abc subfamily abcd, maker-scaffold87_size395581-snap-gene-2.14 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000005788 (supercontig:LSalAtl2s:LSalAtl2s3118:3124:4893:1 gene:EMLSAG00000005788 transcript:EMLSAT00000005788 description:"augustus_masked-LSalAtl2s3118-processed-gene-0.0") HSP 1 Score: 402.134 bits (1032), Expect = 5.955e-128 Identity = 233/591 (39.42%), Postives = 342/591 (57.87%), Query Frame = 0 Query: 66 NWTFIQRLAKLHRFLFPSWASATLILIVILLIVRGV---EEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGY-VDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIFDTSSS-------------DESKEHGTTAIDLPRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLY----PLDAELVALTIEQESTIID-MFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITC-----VSVGHRKTLNEYHQKILRI 629 NW R+ KLH + S LI I + + + GV E+Y+GY GL++ A+ ++L +KD + F S G+IL I+VV T+R+++ +++ V RR LT + LY ++Y VNVL + +DN DQR+T+D+ TFC+ Y +++ LII+PF I +Y +DA TR+GW+GP G+F++F++ VN FLMSP+ EK EGDFR+KH LR +E +AF + +E KT + L L + Q +Y + L+L+ F Y+G+I SYL+IA+P+F GFYD LD L IS+NSFVCM LIY S+LV++ + M G THR+ EL+EI + +S D+ T I+L L + +P R LI +L+L+I G +LITG SS GK+SLLR IRGLW +GSI + S+ F+ Q+ +T+GSL ++Y P+ +L + +D ++K D+F R W D+LSPGE+QR+ FIR+F+H P V LDEST++L +E LYE L ITC +SVGHR +L +YH K L++ Sbjct: 16 NWKLFVRIGKLHAII-----SRNLINIFVTICLLGVCILEQYVGYKTGLVAGAFXEVLLNKDTEGFKTTAIHSFGVILGIAVVKTVRMYVAKILSVFWRRTLTTNLHNLYFDADSYYKVNVLIKELGLDNPDQRMTSDVDTFCLVYGEMIARLIISPFTIGFYTWDAYTRSGWIGPVGVFIYFILGCFVNLFLMSPVSQRVFFMEKNEGDFRFKHMFLREKAEEIAFSNSAIIESIKTNKLLKSLIKSQLSVYTWEILLDLWINIFDYVGAIISYLIIAVPVFTGFYDSLDQAKLGNQISQNSFVCMTLIYNLSQLVDLASKFANMAGVTHRMIELVEILEKHNSNPCFFKDNAICTNDKDPHMFETMINLENIILK-------IPSPTTPRVLIDNLNLNIKTGDRILITGASSSGKTSLLRLIRGLWPTVEGSISFFTD-SIEFLSQRPLMTDGSLLQNMIYPSEXPISPDLTWFKDQLTRFNLDHLYKQYDLFQYQNR------------WEDILSPGEMQRICFIRVFYHRPQVVLLDESTASLPTNIEAMLYEY---LIITCPKITILSVGHRDSLRKYHMKELQL 578
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000005996 (supercontig:LSalAtl2s:LSalAtl2s324:163173:165128:-1 gene:EMLSAG00000005996 transcript:EMLSAT00000005996 description:"maker-LSalAtl2s324-augustus-gene-1.35") HSP 1 Score: 357.451 bits (916), Expect = 4.500e-111 Identity = 217/584 (37.16%), Postives = 331/584 (56.68%), Query Frame = 0 Query: 64 GFNWTFIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITR--AGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAF--QSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIFDTSSSDESKEHGTTAIDLP-----------RPGLAFKLSHVTVTAPGLDR-SLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDM-FKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCS-ELAITCVSVGHRKTLNEYHQKILRI 629 GFN F+ R L +F + L +I++L+ +E+ + Y +G+I + + L +D FV+ +SL ++ +++V++ RI E++ V+ RR LT + LY N FY + + DN DQRI +D Y ++S+++++PF+I+YY YD+ +G GP +F FF+ T +NK L++P++N E KEGDFR+KHA +R SE LAF Q + E + L LC QR+L LNL F Y SI SYL++ IP++ GFY L+ +LS +ISE +FV + LI +FS+LV++ VS + THR+ E +E + K+ A P LS++++ P + R +L+ +L+L++ +G NLLITG SSCGK+SLLR +RGLWN GS + +V+F+ QK F TNGSL+ QV YPL+ + +++ +Q I M + + +R +LD +PD +W ++LSPGE QR+A IR HSP + LDE+TSALSL ME Y + S IT +SVGHR +L ++H K L+I Sbjct: 13 GFNLQFLHRFWHLQSLIFTDRINIGLAIIILLICS--LEQLVMYKIGMIPGQFIRALVSEDESKFVRAIVLSLIIVCFMTLVLSARILTSELLSVSWRRSLTRCLHSLYFFNTGFYTLKL------DNPDQRIASDAECLVSIYGQILSEILLSPFVISYYIYDSYRGRGSGPYGPLIIFGFFLFGTFINKTLLTPVVNSGVEVRSKEGDFRFKHAEIRSQSESLAFLGQMGSFAEASRVDHLLEILCEAQRKLVLATYRLNLATNFFDYGASIISYLIVGIPVYNGFYKGLNVEELSGIISETAFVNIMLISKFSRLVDLAGKVSRLASVTHRVAEFVEKLSQEKIKDLKDFDNHAESSPLLMNDSDDSSVSDETVLTLSNLSIGLPDISRKTLVSNLNLELKIGDNLLITGSSSCGKTSLLRVLRGLWNEKSGS-YKFGRKTVIFISQKPFFTNGSLRRQVTYPLEV-VSSVSHDQFDIWIKMKLIKFGLGDLIDRVNGNLDAEPDKSWSEILSPGETQRMAIIRSLFHSPEILILDEATSALSLDMEELCYREVSYNNLITLISVGHRDSLKKFHSKHLQI 586
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12") HSP 1 Score: 63.1586 bits (152), Expect = 3.590e-10 Identity = 83/370 (22.43%), Postives = 158/370 (42.70%), Query Frame = 0 Query: 245 VIATIVNKFLMSPIMNMTSEQEK--KEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFEL-CRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAV-SAMGGATHRIGELLEIFDTSSSDESKEHGTTAIDLPRPGLAFKLSHVTVT-APGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYD--PDWNWFDV------LSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYE 601 V+A ++ L+ P + + K + + K ++L +E++ Q V++ ++ ++ V+ + + T + + S+I + A +LV + F ++ + + L SE +FVC+ L ++M P + +M A I + + ++ DE TA P A L + D++++ D+ LDI +G + + G GKSSLL AI G + G I +I+ + Q+ +V N SLK+ +L+ + D KY I E C D D P + ++ LS G+ QR++ R + + LD+ SA+ + + +Y+ Sbjct: 459 VLAGVLVMILLIPFNGFIASRTKTLQTNQMKEKDERIKLLNEVV--QGIKIVKLYAWEQSFLDIISNVRSKEVKILTHIGYLQAGNSFIWTCAPFLVSLVT----FATFILSSPENVLDSEKAFVCLTLFNILRFPLSMLPMIIGSMVLAGVSIKRINKFMNSEEIDEEAVEKKTA--YPDDKFAINLEKACLKWESDEDKNILSDVSLDIEVGSLVAVVGTVGSGKSSLLSAILGEMDKVSGLITVRGSIA--YGAQQAWVLNTSLKNNILF--------------NKSYDGDKYT---RIVEACALKSDLDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYD 801
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25") HSP 1 Score: 55.0694 bits (131), Expect = 1.078e-7 Identity = 52/186 (27.96%), Postives = 91/186 (48.92%), Query Frame = 0 Query: 425 AFKLSHVTV---TAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYP--LDAELVALTIE--QESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKC 603 A K+ +V++ T GL+ ++D+DLDI G + I G GKSSLL I G + +GSI N + ++ PQ+ ++ N +L++ +L+ + +L I+ S +DM D+ I ER + LS G+ R++ R ++ + LD+ SA+ + + R L+E Sbjct: 616 AVKMCNVSLSWETDEGLNT--LEDIDLDIEKGSLVAIVGQVGSGKSSLLSGILGEMEIVRGSI--NVDGQTIYAPQQPWLQNETLRNNILFGKRFNKKLYRRVIDACALSPDLDMLPAGDLTEIGERGIN-------------LSGGQKARVSLARCTXNNGDIYILDDPLSAVDVHVGRHLFENV 784
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000012127 (supercontig:LSalAtl2s:LSalAtl2s872:211054:214921:-1 gene:EMLSAG00000012127 transcript:EMLSAT00000012127 description:"augustus_masked-LSalAtl2s872-processed-gene-2.0") HSP 1 Score: 54.6842 bits (130), Expect = 1.487e-7 Identity = 66/235 (28.09%), Postives = 97/235 (41.28%), Query Frame = 0 Query: 887 AKNRICFICQQDFSGLPWCRLKDHVTFHFRREILALF-----PRSAKNCEVCQMTPNNMVRHLGNDHGALKKFIPTDLAILLFNRGRSGVK------------TM---------KHIRRIVGKDKMAKMSPKKLLNTVQGGQKVKEIKAPAAAFEQVFNPENMRIMLQACREKQNVCPL-CHKLVGSIRSHLGTHFGRFIVNQPKLLQDRTCQVCGKKNKTNNAA-ALHIGFTHN 1093 KN C C ++ G LK H+ H R +I F PRS C+ P++M+ H+G H +++F+P D +LF RG + TM KH++R G PK L T QG + V++ +FN E VC L CH L + +SHL +HF + ++N R C CG T++ A H+G TH+ Sbjct: 733 TKNWTCMFCYKEL-GNDKGNLKQHLLCHTRDKIRDHFMNPNNPRSCLFCDYNSNLPDHMITHVGLTHQKIREFLPRDYGDILF-RGPYAFELQPSNVAFCEHCTMEFTSVEELEKHLKRNGG--NCVWNCPKCGLKT-QGRKNVEKHTMHCQRKPSIFNCE--------------VCGLECHDLT-TFKSHLCSHFKQELMNVIGSDVSR-CDDCGIDFGTDSTGLATHVGTTHD 946
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000002016 (supercontig:LSalAtl2s:LSalAtl2s1361:43077:48755:-1 gene:EMLSAG00000002016 transcript:EMLSAT00000002016 description:"augustus_masked-LSalAtl2s1361-processed-gene-0.2") HSP 1 Score: 54.299 bits (129), Expect = 2.281e-7 Identity = 46/186 (24.73%), Postives = 85/186 (45.70%), Query Frame = 0 Query: 422 PGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSI-WTNPNISVMFMPQKTFVTNGSLKDQVLY--PLDAELVALTIE--QESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEK 602 P F + + T P + +++Q ++L+I G ++ GPS GK++L+ ++ + GS+ W P+ +V + Q+ ++ N ++KD +L P + I T ID+ + D I ER +LS G+ QRLA R + F+D S+L + ++E+ Sbjct: 724 PETCFTVENGTFAWPKCETNVLQSINLEIKTGSLTIVIGPSGSGKTALISSLIEEMDRITGSVKWNVPD-TVALLGQRPWLLNTTIKDNILLGRPFKEKRYKKVIAACDLQTDIDLLPHGDDTEIGERGV-------------LLSGGQRQRLAIARCLYSKSYCTFMDAPFSSLDSKITSHVFEE 895 HSP 2 Score: 52.373 bits (124), Expect = 8.517e-7 Identity = 66/216 (30.56%), Postives = 95/216 (43.98%), Query Frame = 0 Query: 436 PGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNP-NISVMFMPQ-KTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFER--CGHSLDYDPDW------NWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSEL--AITCVSVGHR-KTLNEYHQKILRISG-LAEDGD 637 PG+ Q L+I Q + I G S GKS+LL I L V QGSI N NI+ + + + + FV + P DA L + TI + F ++ ++ CG ++ PD D S G+ Q L ++ P V LDESTSAL E L+ E T +SV HR + EY + ++ G + EDG+ Sbjct: 1664 PGIQ----QGFSLEIPYRQKVGICGRSGSGKSTLLMGIVRLSRVLQGSITINGININAIPLSRLRKFV--------ITIPQDAVLFSGTIRSNLDPENDFSDELIWSTLDKADCGKTVRNFPDGLDTCVTENGDNFSLGQRQELNIVKALLRRPRVVILDESTSALDPNREVALHNTLLEAFEDSTLISVAHRLSNIVEYERVLVMGEGRILEDGN 1867
BLAST of abc subfamily abcd vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6") HSP 1 Score: 53.9138 bits (128), Expect = 2.717e-7 Identity = 90/407 (22.11%), Postives = 170/407 (41.77%), Query Frame = 0 Query: 217 APFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHS----ELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLI----YQFSKLVNMTPAVSAMGGATHRIGELL--EIFDTSSSDESKEHGTTAIDLPRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNP---NISVMFMPQKTFVTNGSLKDQVLYP-------LDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKC 603 P I Y I G+ G+ + F++ I N F+ + N +Q KK+ D R K L +L A++S + + + + +L ++ + + F+ L + ++ S+ +++V + + L SE FV ++L + + L ++ +++ + RI + L E + S H AI + P + + G SL +D+ +D+ G + I GP GKSSL+ A+ G + S TNP + SV + PQ ++ N S+KD +L+ D L A ++E + ++ F D I E+ + LS G+ QR++ R + + FLD+ + + + + L+E+ Sbjct: 951 GPLQIIAAIYLLINTLGYSALAGVLVMFLLIPI-NGFIAVRMKNAQMKQMKKK-DERVKKMNEILQGIKIIKLYAWESSFSKLISSIRFEEIKLLKLSSKYFG---FMMLTISSTTFFISLFTFIVYVV----------SDPENHILDSEKIFVSISLFNILRFPLNMLTHVIGGIASASVSLKRINKFLASEELEEGILVRSNSHDHQAICI-HP-------SSSFSWKGSSESLFKDISMDVNRGNLIAIIGPVGSGKSSLISALLG--EMLFTSKGTNPVEIHGSVAYTPQNAWMQNVSVKDNILFGRKFNKNWYDEVLKACSLESD---MEXFPSGDSTEIGEKGIN-------------LSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEV 1316
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|338817849|sp|O89016.2|ABCD4_MOUSE (RecName: Full=ATP-binding cassette sub-family D member 4; AltName: Full=PMP70-related protein; Short=P70R; AltName: Full=Peroxisomal membrane protein 1-like; Short=PXMP1-L; AltName: Full=Peroxisomal membrane protein 69; Short=PMP69) HSP 1 Score: 439.499 bits (1129), Expect = 1.809e-140 Identity = 236/577 (40.90%), Postives = 351/577 (60.83%), Query Frame = 0 Query: 69 FIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLE-IFDTS-SSDESKEHGTTAIDLPR-PGL--------AFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNI---SVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 +QR ++ + FPSW+S +++ + LL V +E+ + Y VGLI S YY +LG+KD D F T +++ +I+L S + + + ++ V+ R+ LT + LY + + +Y +NVL R +DN DQRI+ D+ FC + V S LII+PF + YY Y GW+GP +F +F++ T+VNK LM PI+ +QEK EGDFR+KH +R+++E AF VE +T +L L + QR L + + +L + F Y+GSI SY+VIAIPIF G Y L T+LS L+S+N+FVC+ LI F++L++++ +S + G THRIGEL E + D S S + + G + DL + PG AF L V++ AP D+ LI+DL L I GQ+LLITG + GK+SLLR + GLW +GS+ + V+F+PQK F T+G+L++QV+YPL + I+ + + + R G LD DWNW+DVLSPGE+QRL+F RLF+ P A LDE+TSAL+ E +LY +L +T +SVGHR +L ++H +LR+ G Sbjct: 20 LVQRFVRIQKVFFPSWSSQNVLMFMTLLCVTLLEQLVIYQVGLIPSQYYGVLGNKDLDGFKALTLLAVTLIVLNSTLKSFDQFTCNLLYVSWRKDLTEHLHHLYFRARVYYTLNVL-RDDIDNPDQRISQDVERFCRQLSSVTSKLIISPFTLTYYTYQCFQSTGWLGPVSIFGYFIVGTMVNKTLMGPIVTKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGLVEHMRTDRRLQRLLQTQRELMSRELWLYIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCIYLISCFTQLIDLSTTLSDVAGYTHRIGELQEALLDMSRKSQDCEALGESEWDLDKTPGCPTTEPSDTAFLLDRVSILAPSSDKPLIKDLSLKICEGQSLLITGNTGTGKTSLLRVLGGLWEGMKGSVQMLADFGPHGVLFLPQKPFFTDGTLREQVIYPLKEIYPDSGSADDERIVRFLELAGLSSLVARTG-GLDQQVDWNWYDVLSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEAESELYRIGQQLGMTFISVGHRPSLEKFHSWVLRLHG 594
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|6831464|sp|O14678.1|ABCD4_HUMAN (RecName: Full=ATP-binding cassette sub-family D member 4; AltName: Full=PMP70-related protein; Short=P70R; AltName: Full=Peroxisomal membrane protein 1-like; Short=PXMP1-L; AltName: Full=Peroxisomal membrane protein 69; Short=PMP69) HSP 1 Score: 428.328 bits (1100), Expect = 3.004e-136 Identity = 231/578 (39.97%), Postives = 353/578 (61.07%), Query Frame = 0 Query: 69 FIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLE-IFDTSSSDESKE---HGTTAIDLPRPGL--------AFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNI---SVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 F+QR ++ + LFPSW+S ++ + LL + +E+++ Y VGLI S YY +LG+KD + F TF+++ +I+L S + + + ++ V+ R+ LT + +LY + + +Y +NVL R +DN DQRI+ D+ FC + + S LII+PF + YY Y GW+GP +F +F++ T+VNK LM PI+ QEK EGDFR+KH +R+++E AF VE +T +L L + QR L + + +L + F Y+GSI SY+VIAIPIF G Y L +LS L+S+N+FVC+ LI F++L++++ +S + G THRIG+L E + D S + E +D P PG AF L V+++AP D+ LI+DL L I GQ+LLITG + GK+SLLR + GLW +GS+ + V+F+PQK F T+G+L++QV+YPL + I+ + + ++ R LD DWNW+DVLSPGE+QRL+F RLF+ P A LDE+TSAL+ +E +LY +L +T +SVGHR++L ++H +L++ G Sbjct: 20 FLQRFLQILKVLFPSWSSQNALMFLTLLCLTLLEQFVIYQVGLIPSQYYGVLGNKDLEGFKTLTFLAVMLIVLNSTLKSFDQFTCNLLYVSWRKDLTEHLHRLYFRGRAYYTLNVL-RDDIDNPDQRISQDVERFCRQLSSMASKLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFILGTVVNKTLMGPIVMKLVHQEKLEGDFRFKHMQIRVNAEPAAFYRAGHVEHMRTDRRLQRLLQTQRELMSKELWLYIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPAELSTLVSKNAFVCIYLISCFTQLIDLSTTLSDVAGYTHRIGQLRETLLDMSLKSQDCEILGESEWGLDTP-PGWPAAEPADTAFLLERVSISAPSSDKPLIKDLSLKISEGQSLLITGNTGTGKTSLLRVLGGLWTSTRGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKEVYPDSGSADDERILRFLELAGLSNLVART-EGLDQQVDWNWYDVLSPGEMQRLSFARLFYLQPKYAVLDEATSALTEEVESELYRIGQQLGMTFISVGHRQSLEKFHSLVLKLCG 594
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|75018090|sp|Q8T8P3.1|ABCD2_DICDI (RecName: Full=ABC transporter D family member 2; AltName: Full=ABC transporter ABCD.2) HSP 1 Score: 213.001 bits (541), Expect = 1.652e-56 Identity = 165/636 (25.94%), Postives = 290/636 (45.60%), Query Frame = 0 Query: 69 FIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRI-WLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRG-YVDNSDQRITADIGTFCMTYAYVMSDLIIAPFI-IAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCF-SYIGSIASYLVIAIPIFGGFYDY--LDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEI--------------------------------FDTS-----------------------SSDESKEHGTTAI---DLPRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYPL---DAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNW------FDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 F +RLAK+ R + PS S + ++ L + + + I+ Q L + + ++ + ++ + + + + + +M+ + R++L+ V K YL+ NFY + LG +DN+DQR+T+DI FC + + + + L PF+ + + + GW P MF +F+++ + K +M P +T++Q + EG++R H L ++E +AF + E + ++ + ++ + +F Y SI Y + +PI+ G D T+L+ N+ + + L +LV + V+ M G T R+ ELLE+ +DTS S+ S G T + G K +V++ +P + L+++LD ++ QN++ITGP+ GKSSL R + LW + G++ ++F+PQK ++ G+L+DQ++YP D + + +T + D+ H+ +L WNW F LS G+ QR+A RLF+H P A LDE TSA+S +E K+YE C +L IT +V HR L YH +L +G Sbjct: 99 FFRRLAKIIRIVIPSLKSKEFLSLLYLTALLFARTMLSVSIAEIAGKNAQNLVARKWKE-MRNGVLKFALVSIPASFVNASLKYETDMLALRFRKRLSEYVHKEYLEGVNFYKASHLGGADRIDNADQRVTSDIEQFCNSMSSLYTTLF-KPFLDLVLFTRKLVVVMGWGSPLLMFSYFIVSGFLKKLIMPPFGRLTAKQSELEGNYRTVHQRLITNAEEIAFYDGSRKERQIINLSFGDIYNHTGYVSYLKCLVGIFDGFLVKYCASIVGYGCMVLPIYTGIRGSSGKDSTELTKDYIRNTQLMVALSQAIGQLVLLGNKVTLMAGYTSRVSELLEMIKSIKERGTSQFTIVHEDDVPNPLTNSPVNDKYDTSVDMSSWLEDWRKRSDQTRIVKRQQSNRSSASGATTVYGGGTFVEGDFIKFENVSIVSPE-GKLLVENLDFQVMPNQNVMITGPNGSGKSSLFRILGELWPLHCGTVIKPRKEDILFVPQKPYLVLGTLRDQIIYPHSHDDMKKLGVTDD------------DLQHLLATVDPNLTIIRQWNWDDTKDWFTALSGGQKQRIAMARLFYHRPQYAILDECTSAVSDEVEGKIYETCKKLGITLFTVSHRPQLRAYHDYVLLFNG 719
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|130359|sp|P16970.3|ABCD3_RAT (RecName: Full=ATP-binding cassette sub-family D member 3; AltName: Full=70 kDa peroxisomal membrane protein; Short=PMP70) HSP 1 Score: 210.305 bits (534), Expect = 4.477e-56 Identity = 182/615 (29.59%), Postives = 295/615 (47.97%), Query Frame = 0 Query: 68 TFIQRLAKLHRFLFPSW---ASATLILIVILLIVRGVEEYIGYHVG-LISSAYYQILG--DKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFI-IAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCF------SYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISE-------NSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIFD-----------TSSSDESKEHGTTAIDLPRPGLAF------KLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIID--MFKYLD---MFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISGLAEDGDRGN 640 F+ RL+++ + + P + LILI ++L+ R + G LI S I+G KDF ++ F + + LIS+V + L + + R +LT + + YLQ +Y + L + N DQ +T D+ FC + + S+L PF+ I Y + + G GP M + +++ + L PI MT ++K EG++R+ ++ L +SE +AF + E ++T +F ++ L+N F F F YI ++ YLV++ P F D L + SE + + + + ++V ++ + G T RI EL+++ S D+ E + +P G K HV + P D LIQDL ++ G N+LI GP+ CGKSSL R + LW + G + + ++PQ+ ++T G+L+DQV+YP E +++ I D + YLD + HI ER G +D +W DVLS GE QR+A RLF+H P A LDE TSA+S+ +E +Y C ++ IT +V HRK+L ++H+ L + G RGN Sbjct: 62 VFLSRLSQILKIMVPRTFCKETGYLILIAVMLVSRTYCDVWMIQNGTLIESG---IIGRSSKDFKRYL---FNFIAAMPLISLVNNFLKYGLNELKLCFRVRLTRYLYEEYLQAFTYYKMGNLD-NRIANPDQLLTQDVEKFCNSVVDLYSNLS-KPFLDIVLYIFKLTSAIGAQGPASMMAYLLVSGLFLTRLRRPIGKMTIMEQKYEGEYRFVNSRLITNSEEIAFYNGNKRE-KQTIHSVFR--KLVEHLHNFIFFR--FSMGFIDSIIAKYIATVVGYLVVSRP----FLDLAHPRHLHSTHSELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITELMQVLKDLNHGKYERTMVSQQDKGIEGAQASPLIPGAGEIINADNIIKFDHVPLATPNGD-ILIQDLSFEVRSGANVLICGPNGCGKSSLFRVLGELWPLFGGHLTKPERGKLFYVPQRPYMTLGTLRDQVIYPDGKE-----DQKKKGISDQVLKGYLDNVQLGHILEREG---GWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHMDG------RGN 644
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|338817848|sp|P55096.2|ABCD3_MOUSE (RecName: Full=ATP-binding cassette sub-family D member 3; AltName: Full=68 kDa peroxisomal membrane protein; Short=PMP68; AltName: Full=70 kDa peroxisomal membrane protein; Short=PMP70) HSP 1 Score: 209.149 bits (531), Expect = 9.399e-56 Identity = 178/611 (29.13%), Postives = 289/611 (47.30%), Query Frame = 0 Query: 68 TFIQRLAKLHRFLFPSW---ASATLILIVILLIVRGVEEYIGYHVG-LISSAYYQILG--DKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFI-IAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCF------SYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISE-------NSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIFD----------TSSSDESKEHGTTAIDLPRPGLA--------FKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISGLAEDGDRGN 640 F+ RL+++ + + P + L+LI ++L+ R + G LI S I+G KDF ++ F + + LIS+V + L + + R +LT + + YLQ +Y + L + N DQ +T D+ FC + + S+L PF+ I Y + + G GP M + +++ + L PI MT ++K EG++RY ++ L +SE +AF + E ++T +F ++ L+N F F F Y+ ++ YLV++ P F D L + SE + + + + ++V ++ + G T RI EL+++ S E G A L PG K HV + P D LIQDL ++ G N+LI GP+ CGKSSL R + LW + G + + ++PQ+ ++T G+L+DQV+YP E + + + + + HI ER G +D +W DVLS GE QR+A RLF+H P A LDE TSA+S+ +E +Y C ++ IT +V HRK+L ++H+ L + G RGN Sbjct: 62 VFLSRLSQILKIMVPRTFCKETGYLLLIAVMLVSRTYCDVWMIQNGTLIESG---IIGRSSKDFKRYL---FNFIAAMPLISLVNNFLKYGLNELKLCFRVRLTRYLYEEYLQAFTYYKMGNLD-NRIANPDQLLTQDVEKFCNSVVDLYSNLS-KPFLDIVLYIFKLTSAIGAQGPASMMAYLLVSGLFLTRLRRPIGKMTIMEQKYEGEYRYVNSRLITNSEEIAFYNGNKRE-KQTIHSVFR--KLVEHLHNFIFFR--FSMGFIDSIIAKYVATVVGYLVVSRP----FLDLAHPRHLHSTHSELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITELMQVLKDLNHGRYERTMVSQQEKGIEGAQASPLV-PGAGEIINTDNIIKFDHVPLATPNGD-ILIQDLSFEVRSGANVLICGPNGCGKSSLFRVLGELWPLFGGRLTKPERGKLFYVPQRPYMTLGTLRDQVIYPDGKEDQKKRGISDQVLKEYLDNVQLGHILEREG---GWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEDYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHMDG------RGN 644
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|130358|sp|P28288.1|ABCD3_HUMAN (RecName: Full=ATP-binding cassette sub-family D member 3; AltName: Full=70 kDa peroxisomal membrane protein; Short=PMP70) HSP 1 Score: 209.149 bits (531), Expect = 9.487e-56 Identity = 186/619 (30.05%), Postives = 296/619 (47.82%), Query Frame = 0 Query: 68 TFIQRLAKLHRFLFPSW---ASATLILIVILLIVRGVEEYIGYHVG-LISSAYYQILGD--KDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFI-IAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCF------SYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAV----------SAMGGATHRIGELLEIFD----------TSSSDESKEHGTTAIDLPRPGLA--------FKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMF--KYLD---MFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISGLAEDGDRGN 640 F RL ++ + + P + L+LI ++L+ R + G LI S I+G KDF ++ FI+ + LIS+V + L + + R +LT + + YLQ +Y + L + N DQ +T D+ FC + + S+L PF+ I Y + + G GP M + V++ + L PI MT ++K EG++RY ++ L +SE +AF + E ++T +F ++ L+N F F F Y+ ++ YLV++ P +LD + L S +S + + L+ M+ A+ + + G T RI EL+++ S E G I L PG K HV + P D LI+DL+ ++ G N+LI GP+ CGKSSL R + LW + G + + ++PQ+ ++T G+L+DQV+YP E ++ I D+ +YLD + HI ER G +D +W DVLS GE QR+A RLF+H P A LDE TSA+S+ +E +Y C ++ IT +V HRK+L ++H+ L + G RGN Sbjct: 62 VFFSRLIQILKIMVPRTFCKETGYLVLIAVMLVSRTYCDVWMIQNGTLIESG---IIGRSRKDFKRYL-LNFIA--AMPLISLVNNFLKYGLNELKLCFRVRLTKYLYEEYLQAFTYYKMGNLD-NRIANPDQLLTQDVEKFCNSVVDLYSNLS-KPFLDIVLYIFKLTSAIGAQGPASMMAYLVVSGLFLTRLRRPIGKMTITEQKYEGEYRYVNSRLITNSEEIAFYNGNKRE-KQTVHSVFR--KLVEHLHNFILFR--FSMGFIDSIIAKYLATVVGYLVVSRP-------FLDLSHPRHLKSTHSELLEDYYQSGRMLLRMSQALGRIVLAGREMTRLAGFTARITELMQVLKDLNHGKYERTMVSQQEKGIEGVQVIPLI-PGAGEIIIADNIIKFDHVPLATPNGD-VLIRDLNFEVRSGANVLICGPNGCGKSSLFRVLGELWPLFGGRLTKPERGKLFYVPQRPYMTLGTLRDQVIYPDGRE-----DQKRKGISDLVLKEYLDNVQLGHILEREG---GWDSVQDWMDVLSGGEKQRMAMARLFYHKPQFAILDECTSAVSVDVEGYIYSHCRKVGITLFTVSHRKSLWKHHEYYLHMDG------RGN 644
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|2492597|sp|Q55774.1|Y182_SYNY3 (RecName: Full=Uncharacterized ABC transporter ATP-binding protein sll0182) HSP 1 Score: 203.756 bits (517), Expect = 7.196e-54 Identity = 145/492 (29.47%), Postives = 246/492 (50.00%), Query Frame = 0 Query: 151 WLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGY--VDNSDQRITADIGTFC-MTYAYVM----SDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIFDTSSSDESKEHGTTAID----LPRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 +L + + V R+ LT Y + +++Y ++ Y +DN DQRIT DI +F +T +++ S L + F Y G +G + V T+V + + ++ + EQ + E +FRY +R ++E +AF +E ++ ++L R L Q ++LF+ ++Y + Y++IA G D+ I++ S ++ S + N ++ + +R+GE E + S+E + +T D R G L +VT++ P R L++DL L + G +LLI GPS GKSSLLRAI GLW+ QG+I ++F+PQ+ ++ G+L++Q++YP A +I + +++ +++ + ER G D NW VLS GE QR+A R+F + P A LDE+TSAL + E +LY ++L T +SVGHR TL +H++ L + Sbjct: 182 YLRQKLGVLWRQWLTEHFLGRYFKGRSYYHLDS-NSAYTLIDNPDQRITQDIQSFTGVTLDFLLDILDSILTLISFTAILYTISQTLMWGLIG------YAVFGTVVAIAIGTRLIRINYEQLRLEANFRYGLVRVRDNAESIAFYRGEGLERKQVTDRLLGAIRNFNLLIIWQALISLFQLGYNYFTRLIPYIIIAPLYLAGDLDF-------GAIAQASLAFGMVLSALSLVTNQIQNITEFAASINRLGEFYESLN-GPSNELERPESTGFDHNVITTRIGATVALENVTLSPPNSSRILVRDLSLAVAPGNHLLIMGPSGSGKSSLLRAIAGLWDSGQGTIERPELADLLFLPQRPYMILGTLREQLIYP-----SAQSIADDDFLLETLNKVNLPDLAERFG---GLDSLENWSSVLSLGEQQRIALARVFINQPRYAILDEATSALDVNNEAELYHALTDLGTTFISVGHRPTLRNFHRQCLEVQA 650
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|12643305|sp|Q9UBJ2.1|ABCD2_HUMAN (RecName: Full=ATP-binding cassette sub-family D member 2; AltName: Full=Adrenoleukodystrophy-like 1; AltName: Full=Adrenoleukodystrophy-related protein; Short=hALDR) HSP 1 Score: 197.978 bits (502), Expect = 1.682e-51 Identity = 172/638 (26.96%), Postives = 299/638 (46.87%), Query Frame = 0 Query: 64 GFNWTFIQRLAKLHRFLFPSWASAT---LILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLE-MIVVAARRQLTGAVQKLYLQNKNFYWV-NVLGRGYVDNSDQRITADIGTFCMTYAYVMSDL---IIAPFIIAYYAYDAITRAGW--VGPTGMFLFFVIATI-VNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCR-----VQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFG--GFYDYLDGTDLSALISENS---FVCMNLIYQ----FSKLVNMTPAVSAMGGATHRIGELLEIFD---------TSSSDESKEHGTTAIDLPRP--------GLAFKLSH------VTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISGLAEDGDRGN--DNNVRWTIQND 651 G N F ++L +L + LFP + L L + LI R ++ +V + + + +K F+ + I MI + + + I LE + +A R +L + Y N+ +Y V N+ GR + N DQ +T DI F + A++ S+L I+ + +Y T G +GPT + V AT V K + +E+ ++G RY H+ + + E +AF VEM++ ++ L + +RL+ ++ + + Y+ S + +++AIPI GF D DG ++SE + NL+ ++++ V+ + G T R+ + +FD T+ ES+ H + P G + H V + P + L+ + G +LLITGP+ CGKSSL R + GLW V +G ++ P + ++PQ+ +++ GSL+DQV+YP + + + + + + ++HI +R G +D +W DVLS GE QR+ R+F+H P A LDE TSA+S+ +E K+++ I+ +S+ HR +L +YH +L+ G E G R D +R T+ + Sbjct: 79 GVNADFFKQLLELRKILFPKLVTTETGWLCLHSVALISR---TFLSIYVAGLDGKIVKSIVEKKPRTFIIK-LIKWLMIAIPATFVNSAIRYLECKLALAFRTRLVDHAYETYFTNQTYYKVINMDGR--LANPDQSLTEDIMMFSQSVAHLYSNLTKPILDVMLTSYTLIQTATSRGASPIGPTLLAGLVVYATAKVLKACSPKFGKLVAEEAHRKGYLRYVHSRIIANVEEIAFYRGHKVEMKQLQKSYKALADQMNLILSKRLW----YIMIEQFLMKYVWSSSGLIMVAIPIITATGFADGEDGQK-QVMVSERTEAFTTARNLLASGADAIERIMSSYKEVTELAGYTARVYNMFWVFDEVKRGIYKRTAVIQESESHSKNGAKVELPLSDTLAIKGKVIDVDHGIICENVPIITPA-GEVVASRLNFKVEEGMHLLITGPNGCGKSSLFRILSGLWPVYEGVLYKPPPQHMFYIPQRPYMSLGSLRDQVIYPDSVDDMHDKGYTDQDLERILHNVHLYHIVQREG---GWDAVMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAKGAGISLLSITHRPSLWKYHTHLLQFDG--EGGWRFEQLDTAIRLTLSEE 699
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|78099209|sp|Q61285.1|ABCD2_MOUSE (RecName: Full=ATP-binding cassette sub-family D member 2; AltName: Full=Adrenoleukodystrophy-related protein) HSP 1 Score: 194.126 bits (492), Expect = 3.631e-50 Identity = 171/639 (26.76%), Postives = 302/639 (47.26%), Query Frame = 0 Query: 64 GFNWTFIQRLAKLHRFLFPSWASAT---LILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEM-IVVAARRQLTGAVQKLYLQNKNFYWV-NVLGRGYVDNSDQRITADIGTFCMTYAYVMSDL---IIAPFIIAYYAYDAITRAGW--VGPTGMFLFFVIATI-VNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQ------RRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFG--GFYDY-LDGTDLSALISENS---FVCMNLIYQ----FSKLVNMTPAVSAMGGATHRIGELLEIFDT--------SSSDESKEHGTTAIDLPRP--------GLAFKLSH------VTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISGLAEDGDRGN--DNNVRWTIQND 651 G N F ++L +L + LFP + L L + LI R ++ +V + + + +K F+ + I MI + + + I LE + +A R +L + Y N+ +Y V N+ GR + N DQ +T DI F + A++ S+L I+ + +Y T G +GPT + V AT V K ++ +E+ ++G RY H+ + + E +AF VEM++ +K ++ Q +RL+ ++ + + Y+ S +++AIPI GF D L+ A++S+ + NL+ ++++ ++ + G T R+ + +FD + + E + H +L P G + H V + P + L+ + G +LLITGP+ CGKSSL R + GLW V +G ++ P + ++PQ+ +++ GSL+DQV+YP A+ + + + + + ++HI +R G +D +W DVLS GE QR+ R+F+H P A LDE TSA+S+ +E K+++ I+ +S+ HR +L +YH +L+ G E G R D +R T+ + Sbjct: 79 GLNAAFFKQLLELRKILFPKLVTTETGWLCLHSVALISR---TFLSIYVAGLDGKIVKSIVEKKPRTFIIK-LIKWLMIAIPATFVNSAIRYLECKLALAFRTRLVDHAYETYFANQTYYKVINMDGR--LANPDQSLTEDIMMFSQSVAHLYSNLTKPILDVILTSYTLIRTATSRGASPIGPTLLAGLVVYATAKVLKACSPKFGSLVAEEAHRKGYLRYVHSRIIANVEEIAFYRGHKVEMKQL-QKCYKALAYQMNLILSKRLW----YIMIEQFLMKYVWSSCGLIMVAIPIITATGFADGDLEDGPKQAMVSDRTEAFTTARNLLASGADAIERIMSSYKEITELAGYTARVYNMFWVFDEVKRGIYKRTVTQEPENHSKRGGNLELPLSDTLAIKGTVIDVDHGIICENVPIITPA-GEVVASRLNFKVEEGMHLLITGPNGCGKSSLFRILSGLWPVYEGVLYKPPPQHMFYIPQRPYMSLGSLRDQVIYPDSADDMREKGYTDQDLERILHSVHLYHIVQREG---GWDAVMDWKDVLSGGEKQRMGMARMFYHKPKYALLDECTSAVSIDVEGKIFQAAIGAGISLLSITHRPSLWKYHTHLLQFDG--EGGWRFEQLDTAIRLTLSEE 700
BLAST of abc subfamily abcd vs. SwissProt
Match: gi|75324320|sp|Q6NLC1.1|AB2D_ARATH (RecName: Full=ABC transporter D family member 2, chloroplastic; Short=ABC transporter ABCD.2; Short=AtABCD2; Flags: Precursor) HSP 1 Score: 191.045 bits (484), Expect = 2.018e-49 Identity = 175/632 (27.69%), Postives = 278/632 (43.99%), Query Frame = 0 Query: 75 KLHRFLFPSWAS-----ATLILIVILLIVRGVEEYIGYHVGL--ISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVI----ATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEM-------RKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIFD-------TSSSDE-----SKEHGTTAIDL-----PRPGLA-FKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSI--WTNPNIS-----------------VMFMPQKTFVTNGSLKDQVLYPLDAELVALTI------------------EQESTIIDMFKYLD---MFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRIS 630 K ++ P W S A L L + + G VG + +Y L +KD + F KQ F L LR + E + + R +T + YL+++ FY + + +DN DQR+ D+ +F T L+ A + ++ T + P +FL ++ T ++ FL ++N+ QEKKE DFRY +R ++E +AF EM R + L EL R L F + Y+ I V+A F G ++ +I+++ +++ FS +V A+S+ R+GE ++ D + + DE E ++ +D +P ++ +T+ P +L+ +L D+ +LLI GPS GK+SLLRA+ GLW +G I + +P + V+F+PQ+ ++ GSL+ Q+LYP + V T ++ T D+ + L+ + HI +R G D W VLS GE QRLAF RL P +A LDESTSAL A E LY++ IT +S+GHR+TL ++H KIL+IS Sbjct: 67 KFYKVASPYWFSEDKDQARLRLAAVFALTLAT---TGISVGFNFLGRDFYNSLANKDQEQFTKQLFYYLCAFAGGIPFFVLRDYTKETLSLRWRSWMTKYYLQRYLKDQTFY--KIQSQSIIDNPDQRLVDDLSSFTGTALSFSLTLVNATIDLISFSNILFT----IYPP-LFLVLLLYSFGGTAISVFLGKGLVNLNFLQEKKEADFRYSLVRVRENAESIAFYGGEQNEMQLLLQRFRSAFDNLTELLIASRNL-------EFFTDGYRYLIQILPVAVVAPMYFSGKIEF-------GVINQSVSAFNHILGDFSLVVYQFQAISSFSAVIDRLGEFDDLLDNNIFRDPSDTVDEIELTYQSEMNSSLLDTNGSIKSQPNQKRLEIEELTLQTPTNGTTLVHNLSADVYDKDHLLIMGPSGSGKTSLLRAMAGLWRSGKGKITFYLDPEVDFTQEKSDTQENSGKRGDVLFLPQRPYMVLGSLRQQLLYPTWSATVEETTPGGSNIDGSPPLLIREDGNEKPTTDDLMRTLEKVCLGHIADRFGG---LDSIHEWSSVLSLGEQQRLAFARLLLSQPKLALLDESTSALDEANEAFLYQQIQSAGITYISIGHRRTLTKFHNKILQIS 671
BLAST of abc subfamily abcd vs. nr
Match: gi|586962538|gb|AHK05657.1| (ATP-binding cassette transporter sub-family D member 4 isoform X1 [Tigriopus japonicus]) HSP 1 Score: 724.546 bits (1869), Expect = 0.000e+0 Identity = 336/595 (56.47%), Postives = 451/595 (75.80%), Query Frame = 0 Query: 59 VETYNGFNWTFIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIFDTSSSDESKEH--GTTAIDLPRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISGLAEDGDRGNDN-NVRWTIQN 650 V Y GFNW F+ R+ KLH+FLFPSW S + L V +L+VR +EEY+GY+VGLISS YYQ+LGDKDFDAFV+ T SLGMI+LI+ + T RIW EMIVV+ R +T + + Y Q+ +FY +N+LGRG++ N+DQRITAD+ +FC TY ++++D++++P I YY YDA TRAGW+GP GMFLFFVI+T++NK LMSP++N ++EQ+K+EG+FR++H + R+HSE LAFQ + V + K + L LCR QRR++N+Q FLNL F Y+ SIAS+LVIA+P+F G YD L G++LS+LISEN+FVC+NLIYQFSKLVN++P VS MGGA HRI EL+E F + D + ++ G P +AF+L++V V +PG+DR LI+DL LDI LGQNLL+ GPSSCGKSSLLR I+GLW + G+I NP++ +++PQ+ ++ +GSLK+ VL+P+D +LTIE E I D+ + HI ERCG +LDYDP WNW DV+SPGELQRLAFIRLF+H P++AFLDESTSALSL++E KLYEKCS++ ITCVSVGHR+TL +YH KIL I ++ + N N WT+++ Sbjct: 8 VVKYYGFNWQFLVRVTKLHKFLFPSWTSIPVFLFVFILLVRCLEEYVGYYVGLISSDYYQVLGDKDFDAFVQVTLKSLGMIVLIAFIKTTRIWFQEMIVVSWRLAMTTTLNQKYFQHHSFYHINILGRGFLGNADQRITADVSSFCSTYGFIIADILVSPLTIGYYTYDAYTRAGWIGPLGMFLFFVISTVINKLLMSPVVNASAEQDKQEGEFRFQHVSTRIHSESLAFQDGSEVNLEKIQGSLRRLCRSQRRVFNLQFFLNLATNLFQYVSSIASFLVIAVPLFSGAYDDLTGSELSSLISENAFVCINLIYQFSKLVNISPYVSEMGGAAHRIAELIETFQSLEMDHANKNRDGIGMSPYLDPKVAFRLTNVDVRSPGMDRPLIKDLSLDIELGQNLLVMGPSSCGKSSLLRVIKGLWPISNGAIEVNPDLKAIYLPQRPYMMSGSLKELVLHPIDTLQCSLTIEDEQRIKDLVTEFGLDHILERCGGNLDYDPQWNWSDVMSPGELQRLAFIRLFYHKPALAFLDESTSALSLSVEEKLYEKCSKMGITCVSVGHRETLKKYHTKILEIKEESDHNASTHVNTNALWTLRD 602
BLAST of abc subfamily abcd vs. nr
Match: gi|586962540|gb|AHK05658.1| (ATP-binding cassette transporter sub-family D member 4 isoform X2 [Tigriopus japonicus]) HSP 1 Score: 543.117 bits (1398), Expect = 9.131e-178 Identity = 268/596 (44.97%), Postives = 389/596 (65.27%), Query Frame = 0 Query: 60 ETYNGFNWTFIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIF--------------DTSSSDESKEHGTTAIDLPRPGL------AFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTN-PNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISGLAE 634 + + GFN +++R +LH LFP W S L+V+L+I+ G+E+++ +VGLIS YY++LGD+D+ F T + I+ + + ++R+++ ++ V RR LT A+ ++Y +Y +NVL +DN DQRITAD+ C +Y +++DLI+ PF I+YY Y A TRAG GPTGMFLFF+ +TI+NK LMSP++ +T EQE++EGDFR+KH T+R H+E LAF VE K+ EKL LC+ Q+ L+N Q L+L FSY+GSIAS+LVIAIPIF G YD L + L+ +SEN+FVCM L++QF+KLV M VS + G THRI E+ E+ +S DE ++ + P+P + L +V + P + LI++L+L + LG NLLI G SS GKSSLLR I GLW + +G I N ++ V F+PQ+ F T+G+L++Q++YPL + ++ ++++ + + + + +RCG SLD DP W+W+D LSPGE+QRLAFIRLF+H P +AFLDESTSALSL +E LY+KC E I VSVGHR+TL +YH ++L I GL++ Sbjct: 3 DNHYGFNTLYLRRFYRLHGLLFPGWRSLNAALMVLLVILSGLEQWLALYVGLISGGYYKVLGDQDWSGFKTTTLDATLKIMAMVITKSVRVYVTNVMTVGWRRSLTMALHQMYFARIRYYRLNVLDESGLDNPDQRITADVSLLCQSYGSIIADLIVVPFTISYYTYSAYTRAGPAGPTGMFLFFLASTIINKLLMSPVVRLTVEQERREGDFRFKHVTVRTHAESLAFHKSARVESIKSDEKLLSLCQTQQSLFNRQLALDLATNVFSYMGSIASFLVIAIPIFSGVYDNLSPSQLAQAVSENAFVCMYLVFQFTKLVQMASTVSRLAGVTHRIAEMTEVLINMNRSFHCQGRKSSNNSEDEDQDKLVAVVPDPKPSESPLKNHSLILENVDLITPKSRKKLIRNLNLALDLGSNLLIVGQSSAGKSSLLRVIAGLWPLDRGVIQRNLSDLDVFFLPQQPFFTDGTLREQIVYPLQVLTSQIDPQESVDLLNILEEVGLGDLPKRCGGSLDTDPKWSWYDKLSPGEMQRLAFIRLFYHCPKMAFLDESTSALSLDLEDLLYKKCLEKNIALVSVGHRETLRQYHDQLLTI-GLSD 597
BLAST of abc subfamily abcd vs. nr
Match: gi|1022773295|gb|KZS17405.1| (ABC protein, subfamily ABCD [Daphnia magna]) HSP 1 Score: 470.315 bits (1209), Expect = 9.878e-150 Identity = 249/586 (42.49%), Postives = 370/586 (63.14%), Query Frame = 0 Query: 63 NGFNWTFIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLE----IFDTSSSDE----------SKEHGTTAIDLPRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSI---WTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 +GFN F +R +L LFP S L L +LL+V ++E+I Y VGLI S +YQ+LG+KD F+ QT S+G+IL ++V ++ ++ +++ + R+ LT AV +LY + N+Y +NVL + +VDN DQRITADI C+ ++ V ++++PF IAYY+Y A GWVGPT FLFF++ T VNK LMSPI+ E++EGDFRYKH +R ++E LAF + +E KT KL L Q LY Q FLNL F Y+GSI SYL +A+PIF G YD L +LSALIS+N+FVC+ LI FS LV+++ +V+ + G THR+ EL+E ++D S ++ K T D+ + G + + V APG L+++L L + G++LLITG SS GK+SLLR +RGLW + +G++ T V+F+PQK ++T+G+L++Q+ +PL +L + ++ ++ + + + R G LD +WNW+DVLSPGE+QRL+FIRL +H P++AFLDE+TSAL + ME+ LY + IT +SVGHR++L +H+ +L + G Sbjct: 13 HGFNVNFFRRFWRLQHLLFPGVFSLPLGLFSLLLLVALLDEFIIYGVGLIPSGFYQVLGEKDLPGFINQTLRSVGIILAVAVNKAIKTYISQVLNLTWRQLLTRAVHRLYFTDINYYQLNVLDK-FVDNPDQRITADINILCLVFSSVAIKVVVSPFTIAYYSYKAYVGTGWVGPTSCFLFFIVGTFVNKLLMSPIVAWVVRNERREGDFRYKHMQIRSNAESLAFLTGARLEESKTNNKLDLLLTTQHSLYGRQFFLNLAVNMFDYLGSIISYLALAVPIFSGRYDGLSSAELSALISQNAFVCIYLISTFSTLVDLSSSVTQLAGVTHRVSELIERLQQLYDRSDAETPGDLKVVSVCKKNSVGTMDDMKQEG--YLMEGVAFKAPGRSEDLVKELYLHLRPGESLLITGSSSAGKTSLLRLLRGLWKLNRGTLTAHCTPGPCGVLFLPQKPYLTDGTLREQITFPLSVDLDLIPNDETEELLSYLHKMKLDGLMTRIG-GLDRPAEWNWYDVLSPGEMQRLSFIRLLYHKPAMAFLDEATSALDMEMEQLLYSAAVDKGITLISVGHRESLRAFHKNLLHLKG 594
BLAST of abc subfamily abcd vs. nr
Match: gi|321453858|gb|EFX65057.1| (ABC protein, subfamily ABCD [Daphnia pulex]) HSP 1 Score: 458.759 bits (1179), Expect = 1.572e-145 Identity = 250/575 (43.48%), Postives = 376/575 (65.39%), Query Frame = 0 Query: 63 NGFNWTFIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIFDTSSSDES---KEHGTTAIDLPRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSI---WTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 +GFN +F +R +L LFP S L L +LL+V ++E+I Y VGLI S +YQ+LG+KDF F+ QT S+G+IL ++V ++ ++ +++ + R+ LT AV +LY N+Y +NVL + +VDN DQRITADI C+ ++ V ++++PF I+YY+Y A GWVGPT FLFF++ T+VNK LMSPI+ + E++EGDFRYKH +R ++E LAF + +E KT KL L + Q LY Q FLNL F Y+GSI SYL +A+PIF G YD + +LS+LIS+N+FVC+ LI FS LV+++ +V+ + G THR+ EL+E+ +++ + + E T G+AFK APG L++DL L + G++LLITG SS GK+SLLR +RGLW + +G++ +T V+F+PQK ++T+G+L++Q+ +PL +L +T ++ +++ + + + + R G LD +WNW+DVLSPGE+QRL+FIRL +H P++AFLDE+TSAL + ME+ LY + IT VSVGHR +L +H+K+L + G Sbjct: 13 HGFNVSFFRRFWRLQHLLFPGIFSLPLGLFALLLLVALLDEFIIYGVGLIPSGFYQVLGEKDFPGFINQTLKSVGIILAVAVNKAVKTYISQILNLTWRQLLTRAVHRLYFTGINYYQLNVLDK-FVDNPDQRITADINILCLVFSSVAIKVVVSPFTISYYSYKAYVGTGWVGPTSCFLFFIVGTVVNKLLMSPIVAWVVKNERREGDFRYKHMQIRSNAESLAFLTGARLEESKTNNKLDVLLKTQHSLYGRQFFLNLAVNMFDYLGSIISYLALAVPIFSGRYDDISPAELSSLISQNAFVCIYLISTFSTLVDLSSSVTQLAGVTHRVSELIELSISTTKNTTGMFDEVNTEDDGYFMEGVAFK-------APGRTDELVKDLCLHLKPGESLLITGSSSAGKTSLLRLLRGLWRLSRGNLTAHYTPGPCGVLFLPQKPYLTDGTLREQITFPLSVDLELITNDETEELLNYLQKMKLDGLMSRIG-GLDRPVEWNWYDVLSPGEMQRLSFIRLLYHRPAMAFLDEATSALDMEMEQLLYSAAVDKGITLVSVGHRASLRAFHKKVLHLKG 578
BLAST of abc subfamily abcd vs. nr
Match: gi|585654777|ref|XP_006884745.1| (PREDICTED: ATP-binding cassette sub-family D member 4 [Elephantulus edwardii]) HSP 1 Score: 453.366 bits (1165), Expect = 2.443e-143 Identity = 239/592 (40.37%), Postives = 365/592 (61.66%), Query Frame = 0 Query: 53 PRSGTKVETYNGFNWTFIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLE-IFDTS-SSDESKEHGTTAIDLPR-PG-------LAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNI---SVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 P + K + F+QR ++ + LFP+W+S +++ + LL V +E+ I Y VGLI S YY++LG+KD F T +++ +I+L S + + + ++ V+ R+ LT + +LY + + +Y +NVL R +DN DQRI+ D+ FC + + L+I+PF + YY Y GW+GP +F +F++ T+VNK LM PI+ +QEK EGDFR+KH +R+++E AF VE +T +L L + QR L + + +L + F Y+GSI SY+VIAIPIFGG Y L T+LS L+S+N+FVC+ LI F++L++++ +S + G THRIGEL E + D S S++S+ + DL + PG +AF L V+++AP D+ LI+DL L I GQ+LLI G + GK+SLLR + GLW QGS+ + V+F+PQK F T+G+L++QV+YPL + I+ + + ++ R G LD DWNW+DVLSPGE+QRL+F RLF+ P A LDE+TSAL+ +E +LY C +L +TC+SVGHR++L ++H +LR+ G Sbjct: 4 PAAAPKAGARPRLDLQFLQRFLQIQKVLFPTWSSQNVLMFLTLLCVALLEQLIIYQVGLIPSQYYRVLGNKDLGEFKSLTILAVVLIVLNSTLKSFDQFTCNLLYVSWRKDLTEHLHRLYFRGRVYYTLNVL-RDDIDNPDQRISQDVERFCRQLSTMAGQLVISPFTLVYYTYQCFQSTGWLGPVSIFGYFILGTVVNKILMGPIVTKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGHVEHVRTDRRLQRLLQTQRELMSKELWLYIGINTFDYLGSILSYVVIAIPIFGGVYGDLSPTELSTLVSKNAFVCIYLISCFTRLIDLSTTLSDVAGYTHRIGELQETLLDMSLKSEDSESLDNSEWDLDKAPGRPADTTDVAFALERVSISAPSSDKPLIKDLGLRICEGQSLLIVGNTGTGKTSLLRVLGGLWTSTQGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKEIYPDSGSTDDERIMRFLEVAGLSNLVTRTG-GLDQQVDWNWYDVLSPGEMQRLSFTRLFYLQPKYAVLDEATSALTEEVESELYRICQQLGMTCISVGHRRSLEKFHSWVLRLYG 593
BLAST of abc subfamily abcd vs. nr
Match: gi|507630930|ref|XP_004699087.1| (PREDICTED: ATP-binding cassette sub-family D member 4 [Echinops telfairi]) HSP 1 Score: 453.366 bits (1165), Expect = 2.986e-143 Identity = 240/576 (41.67%), Postives = 351/576 (60.94%), Query Frame = 0 Query: 69 FIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIF--------DTSSSDESKEHGTTAIDLPR--PGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNI---SVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 F+QR ++ + LFPSW+S ++ + LL V +E+ + Y VGL+ S YYQ+LG KD D F TF+++ +I+L S + + ++ ++ V+ R+ LT + +LY Q + +Y +NVL R +DN DQRI+ D+ FC + + LII+PF + YY Y GW+GP +F +F++ T VN+ LM PI+ +QEK EGDFR+KH +R+++E AF VE +T +L L + QR L + +L + F Y+GSI SY+VIAIPIF GFY L T+LSAL+S+N+FVC+ LI FS+L++++ +S + G THRIGEL E D+ DESK A P AF L V++ P D+ LI+DL L I GQ+LLITG + GK+SLLR + GLW QGS+ + V+F+PQK F T+G+L++QV+YPL + I+ + + + R G LD DWNW+DVLSPGE+QRL+F RLF+ P A LDE+TSAL+ +E +LY C +L +TC+SVGHR +L ++H +L++ G Sbjct: 22 FLQRFLQIQKVLFPSWSSQNALMFLTLLCVALLEQLVIYQVGLVPSQYYQVLGTKDADGFQSLTFLAVVLIVLNSTLKSFDQFICNLLYVSWRKDLTEYLHRLYFQGRVYYTLNVL-RDDIDNPDQRISQDVERFCRQLSTMAGQLIISPFTLGYYTYQCFQSTGWLGPVSIFGYFLLGTTVNRTLMGPIVAKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGHVEHMRTDRRLQRLLQTQRELMAKELWLYIGINTFDYLGSILSYVVIAIPIFSGFYGDLSPTELSALVSKNAFVCIYLISCFSRLIDLSTTLSDVAGYTHRIGELQETLLDMSLKSQDSEDLDESKWDSDRAPGWPAEPADTAFILERVSICVPSSDKPLIKDLGLKISDGQSLLITGNTGTGKTSLLRTLGGLWASTQGSVQMLADFGPHGVLFLPQKPFFTDGTLREQVIYPLKEIYPDSGSTDDERILRFLELAGLPSLVTRTG-GLDEQVDWNWYDVLSPGEMQRLSFARLFYLQPRFAVLDEATSALTEEVESELYRTCQQLGMTCISVGHRHSLEKFHSWVLKLHG 595
BLAST of abc subfamily abcd vs. nr
Match: gi|586470153|ref|XP_006865671.1| (PREDICTED: ATP-binding cassette sub-family D member 4 [Chrysochloris asiatica]) HSP 1 Score: 451.825 bits (1161), Expect = 8.533e-143 Identity = 235/576 (40.80%), Postives = 355/576 (61.63%), Query Frame = 0 Query: 69 FIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIF--------DTSSSDESKEHGTTAIDLPR--PGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNI---SVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 F+QR ++ + LFPSW+S +++ + LL V +E+ + Y VGLI S +YQ+LG KD + F + TF+++ +I+L + + + + ++ V+ R+ LT + +LY + + +Y +NVL R +DN DQRI+ D+ FC + + LII+PF + YY Y GW+GP +F +F++ T+VNK LM PI+ +QEK EGDFR+KH +R+++E AF VE +T +L L + QR L + + +L + F Y+GSI SY+VIAIPIF G Y L T+LS L+S+N+FVC+ LI F++L++++ ++ + G THRIGEL E D+ DESK A P AF L V+++AP D+ LI+DL L I GQNLLITG + GK+SLLR + GLW +GS+ + V+F+PQK F T+G+L++QV+YPL + I+ + + + R G LD DWNW+DVLSPGE+QRL+F RLF+ P A LDE+TSAL+ +E +LY C +L +TC+SVGHR++L ++H +L++ G Sbjct: 20 FLQRFLQIQKVLFPSWSSENVLMFLTLLCVALLEQLVIYQVGLIPSQFYQVLGSKDLNGFKRLTFLAVVLIVLNATLKSFDQFTCNLLYVSWRKGLTEHLHRLYFRGRVYYTLNVL-RDDIDNPDQRISQDVERFCRQLSSMARQLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFILGTMVNKLLMGPIVAKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGHVEHMRTDRRLQRLLQTQRELMSRELWLYIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCIYLISCFTRLIDLSTTLTDVAGYTHRIGELQETLLDMSLKSQDSEDLDESKWDMDMAPGWPAELADTAFALERVSISAPSSDKPLIKDLGLKISEGQNLLITGNTGTGKTSLLRVLGGLWESTRGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKEIYPDSGSADDERIVRFLELAGLSSLVTRTG-GLDQQVDWNWYDVLSPGEMQRLSFTRLFYLQPKFAVLDEATSALTEEVESELYRICHQLGMTCISVGHRRSLEKFHSWVLKLCG 593
BLAST of abc subfamily abcd vs. nr
Match: gi|471361219|ref|XP_004371175.1| (ATP-binding cassette sub-family D member 4 [Trichechus manatus latirostris]) HSP 1 Score: 450.669 bits (1158), Expect = 2.462e-142 Identity = 237/576 (41.15%), Postives = 360/576 (62.50%), Query Frame = 0 Query: 69 FIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIF--------DTSSSDESKEHGTTAIDLP-RPG-LAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNI---SVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 F+QR ++ + LFPSW+S ++ + LL V +E+ + Y VGLI S YY++LG+KD D F TF+++ +I+L S++ + ++ ++ V+ R+ LT + LY + + +Y +NVL R VDN DQRI+ D+ FC + + S LI++PF + YY Y GW+GP +F +F++ T+VNK LM PI+ +QEK EGDFR+KH +R+++E AF VE +T +L L + QR L + + +L++ F Y+GSI SY+VIAIPIF G Y L T+LS L+S+N+FVC+ LI F++L++++ +S + G THRIGEL E D+ + DES+ A + P P AF L V+++AP D+ LI+DL L I GQ+LLITG + GK+SLLR + GLW +GS+ + V+F+PQK F T+G+L++QV+YPL + I+ + + + R G LD DWNW+D+LSPGE+QRL+F RLF+ P A LDE+TSAL+ +E +LY C +L +TC+SVGHR++L ++H +L++ G Sbjct: 20 FLQRFLQIQKVLFPSWSSQNALMFLTLLCVVLLEQLVIYQVGLIPSQYYRVLGNKDLDGFKSLTFLAVMLIVLNSMLKSFDQFICNLLYVSWRKNLTEHLHHLYFRGRVYYTLNVL-RDDVDNPDQRISQDVERFCRQLSSMASQLIVSPFTLIYYTYQCFQSTGWLGPVSIFGYFILGTMVNKILMGPIVAKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGHVEHMRTDRRLQRLLQTQRELMSKELWLSIGINTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCLYLISCFTRLIDLSTTLSDVAGYTHRIGELQETLLDMSLTSQDSENLDESEWDLDKAPEWPAEPADTAFFLERVSISAPSSDKPLIKDLGLKISEGQSLLITGNTGTGKTSLLRVLGGLWASTRGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKEIYPDSGSTDDDRIMRFLELAGLSSLVIRTG-GLDQQVDWNWYDILSPGEMQRLSFTRLFYLQPKYAVLDEATSALTEEVESELYRICQQLGMTCISVGHRRSLEKFHSWVLKLYG 593
BLAST of abc subfamily abcd vs. nr
Match: gi|632975432|ref|XP_007904226.1| (PREDICTED: ATP-binding cassette sub-family D member 4 [Callorhinchus milii]) HSP 1 Score: 449.899 bits (1156), Expect = 5.109e-142 Identity = 239/579 (41.28%), Postives = 356/579 (61.49%), Query Frame = 0 Query: 69 FIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIFDTSSSDESKEHGTTAIDL------------PRPGLAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSI----WTNPNISVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 F+QR ++ L+PSW S ++++ LL V +E+ + Y VG+I S +Y++LG+KD +F T I++ +I+L SV+ + ++ ++ V R+ LT + + Y Q K +Y +NVL R +DN DQRI+ D+ FC + V S II+PF + YY Y GW+GP +F++FVI + VNK L+ PI+ EQEK EGDFR+KH +R+ +E AF +VE +T ++L EL R QR L + +L+L F Y+GSI SY+VIA+PIF G YD L +L AL+S+N+FV + LI FS+L++++ +VS + G THRIGEL E S + KE + DL G A+ L V+ T+P D+ L+Q+L L I G +LLITG + GK+SLLR + GLW +GS+ P+ ++F+PQK F T+G+L++QV+YPL E+ + + II + + + +R G LD +WNWFD LSPGE+QRL+F RL++H P A LDE+TSAL+ +E +LY C +L +T VSVGHR +L +YH +L++SG Sbjct: 23 FLQRFGRIQAILYPSWLSQSVLMYATLLAVALLEQLVVYQVGIIPSHFYEVLGNKDLTSFRNLTLIAITLIVLNSVLKSFDQFISSLMYVHWRQSLTTYLHRNYFQRKVYYVLNVL-REDLDNPDQRISQDVERFCQALSTVASKCIISPFTLGYYTYQCFHSTGWMGPVSIFIYFVIGSTVNKILIGPIVATLVEQEKLEGDFRFKHMQIRVGAESAAFYRAGSVEQVRTGKRLQELLRTQRLLMQRELWLHLGVNTFDYLGSILSYVVIAVPIFSGVYDGLHPAELIALVSKNAFVSIYLISCFSQLIDLSTSVSDLAGYTHRIGELQEACLEISKSQGKEGLCVSEDLWEFEDSLDLGEGQSSGKAWILERVSFTSPSSDQLLVQNLTLQITEGNSLLITGNTGTGKTSLLRILNGLWEAAEGSVRRLTCFGPH-GILFIPQKPFFTDGTLREQVIYPLK-EIYPASDSADERIIRFLELTGLMSLLKRTG-GLDKQMEWNWFDALSPGEMQRLSFARLYYHQPKYAVLDEATSALTEQVEGELYRACKQLGMTVVSVGHRSSLEKYHDSLLKLSG 597
BLAST of abc subfamily abcd vs. nr
Match: gi|731466146|ref|XP_010587045.1| (ATP-binding cassette sub-family D member 4 isoform X1 [Loxodonta africana]) HSP 1 Score: 448.743 bits (1153), Expect = 1.800e-141 Identity = 238/576 (41.32%), Postives = 358/576 (62.15%), Query Frame = 0 Query: 69 FIQRLAKLHRFLFPSWASATLILIVILLIVRGVEEYIGYHVGLISSAYYQILGDKDFDAFVKQTFISLGMILLISVVITLRIWLLEMIVVAARRQLTGAVQKLYLQNKNFYWVNVLGRGYVDNSDQRITADIGTFCMTYAYVMSDLIIAPFIIAYYAYDAITRAGWVGPTGMFLFFVIATIVNKFLMSPIMNMTSEQEKKEGDFRYKHATLRLHSELLAFQSDTTVEMRKTKEKLFELCRVQRRLYNMQTFLNLFKTCFSYIGSIASYLVIAIPIFGGFYDYLDGTDLSALISENSFVCMNLIYQFSKLVNMTPAVSAMGGATHRIGELLEIF--------DTSSSDESKEHGTTAIDLP-RPG-LAFKLSHVTVTAPGLDRSLIQDLDLDIVLGQNLLITGPSSCGKSSLLRAIRGLWNVPQGSIWTNPNI---SVMFMPQKTFVTNGSLKDQVLYPLDAELVALTIEQESTIIDMFKYLDMFHIFERCGHSLDYDPDWNWFDVLSPGELQRLAFIRLFHHSPSVAFLDESTSALSLAMERKLYEKCSELAITCVSVGHRKTLNEYHQKILRISG 631 F+QR ++ + LFPSW+S + ++ + LL + VE+ + Y VGLI S YY++LG+KD D F TF+++ +I+L S + + + ++ V+ R+ LT + +LY + + +Y +NVL R VDN DQRI+ D+ FC + + S LII+PF + YY Y GW+GP +F +F++ T+VNK LM PI+ +QEK EGDFR+KH +R+++E AF VE +T +L L + QR L + + +L++ F Y+GSI SY+VIAIPIF G Y L T+LS L+S+N+FVC+ LI F++L++++ +S + G THRIGEL E D+ + DES+ + A P P AF L V+++AP D+ LI+DL L I Q+LLITG + GK+SLLR + GLW +GS+ + V+F+PQK F T+G+L++QV+YPL + I+ + + + R G LD DWNW+DVLSPGE+QRL+F RLF+ P A LDE+TSAL+ +E +LY C +L +T VSVGHR++L ++H +L++ G Sbjct: 24 FLQRFLQIQKVLFPSWSSQSALMFLTLLCMVLVEQLVIYQVGLIPSQYYRVLGNKDLDGFKSLTFLAVMLIVLNSTLKSFDQFTCNLLYVSWRKDLTEYLHRLYFRGRVYYTLNVL-RDDVDNPDQRISQDVERFCRQLSSMASQLIISPFTLVYYTYQCFQSTGWLGPVSIFGYFILGTVVNKILMGPIVAKLVQQEKLEGDFRFKHMQIRVNAEPAAFYRAGHVEHMRTDRRLQRLLQTQRELMSKELWLSIGVNTFDYLGSILSYVVIAIPIFSGVYGDLSPTELSTLVSKNAFVCIYLISCFTRLIDLSTTLSDVAGYTHRIGELQETLLDMSLTSQDSENLDESEWNLDKAPGWPAEPADTAFVLERVSISAPSSDKPLIKDLGLKISESQSLLITGNTGTGKTSLLRVLGGLWASTRGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKEIYPDSGSTDDERIMRFLELAGLSSLVTRTG-GLDQQVDWNWYDVLSPGEMQRLSFTRLFYLQPKYAVLDEATSALTEEVESELYRICQQLGMTYVSVGHRRSLEKFHSWVLKLYG 597 The following BLAST results are available for this feature:
BLAST of abc subfamily abcd vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 7
BLAST of abc subfamily abcd vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc subfamily abcd vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold87_size395581:172854..209896+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>maker-scaffold87_size395581-snap-gene-2.14 ID=maker-scaffold87_size395581-snap-gene-2.14|Name=abc subfamily abcd|organism=Tigriopus kingsejongensis|type=gene|length=37043bp|location=Sequence derived from alignment at scaffold87_size395581:172854..209896+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc subfamily abcd' has the following synonyms
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