zygotic gap protein knirps, maker-scaffold80_size398941-snap-gene-2.18 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of zygotic gap protein knirps vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7") HSP 1 Score: 207.223 bits (526), Expect = 5.383e-66 Identity = 89/105 (84.76%), Postives = 98/105 (93.33%), Query Frame = 0 Query: 29 CVDPLQNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQHEGRES 133 +DP+QNQLCRVC+EPAAG+HFGAFTCEGCKSFFGRTCNNQS+I +CKNNY+CVVDKKNRTACKACRLRKC++VGMSKSGSRYGRRSNWFKIHCLMQQ G S Sbjct: 48 AMDPMQNQLCRVCEEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCVVDKKNRTACKACRLRKCIMVGMSKSGSRYGRRSNWFKIHCLMQQNLGGNNS 152
BLAST of zygotic gap protein knirps vs. L. salmonis genes
Match: EMLSAG00000005620 (supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1 gene:EMLSAG00000005620 transcript:EMLSAT00000005620 description:"maker-LSalAtl2s301-augustus-gene-5.4") HSP 1 Score: 175.637 bits (444), Expect = 1.218e-56 Identity = 77/96 (80.21%), Postives = 88/96 (91.67%), Query Frame = 0 Query: 31 DPLQNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTC--NNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLM 124 DP++NQ+CRVC EPAAGYHFGAFTCEGCKSFFGRTC +N + I +CKNNY CV+DKKNRT+CKACRLRKCL VGMSK+GSRYGRRSNWFK+HC+M Sbjct: 31 DPMRNQICRVCDEPAAGYHFGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCKACRLRKCLRVGMSKAGSRYGRRSNWFKMHCVM 126
BLAST of zygotic gap protein knirps vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5") HSP 1 Score: 78.5666 bits (192), Expect = 8.720e-18 Identity = 36/80 (45.00%), Postives = 51/80 (63.75%), Query Frame = 0 Query: 37 LCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSN 116 LC VC + ++G H+G FTCEGCKSFF R C +S+ C++ C VD+ +R C+ CR +KCL +GM K + GR + Sbjct: 74 LCVVCGDKSSGKHYGQFTCEGCKSFFKR-CVRRSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKEAVQKGRTTT 152
BLAST of zygotic gap protein knirps vs. L. salmonis genes
Match: EMLSAG00000008902 (supercontig:LSalAtl2s:LSalAtl2s554:572309:581835:1 gene:EMLSAG00000008902 transcript:EMLSAT00000008902 description:"maker-LSalAtl2s554-snap-gene-5.6") HSP 1 Score: 77.7962 bits (190), Expect = 1.667e-17 Identity = 35/78 (44.87%), Postives = 46/78 (58.97%), Query Frame = 0 Query: 36 QLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGR 113 +LC VC + +GYH+G TCE CK FF RT N+ ++ C + CV+DK R C CR +KCL VGM R+ R Sbjct: 184 ELCPVCGDKVSGYHYGLLTCESCKGFFKRTVQNKK-VYTCVADRSCVIDKTQRKRCPYCRFQKCLDVGMKLEAVRHDR 260
BLAST of zygotic gap protein knirps vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7") HSP 1 Score: 75.485 bits (184), Expect = 1.022e-16 Identity = 33/80 (41.25%), Postives = 53/80 (66.25%), Query Frame = 0 Query: 34 QNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGR 113 Q+ C VC + ++G H+G FTCEGCKSFF R+ +++ + C+ + C +D+ +R C+ CRL+KC+ +GM K + GR Sbjct: 430 QDISCVVCGDKSSGKHYGQFTCEGCKSFFKRSV-RRALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGMRKEAVQRGR 508
BLAST of zygotic gap protein knirps vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23") HSP 1 Score: 75.485 bits (184), Expect = 1.061e-16 Identity = 32/71 (45.07%), Postives = 47/71 (66.20%), Query Frame = 0 Query: 38 CRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSG 108 C+VC + ++G H+G TCEGCK FF R+ + + + C C+VD+ NR C+ CRL+KCL +GMS+ G Sbjct: 47 CKVCGDKSSGVHYGVITCEGCKGFFRRS-QSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRDG 116
BLAST of zygotic gap protein knirps vs. L. salmonis genes
Match: EMLSAG00000008543 (supercontig:LSalAtl2s:LSalAtl2s527:163002:172818:1 gene:EMLSAG00000008543 transcript:EMLSAT00000008543 description:"maker-LSalAtl2s527-augustus-gene-1.53") HSP 1 Score: 74.7146 bits (182), Expect = 2.140e-16 Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 0 Query: 32 PLQNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGR 113 P Q+ +C +C++ A G H+G TCEGCK FF RT N+ I+ C + +C ++K R C+ CR +KCL GM + R R Sbjct: 277 PQQSLVCMICEDRATGLHYGIITCEGCKGFFKRTVQNKR-IYTCVADGECEINKAQRNRCQYCRFQKCLQKGMVLAAVREDR 357
BLAST of zygotic gap protein knirps vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11") HSP 1 Score: 73.9442 bits (180), Expect = 3.086e-16 Identity = 32/76 (42.11%), Postives = 50/76 (65.79%), Query Frame = 0 Query: 38 CRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGR 113 C VC + ++G H+G FTCEGCKSFF R+ +++ + C+ + C VD+ +R C+ CRL+KC +GM + + GR Sbjct: 83 CVVCGDKSSGKHYGQFTCEGCKSFFKRSV-RRNLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMRREAVQRGR 157
BLAST of zygotic gap protein knirps vs. L. salmonis genes
Match: EMLSAG00000001919 (supercontig:LSalAtl2s:LSalAtl2s132:616435:622808:1 gene:EMLSAG00000001919 transcript:EMLSAT00000001919 description:"augustus_masked-LSalAtl2s132-processed-gene-6.5") HSP 1 Score: 73.9442 bits (180), Expect = 3.586e-16 Identity = 30/71 (42.25%), Postives = 44/71 (61.97%), Query Frame = 0 Query: 36 QLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSK 106 C +C + A+G H+G ++CEGCK FF RT + + + C+ N CV+DK+ R C+ CR KCL GM + Sbjct: 89 HFCSICGDRASGKHYGVYSCEGCKGFFKRTVRKE-LTYACRENRDCVIDKRQRNRCQYCRYMKCLDTGMKR 158
BLAST of zygotic gap protein knirps vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10") HSP 1 Score: 73.559 bits (179), Expect = 5.429e-16 Identity = 34/80 (42.50%), Postives = 51/80 (63.75%), Query Frame = 0 Query: 34 QNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGR 113 Q + C VC + A+G+H+G +CE CK+FF RT +I + + +C ++K+ R AC+ACR +KCL +GM K G R R Sbjct: 267 QRRTCLVCGDIASGFHYGVSSCEACKAFFKRTIQG-NIEYTXPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDR 345
BLAST of zygotic gap protein knirps vs. SwissProt
Match: gi|12230055|sp|Q9QZJ5.1|ESR1_MESAU (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 85.5001 bits (210), Expect = 1.109e-18 Identity = 44/118 (37.29%), Postives = 64/118 (54.24%), Query Frame = 0 Query: 34 QNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQHEGRESPSKPVEPKSINKSSSAMV 151 + + C VC + A+GYH+G ++CEGCK+FF R+ + + C +C +DK R +C+ACRLRKC VGM K G R RR H + EGR + ++ N S +V Sbjct: 181 ETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHND-YMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDLEGRNDMGPSGDMRATNLWPSPLV 297
BLAST of zygotic gap protein knirps vs. SwissProt
Match: gi|6015119|sp|Q91250.1|ESR1_TAEGU (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 85.5001 bits (210), Expect = 1.137e-18 Identity = 45/133 (33.83%), Postives = 71/133 (53.38%), Query Frame = 0 Query: 34 QNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQHEGRESPSKPVEPKSINKSSSAMVQAPMAPTTESERGPS 166 + + C VC + A+GYH+G ++CEGCK+FF R+ + + C +C +DK R +C+ACRLRKC VGM K G R RR +M+Q+ + E S+ E S + + +P+ + P+ Sbjct: 173 ETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHND-YMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGG-----RVMKQKRQREEQDSRNGEASSTELRAPTLWASPLVVKHNKKNSPA 299
BLAST of zygotic gap protein knirps vs. SwissProt
Match: gi|544257|sp|P03372.2|ESR1_HUMAN (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 85.5001 bits (210), Expect = 1.209e-18 Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 34 QNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQHEGR 131 + + C VC + A+GYH+G ++CEGCK+FF R+ + + C +C +DK R +C+ACRLRKC VGM K G R RR H + EGR Sbjct: 181 ETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHND-YMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDGEGR 277
BLAST of zygotic gap protein knirps vs. SwissProt
Match: gi|12230056|sp|Q9TV98.1|ESR1_HORSE (RecName: Full=Estrogen receptor; Short=ER; AltName: Full=ER-alpha; AltName: Full=Estradiol receptor; AltName: Full=Nuclear receptor subfamily 3 group A member 1) HSP 1 Score: 85.1149 bits (209), Expect = 1.370e-18 Identity = 41/98 (41.84%), Postives = 57/98 (58.16%), Query Frame = 0 Query: 34 QNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQHEGR 131 + + C VC + A+GYH+G ++CEGCK+FF R+ + + C +C +DK R +C+ACRLRKC VGM K G R RR H + EGR Sbjct: 181 ETRYCAVCNDYASGYHYGVWSCEGCKAFFKRSIQGHND-YMCPATNQCTIDKNRRKSCQACRLRKCYEVGMMKGGIRKDRRGGRMLKHKRQRDDGEGR 277
BLAST of zygotic gap protein knirps vs. SwissProt
Match: gi|215274146|sp|P11474.3|ERR1_HUMAN (RecName: Full=Steroid hormone receptor ERR1; AltName: Full=Estrogen receptor-like 1; AltName: Full=Estrogen-related receptor alpha; Short=ERR-alpha; AltName: Full=Nuclear receptor subfamily 3 group B member 1) HSP 1 Score: 84.3445 bits (207), Expect = 1.790e-18 Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = 0 Query: 27 KTCVDPLQNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGR 113 K + L +LC VC + A+GYH+G +CE CK+FF RT SI + C + +C + K+ R AC+ACR KCL VGM K G R R Sbjct: 68 KLVLSSLPKRLCLVCGDVASGYHYGVASCEACKAFFKRTIQG-SIEYSCPASNECEITKRRRKACQACRFTKCLRVGMLKEGVRLDR 153
BLAST of zygotic gap protein knirps vs. nr
Match: gi|657600396|gb|AID52859.1| (knirps [Tigriopus japonicus]) HSP 1 Score: 204.912 bits (520), Expect = 8.838e-63 Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 0 Query: 31 DPLQNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQ 126 DPLQNQLCRVC EPAAGYHFGAFTCEGCKSFFGRTCNNQSI+ DCKN++KCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQ Sbjct: 43 DPLQNQLCRVCHEPAAGYHFGAFTCEGCKSFFGRTCNNQSIVQDCKNSFKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQ 138
BLAST of zygotic gap protein knirps vs. nr
Match: gi|1325276629|ref|XP_023322962.1| (nuclear receptor ROR-alpha-like [Eurytemora affinis]) HSP 1 Score: 204.912 bits (520), Expect = 5.312e-62 Identity = 88/97 (90.72%), Postives = 96/97 (98.97%), Query Frame = 0 Query: 30 VDPLQNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQ 126 +DPLQNQLCRVC+EPAAG+HFGAFTCEGCKSFFGRTCNNQS+I +CKN+Y+CVVDKKNRTACKACRLRKCL+VGMSKSGSRYGRRSNWFKIHCLMQQ Sbjct: 39 IDPLQNQLCRVCEEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNSYRCVVDKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWFKIHCLMQQ 135
BLAST of zygotic gap protein knirps vs. nr
Match: gi|657600398|gb|AID52860.1| (knirps [Tigriopus japonicus]) HSP 1 Score: 206.453 bits (524), Expect = 9.221e-62 Identity = 97/154 (62.99%), Postives = 112/154 (72.73%), Query Frame = 0 Query: 30 VDPLQNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQ--------HEGRESPSKPVEPKSINK----SSSAMVQAPMAPTTESERGPSPDDLV 171 +DP+QNQLCRVC EPAAG+HFGAFTCEGCKSFFGRTCNNQS+I +CKNNY+C ++KKNRT CKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQ H G P+ P S++ +S + +P E PSP + Sbjct: 33 LDPMQNQLCRVCNEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCEINKKNRTTCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQANGGPAGSHAGSSGSLPPILPASMHTPMSMTSPTLTTSPSGLWRPQEPSPSPRSAI 186
BLAST of zygotic gap protein knirps vs. nr
Match: gi|657600394|gb|AID52858.1| (knirps [Tigriopus japonicus]) HSP 1 Score: 206.068 bits (523), Expect = 9.357e-62 Identity = 88/97 (90.72%), Postives = 96/97 (98.97%), Query Frame = 0 Query: 30 VDPLQNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQ 126 +DP+QNQLCRVC+EPAAG+HFGAFTCEGCKSFFGRTCNNQS+I +CKNNY+CVVDKKNRTACKACRLRKCL+VGMSKSGSRYGRRSNWFKIHCLMQQ Sbjct: 36 LDPMQNQLCRVCEEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCVVDKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWFKIHCLMQQ 132
BLAST of zygotic gap protein knirps vs. nr
Match: gi|1325276684|ref|XP_023322991.1| (protein embryonic gonad-like [Eurytemora affinis]) HSP 1 Score: 199.904 bits (507), Expect = 3.247e-60 Identity = 87/95 (91.58%), Postives = 94/95 (98.95%), Query Frame = 0 Query: 30 VDPLQNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLM 124 VDPLQNQLCRVC+EPAAG+HFGAFTCEGCKSFFGRTCNNQS+I +CKN+Y+CVVDKKNRTACKACRLRKCL+VGMSKSGSRYGRRSNWFKIHCLM Sbjct: 22 VDPLQNQLCRVCEEPAAGFHFGAFTCEGCKSFFGRTCNNQSVIQECKNSYRCVVDKKNRTACKACRLRKCLMVGMSKSGSRYGRRSNWFKIHCLM 116
BLAST of zygotic gap protein knirps vs. nr
Match: gi|1325276682|ref|XP_023322990.1| (nuclear receptor subfamily 1 group D member 1-like [Eurytemora affinis]) HSP 1 Score: 196.052 bits (497), Expect = 9.966e-60 Identity = 85/109 (77.98%), Postives = 98/109 (89.91%), Query Frame = 0 Query: 30 VDPLQNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQHEGRESPSKPV 138 +DPL+NQLCRVC+EPAAG+HFGAFTCEGCKSFFGR+CNNQ++I +CKN+Y+CVVD+KNRTACKACRLRKCLLVGMSKSG RYGRRSNWFKIHCLMQ+ S P+ Sbjct: 24 IDPLENQLCRVCEEPAAGFHFGAFTCEGCKSFFGRSCNNQTVIQECKNSYRCVVDRKNRTACKACRLRKCLLVGMSKSGCRYGRRSNWFKIHCLMQKNVTKISSAPYPI 132
BLAST of zygotic gap protein knirps vs. nr
Match: gi|1325276690|ref|XP_023322994.1| (zygotic gap protein knirps-like [Eurytemora affinis]) HSP 1 Score: 184.496 bits (467), Expect = 3.579e-55 Identity = 84/116 (72.41%), Postives = 99/116 (85.34%), Query Frame = 0 Query: 30 VDPLQNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQHEG--RESPSKPVEPKSI 143 +DP++NQLCRVC+E AAG+HFGAFTCEGCKSFFGR CNNQ+ I DCKN++KCV+DK+NRT+CKACRLRKCL VGMSKSG RYGRRSNWFKIHCLMQ+ E ++ PS P S+ Sbjct: 22 MDPMENQLCRVCEEKAAGFHFGAFTCEGCKSFFGRFCNNQTNIPDCKNSFKCVIDKRNRTSCKACRLRKCLSVGMSKSGCRYGRRSNWFKIHCLMQKNAEKSVKQEPSVHSAPSSL 137
BLAST of zygotic gap protein knirps vs. nr
Match: gi|225711358|gb|ACO11525.1| (Zygotic gap protein knirps [Caligus rogercresseyi]) HSP 1 Score: 180.644 bits (457), Expect = 2.310e-54 Identity = 82/117 (70.09%), Postives = 97/117 (82.91%), Query Frame = 0 Query: 31 DPLQNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTC--NNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQHEGRESPSKPVEPKSINK 145 DPL+NQ+CRVC EPAAGYHFGAFTCEGCKSFFGRTC +N + I +CKNNY CV+DKKNRT+CKACRLRKCL VGMSK+GSRYGRRSNWFK+HC+M ++G + S K I++ Sbjct: 38 DPLRNQICRVCDEPAAGYHFGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCKACRLRKCLRVGMSKAGSRYGRRSNWFKMHCVMSGSNKGNSAASVVAGSKGISR 154
BLAST of zygotic gap protein knirps vs. nr
Match: gi|1279718333|ref|XP_022903645.1| (zygotic gap protein knirps-like [Onthophagus taurus]) HSP 1 Score: 181.415 bits (459), Expect = 1.339e-53 Identity = 79/95 (83.16%), Postives = 89/95 (93.68%), Query Frame = 0 Query: 35 NQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQHE 129 NQLC+VC EPAAG+HFGAFTCEGCKSFFGRT NN+S I +CKNN KCV++KKNRTACKACRLRKC+LVGMSKSGSRYGRRSNWFKIHCL+Q+Q + Sbjct: 2 NQLCKVCGEPAAGFHFGAFTCEGCKSFFGRTYNNRSSISECKNNDKCVINKKNRTACKACRLRKCILVGMSKSGSRYGRRSNWFKIHCLLQEQQQ 96
BLAST of zygotic gap protein knirps vs. nr
Match: gi|939256784|ref|XP_014248190.1| (nuclear receptor subfamily 1 group D member 1-like [Cimex lectularius]) HSP 1 Score: 177.948 bits (450), Expect = 1.969e-53 Identity = 81/105 (77.14%), Postives = 92/105 (87.62%), Query Frame = 0 Query: 33 LQNQLCRVCQEPAAGYHFGAFTCEGCKSFFGRTCNNQSIIHDCKNNYKCVVDKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLMQQQHEGRESPSKP 137 + NQLCRVC EPAAG+HFGAFTCEGCKSFFGRT NN S I +CKNN +CV++KKNRT+CKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCL+Q+Q +P+ P Sbjct: 5 IMNQLCRVCGEPAAGFHFGAFTCEGCKSFFGRTYNNLSSISECKNNGECVINKKNRTSCKACRLRKCLLVGMSKSGSRYGRRSNWFKIHCLLQEQGGSGGAPTPP 109 The following BLAST results are available for this feature:
BLAST of zygotic gap protein knirps vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 22
Pagesback to top
BLAST of zygotic gap protein knirps vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
Pagesback to top
BLAST of zygotic gap protein knirps vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold80_size398941:348079..353796+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold80_size398941-snap-gene-2.18 ID=maker-scaffold80_size398941-snap-gene-2.18|Name=zygotic gap protein knirps|organism=Tigriopus kingsejongensis|type=gene|length=5718bp|location=Sequence derived from alignment at scaffold80_size398941:348079..353796+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'zygotic gap protein knirps' has the following synonyms
Add to Basket
|