zinc transporter zip1-like, maker-scaffold9_size846264-snap-gene-0.9 (gene) Tigriopus kingsejongensis

Overview
Namezinc transporter zip1-like
Unique Namemaker-scaffold9_size846264-snap-gene-0.9
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of zinc transporter zip1-like vs. L. salmonis genes
Match: EMLSAG00000005333 (supercontig:LSalAtl2s:LSalAtl2s286:45599:179721:1 gene:EMLSAG00000005333 transcript:EMLSAT00000005333 description:"maker-LSalAtl2s286-augustus-gene-1.20")

HSP 1 Score: 72.7886 bits (177), Expect = 1.051e-16
Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRS------IISCLLCFGGGVLIATSVIHMLPEVRETFALS---GIDLDEK-PVAEILTCVGFFLVYFIEEL 101
            MDQ+L+AKI+S+++LGG + + GL+ + L   + +     +       II+ ++CFG GVL+ T + HM PE  E    +   GI  D   P+ EILT  GF L+YF+EE+
Sbjct:    1 MDQILIAKIVSVIILGGFAIIFGLIPLGLNSYIKKIKNDDKKKNAFELIITIIVCFGAGVLLTTCLTHMXPEANEHMNEAVGKGIMTDTGFPLIEILTLAGFLLIYFVEEI 111          

HSP 2 Score: 63.1586 bits (152), Expect = 2.564e-13
Identity = 41/111 (36.94%), Postives = 62/111 (55.86%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRSI------ISCLLCFGGGVLIATSVIHMLPEVRE--TFAL-SGIDLDEK-PVAEILTCVGFFLVYFIEEL 101
            MDQ L+AKI+S+++LG  + + GL+ + L     +     +        I+ + CFG GV++ T + HM PE  E  T A+  GI  D   P+ EIL   GF L+YF+EE+
Sbjct:  335 MDQTLIAKIVSVIILGVFALIFGLIPLRLKSYFEKMKNDNKKKNIFELFITVIGCFGAGVILTTCLTHMXPEANEYMTEAVGKGIMTDTGFPLVEILALAGFLLIYFVEEI 445          
BLAST of zinc transporter zip1-like vs. SwissProt
Match: gi|81883439|sp|Q5U1X7.1|S39A3_RAT (RecName: Full=Zinc transporter ZIP3; AltName: Full=Solute carrier family 39 member 3; AltName: Full=Zrt- and Irt-like protein 3; Short=ZIP-3)

HSP 1 Score: 55.0694 bits (131), Expect = 4.118e-9
Identity = 44/110 (40.00%), Postives = 62/110 (56.36%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISF--LLG-LLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRET----FALSGIDLDEKPVAEILTCVGFFLVYFIEELTL 103
            M Q+LVAK++ MV   G+ F  LLG LL + + +   E +   + ++S    FGGGV +AT    +LP VR+      +L  I  D  P+AE L  VGFFL  F+E+L L
Sbjct:    1 MSQLLVAKVLCMV---GVFFFMLLGSLLPVKVIEADFEKAHRSKKVLSLCNTFGGGVFLATCFNALLPAVRDKLQQVLSLGHISTD-YPLAETLMMVGFFLTVFVEQLVL 106          
BLAST of zinc transporter zip1-like vs. SwissProt
Match: gi|81880080|sp|Q99K24.1|S39A3_MOUSE (RecName: Full=Zinc transporter ZIP3; AltName: Full=Solute carrier family 39 member 3; AltName: Full=Zrt- and Irt-like protein 3; Short=ZIP-3)

HSP 1 Score: 53.1434 bits (126), Expect = 2.165e-8
Identity = 43/110 (39.09%), Postives = 62/110 (56.36%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISF--LLG-LLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRET----FALSGIDLDEKPVAEILTCVGFFLVYFIEELTL 103
            M ++LVAK++ MV   G+ F  LLG LL + + +   E +   + ++S    FGGGV +AT    +LP VR+      +L  I  D  P+AE L  VGFFL  F+E+L L
Sbjct:    1 MTKLLVAKVLCMV---GVFFFMLLGSLLPVKVIEADLEKAHRSKKVLSLCNTFGGGVFLATCFNALLPAVRDKLQQVLSLGHISTD-YPLAETLMMVGFFLTVFVEQLVL 106          
BLAST of zinc transporter zip1-like vs. SwissProt
Match: gi|75057781|sp|Q5E960.1|S39A3_BOVIN (RecName: Full=Zinc transporter ZIP3; AltName: Full=Solute carrier family 39 member 3; AltName: Full=Zrt- and Irt-like protein 3; Short=ZIP-3)

HSP 1 Score: 50.8322 bits (120), Expect = 1.442e-7
Identity = 39/107 (36.45%), Postives = 58/107 (54.21%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRET----FALSGIDLDEKPVAEILTCVGFFLVYFIEELTL 103
            M ++LVAKI+ MV +     L  LL + + +   E +   + I+S    FGGGV +AT    +LP VRE       L+ I  D  P+AE +  +GFF+  F+E+L L
Sbjct:    1 MVKLLVAKILCMVGMFFFMLLGSLLPVKIIEMDFEKAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLKEVLTLAHISTD-YPLAETIMLLGFFMTVFLEQLVL 106          
BLAST of zinc transporter zip1-like vs. SwissProt
Match: gi|74732942|sp|Q9BRY0.2|S39A3_HUMAN (RecName: Full=Zinc transporter ZIP3; AltName: Full=Solute carrier family 39 member 3; AltName: Full=Zrt- and Irt-like protein 3; Short=ZIP-3)

HSP 1 Score: 50.8322 bits (120), Expect = 1.574e-7
Identity = 43/110 (39.09%), Postives = 62/110 (56.36%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISF--LLG-LLAMVLYQRLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRET----FALSGIDLDEKPVAEILTCVGFFLVYFIEELTL 103
            M ++LVAKI+ MV   G+ F  LLG LL + + +   E +   + I+S    FGGGV +AT    +LP VRE      +L  I  D  P+AE +  +GFF+  F+E+L L
Sbjct:    1 MVKLLVAKILCMV---GVFFFMLLGSLLPVKIIETDFEKAHRSKKILSLCNTFGGGVFLATCFNALLPAVREKLQKVLSLGHISTD-YPLAETILLLGFFMTVFLEQLIL 106          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|1314988275|ref|XP_023176126.1| (zinc transporter ZIP1 [Drosophila hydei])

HSP 1 Score: 76.2554 bits (186), Expect = 5.957e-14
Identity = 46/105 (43.81%), Postives = 67/105 (63.81%), Query Frame = 0
Query:    4 VLVAKIISMVLLGGISFLLGLLAMVL--YQRLSETSRVQRS--IISCLLCFGGGVLIATSVIHMLPEVRETF-ALSGIDLDEK---PVAEILTCVGFFLVYFIEE 100
            +L AK+ +MV+L   S L G +  +L  Y R +E     RS  ++ CLL FGGGVL+AT+ +H+LPEV+E    L   ++  +   P+AE+L C GFFL+YF+EE
Sbjct:   64 LLTAKVTAMVVLCCASALCGSIPFLLNRYYRWTENQTNARSATVVKCLLYFGGGVLLATTFLHLLPEVQEVVEQLQTCEIIGELTFPLAELLMCCGFFLMYFVEE 168          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|762144390|ref|XP_011455461.1| (PREDICTED: zinc transporter ZIP1 isoform X1 [Crassostrea gigas] >gi|762144392|ref|XP_011455463.1| PREDICTED: zinc transporter ZIP1 isoform X1 [Crassostrea gigas] >gi|405974880|gb|EKC39492.1| Zinc transporter ZIP3 [Crassostrea gigas])

HSP 1 Score: 75.485 bits (184), Expect = 7.406e-14
Identity = 46/107 (42.99%), Postives = 65/107 (60.75%), Query Frame = 0
Query:    1 MDQVLVAKIISMVLLGGISFLLGLLAMVLYQRLSET-SRVQRSI---ISCLLCFGGGVLIATSVIHMLPEVR---ETFALSGIDLDEKPVAEILTCVGFFLVYFIEE 100
            MD V+VAKIIS+++   IS LLGL    LYQ  +E  +R+Q+++   IS + CF GG+ + T  +H++PE R   E          + PVAE+LT VGFF V F+E 
Sbjct:    8 MD-VVVAKIISLIISTVISVLLGLFPCKLYQHFAENIARIQKAVDYSISSMKCFSGGIFLGTCFLHLIPETRKKIEAVMTQSRSYSQYPVAELLTVVGFFGVLFMEH 113          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|91078996|ref|XP_974675.1| (PREDICTED: zinc transporter ZIP1 [Tribolium castaneum] >gi|270003679|gb|EFA00127.1| Zinc transporter ZIP1-like Protein [Tribolium castaneum])

HSP 1 Score: 75.485 bits (184), Expect = 8.394e-14
Identity = 45/110 (40.91%), Postives = 69/110 (62.73%), Query Frame = 0
Query:    2 DQVLVAKIISMVLLGGISFLLGLLAMVLYQ--RLSETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRETFALSGIDLDEK--------PVAEILTCVGFFLVYFIEEL 101
            + +++AK ++M +LG  SFL+G+L + L +   +      +  +IS LLCFGGGVL+ T+ IH+ PEVRE+F    ++   K        P++E++ CVGFF VY IEEL
Sbjct:   14 NDLILAKAVAMCVLGLASFLIGILPVKLTKLINIKAVDGDKNLLISLLLCFGGGVLLFTTFIHLQPEVRESFMR--LESHNKIPSIGSGVPMSELVFCVGFFFVYLIEEL 121          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|909553213|ref|XP_013148028.1| (PREDICTED: zinc transporter ZIP2 [Papilio polytes])

HSP 1 Score: 73.1738 bits (178), Expect = 8.395e-14
Identity = 41/100 (41.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query:    3 QVLVAKIISMVLLGGISFLLGLLAMVLYQRLSETSRVQRSI-ISCLLCFGGGVLIATSVIHMLPEVRETFALSGIDLDEKPVAEILTCVGFFLVYFIEEL 101
            +V  AK +SMV LG  SF+ G+  +      +E +R +  + IS LLCFG GVL++TS++HMLPE RE              +E++ C+GFF+VYF++E+
Sbjct:    2 EVSTAKALSMVALGVGSFITGMTPVCF----TEGARQRHPLLISTLLCFGAGVLLSTSLVHMLPEAREKL---------PKYSELMLCIGFFIVYFVDEM 88          
BLAST of zinc transporter zip1-like vs. nr
Match: gi|1330908058|gb|PNF30595.1| (hypothetical protein B7P43_G06135 [Cryptotermes secundus])

HSP 1 Score: 75.485 bits (184), Expect = 9.864e-14
Identity = 51/119 (42.86%), Postives = 70/119 (58.82%), Query Frame = 0
Query:    2 DQVLVAKIISMVLLGGISFLLGLLAMVLYQRL--------SETSRVQRSIISCLLCFGGGVLIATSVIHMLPEVRETFALSGI----DLDEKP-------VAEILTCVGFFLVYFIEEL 101
             ++LVAKI++M++LG  SF LG+L + L + L        +  S  Q  +IS LLCFGGGVL+ T+ +H+ PEVRE     GI    +  E P        AE++ CVGFF VY +EEL
Sbjct:   74 SELLVAKIVAMIVLGFCSFCLGILPVKLAKWLKWNKEPTSTAKSSPQPFVISLLLCFGGGVLLYTTFMHLQPEVRE-----GIQELQNTGELPEFRHGLHFAELIFCVGFFFVYLVEEL 187          
The following BLAST results are available for this feature:
BLAST of zinc transporter zip1-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000053331.051e-1638.74supercontig:LSalAtl2s:LSalAtl2s286:45599:179721:1 ... [more]
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BLAST of zinc transporter zip1-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
gi|81883439|sp|Q5U1X7.1|S39A3_RAT4.118e-940.00RecName: Full=Zinc transporter ZIP3; AltName: Full... [more]
gi|81880080|sp|Q99K24.1|S39A3_MOUSE2.165e-839.09RecName: Full=Zinc transporter ZIP3; AltName: Full... [more]
gi|75057781|sp|Q5E960.1|S39A3_BOVIN1.442e-736.45RecName: Full=Zinc transporter ZIP3; AltName: Full... [more]
gi|74732942|sp|Q9BRY0.2|S39A3_HUMAN1.574e-739.09RecName: Full=Zinc transporter ZIP3; AltName: Full... [more]
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BLAST of zinc transporter zip1-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1314988275|ref|XP_023176126.1|5.957e-1443.81zinc transporter ZIP1 [Drosophila hydei][more]
gi|762144390|ref|XP_011455461.1|7.406e-1442.99PREDICTED: zinc transporter ZIP1 isoform X1 [Crass... [more]
gi|91078996|ref|XP_974675.1|8.394e-1440.91PREDICTED: zinc transporter ZIP1 [Tribolium castan... [more]
gi|909553213|ref|XP_013148028.1|8.395e-1441.00PREDICTED: zinc transporter ZIP2 [Papilio polytes][more]
gi|1330908058|gb|PNF30595.1|9.864e-1442.86hypothetical protein B7P43_G06135 [Cryptotermes se... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold9_size846264supercontigscaffold9_size846264:904..1371 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
maker-scaffold9_size846264-snap-gene-0.9-mRNA-1maker-scaffold9_size846264-snap-gene-0.9-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold9_size846264:904..1371+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>maker-scaffold9_size846264-snap-gene-0.9 ID=maker-scaffold9_size846264-snap-gene-0.9|Name=zinc transporter zip1-like|organism=Tigriopus kingsejongensis|type=gene|length=468bp|location=Sequence derived from alignment at scaffold9_size846264:904..1371+ (Tigriopus kingsejongensis)
CAGCACAGCTCTTTGAGTAAGTCCAGAATTCTTGACATTTTTGTGGGCCA TATACTGTATGCACCTAATCTGTACTAACCTTTCACACTTCAGATAATGG ATCAAGTTCTGGTAGCCAAGATCATCTCCATGGTCCTTCTGGGAGGAATC TCCTTCCTCCTGGGACTGCTGGCCATGGTTTTGTACCAAAGACTATCCGA GACGAGCCGAGTCCAAAGATCCATCATTTCTTGCCTCCTCTGCTTCGGTG GTGGTGTCCTCATTGCCACCAGTGTCATTCACATGCTTCCTGAGGTAGGG AAATCTGGCATTTCTATCAAGGGACGCCGAAACCATCGCTCTTTTCAGGT TAGAGAGACATTCGCTCTGTCCGGGATTGATCTGGATGAAAAACCTGTGG CCGAGATTCTGACTTGTGTCGGGTTCTTCTTGGTCTACTTCATTGAAGAG CTGACGCTGTTCTGCTTC
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Synonyms
The feature 'zinc transporter zip1-like' has the following synonyms
Synonym
Tk08377
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