zinc transporter zip1-like, maker-scaffold9_size846264-snap-gene-0.9 (gene) Tigriopus kingsejongensis

Overview
Namezinc transporter zip1-like
Unique Namemaker-scaffold9_size846264-snap-gene-0.9
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of zinc transporter zip1-like vs. L. salmonis genes
Match: EMLSAG00000005333 (supercontig:LSalAtl2s:LSalAtl2s286:45599:179721:1 gene:EMLSAG00000005333 transcript:EMLSAT00000005333 description:"maker-LSalAtl2s286-augustus-gene-1.20")

HSP 1 Score: 72.7886 bits (177), Expect = 1.051e-16
Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRS------IISCLLCFGGGVLIATSVIHMLPEVRETFALS---GIDLDEK-PVAEILTCVGFFLVYFIEEL 101
            MDQ+L+AKI+S+++LGG + + GL+ + L   + +     +       II+ ++CFG GVL+ T + HM PE  E    +   GI  D   P+ EILT  GF L+YF+EE+
Sbjct:    1 MDQILIAKIVSVIILGGFAIIFGLIPLGLNSYIKKIKNDDKKKNAFELIITIIVCFGAGVLLTTCLTHMXPEANEHMNEAVGKGIMTDTGFPLIEILTLAGFLLIYFVEEI 111          

HSP 2 Score: 63.1586 bits (152), Expect = 2.564e-13
Identity = 41/111 (36.94%), Postives = 62/111 (55.86%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRSI------ISCLLCFGGGVLIATSVIHMLPEVRE--TFAL-SGIDLDEK-PVAEILTCVGFFLVYFIEEL 101
            MDQ L+AKI+S+++LG  + + GL+ + L     +     +        I+ + CFG GV++ T + HM PE  E  T A+  GI  D   P+ EIL   GF L+YF+EE+
Sbjct:  335 MDQTLIAKIVSVIILGVFALIFGLIPLRLKSYFEKMKNDNKKKNIFELFITVIGCFGAGVILTTCLTHMXPEANEYMTEAVGKGIMTDTGFPLVEILALAGFLLIYFVEEI 445          
BLAST of zinc transporter zip1-like vs. SwissProt
Match: gi|81883439|sp|Q5U1X7.1|S39A3_RAT (RecName: Full=Zinc transporter ZIP3; AltName: Full=Solute carrier family 39 member 3; AltName: Full=Zrt- and Irt-like protein 3; Short=ZIP-3)

HSP 1 Score: 55.0694 bits (131), Expect = 4.118e-9
Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISF--LLG-LLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRET----FALSGIDLDEKPVAEILTCVGFFLVYFIEELTL 103
            M Q+LVAK++ MV   G+ F  LLG LL + + +   E +   + ++S    FGGGV +AT    +LP VR+      +L  I  D  P+AE L  VGFFL  F+E+L L
Sbjct:    1 MSQLLVAKVLCMV---GVFFFMLLGSLLPVKVIEADFEKAHRSKKVLSLCNTFGGGVFLATCFNALLPAVRDKLQQVLSLGHISTD-YPLAETLMMVGFFLTVFVEQLVL 106          
BLAST of zinc transporter zip1-like vs. SwissProt
Match: gi|81880080|sp|Q99K24.1|S39A3_MOUSE (RecName: Full=Zinc transporter ZIP3; AltName: Full=Solute carrier family 39 member 3; AltName: Full=Zrt- and Irt-like protein 3; Short=ZIP-3)

HSP 1 Score: 53.1434 bits (126), Expect = 2.165e-8
Identity = 43/110 (39.09%), Postives = 62/110 (56.36%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISF--LLG-LLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRET----FALSGIDLDEKPVAEILTCVGFFLVYFIEELTL 103
            M ++LVAK++ MV   G+ F  LLG LL + + +   E +   + ++S    FGGGV +AT    +LP VR+      +L  I  D  P+AE L  VGFFL  F+E+L L
Sbjct:    1 MTKLLVAKVLCMV---GVFFFMLLGSLLPVKVIEADLEKAHRSKKVLSLCNTFGGGVFLATCFNALLPAVRDKLQQVLSLGHISTD-YPLAETLMMVGFFLTVFVEQLVL 106          
BLAST of zinc transporter zip1-like vs. SwissProt
Match: gi|75057781|sp|Q5E960.1|S39A3_BOVIN (RecName: Full=Zinc transporter ZIP3; AltName: Full=Solute carrier family 39 member 3; AltName: Full=Zrt- and Irt-like protein 3; Short=ZIP-3)

HSP 1 Score: 50.8322 bits (120), Expect = 1.442e-7
Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRET----FALSGIDLDEKPVAEILTCVGFFLVYFIEELTL 103
            M ++LVAKI+ MV +     L  LL + + +   E +   + I+S    FGGGV +AT    +LP VRE       L+ I  D  P+AE +  +GFF+  F+E+L L
Sbjct:    1 MVKLLVAKILCMVGMFFFMLLGSLLPVKIIEMDFEKAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLKEVLTLAHISTD-YPLAETIMLLGFFMTVFLEQLVL 106          
BLAST of zinc transporter zip1-like vs. SwissProt
Match: gi|74732942|sp|Q9BRY0.2|S39A3_HUMAN (RecName: Full=Zinc transporter ZIP3; AltName: Full=Solute carrier family 39 member 3; AltName: Full=Zrt- and Irt-like protein 3; Short=ZIP-3)

HSP 1 Score: 50.8322 bits (120), Expect = 1.574e-7
Identity = 43/110 (39.09%), Postives = 62/110 (56.36%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISF--LLG-LLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRET----FALSGIDLDEKPVAEILTCVGFFLVYFIEELTL 103
            M ++LVAKI+ MV   G+ F  LLG LL + + +   E +   + I+S    FGGGV +AT    +LP VRE      +L  I  D  P+AE +  +GFF+  F+E+L L
Sbjct:    1 MVKLLVAKILCMV---GVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTD-YPLAETILLLGFFMTVFLEQLIL 106          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|1022758745|gb|KZS05208.1| (putative Zinc/iron regulated transporter-related protein [Daphnia magna])

HSP 1 Score: 83.5741 bits (205), Expect = 1.195e-16
Identity = 48/110 (43.64%), Postives = 69/110 (62.73%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQ------RSIISCLLCFGGGVLIATSVIHMLPEVRETFA---LSGIDLDEKPVAEILTCVGFFLVYFIEEL 101
            MD V +AK+ISM++L   + +LGLL + + +R+   S         R+++S +LCFGGGVL+AT++ H+LPE+ E  A     G      P+AEI+   GFFLVY IEEL
Sbjct:    1 MDPVDLAKVISMIVLSLGTLILGLLPIWIIRRMKAKSGSHEMSPGIRNVLSGMLCFGGGVLMATALTHLLPELHEGIAELQADGTIKSSLPIAEIIFSAGFFLVYLIEEL 110          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|1285006257|ref|XP_023015014.1| (zinc transporter ZIP1-like [Leptinotarsa decemlineata])

HSP 1 Score: 83.5741 bits (205), Expect = 1.261e-16
Identity = 51/108 (47.22%), Postives = 71/108 (65.74%), Query Frame = 0
Query:    2 DQVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETS--RVQRSIISCLLCFGGGVLIATSVIHMLPEVRETF-ALSGIDLDEK-----PVAEILTCVGFFLVYFIEEL 101
            + +LVAK+++M +LG  SFLLG+L + L + +S  S    +  +IS LLCFGGGVL+ T+ IH+ PEVRE F AL    L        P++EI+ C+GFF VY +EEL
Sbjct:   16 NDLLVAKVVAMTVLGATSFLLGMLPIKLTKMISIKSVDGDKNLLISLLLCFGGGVLLFTTFIHLQPEVREGFEALKRQHLVADMPGGIPLSEIVFCLGFFFVYLVEEL 123          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|512902712|ref|XP_004925441.1| (zinc transporter ZIP3 [Bombyx mori])

HSP 1 Score: 82.4185 bits (202), Expect = 1.712e-16
Identity = 44/104 (42.31%), Postives = 65/104 (62.50%), Query Frame = 0
Query:    3 QVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRSII-SCLLCFGGGVLIATSVIHMLPEVRETFALSGIDLDEKPVAEILTCVGFFLVYFIEELTLFC 105
             V  AK++SM+ LG  SF  G+L        SE++R +  ++ SCLLCFGGGVL+ATS++HMLPE RE +            +E++ C+GFF+VY ++E+   C
Sbjct:    2 NVTTAKVVSMLALGLGSFFGGMLPSCF----SESARQRHPLVLSCLLCFGGGVLLATSLVHMLPEAREKY---------PNYSELMVCIGFFIVYLVDEIFHLC 92          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|1133418953|ref|XP_019865011.1| (PREDICTED: zinc transporter ZIP1-like [Aethina tumida])

HSP 1 Score: 82.8037 bits (203), Expect = 2.457e-16
Identity = 47/110 (42.73%), Postives = 71/110 (64.55%), Query Frame = 0
Query:    2 DQVLVAKIISMVLLGGISFLLGLLAMVLYQRLS--ETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRETF----ALSGIDLDEKPVAEILTCVGFFLVYFIEELTLFC 105
            D ++VAK++SM +LG +SF++GLL + L + +S    +  +  ++S LLCFGGGVL+ T+ IH+ PEVR  F    A   +     P++E++ C+GFF VYFIEE    C
Sbjct:   17 DDLIVAKVVSMCVLGVVSFIIGLLPIKLTKLISIKSVNGDKNLLVSLLLCFGGGVLLFTTFIHLQPEVRTAFQHLEAEHAVPDIGVPMSELVFCIGFFFVYFIEEAVHCC 126          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|913328379|ref|XP_013195697.1| (PREDICTED: zinc transporter ZIP3 [Amyelois transitella])

HSP 1 Score: 80.4925 bits (197), Expect = 9.024e-16
Identity = 48/100 (48.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query:    3 QVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRSI-ISCLLCFGGGVLIATSVIHMLPEVRETFALSGIDLDEKPVAEILTCVGFFLVYFIEEL 101
            +V  AK I+M+ LG  SF+ G+L        SET+R +  + ISCLLCFG GVL+ATS+ HMLPE RE         D    +E+L CVGFFLVY ++E+
Sbjct:    2 EVSTAKAIAMLTLGLGSFVTGMLPACF----SETTRQRHPLFISCLLCFGAGVLLATSLTHMLPEARE---------DLPDYSELLLCVGFFLVYIVDEI 88          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|1229698804|ref|XP_022129744.1| (zinc transporter ZIP3 [Pieris rapae])

HSP 1 Score: 80.1073 bits (196), Expect = 1.179e-15
Identity = 46/102 (45.10%), Postives = 62/102 (60.78%), Query Frame = 0
Query:    3 QVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRETFALSGIDLDEKPVAEILTCVGFFLVYFIEELTLF 104
            +V  AK+ISMV LG  SF  G+  + + +R  +   +    ISCLLCFGGGVL++TS+ H+LPE RE              +E+  CVGFFLVYF++EL  F
Sbjct:    2 EVSTAKVISMVALGLGSFAAGVAPVCISERARQRHPL---FISCLLCFGGGVLLSTSLTHILPEAREILG---------KYSELGLCVGFFLVYFVDELVHF 91          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|1130264698|ref|XP_019770792.1| (PREDICTED: zinc transporter ZIP1-like [Dendroctonus ponderosae] >gi|1130264702|ref|XP_019770793.1| PREDICTED: zinc transporter ZIP1-like [Dendroctonus ponderosae] >gi|1130264705|ref|XP_019770794.1| PREDICTED: zinc transporter ZIP1-like [Dendroctonus ponderosae] >gi|478250452|gb|ENN70947.1| hypothetical protein YQE_12348, partial [Dendroctonus ponderosae] >gi|546677325|gb|ERL88182.1| hypothetical protein D910_05570 [Dendroctonus ponderosae])

HSP 1 Score: 80.4925 bits (197), Expect = 1.517e-15
Identity = 47/107 (43.93%), Postives = 70/107 (65.42%), Query Frame = 0
Query:    2 DQVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETS--RVQRSIISCLLCFGGGVLIATSVIHMLPEVRE---TFALSGI--DLDEKPVAEILTCVGFFLVYFIEEL 101
            D  L+AK+++M+ LG  SF++GLL + L + +S T+    +  ++S +LCFGGGVL+ T+ +H+ PEVRE   T    G   D+   P +E++ C GFFLVY IEEL
Sbjct:   15 DNALIAKVVAMIALGMSSFIIGLLPVKLAKMVSLTNLDGEKNLLLSLMLCFGGGVLLFTTFLHLQPEVREFFNTLEAHGKMPDMRGIPPSELVFCFGFFLVYLIEEL 121          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|1209698227|gb|OWR50068.1| (hypothetical protein KGM_215411 [Danaus plexippus plexippus])

HSP 1 Score: 79.7221 bits (195), Expect = 1.802e-15
Identity = 46/105 (43.81%), Postives = 67/105 (63.81%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRSI-ISCLLCFGGGVLIATSVIHMLPEVRETFALSGIDLDEKPVAEILTCVGFFLVYFIEELTLF 104
            MD V  AK I+M+ LG  SF+ G+L   +    S++SR +  + ISCLLCFGGGVL++TS++HMLPE RE +            +E++ C GFF+VY ++E+  F
Sbjct:    1 MD-VSTAKAIAMLSLGLGSFIAGMLPACI----SQSSRQKHPLLISCLLCFGGGVLLSTSLVHMLPEAREKY---------PQYSELVLCAGFFMVYLVDEIVHF 91          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|291228456|ref|XP_002734196.1| (PREDICTED: zinc transporter ZIP1-like [Saccoglossus kowalevskii])

HSP 1 Score: 79.337 bits (194), Expect = 2.624e-15
Identity = 52/114 (45.61%), Postives = 67/114 (58.77%), Query Frame = 0
Query:    1 MDQVLVAKIISM------VLLGGISFLLGLLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRETF--ALSGIDLDEK-PVAEILTCVGFFLVYFIEELTLFC 105
            MD V+ AK I++      VL+ G   L+ + A+    R S T R    IIS L CF GGV +ATS+IHMLPEVRET   AL G+D+    P+AE LT +GFF++   E   L C
Sbjct:    1 MDDVMGAKTIALFGLLAEVLIFGFIPLVCVNAVRTQDRFSTTKR----IISWLSCFAGGVFLATSLIHMLPEVRETLAGALEGLDVHTHFPLAEFLTGIGFFIILITEHFALMC 110          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|1325335283|ref|XP_023349468.1| (protein zntD-like [Eurytemora affinis])

HSP 1 Score: 80.1073 bits (196), Expect = 2.680e-15
Identity = 47/103 (45.63%), Postives = 64/103 (62.14%), Query Frame = 0
Query:    3 QVLVAKIISMVLLGGISFLLGLLAM----VLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRETFALSGIDLDEKPVAEILTCVGFFLVYFIEEL 101
             +L  K++SM LLGGIS L+GLL      +L  R  +  R Q  + S LLCFGGGVL+AT+++H+LPE +E   L         + E+  C+GFFLVY +EEL
Sbjct:    2 DLLGTKLLSMFLLGGISLLIGLLVWKASGLLGFRKQKNGRRQLILTSLLLCFGGGVLLATALLHILPEAQEGLELEAEKTGIHWLGELCLCLGFFLVYMVEEL 104          
The following BLAST results are available for this feature:
BLAST of zinc transporter zip1-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000053331.051e-1638.74supercontig:LSalAtl2s:LSalAtl2s286:45599:179721:1 ... [more]
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BLAST of zinc transporter zip1-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
gi|81883439|sp|Q5U1X7.1|S39A3_RAT4.118e-940.00RecName: Full=Zinc transporter ZIP3; AltName: Full... [more]
gi|81880080|sp|Q99K24.1|S39A3_MOUSE2.165e-839.09RecName: Full=Zinc transporter ZIP3; AltName: Full... [more]
gi|75057781|sp|Q5E960.1|S39A3_BOVIN1.442e-736.45RecName: Full=Zinc transporter ZIP3; AltName: Full... [more]
gi|74732942|sp|Q9BRY0.2|S39A3_HUMAN1.574e-739.09RecName: Full=Zinc transporter ZIP3; AltName: Full... [more]
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BLAST of zinc transporter zip1-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1022758745|gb|KZS05208.1|1.195e-1643.64putative Zinc/iron regulated transporter-related p... [more]
gi|1285006257|ref|XP_023015014.1|1.261e-1647.22zinc transporter ZIP1-like [Leptinotarsa decemline... [more]
gi|512902712|ref|XP_004925441.1|1.712e-1642.31zinc transporter ZIP3 [Bombyx mori][more]
gi|1133418953|ref|XP_019865011.1|2.457e-1642.73PREDICTED: zinc transporter ZIP1-like [Aethina tum... [more]
gi|913328379|ref|XP_013195697.1|9.024e-1648.00PREDICTED: zinc transporter ZIP3 [Amyelois transit... [more]
gi|1229698804|ref|XP_022129744.1|1.179e-1545.10zinc transporter ZIP3 [Pieris rapae][more]
gi|1130264698|ref|XP_019770792.1|1.517e-1543.93PREDICTED: zinc transporter ZIP1-like [Dendroctonu... [more]
gi|1209698227|gb|OWR50068.1|1.802e-1543.81hypothetical protein KGM_215411 [Danaus plexippus ... [more]
gi|291228456|ref|XP_002734196.1|2.624e-1545.61PREDICTED: zinc transporter ZIP1-like [Saccoglossu... [more]
gi|1325335283|ref|XP_023349468.1|2.680e-1545.63protein zntD-like [Eurytemora affinis][more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold9_size846264supercontigscaffold9_size846264:904..1371 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold9_size846264-snap-gene-0.9-mRNA-1maker-scaffold9_size846264-snap-gene-0.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold9_size846264:904..1371+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold9_size846264-snap-gene-0.9 ID=maker-scaffold9_size846264-snap-gene-0.9|Name=zinc transporter zip1-like|organism=Tigriopus kingsejongensis|type=gene|length=468bp|location=Sequence derived from alignment at scaffold9_size846264:904..1371+ (Tigriopus kingsejongensis)
CAGCACAGCTCTTTGAGTAAGTCCAGAATTCTTGACATTTTTGTGGGCCA TATACTGTATGCACCTAATCTGTACTAACCTTTCACACTTCAGATAATGG ATCAAGTTCTGGTAGCCAAGATCATCTCCATGGTCCTTCTGGGAGGAATC TCCTTCCTCCTGGGACTGCTGGCCATGGTTTTGTACCAAAGACTATCCGA GACGAGCCGAGTCCAAAGATCCATCATTTCTTGCCTCCTCTGCTTCGGTG GTGGTGTCCTCATTGCCACCAGTGTCATTCACATGCTTCCTGAGGTAGGG AAATCTGGCATTTCTATCAAGGGACGCCGAAACCATCGCTCTTTTCAGGT TAGAGAGACATTCGCTCTGTCCGGGATTGATCTGGATGAAAAACCTGTGG CCGAGATTCTGACTTGTGTCGGGTTCTTCTTGGTCTACTTCATTGAAGAG CTGACGCTGTTCTGCTTC
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Synonyms
The feature 'zinc transporter zip1-like' has the following synonyms
Synonym
Tk08377
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