zinc transporter zip1-like, maker-scaffold9_size846264-snap-gene-0.9 (gene) Tigriopus kingsejongensis

Overview
Namezinc transporter zip1-like
Unique Namemaker-scaffold9_size846264-snap-gene-0.9
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of zinc transporter zip1-like vs. L. salmonis genes
Match: EMLSAG00000005333 (supercontig:LSalAtl2s:LSalAtl2s286:45599:179721:1 gene:EMLSAG00000005333 transcript:EMLSAT00000005333 description:"maker-LSalAtl2s286-augustus-gene-1.20")

HSP 1 Score: 72.7886 bits (177), Expect = 1.051e-16
Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRS------IISCLLCFGGGVLIATSVIHMLPEVRETFALS---GIDLDEK-PVAEILTCVGFFLVYFIEEL 101
            MDQ+L+AKI+S+++LGG + + GL+ + L   + +     +       II+ ++CFG GVL+ T + HM PE  E    +   GI  D   P+ EILT  GF L+YF+EE+
Sbjct:    1 MDQILIAKIVSVIILGGFAIIFGLIPLGLNSYIKKIKNDDKKKNAFELIITIIVCFGAGVLLTTCLTHMXPEANEHMNEAVGKGIMTDTGFPLIEILTLAGFLLIYFVEEI 111          

HSP 2 Score: 63.1586 bits (152), Expect = 2.564e-13
Identity = 41/111 (36.94%), Postives = 62/111 (55.86%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRSI------ISCLLCFGGGVLIATSVIHMLPEVRE--TFAL-SGIDLDEK-PVAEILTCVGFFLVYFIEEL 101
            MDQ L+AKI+S+++LG  + + GL+ + L     +     +        I+ + CFG GV++ T + HM PE  E  T A+  GI  D   P+ EIL   GF L+YF+EE+
Sbjct:  335 MDQTLIAKIVSVIILGVFALIFGLIPLRLKSYFEKMKNDNKKKNIFELFITVIGCFGAGVILTTCLTHMXPEANEYMTEAVGKGIMTDTGFPLVEILALAGFLLIYFVEEI 445          
BLAST of zinc transporter zip1-like vs. SwissProt
Match: gi|81883439|sp|Q5U1X7.1|S39A3_RAT (RecName: Full=Zinc transporter ZIP3; AltName: Full=Solute carrier family 39 member 3; AltName: Full=Zrt- and Irt-like protein 3; Short=ZIP-3)

HSP 1 Score: 55.0694 bits (131), Expect = 4.118e-9
Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISF--LLG-LLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRET----FALSGIDLDEKPVAEILTCVGFFLVYFIEELTL 103
            M Q+LVAK++ MV   G+ F  LLG LL + + +   E +   + ++S    FGGGV +AT    +LP VR+      +L  I  D  P+AE L  VGFFL  F+E+L L
Sbjct:    1 MSQLLVAKVLCMV---GVFFFMLLGSLLPVKVIEADFEKAHRSKKVLSLCNTFGGGVFLATCFNALLPAVRDKLQQVLSLGHISTD-YPLAETLMMVGFFLTVFVEQLVL 106          
BLAST of zinc transporter zip1-like vs. SwissProt
Match: gi|81880080|sp|Q99K24.1|S39A3_MOUSE (RecName: Full=Zinc transporter ZIP3; AltName: Full=Solute carrier family 39 member 3; AltName: Full=Zrt- and Irt-like protein 3; Short=ZIP-3)

HSP 1 Score: 53.1434 bits (126), Expect = 2.165e-8
Identity = 43/110 (39.09%), Postives = 62/110 (56.36%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISF--LLG-LLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRET----FALSGIDLDEKPVAEILTCVGFFLVYFIEELTL 103
            M ++LVAK++ MV   G+ F  LLG LL + + +   E +   + ++S    FGGGV +AT    +LP VR+      +L  I  D  P+AE L  VGFFL  F+E+L L
Sbjct:    1 MTKLLVAKVLCMV---GVFFFMLLGSLLPVKVIEADLEKAHRSKKVLSLCNTFGGGVFLATCFNALLPAVRDKLQQVLSLGHISTD-YPLAETLMMVGFFLTVFVEQLVL 106          
BLAST of zinc transporter zip1-like vs. SwissProt
Match: gi|75057781|sp|Q5E960.1|S39A3_BOVIN (RecName: Full=Zinc transporter ZIP3; AltName: Full=Solute carrier family 39 member 3; AltName: Full=Zrt- and Irt-like protein 3; Short=ZIP-3)

HSP 1 Score: 50.8322 bits (120), Expect = 1.442e-7
Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRET----FALSGIDLDEKPVAEILTCVGFFLVYFIEELTL 103
            M ++LVAKI+ MV +     L  LL + + +   E +   + I+S    FGGGV +AT    +LP VRE       L+ I  D  P+AE +  +GFF+  F+E+L L
Sbjct:    1 MVKLLVAKILCMVGMFFFMLLGSLLPVKIIEMDFEKAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLKEVLTLAHISTD-YPLAETIMLLGFFMTVFLEQLVL 106          
BLAST of zinc transporter zip1-like vs. SwissProt
Match: gi|74732942|sp|Q9BRY0.2|S39A3_HUMAN (RecName: Full=Zinc transporter ZIP3; AltName: Full=Solute carrier family 39 member 3; AltName: Full=Zrt- and Irt-like protein 3; Short=ZIP-3)

HSP 1 Score: 50.8322 bits (120), Expect = 1.574e-7
Identity = 43/110 (39.09%), Postives = 62/110 (56.36%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISF--LLG-LLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRET----FALSGIDLDEKPVAEILTCVGFFLVYFIEELTL 103
            M ++LVAKI+ MV   G+ F  LLG LL + + +   E +   + I+S    FGGGV +AT    +LP VRE      +L  I  D  P+AE +  +GFF+  F+E+L L
Sbjct:    1 MVKLLVAKILCMV---GVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTD-YPLAETILLLGFFMTVFLEQLIL 106          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|568250264|gb|ETN59985.1| (hypothetical protein AND_008406 [Anopheles darlingi])

HSP 1 Score: 80.1073 bits (196), Expect = 2.865e-15
Identity = 43/99 (43.43%), Postives = 63/99 (63.64%), Query Frame = 0
Query:    7 AKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRETFALSGIDLDEKPVAEILTCVGFFLVYFIEELTLFC 105
            AK++++V LG  SF+ G+L +   QR  E  R  R ++S LLCFG GVL+AT+++HMLPE+R            +  AEI+ C GFFL+Y I+E+ + C
Sbjct:   22 AKLLAIVALGAGSFVCGVLPLCCSQRNRE--RYPR-LLSFLLCFGAGVLLATAIVHMLPEIRSAL---------QQYAEIVFCGGFFLMYTIDEVMVLC 108          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|1344794482|ref|XP_023939418.1| (zinc transporter ZIP3 isoform X1 [Bicyclus anynana])

HSP 1 Score: 78.5666 bits (192), Expect = 3.292e-15
Identity = 45/103 (43.69%), Postives = 65/103 (63.11%), Query Frame = 0
Query:    3 QVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRSI-ISCLLCFGGGVLIATSVIHMLPEVRETFALSGIDLDEKPVAEILTCVGFFLVYFIEELTLF 104
            +V  AK++S+V+LG  SF+ G+    +    S+++R +  + ISCLLCFGGGVL++TS+ HMLPE RE               E+L CVGFFLVY ++E+  F
Sbjct:    2 EVSTAKVVSIVVLGLGSFISGMAPACI----SQSARQRHPLLISCLLCFGGGVLLSTSLTHMLPEAREKL---------PEYTELLLCVGFFLVYVVDEIVHF 91          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|914555971|gb|KOB65500.1| (Zinc/iron transporter [Operophtera brumata])

HSP 1 Score: 76.6406 bits (187), Expect = 4.322e-15
Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 0
Query:    3 QVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRS--IISCLLCFGGGVLIATSVIHMLPEVRETFALSGIDLDEKPVAEILTCVGFFLVYFIEEL 101
            +V  AK+ISM+ LG  SF  G+L        S  +R QR   ++SCLLCFGGGVL++TS++HMLPE RE        L E    E+L CVGFF+VY ++E+
Sbjct:    2 EVRTAKLISMLALGLGSFFAGMLPATF----SAAAR-QRCPLLVSCLLCFGGGVLLSTSLVHMLPEARE-------KLPEN--TELLFCVGFFIVYLVDEI 88          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|1344794484|ref|XP_023939419.1| (zinc transporter ZIP3 isoform X2 [Bicyclus anynana])

HSP 1 Score: 78.5666 bits (192), Expect = 4.830e-15
Identity = 47/104 (45.19%), Postives = 63/104 (60.58%), Query Frame = 0
Query:    3 QVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRS--IISCLLCFGGGVLIATSVIHMLPEVRETFALSGIDLDEKPVAEILTCVGFFLVYFIEELTLF 104
            +V  AK++S+V+LG  SF+ G+    + Q     S  QR   +ISCLLCFGGGVL++TS+ HMLPE RE               E+L CVGFFLVY ++E+  F
Sbjct:    2 EVSTAKVVSIVVLGLGSFISGMAPACISQ-----SARQRHPLLISCLLCFGGGVLLSTSLTHMLPEAREKL---------PEYTELLLCVGFFLVYVVDEIVHF 91          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|668457873|gb|KFB45855.1| (AGAP002624-PA-like protein [Anopheles sinensis])

HSP 1 Score: 78.1814 bits (191), Expect = 7.934e-15
Identity = 46/99 (46.46%), Postives = 65/99 (65.66%), Query Frame = 0
Query:    7 AKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRETFALSGIDLDEKPVAEILTCVGFFLVYFIEELTLFC 105
            AK++++V+LG  SFL G+L +   QR     +    ++S LLCFG GVL+ATS++HMLPE+R         L+E   AEI+ C GFFL+Y ++EL LFC
Sbjct:   26 AKLLAIVVLGVGSFLCGVLPLYCSQR---NRQRHPGMLSFLLCFGAGVLLATSIVHMLPEIRAA-------LNE--YAEIVFCTGFFLMYAMDELMLFC 112          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|1330908067|gb|PNF30604.1| (Zinc transporter ZIP1 [Cryptotermes secundus])

HSP 1 Score: 78.1814 bits (191), Expect = 1.202e-14
Identity = 46/114 (40.35%), Postives = 70/114 (61.40%), Query Frame = 0
Query:    2 DQVLVAKIISMVLLGGISFLLGLLAMVL-----YQRLSE----TSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRETF----ALSGIDLDEKPVAEILTCVGFFLVYFIEELT 102
            + ++ AK++SM++L   +F+LG++   L     + R ++    TSR  R I+S L+CFGGG L++T  +HMLPEVRE      A S I      + E+L C GFF++Y +EELT
Sbjct:   16 EGIVTAKVVSMIVLSVATFILGMIPTALSAWFGWNRKTDGSLDTSRTSRLILSLLICFGGGALLSTMFLHMLPEVREFISELQAESEIAETSVSLPELLMCCGFFIMYLLEELT 129          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|1059410315|ref|XP_017778077.1| (PREDICTED: zinc transporter ZIP1 isoform X2 [Nicrophorus vespilloides] >gi|1059410317|ref|XP_017778078.1| PREDICTED: zinc transporter ZIP1 isoform X2 [Nicrophorus vespilloides])

HSP 1 Score: 77.7962 bits (190), Expect = 1.227e-14
Identity = 45/109 (41.28%), Postives = 70/109 (64.22%), Query Frame = 0
Query:    2 DQVLVAKIISMVLLGGISFLLGLLAMVLYQRLS-ETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRETFALSGIDLDEK--------PVAEILTCVGFFLVYFIEEL 101
              +L+AK+++M  LG  SFL+G+  M L + L+ + +      IS LLCFGGGVL+ T+ +H+ PEVRE+FA   ++ +E+         V+E++ C+GFF VY +EEL
Sbjct:    8 SDLLMAKLVAMTTLGLASFLIGISPMRLTKLLNIKATDGNNLAISLLLCFGGGVLLFTTFVHLQPEVRESFA--KLEAEERIPVIGHGISVSEVIFCLGFFFVYLVEEL 114          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|1339044879|ref|XP_023710544.1| (zinc transporter ZIP1-like [Cryptotermes secundus])

HSP 1 Score: 77.7962 bits (190), Expect = 1.336e-14
Identity = 46/114 (40.35%), Postives = 70/114 (61.40%), Query Frame = 0
Query:    2 DQVLVAKIISMVLLGGISFLLGLLAMVL-----YQRLSE----TSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRETF----ALSGIDLDEKPVAEILTCVGFFLVYFIEELT 102
            + ++ AK++SM++L   +F+LG++   L     + R ++    TSR  R I+S L+CFGGG L++T  +HMLPEVRE      A S I      + E+L C GFF++Y +EELT
Sbjct:   16 EGIVTAKVVSMIVLSVATFILGMIPTALSAWFGWNRKTDGSLDTSRTSRLILSLLICFGGGALLSTMFLHMLPEVREFISELQAESEIAETSVSLPELLMCCGFFIMYLLEELT 129          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|321469613|gb|EFX80593.1| (hypothetical protein DAPPUDRAFT_32841, partial [Daphnia pulex])

HSP 1 Score: 77.0258 bits (188), Expect = 1.481e-14
Identity = 46/110 (41.82%), Postives = 69/110 (62.73%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISFLLGLLAMVLYQRLS------ETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRE---TFALSGIDLDEKPVAEILTCVGFFLVYFIEEL 101
            MD V +AK+ISMV+L   + +LGL  + + +R+       E SR  ++++S +LCFG GVL+AT++ H+LPE+ E       +G      P+AEI+   GFFLVY +EEL
Sbjct:    1 MDSVDLAKVISMVVLFVGTLVLGLFPIWIVRRMKVNSGNKEMSRGIKNVLSGMLCFGAGVLMATALTHLLPELHEGIKELQTNGTIKSTLPMAEIIFSAGFFLVYLLEEL 110          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|762144394|ref|XP_011455464.1| (PREDICTED: zinc transporter ZIP1 isoform X2 [Crassostrea gigas])

HSP 1 Score: 75.8702 bits (185), Expect = 3.901e-14
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISFLLGLLAMVLYQRLSET-SRVQRSI---ISCLLCFGGGVLIATSVIHMLPEVR---ETFALSGIDLDEKPVAEILTCVGFFLVYFIEE 100
            MD V+VAKIIS+++   IS LLGL    LYQ  +E  +R+Q+++   IS + CF GG+ + T  +H++PE R   E          + PVAE+LT VGFF V F+E 
Sbjct:    8 MD-VVVAKIISLIISTVISVLLGLFPCKLYQHFAENIARIQKAVDYSISSMKCFSGGIFLGTCFLHLIPETRKKIEAVMTQSRSYSQYPVAELLTVVGFFGVLFMEH 113          
The following BLAST results are available for this feature:
BLAST of zinc transporter zip1-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000053331.051e-1638.74supercontig:LSalAtl2s:LSalAtl2s286:45599:179721:1 ... [more]
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BLAST of zinc transporter zip1-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
gi|81883439|sp|Q5U1X7.1|S39A3_RAT4.118e-940.00RecName: Full=Zinc transporter ZIP3; AltName: Full... [more]
gi|81880080|sp|Q99K24.1|S39A3_MOUSE2.165e-839.09RecName: Full=Zinc transporter ZIP3; AltName: Full... [more]
gi|75057781|sp|Q5E960.1|S39A3_BOVIN1.442e-736.45RecName: Full=Zinc transporter ZIP3; AltName: Full... [more]
gi|74732942|sp|Q9BRY0.2|S39A3_HUMAN1.574e-739.09RecName: Full=Zinc transporter ZIP3; AltName: Full... [more]
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BLAST of zinc transporter zip1-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|568250264|gb|ETN59985.1|2.865e-1543.43hypothetical protein AND_008406 [Anopheles darling... [more]
gi|1344794482|ref|XP_023939418.1|3.292e-1543.69zinc transporter ZIP3 isoform X1 [Bicyclus anynana... [more]
gi|914555971|gb|KOB65500.1|4.322e-1547.52Zinc/iron transporter [Operophtera brumata][more]
gi|1344794484|ref|XP_023939419.1|4.830e-1545.19zinc transporter ZIP3 isoform X2 [Bicyclus anynana... [more]
gi|668457873|gb|KFB45855.1|7.934e-1546.46AGAP002624-PA-like protein [Anopheles sinensis][more]
gi|1330908067|gb|PNF30604.1|1.202e-1440.35Zinc transporter ZIP1 [Cryptotermes secundus][more]
gi|1059410315|ref|XP_017778077.1|1.227e-1441.28PREDICTED: zinc transporter ZIP1 isoform X2 [Nicro... [more]
gi|1339044879|ref|XP_023710544.1|1.336e-1440.35zinc transporter ZIP1-like [Cryptotermes secundus][more]
gi|321469613|gb|EFX80593.1|1.481e-1441.82hypothetical protein DAPPUDRAFT_32841, partial [Da... [more]
gi|762144394|ref|XP_011455464.1|3.901e-1442.99PREDICTED: zinc transporter ZIP1 isoform X2 [Crass... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold9_size846264supercontigscaffold9_size846264:904..1371 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold9_size846264-snap-gene-0.9-mRNA-1maker-scaffold9_size846264-snap-gene-0.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold9_size846264:904..1371+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold9_size846264-snap-gene-0.9 ID=maker-scaffold9_size846264-snap-gene-0.9|Name=zinc transporter zip1-like|organism=Tigriopus kingsejongensis|type=gene|length=468bp|location=Sequence derived from alignment at scaffold9_size846264:904..1371+ (Tigriopus kingsejongensis)
CAGCACAGCTCTTTGAGTAAGTCCAGAATTCTTGACATTTTTGTGGGCCA TATACTGTATGCACCTAATCTGTACTAACCTTTCACACTTCAGATAATGG ATCAAGTTCTGGTAGCCAAGATCATCTCCATGGTCCTTCTGGGAGGAATC TCCTTCCTCCTGGGACTGCTGGCCATGGTTTTGTACCAAAGACTATCCGA GACGAGCCGAGTCCAAAGATCCATCATTTCTTGCCTCCTCTGCTTCGGTG GTGGTGTCCTCATTGCCACCAGTGTCATTCACATGCTTCCTGAGGTAGGG AAATCTGGCATTTCTATCAAGGGACGCCGAAACCATCGCTCTTTTCAGGT TAGAGAGACATTCGCTCTGTCCGGGATTGATCTGGATGAAAAACCTGTGG CCGAGATTCTGACTTGTGTCGGGTTCTTCTTGGTCTACTTCATTGAAGAG CTGACGCTGTTCTGCTTC
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Synonyms
The feature 'zinc transporter zip1-like' has the following synonyms
Synonym
Tk08377
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