chitin synthase, maker-scaffold84_size396325-snap-gene-2.42 (gene) Tigriopus kingsejongensis

Overview
Namechitin synthase
Unique Namemaker-scaffold84_size396325-snap-gene-2.42
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
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BLAST of chitin synthase vs. nr
Match: gi|1160524469|gb|AQZ26762.1| (chitin synthase 2-1 [Tigriopus japonicus])

HSP 1 Score: 94.3597 bits (233), Expect = 3.373e-20
Identity = 50/107 (46.73%), Postives = 72/107 (67.29%), Query Frame = 0 
Query:    1 LDLEMQFKRRLSSIQLDNPNNHIARRLSMRRETVDLFERRKSVSFLGQERRGSAMMERRMSQMSSMDMSLDPGVVNEGMESDDSFSDGVYASNSGSLNFETIHDEDE 107
            LDL+   KRRLS+++ ++P   + RRLS+ +E   +FERRKS +      R  +M+ERR S++    MS+DPG+VN GM +DD +SDG Y SN  S++FETI  ED+
Sbjct: 1493 LDLQADIKRRLSAVEFNDP---VMRRLSVSKEAASVFERRKSFATEQALIRRQSMVERRNSKLR---MSMDPGIVNGGMVNDDDYSDGTYGSNP-SVHFETIPYEDD 1592
The following BLAST results are available for this feature:
BLAST of chitin synthase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of chitin synthase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of chitin synthase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 1
Match NameE-valueIdentityDescription
gi|1160524469|gb|AQZ26762.1|3.373e-2046.73chitin synthase 2-1 [Tigriopus japonicus][more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold84_size396325supercontigscaffold84_size396325:345826..346389 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold84_size396325-snap-gene-2.42-mRNA-1maker-scaffold84_size396325-snap-gene-2.42-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold84_size396325:345826..346389+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold84_size396325-snap-gene-2.42 ID=maker-scaffold84_size396325-snap-gene-2.42|Name=chitin synthase|organism=Tigriopus kingsejongensis|type=gene|length=564bp|location=Sequence derived from alignment at scaffold84_size396325:345826..346389+ (Tigriopus kingsejongensis)
CAGAACGATGCCCCCTTGGATCTGGAGATGCAGTTCAAGCGGCGACTTTC
ATCCATTCGTGAGTGTCAATTAGGATTTCGATGAGGAGGGACATTGCTGA
AAGAGCCTCTTGAACATCCTTTCAGAGTTGGACAACCCCAATAATCATAT
TGCTCGCCGACTCTCAATGCGAAGAGAGACAGTCGACTTGTTCGAGCGAC
GAAAGAGCGTCTCATTCCTTGGCCAAGAGCGAAGAGGATCGGCCATGATG
GAACGCCGCATGTCTCAGATGAGCAGCATGGACATGAGTTTGGATCCGGT
GAGGCAATTGTGTTCAAATTTCATTGGGACTGAAAGGTAACCAATGTGCA
CTTTCTAACTGATTTTTAGGGCGTGGTGAATGAGGGCATGGAGTCAGACG
ACAGCTTCTCAGATGGAGTCTACGCTAGCAACAGTGGCTCACTAAATTTT
GAAACCATTCACGATGAGGACGAGTACAACACCGAGTTGTAGACTGGGGG
ATTTTAGAACCTGATGATGTATGTGTGCTGAATGTGTCAATAAATCAAAT
GTACGTAAGAAAAA
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Synonyms
The feature 'chitin synthase' has the following synonyms
Synonym
Tk09687
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