abc subfamily abcd, maker-scaffold87_size395581-snap-gene-2.14 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000005788 (supercontig:LSalAtl2s:LSalAtl2s3118:3124:4893:1 gene:EMLSAG00000005788 transcript:EMLSAT00000005788 description:"augustus_masked-LSalAtl2s3118-processed-gene-0.0") HSP 1 Score: 402.134 bits (1032), Expect = 5.955e-128 Identity = 233/591 (39.42%), Postives = 342/591 (57.87%), Query Frame = 0 Query: 66 NWTFIQRLAKLHRFLFPSWASATLILIVILLIVRGV---EEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGY-VDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIFDTSSS-------------DESKEHGTTAIDLPRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLY----PLDAELVALTIEQESTIID-MFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITC-----VSVGHRKTLNEYHQKILRI 629 NW R+ KLH + S LI I + + + GV E+Y+GY GL++ A+ ++L +KD + F S G+IL I+VV T+R+++ +++ V RR LT + LY ++Y VNVL + +DN DQR+T+D+ TFC+ Y +++ LII+PF I +Y +DA TR+GW+GP G+F++F++ VN FLMSP+ EK EGDFR+KH LR +E +AF + +E KT + L L + Q +Y + L+L+ F Y+G+I SYL+IA+P+F GFYD LD L IS+NSFVCM LIY S+LV++ + M G THR+ EL+EI + +S D+ T I+L L + +P R LI +L+L+I G +LITG SS GK+SLLR IRGLW +GSI + S+ F+ Q+ +T+GSL ++Y P+ +L + +D ++K D+F R W D+LSPGE+QR+ FIR+F+H P V LDEST++L +E LYE L ITC +SVGHR +L +YH K L++ Sbjct: 16 NWKLFVRIGKLHAII-----SRNLINIFVTICLLGVCILEQYVGYKTGLVAGAFXEVLLNKDTEGFKTTAIHSFGVILGIAVVKTVRMYVAKILSVFWRRTLTTNLHNLYFDADSYYKVNVLIKELGLDNPDQRMTSDVDTFCLVYGEMIARLIISPFTIGFYTWDAYTRSGWIGPVGVFIYFILGCFVNLFLMSPVSQRVFFMEKNEGDFRFKHMFLREKAEEIAFSNSAIIESIKTNKLLKSLIKSQLSVYTWEILLDLWINIFDYVGAIISYLIIAVPVFTGFYDSLDQAKLGNQISQNSFVCMTLIYNLSQLVDLASKFANMAGVTHRMIELVEILEKHNSNPCFFKDNAICTNDKDPHMFETMINLENIILK-------IPSPTTPRVLIDNLNLNIKTGDRILITGASSSGKTSLLRLIRGLWPTVEGSISFFTD-SIEFLSQRPLMTDGSLLQNMIYPSEXPISPDLTWFKDQLTRFNLDHLYKQYDLFQYQNR------------WEDILSPGEMQRICFIRVFYHRPQVVLLDESTASLPTNIEAMLYEY---LIITCPKITILSVGHRDSLRKYHMKELQL 578
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000005996 (supercontig:LSalAtl2s:LSalAtl2s324:163173:165128:-1 gene:EMLSAG00000005996 transcript:EMLSAT00000005996 description:"maker-LSalAtl2s324-augustus-gene-1.35") HSP 1 Score: 357.451 bits (916), Expect = 4.500e-111 Identity = 217/584 (37.16%), Postives = 331/584 (56.68%), Query Frame = 0 Query: 64 GFNWTFIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITR--AGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAF--QSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIFDTSSSDESKEHGTTAIDLP-----------RPGLAFKLSHVTVTAPGLDR-SLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDM-FKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCS-ELAITCVSVGHRKTLNEYHQKILRI 629 GFN F+ R L +F + L +I++L+ +E+ + Y +G+I + + L +D FV+ +SL ++ +++V++ RI E++ V+ RR LT + LY N FY + + DN DQRI +D Y ++S+++++PF+I+YY YD+ +G GP +F FF+ T +NK L++P++N E KEGDFR+KHA +R SE LAF Q + E + L LC QR+L LNL F Y SI SYL++ IP++ GFY L+ +LS +ISE +FV + LI +FS+LV++ VS + THR+ E +E + K+ A P LS++++ P + R +L+ +L+L++ +G NLLITG SSCGK+SLLR +RGLWN GS + +V+F+ QK F TNGSL+ QV YPL+ + +++ +Q I M + + +R +LD +PD +W ++LSPGE QR+A IR HSP + LDE+TSALSL ME Y + S IT +SVGHR +L ++H K L+I Sbjct: 13 GFNLQFLHRFWHLQSLIFTDRINIGLAIIILLICS--LEQLVMYKIGMIPGQFIRALVSEDESKFVRAIVLSLIIVCFMTLVLSARILTSELLSVSWRRSLTRCLHSLYFFNTGFYTLKL------DNPDQRIASDAECLVSIYGQILSEILLSPFVISYYIYDSYRGRGSGPYGPLIIFGFFLFGTFINKTLLTPVVNSGVEVRSKEGDFRFKHAEIRSQSESLAFLGQMGSFAEASRVDHLLEILCEAQRKLVLATYRLNLATNFFDYGASIISYLIVGIPVYNGFYKGLNVEELSGIISETAFVNIMLISKFSRLVDLAGKVSRLASVTHRVAEFVEKLSQEKIKDLKDFDNHAESSPLLMNDSDDSSVSDETVLTLSNLSIGLPDISRKTLVSNLNLELKIGDNLLITGSSSCGKTSLLRVLRGLWNEKSGS-YKFGRKTVIFISQKPFFTNGSLRRQVTYPLEV-VSSVSHDQFDIWIKMKLIKFGLGDLIDRVNGNLDAEPDKSWSEILSPGETQRMAIIRSLFHSPEILILDEATSALSLDMEELCYREVSYNNLITLISVGHRDSLKKFHSKHLQI 586
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12") HSP 1 Score: 63.1586 bits (152), Expect = 3.590e-10 Identity = 83/370 (22.43%), Postives = 158/370 (42.70%), Query Frame = 0 Query: 245 VIATIVNKFLMSPIMNMTSEQEK--KEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFEL-CRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAV-SAMGGATHRIGELLEIFDTSSSDESKEHGTTAIDLPRPGLAFKLSHVTVT-APGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYD--PDWNWFDV------LSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYE 601 V+A ++ L+ P + + K + + K ++L +E++ Q V++ ++ ++ V+ + + T + + S+I + A +LV + F ++ + + L SE +FVC+ L ++M P + +M A I + + ++ DE TA P A L + D++++ D+ LDI +G + + G GKSSLL AI G + G I +I+ + Q+ +V N SLK+ +L+ + D KY I E C D D P + ++ LS G+ QR++ R + + LD+ SA+ + + +Y+ Sbjct: 459 VLAGVLVMILLIPFNGFIASRTKTLQTNQMKEKDERIKLLNEVV--QGIKIVKLYAWEQSFLDIISNVRSKEVKILTHIGYLQAGNSFIWTCAPFLVSLVT----FATFILSSPENVLDSEKAFVCLTLFNILRFPLSMLPMIIGSMVLAGVSIKRINKFMNSEEIDEEAVEKKTA--YPDDKFAINLEKACLKWESDEDKNILSDVSLDIEVGSLVAVVGTVGSGKSSLLSAILGEMDKVSGLITVRGSIA--YGAQQAWVLNTSLKNNILF--------------NKSYDGDKYT---RIVEACALKSDLDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYD 801
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25") HSP 1 Score: 55.0694 bits (131), Expect = 1.078e-7 Identity = 52/186 (27.96%), Postives = 91/186 (48.92%), Query Frame = 0 Query: 425 AFKLSHVTV---TAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYP--LDAELVALTIE--QESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKC 603 A K+ +V++ T GL+ ++D+DLDI G + I G GKSSLL I G + +GSI N + ++ PQ+ ++ N +L++ +L+ + +L I+ S +DM D+ I ER + LS G+ R++ R ++ + LD+ SA+ + + R L+E Sbjct: 616 AVKMCNVSLSWETDEGLNT--LEDIDLDIEKGSLVAIVGQVGSGKSSLLSGILGEMEIVRGSI--NVDGQTIYAPQQPWLQNETLRNNILFGKRFNKKLYRRVIDACALSPDLDMLPAGDLTEIGERGIN-------------LSGGQKARVSLARCTXNNGDIYILDDPLSAVDVHVGRHLFENV 784
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000012127 (supercontig:LSalAtl2s:LSalAtl2s872:211054:214921:-1 gene:EMLSAG00000012127 transcript:EMLSAT00000012127 description:"augustus_masked-LSalAtl2s872-processed-gene-2.0") HSP 1 Score: 54.6842 bits (130), Expect = 1.487e-7 Identity = 66/235 (28.09%), Postives = 97/235 (41.28%), Query Frame = 0 Query: 887 AKNRICFICQQDFSGLPWCRLKDHVTFHFRREILALF-----PRSAKNCEVCQMTPNNMVRHLGNDHGALKKFIPTDLAILLFNRGRSGVK------------TM---------KHIRRIVGKDKMAKMSPKKLLNTVQGGQKVKEIKAPAAAFEQVFNPENMRIMLQACREKQNVCPL-CHKLVGSIRSHLGTHFGRFIVNQPKLLQDRTCQVCGKKNKTNNAA-ALHIGFTHN 1093 KN C C ++ G LK H+ H R +I F PRS C+ P++M+ H+G H +++F+P D +LF RG + TM KH++R G PK L T QG + V++ +FN E VC L CH L + +SHL +HF + ++N R C CG T++ A H+G TH+ Sbjct: 733 TKNWTCMFCYKEL-GNDKGNLKQHLLCHTRDKIRDHFMNPNNPRSCLFCDYNSNLPDHMITHVGLTHQKIREFLPRDYGDILF-RGPYAFELQPSNVAFCEHCTMEFTSVEELEKHLKRNGG--NCVWNCPKCGLKT-QGRKNVEKHTMHCQRKPSIFNCE--------------VCGLECHDLT-TFKSHLCSHFKQELMNVIGSDVSR-CDDCGIDFGTDSTGLATHVGTTHD 946
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2") HSP 1 Score: 54.299 bits (129), Expect = 2.281e-7 Identity = 46/186 (24.73%), Postives = 85/186 (45.70%), Query Frame = 0 Query: 422 PGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSI-WTNPNISVMFMPQKTFVTNGSLKDQVLY--PLDAELVALTIE--QESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEK 602 P F + + T P + +++Q ++L+I G ++ GPS GK++L+ ++ + GS+ W P+ +V + Q+ ++ N ++KD +L P + I T ID+ + D I ER +LS G+ QRLA R + F+D S+L + ++E+ Sbjct: 724 PETCFTVENGTFAWPKCETNVLQSINLEIKTGSLTIVIGPSGSGKTALISSLIEEMDRITGSVKWNVPD-TVALLGQRPWLLNTTIKDNILLGRPFKEKRYKKVIAACDLQTDIDLLPHGDDTEIGERGV-------------LLSGGQRQRLAIARCLYSKSYCTFMDAPFSSLDSKITSHVFEE 895 HSP 2 Score: 52.373 bits (124), Expect = 8.517e-7 Identity = 66/216 (30.56%), Postives = 95/216 (43.98%), Query Frame = 0 Query: 436 PGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNP-NISVMFMPQ-KTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFER--CGHSLDYDPDW------NWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSEL--AITCVSVGHR-KTLNEYHQKILRISG-LAEDGD 637 PG+ Q L+I Q + I G S GKS+LL I L V QGSI N NI+ + + + + FV + P DA L + TI + F ++ ++ CG ++ PD D S G+ Q L ++ P V LDESTSAL E L+ E T +SV HR + EY + ++ G + EDG+ Sbjct: 1664 PGIQ----QGFSLEIPYRQKVGICGRSGSGKSTLLMGIVRLSRVLQGSITINGININAIPLSRLRKFV--------ITIPQDAVLFSGTIRSNLDPENDFSDELIWSTLDKADCGKTVRNFPDGLDTCVTENGDNFSLGQRQELNIVKALLRRPRVVILDESTSALDPNREVALHNTLLEAFEDSTLISVAHRLSNIVEYERVLVMGEGRILEDGN 1867
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6") HSP 1 Score: 53.9138 bits (128), Expect = 2.717e-7 Identity = 90/407 (22.11%), Postives = 170/407 (41.77%), Query Frame = 0 Query: 217 APFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHS----ELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLI----YQFSKLVNMTPAVSAMGGATHRIGELL--EIFDTSSSDESKEHGTTAIDLPRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNP---NISVMFMPQKTFVTNGSLKDQVLYP-------LDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKC 603 P I Y I G+ G+ + F++ I N F+ + N +Q KK+ D R K L +L A++S + + + + +L ++ + + F+ L + ++ S+ +++V + + L SE FV ++L + + L ++ +++ + RI + L E + S H AI + P + + G SL +D+ +D+ G + I GP GKSSL+ A+ G + S TNP + SV + PQ ++ N S+KD +L+ D L A ++E + ++ F D I E+ + LS G+ QR++ R + + FLD+ + + + + L+E+ Sbjct: 951 GPLQIIAAIYLLINTLGYSALAGVLVMFLLIPI-NGFIAVRMKNAQMKQMKKK-DERVKKMNEILQGIKIIKLYAWESSFSKLISSIRFEEIKLLKLSSKYFG---FMMLTISSTTFFISLFTFIVYVV----------SDPENHILDSEKIFVSISLFNILRFPLNMLTHVIGGIASASVSLKRINKFLASEELEEGILVRSNSHDHQAICI-HP-------SSSFSWKGSSESLFKDISMDVNRGNLIAIIGPVGSGKSSLISALLG--EMLFTSKGTNPVEIHGSVAYTPQNAWMQNVSVKDNILFGRKFNKNWYDEVLKACSLESD---MEXFPSGDSTEIGEKGIN-------------LSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEV 1316
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|465683|sp|P34230.1|PXA2_YEAST (RecName: Full=Peroxisomal long-chain fatty acid import protein 1; AltName: Full=Peroxisomal ABC transporter 2) HSP 1 Score: 125.946 bits (315), Expect = 3.828e-28 Identity = 136/611 (22.26%), Postives = 246/611 (40.26%), Query Frame = 0 Query: 89 LILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLG--MILLI--SVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYV-------MSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCF--SYIGSIASYLVIAIPIFGGFYDYLD-------GTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIFDTSSSDESKEHGTTAIDLPRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNV--------------PQGSIWTNPNISVMFMPQKTFVTNGS-LKDQVLYPL----------------DAELVAL--TIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDW---------------NWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 LIL + I+ + + V + L + F K I LG MIL I S + +L + ++ V R+++ + YL N + ++ +V V +T DI TF M + + M DLI+ F + + T G + L + + K + +T E FR H+ L +E +A E+ + L R + ++ T F Y A ++ +IPIF D G D++A N + + + V + + + G R+ + ++ D + D+ KE + K ++ + P ++ L+ +L D+ G +LLI GP+ CGKSSL R + GLW + P+ ++ + + ++ ++PQ+ ++ N S ++Q++YP DA+L+ + ++ E + + L + L + + NW + L+ G QRLA R+++H P A LDE TSA++ ME+++YE I+ +SV HR +L +H +L+ G Sbjct: 124 LILFITQAILLNIRTLLSLRVATLDGQLVSTLVRAQYANFTK---ILLGKWMILGIPASFINSLISYTTKLCAVTINRKVSDFLLSKYLSNHHTFY-SVASAESVSEIQDNLTKDIYTFSMNSSLLLNQLLKPMLDLILCSFKL----LTSNTSVMGEGTLALGLIVYASNSLLKLIQPNFTRLTMASASLESWFRSLHSNLHSSNEEIALLRGQKRELENVDYSFYRLVLFLNREIKARAIYDV-ATAFVIKYTWGAAGLVLCSIPIFFKNKPSEDTLQLKEPGNDMTADFITNRRLLVTASSSIGRFVELKRNIQQLRGIRLRLNKFNDLLDANKGDDEKEPRDERCIVEYDDSRIKFENIPLITPA-NQVLVPELSFDLKHGNHLLIIGPNGCGKSSLFRILGGLWPIRATPNKNHQSKLIMPRRTV--DRDCAIFYLPQRPYMGNRSTFREQIIYPDSIEQFKERYHNDYDLGDADLIKILQLLDLEDLVTENMSLLLAQRTSKNDSQQLSTEDNQSPCAIKVRDAFSIVRNWSEELTIGVQQRLAMARMYYHKPKFAVLDECTSAVAPEMEQRMYENAQNFGISLISVCHRTSLWHFHNYLLKFDG 722
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|2828199|sp|P31826.2|YDDA_ECOLI (RecName: Full=Inner membrane ABC transporter ATP-binding protein YddA; AltName: Full=CDS102) HSP 1 Score: 103.219 bits (256), Expect = 2.040e-21 Identity = 109/484 (22.52%), Postives = 216/484 (44.63%), Query Frame = 0 Query: 136 LGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGR-GYVDNSDQRITADI-----GTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPT-----GMFLFFVIATIVNKFLMS-----PIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALI-SENSFVCMN-----LIYQFSKLVNMTPAVSAMGGATHRIGELLEIFDTSSSDESK--EHGTTAIDLPRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVL----YPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSAL 591 LG+ +LISV T WL++++ + R LT + +KN+Y+ + G DN DQRI DI T +++ ++ S ++ F + + A T + VG T G ++ V+ ++ L + I + E+++ E FR +EL+A + +++ ++ + + RL N Q +L+ ++ +S S+ Y ++ G +L L+ S +F+ ++ IY++ +L + + R+ E ++ + +++ K +H A +++ ++ P ++ ++++L+ + G+ LL+ G S GK++LL+ + W +G I ++P S ++ Q + G LK+ + P+D + ++ + Q + + K H +R G D+LS GE QR+A RL P FLDE+TS L Sbjct: 82 LGIFVLISVNKT---WLIKLLTIRWREWLTDYYLNRWFADKNYYFTQIYGEHKNTDNPDQRIAEDILLLISKTLSLSFGFIQSLSMLITFTVILWE-SAGTLSFTVGGTEWNIQGYMVYTVVLIVIGGTLFTHKVGKRIRPLNVEKQRSEATFRTNLVQHNKQAELIALSNAESLQRQELSDNFHTIKENWHRLMNRQRWLDYWQNIYSRSLSVLPYFLLLPQFISG------QINLGGLMKSRQAFMLVSNNLSWFIYKYDELAELAAVID-------RLYEFHQLTEQRPTNKPKNCQH------------AVQVADASIRTPD-NKIILENLNFHVSPGKWLLLKGYSGAGKTTLLKTLSHCWPWFKGDI-SSPADS-WYVSQTPLIKTGLLKEIICKALPLPVDDKSLSEVLHQ----VGLGKLAARIHDHDRWG------------DILSSGEKQRIALARLILRRPKWIFLDETTSHL 517
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|81856908|sp|Q9HT73.1|ZNUC_PSEAE (RecName: Full=Zinc import ATP-binding protein ZnuC >gi|122256330|sp|Q02DK9.1|ZNUC_PSEAB RecName: Full=Zinc import ATP-binding protein ZnuC) HSP 1 Score: 69.3218 bits (168), Expect = 1.870e-11 Identity = 52/180 (28.89%), Postives = 91/180 (50.56%), Query Frame = 0 Query: 427 KLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSEL 606 +L+ V V+ G ++++ D+DL I GQ + + GP+ GK++L+R++ GL G +W P +++ +MPQK V + +L VL L LV +++E + + + + H+ ER S +S GELQR+ R P + LDE + +A + +LY +L Sbjct: 7 RLTQVGVSFNG--QAVLSDVDLAIEPGQIVTLIGPNGAGKTTLVRSVLGLLKPHVGEVWRRPRLTIGYMPQKLHV-DATLPLSVLRFL--RLVP-GVKREQALAAL-REVGAAHVLERPLQS------------ISGGELQRVLLARALLRKPELLVLDEPVQGVDVAGQAELYRLIGKL 167
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|123535023|sp|Q2SPI3.1|ZNUC1_HAHCH (RecName: Full=Zinc import ATP-binding protein ZnuC 1) HSP 1 Score: 67.3958 bits (163), Expect = 5.541e-11 Identity = 46/175 (26.29%), Postives = 83/175 (47.43%), Query Frame = 0 Query: 426 FKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLY 600 +L VTV G R+LI+++ DI G+ + + GP+ GKS+L +A+ G+ + +G + P + + +MPQ+ F + SL PL + + + ++M H+ ++ H+ LS GELQR+ R +P + LDE + + + +LY Sbjct: 7 IRLQDVTVKIQG--RTLIENVTFDINSGEIITVIGPNGAGKSTLAKALLGIQPLSRGEVLRRPGLKIGYMPQR-FHIDASL------PLTVKRFLQLAHNPQRWREALQRVEMEHVAKQPMHT------------LSGGELQRVLLARALQRAPDLLVLDEPAQGVDVTGQAELY 160
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|60389530|sp|Q65S66.2|FBPC_MANSM (RecName: Full=Fe(3+) ions import ATP-binding protein FbpC) HSP 1 Score: 68.9366 bits (167), Expect = 6.304e-11 Identity = 57/192 (29.69%), Postives = 88/192 (45.83%), Query Frame = 0 Query: 442 LIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIW-----------TNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSE----LAITCVSVGHRKT 618 +I DLDL I G + + GPS CGK+++LR + GL N G I+ N +I ++F F + S+ D V Y L + +A E++ I + + +D+ +R + D +S G+ QR+A R P V DE S L + R + EK E L+IT + V H +T Sbjct: 23 VIDDLDLVIKRGTMVTLLGPSGCGKTTILRLVAGLENPTSGQIFIDGEDVTKSSIQNRDICIVFQSYALF-PHMSIGDNVGYGLRMQNIAKE-ERKQRIREALELVDLAGFEDR------------FVDQISGGQQQRVALARALVLKPKVLLFDEPLSNLDANLRRSMREKIRELQQSLSITSLYVTHDQT 200
BLAST of abc subfamily abcd vs. nr
Match: gi|586962538|gb|AHK05657.1| (ATP-binding cassette transporter sub-family D member 4 isoform X1 [Tigriopus japonicus]) HSP 1 Score: 724.546 bits (1869), Expect = 0.000e+0 Identity = 336/595 (56.47%), Postives = 451/595 (75.80%), Query Frame = 0 Query: 59 VETYNGFNWTFIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIFDTSSSDESKEH--GTTAIDLPRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISGLAEDGDRGNDN-NVRWTIQN 650 V Y GFNW F+ R+ KLH+FLFPSW S + L V +L+VR +EEY+GY+VGLISS YYQ+LGDKDFDAFV+ T SLGMI+LI+ + T RIW EMIVV+ R +T + + Y Q+ +FY +N+LGRG++ N+DQRITAD+ +FC TY ++++D++++P I YY YDA TRAGW+GP GMFLFFVI+T++NK LMSP++N ++EQ+K+EG+FR++H + R+HSE LAFQ + V + K + L LCR QRR++N+Q FLNL F Y+ SIAS+LVIA+P+F G YD L G++LS+LISEN+FVC+NLIYQFSKLVN++P VS MGGA HRI EL+E F + D + ++ G P +AF+L++V V +PG+DR LI+DL LDI LGQNLL+ GPSSCGKSSLLR I+GLW + G+I NP++ +++PQ+ ++ +GSLK+ VL+P+D +LTIE E I D+ + HI ERCG +LDYDP WNW DV+SPGELQRLAFIRLF+H P++AFLDESTSALSL++E KLYEKCS++ ITCVSVGHR+TL +YH KIL I ++ + N N WT+++ Sbjct: 8 VVKYYGFNWQFLVRVTKLHKFLFPSWTSIPVFLFVFILLVRCLEEYVGYYVGLISSDYYQVLGDKDFDAFVQVTLKSLGMIVLIAFIKTTRIWFQEMIVVSWRLAMTTTLNQKYFQHHSFYHINILGRGFLGNADQRITADVSSFCSTYGFIIADILVSPLTIGYYTYDAYTRAGWIGPLGMFLFFVISTVINKLLMSPVVNASAEQDKQEGEFRFQHVSTRIHSESLAFQDGSEVNLEKIQGSLRRLCRSQRRVFNLQFFLNLATNLFQYVSSIASFLVIAVPLFSGAYDDLTGSELSSLISENAFVCINLIYQFSKLVNISPYVSEMGGAAHRIAELIETFQSLEMDHANKNRDGIGMSPYLDPKVAFRLTNVDVRSPGMDRPLIKDLSLDIELGQNLLVMGPSSCGKSSLLRVIKGLWPISNGAIEVNPDLKAIYLPQRPYMMSGSLKELVLHPIDTLQCSLTIEDEQRIKDLVTEFGLDHILERCGGNLDYDPQWNWSDVMSPGELQRLAFIRLFYHKPALAFLDESTSALSLSVEEKLYEKCSKMGITCVSVGHRETLKKYHTKILEIKEESDHNASTHVNTNALWTLRD 602
BLAST of abc subfamily abcd vs. nr
Match: gi|586962540|gb|AHK05658.1| (ATP-binding cassette transporter sub-family D member 4 isoform X2 [Tigriopus japonicus]) HSP 1 Score: 543.117 bits (1398), Expect = 9.131e-178 Identity = 268/596 (44.97%), Postives = 389/596 (65.27%), Query Frame = 0 Query: 60 ETYNGFNWTFIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIF--------------DTSSSDESKEHGTTAIDLPRPGL------AFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTN-PNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISGLAE 634 + + GFN +++R +LH LFP W S L+V+L+I+ G+E+++ +VGLIS YY++LGD+D+ F T + I+ + + ++R+++ ++ V RR LT A+ ++Y +Y +NVL +DN DQRITAD+ C +Y +++DLI+ PF I+YY Y A TRAG GPTGMFLFF+ +TI+NK LMSP++ +T EQE++EGDFR+KH T+R H+E LAF VE K+ EKL LC+ Q+ L+N Q L+L FSY+GSIAS+LVIAIPIF G YD L + L+ +SEN+FVCM L++QF+KLV M VS + G THRI E+ E+ +S DE ++ + P+P + L +V + P + LI++L+L + LG NLLI G SS GKSSLLR I GLW + +G I N ++ V F+PQ+ F T+G+L++Q++YPL + ++ ++++ + + + + +RCG SLD DP W+W+D LSPGE+QRLAFIRLF+H P +AFLDESTSALSL +E LY+KC E I VSVGHR+TL +YH ++L I GL++ Sbjct: 3 DNHYGFNTLYLRRFYRLHGLLFPGWRSLNAALMVLLVILSGLEQWLALYVGLISGGYYKVLGDQDWSGFKTTTLDATLKIMAMVITKSVRVYVTNVMTVGWRRSLTMALHQMYFARIRYYRLNVLDESGLDNPDQRITADVSLLCQSYGSIIADLIVVPFTISYYTYSAYTRAGPAGPTGMFLFFLASTIINKLLMSPVVRLTVEQERREGDFRFKHVTVRTHAESLAFHKSARVESIKSDEKLLSLCQTQQSLFNRQLALDLATNVFSYMGSIASFLVIAIPIFSGVYDNLSPSQLAQAVSENAFVCMYLVFQFTKLVQMASTVSRLAGVTHRIAEMTEVLINMNRSFHCQGRKSSNNSEDEDQDKLVAVVPDPKPSESPLKNHSLILENVDLITPKSRKKLIRNLNLALDLGSNLLIVGQSSAGKSSLLRVIAGLWPLDRGVIQRNLSDLDVFFLPQQPFFTDGTLREQIVYPLQVLTSQIDPQESVDLLNILEEVGLGDLPKRCGGSLDTDPKWSWYDKLSPGEMQRLAFIRLFYHCPKMAFLDESTSALSLDLEDLLYKKCLEKNIALVSVGHRETLRQYHDQLLTI-GLSD 597
BLAST of abc subfamily abcd vs. nr
Match: gi|1022773295|gb|KZS17405.1| (ABC protein, subfamily ABCD [Daphnia magna]) HSP 1 Score: 470.315 bits (1209), Expect = 9.878e-150 Identity = 249/586 (42.49%), Postives = 370/586 (63.14%), Query Frame = 0 Query: 63 NGFNWTFIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLE----IFDTSSSDE----------SKEHGTTAIDLPRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSI---WTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 +GFN F +R +L LFP S L L +LL+V ++E+I Y VGLI S +YQ+LG+KD F+ QT S+G+IL ++V ++ ++ +++ + R+ LT AV +LY + N+Y +NVL + +VDN DQRITADI C+ ++ V ++++PF IAYY+Y A GWVGPT FLFF++ T VNK LMSPI+ E++EGDFRYKH +R ++E LAF + +E KT KL L Q LY Q FLNL F Y+GSI SYL +A+PIF G YD L +LSALIS+N+FVC+ LI FS LV+++ +V+ + G THR+ EL+E ++D S ++ K T D+ + G + + V APG L+++L L + G++LLITG SS GK+SLLR +RGLW + +G++ T V+F+PQK ++T+G+L++Q+ +PL +L + ++ ++ + + + R G LD +WNW+DVLSPGE+QRL+FIRL +H P++AFLDE+TSAL + ME+ LY + IT +SVGHR++L +H+ +L + G Sbjct: 13 HGFNVNFFRRFWRLQHLLFPGVFSLPLGLFSLLLLVALLDEFIIYGVGLIPSGFYQVLGEKDLPGFINQTLRSVGIILAVAVNKAIKTYISQVLNLTWRQLLTRAVHRLYFTDINYYQLNVLDK-FVDNPDQRITADINILCLVFSSVAIKVVVSPFTIAYYSYKAYVGTGWVGPTSCFLFFIVGTFVNKLLMSPIVAWVVRNERREGDFRYKHMQIRSNAESLAFLTGARLEESKTNNKLDLLLTTQHSLYGRQFFLNLAVNMFDYLGSIISYLALAVPIFSGRYDGLSSAELSALISQNAFVCIYLISTFSTLVDLSSSVTQLAGVTHRVSELIERLQQLYDRSDAETPGDLKVVSVCKKNSVGTMDDMKQEG--YLMEGVAFKAPGRSEDLVKELYLHLRPGESLLITGSSSAGKTSLLRLLRGLWKLNRGTLTAHCTPGPCGVLFLPQKPYLTDGTLREQITFPLSVDLDLIPNDETEELLSYLHKMKLDGLMTRIG-GLDRPAEWNWYDVLSPGEMQRLSFIRLLYHKPAMAFLDEATSALDMEMEQLLYSAAVDKGITLISVGHRESLRAFHKNLLHLKG 594
BLAST of abc subfamily abcd vs. nr
Match: gi|321453858|gb|EFX65057.1| (ABC protein, subfamily ABCD [Daphnia pulex]) HSP 1 Score: 458.759 bits (1179), Expect = 1.572e-145 Identity = 250/575 (43.48%), Postives = 376/575 (65.39%), Query Frame = 0 Query: 63 NGFNWTFIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIFDTSSSDES---KEHGTTAIDLPRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSI---WTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 +GFN +F +R +L LFP S L L +LL+V ++E+I Y VGLI S +YQ+LG+KDF F+ QT S+G+IL ++V ++ ++ +++ + R+ LT AV +LY N+Y +NVL + +VDN DQRITADI C+ ++ V ++++PF I+YY+Y A GWVGPT FLFF++ T+VNK LMSPI+ + E++EGDFRYKH +R ++E LAF + +E KT KL L + Q LY Q FLNL F Y+GSI SYL +A+PIF G YD + +LS+LIS+N+FVC+ LI FS LV+++ +V+ + G THR+ EL+E+ +++ + + E T G+AFK APG L++DL L + G++LLITG SS GK+SLLR +RGLW + +G++ +T V+F+PQK ++T+G+L++Q+ +PL +L +T ++ +++ + + + + R G LD +WNW+DVLSPGE+QRL+FIRL +H P++AFLDE+TSAL + ME+ LY + IT VSVGHR +L +H+K+L + G Sbjct: 13 HGFNVSFFRRFWRLQHLLFPGIFSLPLGLFALLLLVALLDEFIIYGVGLIPSGFYQVLGEKDFPGFINQTLKSVGIILAVAVNKAVKTYISQILNLTWRQLLTRAVHRLYFTGINYYQLNVLDK-FVDNPDQRITADINILCLVFSSVAIKVVVSPFTISYYSYKAYVGTGWVGPTSCFLFFIVGTVVNKLLMSPIVAWVVKNERREGDFRYKHMQIRSNAESLAFLTGARLEESKTNNKLDVLLKTQHSLYGRQFFLNLAVNMFDYLGSIISYLALAVPIFSGRYDDISPAELSSLISQNAFVCIYLISTFSTLVDLSSSVTQLAGVTHRVSELIELSISTTKNTTGMFDEVNTEDDGYFMEGVAFK-------APGRTDELVKDLCLHLKPGESLLITGSSSAGKTSLLRLLRGLWRLSRGNLTAHYTPGPCGVLFLPQKPYLTDGTLREQITFPLSVDLELITNDETEELLNYLQKMKLDGLMSRIG-GLDRPVEWNWYDVLSPGEMQRLSFIRLLYHRPAMAFLDEATSALDMEMEQLLYSAAVDKGITLVSVGHRASLRAFHKKVLHLKG 578
BLAST of abc subfamily abcd vs. nr
Match: gi|585654777|ref|XP_006884745.1| (PREDICTED: ATP-binding cassette sub-family D member 4 [Elephantulus edwardii]) HSP 1 Score: 453.366 bits (1165), Expect = 2.443e-143 Identity = 239/592 (40.37%), Postives = 365/592 (61.66%), Query Frame = 0 Query: 53 PRSGTKVETYNGFNWTFIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLE-IFDTS-SSDESKEHGTTAIDLPR-PG-------LAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNI---SVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 P + K + F+QR ++ + LFP+W+S +++ + LL V +E+ I Y VGLI S YY++LG+KD F T +++ +I+L S + + + ++ V+ R+ LT + +LY + + +Y +NVL R +DN DQRI+ D+ FC + + L+I+PF + YY Y GW+GP +F +F++ T+VNK LM PI+ +QEK EGDFR+KH +R+++E AF VE +T +L L + QR L + + +L + F Y+GSI SY+VIAIPIFGG Y L T+LS L+S+N+FVC+ LI F++L++++ +S + G THRIGEL E + D S S++S+ + DL + PG +AF L V+++AP D+ LI+DL L I GQ+LLI G + GK+SLLR + GLW QGS+ + V+F+PQK F T+G+L++QV+YPL + I+ + + ++ R G LD DWNW+DVLSPGE+QRL+F RLF+ P A LDE+TSAL+ +E +LY C +L +TC+SVGHR++L ++H +LR+ G Sbjct: 4 PAAAPKAGARPRLDLQFLQRFLQIQKVLFPTWSSQNVLMFLTLLCVALLEQLIIYQVGLIPSQYYRVLGNKDLGEFKSLTILAVVLIVLNSTLKSFDQFTCNLLYVSWRKDLTEHLHRLYFRGRVYYTLNVL-RDDIDNPDQRISQDVERFCRQLSTMAGQLVISPFTLVYYTYQCFQSTGWLGPVSIFGYFILGTVVNKILMGPIVTKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGHVEHVRTDRRLQRLLQTQRELMSKELWLYIGINTFDYLGSILSYVVIAIPIFGGVYGDLSPTELSTLVSKNAFVCIYLISCFTRLIDLSTTLSDVAGYTHRIGELQETLLDMSLKSEDSESLDNSEWDLDKAPGRPADTTDVAFALERVSISAPSSDKPLIKDLGLRICEGQSLLIVGNTGTGKTSLLRVLGGLWTSTQGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKEIYPDSGSTDDERIMRFLEVAGLSNLVTRTG-GLDQQVDWNWYDVLSPGEMQRLSFTRLFYLQPKYAVLDEATSALTEEVESELYRICQQLGMTCISVGHRRSLEKFHSWVLRLYG 593
BLAST of abc subfamily abcd vs. nr
Match: gi|507630930|ref|XP_004699087.1| (PREDICTED: ATP-binding cassette sub-family D member 4 [Echinops telfairi]) HSP 1 Score: 453.366 bits (1165), Expect = 2.986e-143 Identity = 240/576 (41.67%), Postives = 351/576 (60.94%), Query Frame = 0 Query: 69 FIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIF--------DTSSSDESKEHGTTAIDLPR--PGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNI---SVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 F+QR ++ + LFPSW+S ++ + LL V +E+ + Y VGL+ S YYQ+LG KD D F TF+++ +I+L S + + ++ ++ V+ R+ LT + +LY Q + +Y +NVL R +DN DQRI+ D+ FC + + LII+PF + YY Y GW+GP +F +F++ T VN+ LM PI+ +QEK EGDFR+KH +R+++E AF VE +T +L L + QR L + +L + F Y+GSI SY+VIAIPIF GFY L T+LSAL+S+N+FVC+ LI FS+L++++ +S + G THRIGEL E D+ DESK A P AF L V++ P D+ LI+DL L I GQ+LLITG + GK+SLLR + GLW QGS+ + V+F+PQK F T+G+L++QV+YPL + I+ + + + R G LD DWNW+DVLSPGE+QRL+F RLF+ P A LDE+TSAL+ +E +LY C +L +TC+SVGHR +L ++H +L++ G Sbjct: 22 FLQRFLQIQKVLFPSWSSQNALMFLTLLCVALLEQLVIYQVGLVPSQYYQVLGTKDADGFQSLTFLAVVLIVLNSTLKSFDQFICNLLYVSWRKDLTEYLHRLYFQGRVYYTLNVL-RDDIDNPDQRISQDVERFCRQLSTMAGQLIISPFTLGYYTYQCFQSTGWLGPVSIFGYFLLGTTVNRTLMGPIVAKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGHVEHMRTDRRLQRLLQTQRELMAKELWLYIGINTFDYLGSILSYVVIAIPIFSGFYGDLSPTELSALVSKNAFVCIYLISCFSRLIDLSTTLSDVAGYTHRIGELQETLLDMSLKSQDSEDLDESKWDSDRAPGWPAEPADTAFILERVSICVPSSDKPLIKDLGLKISDGQSLLITGNTGTGKTSLLRTLGGLWASTQGSVQMLADFGPHGVLFLPQKPFFTDGTLREQVIYPLKEIYPDSGSTDDERILRFLELAGLPSLVTRTG-GLDEQVDWNWYDVLSPGEMQRLSFARLFYLQPRFAVLDEATSALTEEVESELYRTCQQLGMTCISVGHRHSLEKFHSWVLKLHG 595
BLAST of abc subfamily abcd vs. nr
Match: gi|586470153|ref|XP_006865671.1| (PREDICTED: ATP-binding cassette sub-family D member 4 [Chrysochloris asiatica]) HSP 1 Score: 451.825 bits (1161), Expect = 8.533e-143 Identity = 235/576 (40.80%), Postives = 355/576 (61.63%), Query Frame = 0 Query: 69 FIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIF--------DTSSSDESKEHGTTAIDLPR--PGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNI---SVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 F+QR ++ + LFPSW+S +++ + LL V +E+ + Y VGLI S +YQ+LG KD + F + TF+++ +I+L + + + + ++ V+ R+ LT + +LY + + +Y +NVL R +DN DQRI+ D+ FC + + LII+PF + YY Y GW+GP +F +F++ T+VNK LM PI+ +QEK EGDFR+KH +R+++E AF VE +T +L L + QR L + + +L + F Y+GSI SY+VIAIPIF G Y L T+LS L+S+N+FVC+ LI F++L++++ ++ + G THRIGEL E D+ DESK A P AF L V+++AP D+ LI+DL L I GQNLLITG + GK+SLLR + GLW +GS+ + V+F+PQK F T+G+L++QV+YPL + I+ + + + R G LD DWNW+DVLSPGE+QRL+F RLF+ P A LDE+TSAL+ +E +LY C +L +TC+SVGHR++L ++H +L++ G Sbjct: 20 FLQRFLQIQKVLFPSWSSENVLMFLTLLCVALLEQLVIYQVGLIPSQFYQVLGSKDLNGFKRLTFLAVVLIVLNATLKSFDQFTCNLLYVSWRKGLTEHLHRLYFRGRVYYTLNVL-RDDIDNPDQRISQDVERFCRQLSSMARQLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFILGTMVNKLLMGPIVAKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGHVEHMRTDRRLQRLLQTQRELMSRELWLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCIYLISCFTRLIDLSTTLTDVAGYTHRIGELQETLLDMSLKSQDSEDLDESKWDMDMAPGWPAELADTAFALERVSISAPSSDKPLIKDLGLKISEGQNLLITGNTGTGKTSLLRVLGGLWESTRGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKEIYPDSGSADDERIVRFLELAGLSSLVTRTG-GLDQQVDWNWYDVLSPGEMQRLSFTRLFYLQPKFAVLDEATSALTEEVESELYRICHQLGMTCISVGHRRSLEKFHSWVLKLCG 593
BLAST of abc subfamily abcd vs. nr
Match: gi|471361219|ref|XP_004371175.1| (ATP-binding cassette sub-family D member 4 [Trichechus manatus latirostris]) HSP 1 Score: 450.669 bits (1158), Expect = 2.462e-142 Identity = 237/576 (41.15%), Postives = 360/576 (62.50%), Query Frame = 0 Query: 69 FIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIF--------DTSSSDESKEHGTTAIDLP-RPG-LAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNI---SVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 F+QR ++ + LFPSW+S ++ + LL V +E+ + Y VGLI S YY++LG+KD D F TF+++ +I+L S++ + ++ ++ V+ R+ LT + LY + + +Y +NVL R VDN DQRI+ D+ FC + + S LI++PF + YY Y GW+GP +F +F++ T+VNK LM PI+ +QEK EGDFR+KH +R+++E AF VE +T +L L + QR L + + +L++ F Y+GSI SY+VIAIPIF G Y L T+LS L+S+N+FVC+ LI F++L++++ +S + G THRIGEL E D+ + DES+ A + P P AF L V+++AP D+ LI+DL L I GQ+LLITG + GK+SLLR + GLW +GS+ + V+F+PQK F T+G+L++QV+YPL + I+ + + + R G LD DWNW+D+LSPGE+QRL+F RLF+ P A LDE+TSAL+ +E +LY C +L +TC+SVGHR++L ++H +L++ G Sbjct: 20 FLQRFLQIQKVLFPSWSSQNALMFLTLLCVVLLEQLVIYQVGLIPSQYYRVLGNKDLDGFKSLTFLAVMLIVLNSMLKSFDQFICNLLYVSWRKNLTEHLHHLYFRGRVYYTLNVL-RDDVDNPDQRISQDVERFCRQLSSMASQLIVSPFTLIYYTYQCFQSTGWLGPVSIFGYFILGTMVNKILMGPIVAKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGHVEHMRTDRRLQRLLQTQRELMSKELWLSIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCLYLISCFTRLIDLSTTLSDVAGYTHRIGELQETLLDMSLTSQDSENLDESEWDLDKAPEWPAEPADTAFFLERVSISAPSSDKPLIKDLGLKISEGQSLLITGNTGTGKTSLLRVLGGLWASTRGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKEIYPDSGSTDDDRIMRFLELAGLSSLVIRTG-GLDQQVDWNWYDILSPGEMQRLSFTRLFYLQPKYAVLDEATSALTEEVESELYRICQQLGMTCISVGHRRSLEKFHSWVLKLYG 593
BLAST of abc subfamily abcd vs. nr
Match: gi|632975432|ref|XP_007904226.1| (PREDICTED: ATP-binding cassette sub-family D member 4 [Callorhinchus milii]) HSP 1 Score: 449.899 bits (1156), Expect = 5.109e-142 Identity = 239/579 (41.28%), Postives = 356/579 (61.49%), Query Frame = 0 Query: 69 FIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIFDTSSSDESKEHGTTAIDL------------PRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSI----WTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 F+QR ++ L+PSW S ++++ LL V +E+ + Y VG+I S +Y++LG+KD +F T I++ +I+L SV+ + ++ ++ V R+ LT + + Y Q K +Y +NVL R +DN DQRI+ D+ FC + V S II+PF + YY Y GW+GP +F++FVI + VNK L+ PI+ EQEK EGDFR+KH +R+ +E AF +VE +T ++L EL R QR L + +L+L F Y+GSI SY+VIA+PIF G YD L +L AL+S+N+FV + LI FS+L++++ +VS + G THRIGEL E S + KE + DL G A+ L V+ T+P D+ L+Q+L L I G +LLITG + GK+SLLR + GLW +GS+ P+ ++F+PQK F T+G+L++QV+YPL E+ + + II + + + +R G LD +WNWFD LSPGE+QRL+F RL++H P A LDE+TSAL+ +E +LY C +L +T VSVGHR +L +YH +L++SG Sbjct: 23 FLQRFGRIQAILYPSWLSQSVLMYATLLAVALLEQLVVYQVGIIPSHFYEVLGNKDLTSFRNLTLIAITLIVLNSVLKSFDQFISSLMYVHWRQSLTTYLHRNYFQRKVYYVLNVL-REDLDNPDQRISQDVERFCQALSTVASKCIISPFTLGYYTYQCFHSTGWMGPVSIFIYFVIGSTVNKILIGPIVATLVEQEKLEGDFRFKHMQIRVGAESAAFYRAGSVEQVRTGKRLQELLRTQRLLMQRELWLHLGVNTFDYLGSILSYVVIAVPIFSGVYDGLHPAELIALVSKNAFVSIYLISCFSQLIDLSTSVSDLAGYTHRIGELQEACLEISKSQGKEGLCVSEDLWEFEDSLDLGEGQSSGKAWILERVSFTSPSSDQLLVQNLTLQITEGNSLLITGNTGTGKTSLLRILNGLWEAAEGSVRRLTCFGPH-GILFIPQKPFFTDGTLREQVIYPLK-EIYPASDSADERIIRFLELTGLMSLLKRTG-GLDKQMEWNWFDALSPGEMQRLSFARLYYHQPKYAVLDEATSALTEQVEGELYRACKQLGMTVVSVGHRSSLEKYHDSLLKLSG 597
BLAST of abc subfamily abcd vs. nr
Match: gi|731466146|ref|XP_010587045.1| (ATP-binding cassette sub-family D member 4 isoform X1 [Loxodonta africana]) HSP 1 Score: 448.743 bits (1153), Expect = 1.800e-141 Identity = 238/576 (41.32%), Postives = 358/576 (62.15%), Query Frame = 0 Query: 69 FIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIF--------DTSSSDESKEHGTTAIDLP-RPG-LAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNI---SVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 F+QR ++ + LFPSW+S + ++ + LL + VE+ + Y VGLI S YY++LG+KD D F TF+++ +I+L S + + + ++ V+ R+ LT + +LY + + +Y +NVL R VDN DQRI+ D+ FC + + S LII+PF + YY Y GW+GP +F +F++ T+VNK LM PI+ +QEK EGDFR+KH +R+++E AF VE +T +L L + QR L + + +L++ F Y+GSI SY+VIAIPIF G Y L T+LS L+S+N+FVC+ LI F++L++++ +S + G THRIGEL E D+ + DES+ + A P P AF L V+++AP D+ LI+DL L I Q+LLITG + GK+SLLR + GLW +GS+ + V+F+PQK F T+G+L++QV+YPL + I+ + + + R G LD DWNW+DVLSPGE+QRL+F RLF+ P A LDE+TSAL+ +E +LY C +L +T VSVGHR++L ++H +L++ G Sbjct: 24 FLQRFLQIQKVLFPSWSSQSALMFLTLLCMVLVEQLVIYQVGLIPSQYYRVLGNKDLDGFKSLTFLAVMLIVLNSTLKSFDQFTCNLLYVSWRKDLTEYLHRLYFRGRVYYTLNVL-RDDVDNPDQRISQDVERFCRQLSSMASQLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFILGTVVNKILMGPIVAKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGHVEHMRTDRRLQRLLQTQRELMSKELWLSIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCIYLISCFTRLIDLSTTLSDVAGYTHRIGELQETLLDMSLTSQDSENLDESEWNLDKAPGWPAEPADTAFVLERVSISAPSSDKPLIKDLGLKISESQSLLITGNTGTGKTSLLRVLGGLWASTRGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKEIYPDSGSTDDERIMRFLELAGLSSLVTRTG-GLDQQVDWNWYDVLSPGEMQRLSFTRLFYLQPKYAVLDEATSALTEEVESELYRICQQLGMTYVSVGHRRSLEKFHSWVLKLYG 597 The following BLAST results are available for this feature:
BLAST of abc subfamily abcd vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 7
BLAST of abc subfamily abcd vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc subfamily abcd vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold87_size395581:172854..209896+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold87_size395581-snap-gene-2.14 ID=maker-scaffold87_size395581-snap-gene-2.14|Name=abc subfamily abcd|organism=Tigriopus kingsejongensis|type=gene|length=37043bp|location=Sequence derived from alignment at scaffold87_size395581:172854..209896+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc subfamily abcd' has the following synonyms
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