVQRGPVSNPLFHAFIQAGAQAGFELTDDYNGSKQEGFGLMEQTIHNGRRWSAANAYLKPALKRGNVTLV-NGFARKVIIENGRAVGVEIERRGRVETVKANREVIVSASSFNSPKLLMLSGIGPAAHLKDMGIEVKADRPGVGANLQDHMEFYFQQVSTKPVSLYSWLPWFWQGVAGAQWLLSKGGLGASNQFEACAFLRSAPGLKQPDIQYHFLPVAISYDGKAAAKSHGFQAHVGYNLSKSRGNVTLRSADPHDDPVIRFNYMSHPEDWEKFRHCVRLTREIFGQKAFDDFRGPEIQPGENIETDEQIDAFLREHLESAYHPCGTCRMGDRNDPMAVVDPECRVIGVEGLRVADSSIFPHVTYGNLNGPSIMTGEKAADHILG 527
BLAST of choline dehydrogenase vs. nr
Match: gi|1268754702|ref|WP_099018731.1| (choline dehydrogenase [Marinicella litoralis]) HSP 1 Score: 572.392 bits (1474), Expect = 0.000e+0 Identity = 283/527 (53.70%), Postives = 367/527 (69.64%), Query Frame = 0 Query: 178 QFDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAIRYLATRNGPANSNAAESGGFYATALS-DGRADIQFHFLPIMVYPPGCADTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMGQDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLIL 703 +FDYI++GAGSAGCVLANRLS + + VLL+EAG D NP IH+PAG+A L+G S++W + T +P LNNR++ PRGK LGGSSSINAM Y RG R+DYD W GN GWG +DVLPYF+KSENN ++L FH G LSVSD YTNPLSD F+ AA +AG R +DFNG Q+G G YQVT G+R S A A+LKPA+ RSNLT+ T A KV+L+ +ATG+ + G+ A KEVILS+GAI SPQLLMLSGIG +E+LA HGIQC+H L GVGKNL DHL++ ++ QD T ++ + + L+ ++Y + GP SN AE+GGF+ + ++ D R D+QFHF+P M+ G +G TLH C LRP GEI+L ANP P I +L E +L +M EG KI RKI +++A + +E PGS VQ+DE++ +IR AE+ +HP+GTCKMG DD+AVVD +VHG++ LRVVDAS MPTL+SGNTNAP +M+ EK SD+I+ Sbjct: 3 KFDYIVVGAGSAGCVLANRLSADGKHTVLLVEAGGTDWNPMIHMPAGLAKLVGFKSINWNYDTEPEPQLNNRKLYWPRGKVLGGSSSINAMCYCRGHRKDYDHWEAQGNAGWGSKDVLPYFMKSENN--QRLKNEFHSQDGLLSVSDHIYTNPLSDVFLDAAAEAGYQRTDDFNGLRQRGFGYYQVTQKNGQRHSTAEAFLKPAKGRSNLTVWTKTLAQKVILKDKKATGLLVKKGGQLQQLKANKEVILSSGAINSPQLLMLSGIGNSEELAHHGIQCQHELPGVGKNLQDHLDVCLVQHCSQDITYDT----VNEVLSGLKYYLFKKGPGTSNVAEAGGFWQSPMAIDDRPDLQFHFVPAMLDDHGRNRLKGNGYTLHMCVLRPESRGEIKLKSANPEDPPQIQANYLAVEHDLKIMVEGFKIQRKIFAAKAFDEFRDDEIFPGSEVQTDEEIIDFIRNKAESIYHPIGTCKMGSDDMAVVDQNLKVHGIEGLRVVDASAMPTLVSGNTNAPTIMMAEKISDVII 523
BLAST of choline dehydrogenase vs. nr
Match: gi|1148670760|ref|WP_077410869.1| (choline dehydrogenase [Marinicella sp. F2]) HSP 1 Score: 565.459 bits (1456), Expect = 0.000e+0 Identity = 279/528 (52.84%), Postives = 362/528 (68.56%), Query Frame = 0 Query: 178 QFDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAIRYLATRNGPANSNAAESGGFYATALS-DGRADIQFHFLPIMVYPPGCADTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMGQDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLILA 704 +FDYI++GAGSAGCVLANRLS + RVLL+EAG+ D NP IH+PAG+A L+G S++W + T +P LNNR++ PRGK LGGSSSINAM Y RG R+DYD W +GNPGWG +DVLPYF+KSENN ++L FH G L VSD YTNPLSD F++AAE+ G R +DFNG Q+G G YQVT G+R S A A+LKPA++R NLT+ T A +V+L G +ATG+ + G++ A KEVILS GAI SPQLLMLSGIG+A++LA HGI C H L GVGKNL DHL++ ++ Q T ++ + + L+ ++Y + GP SN AE+GGF+ + + D R D+QFHF+P M+ G G TLH C LRP G+I L +P P I+ +L E +L +M EG KI R+I + + EE PGS VQ+DEQ+ +IR AE+ +HP+GTCKMG DD+AVVD +VHG++ LRVVDAS MPTL+SGNTNAP +M+ EK SD+IL Sbjct: 3 EFDYIVVGAGSAGCVLANRLSADQNNRVLLIEAGSTDWNPLIHMPAGLAKLVGIKSINWGYDTAPEPQLNNRRLYWPRGKVLGGSSSINAMCYCRGHRKDYDLWESMGNPGWGSKDVLPYFMKSENN--QRLQNEFHSGDGLLWVSDHIYTNPLSDVFLAAAEEVGYDRTDDFNGLRQRGFGYYQVTQKNGQRHSTAQAFLKPAKKRDNLTVWTKTMAEQVILTGKKATGLRVRKGGQSMAVKATKEVILSGGAINSPQLLMLSGIGQADELAVHGIDCVHELPGVGKNLQDHLDVCLVQRCTQKITYDT----VSEVLSGLKYYLFKEGPGTSNVAEAGGFWQSPQAQDDRPDLQFHFVPAMLDDHGRNRLKGSGYTLHMCVLRPESRGQITLKSTDPAEHPQIEANYLSAEQDLQLMIEGFKIQRRIFGAGSFDPFRDEEIFPGSEVQTDEQITEFIRNKAESIYHPIGTCKMGSDDMAVVDHNLQVHGIEGLRVVDASAMPTLVSGNTNAPTIMMAEKISDVILG 524
BLAST of choline dehydrogenase vs. nr
Match: gi|1309100912|gb|PKP76936.1| (choline dehydrogenase [Alphaproteobacteria bacterium HGW-Alphaproteobacteria-3]) HSP 1 Score: 548.895 bits (1413), Expect = 0.000e+0 Identity = 282/529 (53.31%), Postives = 348/529 (65.78%), Query Frame = 0 Query: 177 NQFDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLES-YQRGLQKGLAAIRYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCADTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMGQDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLILA 704 ++FDYIIIGAGSAGCVLANRLSENP +VLLLEAG+KD N IH+PAG+ L+G +WC+ T QP LNNR++ PRGK LGGSSSIN M+YIRG DYD WR LG GWG+ DVLPYF +SE N + D FHG GPL VS+ R TN L ++FV A +QAG DFNG Q+GVG YQ+T G+RCSAA YL PA R NL++ A S++L EG +A GVEY + G+T A A KEVILS GA+ SPQLL+LSG+G+ E L GI L GVG+NL DHL+ +V+ Q TL S L++ + ++Y + G A SN ESG F T DIQ HF+ M+ + RHG T+H C LRP G I L NP LI +L+ E + VMREG+KI R I+S +A+ + E+ PG+ QSD ++DA+IR AET +HPVGT KMG D +AVVDA+CRVHGLQ LRVVDAS+MPTL+ GNTNAP +MI EK SD IL Sbjct: 2 SEFDYIIIGAGSAGCVLANRLSENPSNKVLLLEAGSKDSNFMIHMPAGVGKLIGTDLANWCYDTEGQPFLNNRKLYWPRGKVLGGSSSINGMIYIRGHARDYDMWRQLGLEGWGFSDVLPYFRRSEGN--ENGDSAFHGGEGPLGVSNSRKTNVLFESFVEAGKQAGHPYTEDFNGPQQEGVGPYQLTIKDGQRCSAAKGYLVPALSRPNLSVEVEALTSRILFEGKKAVGVEYTQKGETKVARAGKEVILSGGAVNSPQLLLLSGVGKGEYLRKFGIDVVADLPGVGQNLQDHLDCTVIYECTQPITLHSTVSNPLKQLMTGMQYTFFKTGLATSNGLESGAFLKTRSELEVPDIQLHFVAAMMRDHARVKSDRHGFTVHVCQLRPESRGYIALKSPNPGDYALIQPNYLEAEYDRVVMREGVKIVRNIISQRAMDAYRGPEFWPGAGKQSDNEIDAWIRETAETIYHPVGTAKMGTDPMAVVDAKCRVHGLQGLRVVDASVMPTLVGGNTNAPTIMIAEKISDDILG 528
BLAST of choline dehydrogenase vs. nr
Match: gi|765295936|ref|WP_044623646.1| (choline dehydrogenase [Photobacterium gaetbulicola] >gi|764069075|gb|AJR09089.1| alcohol dehydrogenase [Photobacterium gaetbulicola Gung47]) HSP 1 Score: 544.658 bits (1402), Expect = 0.000e+0 Identity = 271/528 (51.33%), Postives = 363/528 (68.75%), Query Frame = 0 Query: 179 FDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAI-RYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCA--DTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMGQDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLIL 703 +D+II+GAGSAGCVLANRLS +P +V L+EAG KD +P +HVP GI ++ + ++W + T +P L NRQ+ PRGKTLGGSSS NAM YIRG DYD+W LGN GW Y++VLPYF KSE + ++ N+HG GPL VSD R NPLSDAF++AAEQAG + DFNG+ Q GVG YQVT G+RCS+AVA+L+PA +R NLT++T+A +KV++ +ATG+EY + G + AK+EVILS GAI SPQLLMLSG+G+ ++L HGI+ +H L GVGKNL DHL++ V+ + +++ L + + I Y R G +N AE+GGF ++ + D+QFHF P + G T +HG +LHAC+LRP G + LA A+PL P I +L ++ VM + +K++R+IL + + +E PG VQ+DEQL+A+IR AE+ +HPVGTCKMG D LAVVD VHG++ LRVVDASIMPTL+ GNTNAP +MIGEKA+D+IL Sbjct: 2 YDFIIVGAGSAGCVLANRLSSDPSLKVCLVEAGPKDSSPVVHVPLGIIGMMHSKKMNWRYYTEQEPNLGNRQLFWPRGKTLGGSSSSNAMCYIRGHASDYDEWAALGNKGWSYDEVLPYFRKSE--AQQRGADNYHGADGPLHVSDLRINNPLSDAFLTAAEQAGHQVSTDFNGKEQAGVGYYQVTQKNGQRCSSAVAFLRPAEQRPNLTVITDATTTKVVIHQGKATGIEYRKGGHNYKIKAKREVILSGGAINSPQLLMLSGVGDRKELETHGIEVKHHLPGVGKNLQDHLDVLVVTRERTFHSVGFSPIALTRAIKGIFDYFLFRKGNFTTNIAEAGGFAKSSPELDKPDVQFHFSPCYLDNHGLDLLQTVKHGYSLHACNLRPKSRGSLGLASADPLQPPRITANYLSHPEDIEVMLKAIKMSRQILQQEGFDHYRGKEVFPGKEVQTDEQLEAFIRRKAESIYHPVGTCKMGHDALAVVDERLCVHGIEGLRVVDASIMPTLVGGNTNAPTIMIGEKAADMIL 527
BLAST of choline dehydrogenase vs. nr
Match: gi|746419668|ref|WP_039460402.1| (choline dehydrogenase [Photobacterium gaetbulicola] >gi|741172418|gb|KHT64164.1| GMC family oxidoreductase [Photobacterium gaetbulicola]) HSP 1 Score: 544.273 bits (1401), Expect = 0.000e+0 Identity = 269/528 (50.95%), Postives = 364/528 (68.94%), Query Frame = 0 Query: 179 FDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAI-RYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCA--DTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMGQDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLIL 703 +D+II+GAGSAGCVLANRLS +P +V L+EAG KD +P +H+P GI ++ + ++W + T +P L NRQ+ PRGKTLGGSSS NAM YIRG DYD+W LGN GW Y++VLPYF KSE + ++ ++HG GPL VSD R NPLSDAF++AAEQAG + DFNG+ Q GVG YQVT G+RCS+AVA+L+PA +R NLT++T+A +KV+++ +ATG+EY + G + AK+EVILS GAI SPQLLMLSG+G+ ++L HGI+ +H L GVGKNL DHL++ V+ + +++ L + + I Y R G +N AE+GGF ++ + D+QFHF P + G T +HG +LHAC+LRP G + LA A+PL P I +L ++ VM + +K++R+IL + + +E PG VQ+DEQL+A+IR AE+ +HPVGTCKMG D LAVVD VHG++ LRVVDASIMPTL+ GNTNAP +MIGEKA+D+IL Sbjct: 2 YDFIIVGAGSAGCVLANRLSSDPSLKVCLVEAGPKDSSPVVHIPLGIIGMMHSKKMNWRYYTEQEPNLGNRQLFWPRGKTLGGSSSSNAMCYIRGHASDYDEWAALGNKGWSYDEVLPYFRKSE--AQQRGADDYHGADGPLHVSDLRINNPLSDAFLTAAEQAGHQVSTDFNGKEQAGVGYYQVTQKNGQRCSSAVAFLRPAEQRPNLTVITDATTTKVVIQQGKATGIEYRKGGHNYKIKAKREVILSGGAINSPQLLMLSGVGDRKELETHGIEVKHHLPGVGKNLQDHLDVLVVTRERTFHSVGFSPIALTRAIKGIFDYFLFRKGNFTTNIAEAGGFAKSSPELDKPDVQFHFSPCYLDNHGLDLLQTVKHGYSLHACNLRPKSRGSLGLASADPLQPPRITANYLSHPEDIEVMLKAIKMSRQILKQEGFDHYRGKEVFPGKEVQTDEQLEAFIRRKAESIYHPVGTCKMGHDALAVVDERLCVHGIEGLRVVDASIMPTLVGGNTNAPTIMIGEKAADMIL 527
BLAST of choline dehydrogenase vs. nr
Match: gi|1198840003|ref|WP_086958279.1| (choline dehydrogenase [Photobacterium damselae] >gi|1174819621|dbj|GAW45661.1| Alcohol dehydrogenase [acceptor] [Photobacterium damselae subsp. piscicida] >gi|1192782861|dbj|BAX53188.1| Alcohol dehydrogenase [acceptor] [Photobacterium damselae subsp. piscicida]) HSP 1 Score: 543.502 bits (1399), Expect = 0.000e+0 Identity = 277/529 (52.36%), Postives = 359/529 (67.86%), Query Frame = 0 Query: 179 FDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNS-GKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGL-AAIRYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCA--DTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMGQDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLIL 703 FDYII+GAGSAGCVLANRLS N +V L+EAG +D +P IHVP G+ ++ + ++W + T +PALN R++ PRGKTLGGSSS NAM YIRG DYD W LGN GW Y+DVLPYF K+E+ G+ + +HG GPL VS+ R NPLS AF+ AA+QAGL N+DFNG+ Q+G+G YQVT G+RCS+AVAYL+ A R NLTI+TNA +KVL++ A GVEY + G+ HA+KEVILS GAI SPQLLMLSGIGE E L AHGI+C L GVG+NL DHL+I V+ + +++ + + + A Y R G +N AE+GGF T + D+QFHF P + G T +HG +LHAC LRP G + L D+NP S P++ +L ++ VM +GLK++R+IL+ +A + +E PG V +D++L ++IR AE+ +HPVGTCKMG D AVVD+ RV G++ LRVVDASIMPTLI GNTNAP +MI EKASDLIL Sbjct: 2 FDYIIVGAGSAGCVLANRLSANSHNKVCLIEAGPQDKHPMIHVPLGLIGMMHSKVMNWRYYTEPEPALNERKLFWPRGKTLGGSSSSNAMCYIRGHASDYDHWASLGNAGWSYQDVLPYFRKAEHQEFGEDI---YHGSNGPLHVSELRIKNPLSQAFIKAAKQAGLRYNDDFNGQQQEGIGFYQVTQKNGQRCSSAVAYLREAETRDNLTIITNAMVNKVLIDNGVAVGVEYQQGGEIKAVHARKEVILSGGAINSPQLLMLSGIGEKEHLNAHGIECVADLPGVGQNLQDHLDILVVTRERTFHSVGFSPIAMLRAIKGAFDYWLFRQGNFTTNVAEAGGFLKTDDGLDKPDVQFHFSPCFLDNHGLDLLQTVKHGYSLHACCLRPKSRGVLMLRDSNPQSPPILQPNYLSHPDDIEVMLKGLKVSRQILAQKAFDHYRGKEAFPGKEVATDDELRSFIRQKAESIYHPVGTCKMGNDKAAVVDSCLRVRGVEQLRVVDASIMPTLIGGNTNAPTIMIAEKASDLIL 527
BLAST of choline dehydrogenase vs. nr
Match: gi|1175983297|gb|OQW92894.1| (GMC family oxidoreductase [Beggiatoa sp. IS2]) HSP 1 Score: 543.117 bits (1398), Expect = 0.000e+0 Identity = 282/527 (53.51%), Postives = 356/527 (67.55%), Query Frame = 0 Query: 179 FDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNSGKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGLAAIRYLATRNGPANSNAAESGGFYATALS-DGRADIQFHFLPIMVYPPGCADTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMGQDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLILA 704 + YII+GAGSAGCVLANRLSENP+ RVLLLEAG KD +P IH+PAG+A ++ S++W + T +P LNNR++ PRGK LGGSSSINAM Y RGQ EDYDQW LGNPGW Y +VLPYF K+EN ++ +HG GGPL+V D Y NPLS F+ AA G RN+DF+G Q+G+G YQVT G+RCSAAVAYL P + R NLTI+T + A KVL EG RA GVEY R + A A KEVILS GAI SP +L+LSGIG A+QL GI L GVGKNL DHL+ L + T +S R L++ I+Y R GP SN AE+GGF + L+ D R D+QFHFL ++ G +G+T+HAC LRP GE+ L A P +I +L + ++A+M G+K+AR+I + +L +E PG+ +DE + +IR AET +HPVGTCKMG DD AVVD E +V G+++LRVVDASIMPTL+SGNTNAP +MI EKA+DL+ A Sbjct: 2 YQYIIVGAGSAGCVLANRLSENPEVRVLLLEAGGKDWHPFIHMPAGLAKIINVKSINWHYYTEPEPNLNNRRMYWPRGKVLGGSSSINAMCYTRGQAEDYDQWAALGNPGWSYHEVLPYFKKAEN--CERGASEYHGVGGPLNVQDLLYKNPLSGLFIEAAASLGYPRNDDFSGAKQEGIGYYQVTQKNGQRCSAAVAYLNPIKNRPNLTILTKSLAHKVLFEGKRAIGVEYSRGRQITRALADKEVILSGGAINSPHVLLLSGIGPADQLKKVGIPVLQDLPGVGKNLQDHLDACTLYQCVKPITYDSI-RYLKEIPVGIQYYLFRKGPGTSNIAEAGGFVRSPLAKDTRPDVQFHFLSALLDDHGRNRINDNGMTIHACDLRPESRGELLLKSARPDDKVVIYANYLSTDKDMAMMVAGVKMAREIFHEPSFNPYLGKELFPGAQANTDEAIRDFIRRKAETIYHPVGTCKMGTDDQAVVDPELKVRGIEHLRVVDASIMPTLLSGNTNAPAIMIAEKAADLMKA 525
BLAST of choline dehydrogenase vs. nr
Match: gi|1057697673|ref|WP_068969243.1| (choline dehydrogenase [Photobacterium damselae] >gi|1055853637|gb|ODA22155.1| GMC family oxidoreductase [Photobacterium damselae subsp. damselae]) HSP 1 Score: 542.732 bits (1397), Expect = 0.000e+0 Identity = 277/529 (52.36%), Postives = 359/529 (67.86%), Query Frame = 0 Query: 179 FDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNS-GKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGL-AAIRYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCA--DTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMGQDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLIL 703 FDYII+GAGSAGCVLANRLS N +V L+EAG +D +P IHVP G+ ++ + ++W + T +PALN R++ PRGKTLGGSSS NAM YIRG DYD W LGN GW Y+DVLPYF K+E+ G+ + +HG GPL VS+ R NPLS AF+ AA+QAGL N+DFNG+ Q+GVG YQVT G+RCS+AVAYL+ A R NLTI+TNA +KVL++ A GVEY + G+ HA+KEVILS GAI SPQLLMLSGIG+ E L AHGI+C L GVG+NL DHL+I V+ + +++ + + + A Y R G +N AE+GGF T + D+QFHF P + G T +HG +LHAC LRP G + L D+NP S P++ +L ++ VM +GLK++R+IL+ +A + +E PG V +D++L ++IR AE+ +HPVGTCKMG D AVVD+ RV G++ LRVVDASIMPTLI GNTNAP +MI EKASDLIL Sbjct: 2 FDYIIVGAGSAGCVLANRLSANSHNKVCLIEAGPQDKHPMIHVPLGLIGMMHSKVMNWRYYTEPEPALNERKLFWPRGKTLGGSSSSNAMCYIRGHASDYDHWASLGNAGWSYQDVLPYFRKAEHQEFGEDI---YHGSNGPLHVSELRIKNPLSQAFIKAAKQAGLRYNDDFNGQQQEGVGFYQVTQKNGQRCSSAVAYLREAETRDNLTIITNAMVNKVLIDNGVAVGVEYQQGGEIKAVHARKEVILSGGAINSPQLLMLSGIGDKEHLNAHGIECVADLPGVGQNLQDHLDILVVTRERTFHSVGFSPIAMLRAIKGAFDYWLFRQGNFTTNVAEAGGFLKTDDELDKPDVQFHFSPCFLDNHGLDLLQTVKHGYSLHACCLRPKSRGVLMLRDSNPQSPPILQPNYLSHPDDIEVMLKGLKVSRQILAQKAFDHYRGKEAFPGKEVATDDELRSFIRQKAESIYHPVGTCKMGNDKAAVVDSCLRVRGVEQLRVVDASIMPTLIGGNTNAPTIMIAEKASDLIL 527
BLAST of choline dehydrogenase vs. nr
Match: gi|1361141713|ref|WP_106339451.1| (GMC family oxidoreductase [Photobacterium damselae] >gi|1360471557|gb|PSB88839.1| GMC family oxidoreductase [Photobacterium damselae subsp. damselae]) HSP 1 Score: 541.576 bits (1394), Expect = 0.000e+0 Identity = 277/529 (52.36%), Postives = 358/529 (67.67%), Query Frame = 0 Query: 179 FDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNS-GKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGL-AAIRYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCA--DTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMGQDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLIL 703 FDYII+GAGSAGCVLANRLS N +V L+EAG +D +P IHVP G+ ++ + ++W + T +PALN R++ PRGKTLGGSSS NAM YIRG DYD W LGN GW Y+DVLPYF K+E+ G+ + +HG GPL VS+ R NPLS AF+ AA+QAGL N+DFNG+ Q+GVG YQVT G+RCS+AVAYL+ A R NLTI+TNA +KVL++ A GVEY + G+ HA+KEVILS GAI SPQLLMLSGIG+ E L AHGI+C L GVG+NL DHL+I V+ + +++ + + + A Y R G +N AE+GGF T + D+QFHF P + G T +HG +LHAC LRP G + L D+NP S P++ +L ++ VM +GLK++R+IL+ +A + +E PG V +D++L ++IR AE+ +HPVGTCKMG D AVVD+ RV G+ LRVVDASIMPTLI GNTNAP +MI EKASDLIL Sbjct: 2 FDYIIVGAGSAGCVLANRLSANSHNKVCLIEAGPQDKHPMIHVPLGLIGMMHSKVMNWRYYTEPEPALNERKLFWPRGKTLGGSSSSNAMCYIRGHASDYDHWASLGNAGWSYQDVLPYFRKAEHQEFGEDI---YHGSNGPLHVSELRIKNPLSQAFIKAAKQAGLRYNDDFNGQQQEGVGFYQVTQKNGQRCSSAVAYLREAETRDNLTIITNAMVNKVLIDNGVAVGVEYQQGGEIKAVHARKEVILSGGAINSPQLLMLSGIGDKEHLNAHGIECVADLPGVGQNLQDHLDILVVTRERTFHSVGFSPIAMLRAIKGAFDYWLFRQGNFTTNVAEAGGFLKTDDELDKPDVQFHFSPCFLDNHGLDLLQTVKHGYSLHACCLRPKSRGVLMLRDSNPQSPPILQPNYLSHPDDIEVMLKGLKVSRQILAQKAFDHYRGKEAFPGKEVATDDELRSFIRQKAESIYHPVGTCKMGNDKSAVVDSCLRVRGIDQLRVVDASIMPTLIGGNTNAPTIMIAEKASDLIL 527
BLAST of choline dehydrogenase vs. nr
Match: gi|1057671499|ref|WP_068946783.1| (choline dehydrogenase [Photobacterium damselae] >gi|1055854628|gb|ODA23050.1| GMC family oxidoreductase [Photobacterium damselae subsp. damselae]) HSP 1 Score: 541.576 bits (1394), Expect = 0.000e+0 Identity = 277/529 (52.36%), Postives = 358/529 (67.67%), Query Frame = 0 Query: 179 FDYIIIGAGSAGCVLANRLSENPQRRVLLLEAGNKDHNPSIHVPAGIADLLGNASVDWCFKTTAQPALNNRQIDIPRGKTLGGSSSINAMVYIRGQREDYDQWRDLGNPGWGYEDVLPYFIKSENNS-GKQLDKNFHGHGGPLSVSDRRYTNPLSDAFVSAAEQAGLSRNNDFNGETQQGVGRYQVTHVAGRRCSAAVAYLKPARRRSNLTIVTNAHASKVLLEGTRATGVEYLRNGKTHTAHAKKEVILSAGAIASPQLLMLSGIGEAEQLAAHGIQCEHVLAGVGKNLYDHLNISVLAFSKQDNTLESYQRGLQKGL-AAIRYLATRNGPANSNAAESGGFYATALSDGRADIQFHFLPIMVYPPGCA--DTGRHGVTLHACHLRPTDVGEIRLADANPLSAPLIDNQFLQREGNLAVMREGLKIARKILSSQALADHLAEEYCPGSSVQSDEQLDAYIRAHAETEFHPVGTCKMGQDDLAVVDAECRVHGLQNLRVVDASIMPTLISGNTNAPCMMIGEKASDLIL 703 FDYII+GAGSAGCVLANRLS N +V L+EAG +D +P IHVP G+ ++ + ++W + T +PALN R++ PRGKTLGGSSS NAM YIRG DYD W LGN GW Y+DVLPYF K+E+ G+ + +HG GPL VS+ R NPLS AF+ AA+QAGL N+DFNG+ Q+GVG YQVT G+RCS+AVAYL+ A R NLTI+TNA +KVL++ A GVEY + G+ HA+KEVILS GAI SPQLLMLSGIG+ E L AHGI+C L GVG+NL DHL+I V+ + +++ + + + A Y R G +N AE+GGF T + D+QFHF P + G T +HG +LHAC LRP G + L D+NP S P++ +L ++ VM +GLK++R+IL+ +A + +E PG V +D++L ++IR AE+ +HPVGTCKMG D AVVD+ RV G+ LRVVDASIMPTLI GNTNAP +MI EKASDLIL Sbjct: 2 FDYIIVGAGSAGCVLANRLSANSHNKVCLIEAGPQDKHPMIHVPLGLIGMMHSKVMNWRYYTEPEPALNERKLFWPRGKTLGGSSSSNAMCYIRGHASDYDHWASLGNAGWSYQDVLPYFRKAEHQEFGEDI---YHGSNGPLHVSELRIKNPLSQAFIKAAKQAGLRYNDDFNGQQQEGVGFYQVTQKNGQRCSSAVAYLREAETRDNLTIITNAMVNKVLIDNGVAVGVEYQQGGEIKAVHARKEVILSGGAINSPQLLMLSGIGDKEHLNAHGIECVADLPGVGQNLQDHLDILVVTRERTFHSVGFSPIAMLRAIKGAFDYWLFRQGNFTTNVAEAGGFLKTDDELDKPDVQFHFSPCFLDNHGLDLLQTVKHGYSLHACCLRPKSRGVLMLRDSNPQSPPILQPNYLSHPDDIEVMLKGLKVSRQILAQKAFDHYRGKEAFPGKEVATDDELRSFIRQKAESIYHPVGTCKMGNDKAAVVDSCLRVRGVDQLRVVDASIMPTLIGGNTNAPTIMIAEKASDLIL 527 The following BLAST results are available for this feature:
BLAST of choline dehydrogenase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 5
BLAST of choline dehydrogenase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of choline dehydrogenase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold7610_size3089:476..3058+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold7610_size3089-snap-gene-0.2 ID=maker-scaffold7610_size3089-snap-gene-0.2|Name=choline dehydrogenase|organism=Tigriopus kingsejongensis|type=gene|length=2583bp|location=Sequence derived from alignment at scaffold7610_size3089:476..3058+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'choline dehydrogenase' has the following synonyms
Add to Basket
|