nadh dehydrogenase, snap_masked-scaffold109_size355148-processed-gene-2.18 (gene) Tigriopus kingsejongensis

Overview
Namenadh dehydrogenase
Unique Namesnap_masked-scaffold109_size355148-processed-gene-2.18
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
[Close]
BLAST of nadh dehydrogenase vs. L. salmonis genes
Match: EMLSAG00000000908 (supercontig:LSalAtl2s:LSalAtl2s1159:72278:72876:-1 gene:EMLSAG00000000908 transcript:EMLSAT00000000908 description:"augustus_masked-LSalAtl2s1159-processed-gene-0.1")

HSP 1 Score: 134.035 bits (336), Expect = 4.660e-40
Identity = 65/153 (42.48%), Postives = 89/153 (58.17%), Query Frame = 0 
Query:   58 PDSVVSGMMHGLLGVFTGPAKALRETLKPLRGGEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYE--RSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWERRHGPV 208
            PDS +   +  L  V TGP     + +       YPWY R+Y+RVP I+ CYTDD VC  EAN QF+RD  VE +I++++  R E C + E      +  D  + C  + +++  A  N YIKYGD+     A  ALMKQKHRM+WERR+GP+
Sbjct:    2 PDSYLDHFLDSLSQVVTGPVVWFHDKVATPYRKNYPWYXRQYRRVPGIENCYTDDWVCREEANAQFRRDKLVEKYIVQLLASRFETCTIEEGFEGKKAKTDPNAKCHDLWKNWCNANLNFYIKYGDMKHNFKAEEALMKQKHRMIWERRNGPI 154
[Close]
BLAST of nadh dehydrogenase vs. SwissProt
Match: gi|121958854|sp|Q1HPL8.1|NDUBA_BOMMO (RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10)

HSP 1 Score: 150.214 bits (378), Expect = 4.394e-45
Identity = 72/159 (45.28%), Postives = 100/159 (62.89%), Query Frame = 0 
Query:   57 NP--DSVVSGMMHGLLGVFTGPAKALRETLKPLRGGEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWERRHGPVGSGMK 213
            NP  D+V     + L      P    RET+      +YPWYH+ Y+RVPTID+CY DD+VC +EAN QFKRD  V+  IL I+++R EDC++YE+ D++     + C ++   ++ AE+  +IKYGDLG    A  A MKQKHRM+WERR+GP+    K
Sbjct:    6 NPPDDNVFRAFCNALYNTVDAPVTWFRETVVEPNQKKYPWYHQNYRRVPTIDQCYDDDVVCDFEANAQFKRDRAVDSEILSILRQRYEDCMMYEQPDHA-----TKCRSLWDKYKSAEEAWFIKYGDLGAYGDARKAYMKQKHRMVWERRNGPLSDLTK 159
[Close]
BLAST of nadh dehydrogenase vs. SwissProt
Match: gi|32363403|sp|Q9DCS9.3|NDUBA_MOUSE (RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10; AltName: Full=Complex I-PDSW; Short=CI-PDSW; AltName: Full=NADH-ubiquinone oxidoreductase PDSW subunit)

HSP 1 Score: 81.2629 bits (199), Expect = 3.762e-18
Identity = 45/113 (39.82%), Postives = 65/113 (57.52%), Query Frame = 0 
Query:   94 WYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWERRHG 206
            +YHR+Y+RVP I EC   D++C+YEA  Q++RD KV+  I+ I+++RL+ C   E  +Y     +  C      F +  K +  +Y DLG   SA   L KQK RML ER+  
Sbjct:   63 YYHRQYRRVPDITECKEGDVLCIYEAEMQWRRDFKVDQEIMNIIQERLKACQQREGENY-----QQNCAKELEQFTKVTKAYQDRYLDLGAYYSARKCLAKQKQRMLEERKAA 170
[Close]
BLAST of nadh dehydrogenase vs. SwissProt
Match: gi|400533|sp|Q02373.2|NDUBA_BOVIN (RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10; AltName: Full=Complex I-PDSW; Short=CI-PDSW; AltName: Full=NADH-ubiquinone oxidoreductase PDSW subunit)

HSP 1 Score: 76.2554 bits (186), Expect = 2.759e-16
Identity = 48/145 (33.10%), Postives = 75/145 (51.72%), Query Frame = 0 
Query:   57 NPDSVVSGMMHGLLGVFTGPAKALRETLKPLRG-GEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRML 200
            NP + ++     L+     P   +RE ++      +Y +YHR ++RVP I EC   D++CM+EA  Q++RD KV+  I+ I+++RL+ C   E   +     +  C      F +  K +  +Y DLG   SA   L KQK RML
Sbjct:   28 NPITYLTKAFDLLVD---RPVTLVREFIERQHAKNKYYYYHREFRRVPDITECQEKDVLCMFEAEMQWRRDYKVDQEIVNIIQERLKACQQREGESH-----RQNCAKELEQFTQVVKAYQDRYHDLGAHYSARKCLAKQKQRML 164
[Close]
BLAST of nadh dehydrogenase vs. SwissProt
Match: gi|6093491|sp|O96000.3|NDUBA_HUMAN (RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10; AltName: Full=Complex I-PDSW; Short=CI-PDSW; AltName: Full=NADH-ubiquinone oxidoreductase PDSW subunit)

HSP 1 Score: 76.2554 bits (186), Expect = 3.122e-16
Identity = 56/153 (36.60%), Postives = 81/153 (52.94%), Query Frame = 0 
Query:   52 RELPYNPDSVVSGMMHGLLGVFTGPAKALRETLKPLRG-GEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWER 203
            R  P  P+ +V  MM     +   P   +RE ++       Y +YHR+Y+RVP I EC  +D++CMYEA  Q+KRD KV+  I+ I++ RL+ C   E  +Y     +  C      F +  K +  +Y DLG  +SA   L KQ+ RML ER
Sbjct:   15 RRTPVQPNPIVY-MMKAFDLIVDRPVTLVREFIERQHAKNRYYYYHRQYRRVPDITECKEEDIMCMYEAEMQWKRDYKVDQEIINIMQDRLKACQQREGQNY-----QQNCIKEVEQFTQVAKAYQDRYQDLGAYSSARKCLAKQRQRMLQER 161
[Close]
BLAST of nadh dehydrogenase vs. SwissProt
Match: gi|115502330|sp|Q0MQF3.3|NDUBA_PANTR (RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10; AltName: Full=Complex I-PDSW; Short=CI-PDSW; AltName: Full=NADH-ubiquinone oxidoreductase PDSW subunit)

HSP 1 Score: 74.7146 bits (182), Expect = 1.128e-15
Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 0 
Query:   52 RELPYNPDSVVSGMMHGLLGVFTGPAKALRETLKPLRG-GEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWER 203
            R  P  P+ +V  MM     +   P   +RE ++       Y +YHR+Y+RVP I EC  +D++CMYEA  Q++RD KV+  I+ I++ RL+ C   E  +Y     +  C      F +  K +  +Y DLG  +SA   L KQ+ RML ER
Sbjct:   15 RRTPVQPNLIVY-MMKAFDLIVDRPVTLVREFIERQHAKNRYYYYHRQYRRVPDITECKEEDIMCMYEAEMQWRRDYKVDQEIINIMQDRLKACQQREGQNY-----QQNCIKEVEQFTQVAKAYQDRYQDLGAYSSARKCLAKQRQRMLQER 161
[Close]
BLAST of nadh dehydrogenase vs. SwissProt
Match: gi|115502329|sp|Q0MQF2.3|NDUBA_GORGO (RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10; AltName: Full=Complex I-PDSW; Short=CI-PDSW; AltName: Full=NADH-ubiquinone oxidoreductase PDSW subunit >gi|269969384|sp|P0CC02.1|NDUBA_PONPY RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10; AltName: Full=Complex I-PDSW; Short=CI-PDSW; AltName: Full=NADH-ubiquinone oxidoreductase PDSW subunit)

HSP 1 Score: 70.4774 bits (171), Expect = 4.808e-14
Identity = 54/153 (35.29%), Postives = 80/153 (52.29%), Query Frame = 0 
Query:   52 RELPYNPDSVVSGMMHGLLGVFTGPAKALRETLKPLRG-GEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWER 203
            R  P  P+ +V  MM     +   P   +RE ++       Y +YHR+Y+RVP I EC  +D++C+YEA  Q++RD KV+  I+ I++ RL+ C   E  +Y     +  C      F +  K +  +Y DLG   SA   L KQ+ RML ER
Sbjct:   15 RRTPVLPNPIVY-MMKAFDLIVDRPVTLVREFIERQHAKNRYYYYHRQYRRVPDITECKEEDIMCVYEAEMQWRRDYKVDQEIINIMQDRLKACQQREGQNY-----QQNCIKEVEQFTQVAKAYQDRYQDLGAYYSARKCLAKQRQRMLQER 161
[Close]
BLAST of nadh dehydrogenase vs. SwissProt
Match: gi|269969383|sp|P0CC01.1|NDUBA_PONAB (RecName: Full=NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10; AltName: Full=Complex I-PDSW; Short=CI-PDSW; AltName: Full=NADH-ubiquinone oxidoreductase PDSW subunit)

HSP 1 Score: 68.9366 bits (167), Expect = 1.425e-13
Identity = 54/150 (36.00%), Postives = 77/150 (51.33%), Query Frame = 0 
Query:   52 RELPYNPDSVVSGMMHGLLGVFTGPAKALRETLKPLRG-GEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRML 200
            R  P  P+ +V  MM     +   P    RE ++       Y +YHR+Y+RVP I EC  +D++CMYEA  Q++RD KV+  I+ I++ RL+ C + E   Y     +  C      F +  K +  +Y DLG   SA   L KQK RML
Sbjct:   15 RRTPVLPNPIVY-MMKAFDLIVDRPVTLAREFVERQHAKNRYYYYHRQYRRVPDITECKEEDIMCMYEAEMQWRRDYKVDQEIINIMQDRLKACQVREGESY-----QQNCAKEVEQFTQVAKAYQDRYQDLGVYYSARKCLAKQKQRML 158
[Close]
BLAST of nadh dehydrogenase vs. nr
Match: gi|170037145|ref|XP_001846420.1| (NADH dehydrogenase [Culex quinquefasciatus] >gi|167880174|gb|EDS43557.1| NADH dehydrogenase [Culex quinquefasciatus])

HSP 1 Score: 168.318 bits (425), Expect = 1.182e-49
Identity = 78/153 (50.98%), Postives = 105/153 (68.63%), Query Frame = 0 
Query:   62 VSGMMHGLLGVFTGPAKALRETLKPLRGGEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWERRHGPVGSGMKE 214
            +   M+ +  V  GP    RE++       YPWYH++++RVPTID+CYTDD VC +EAN+QFKRD  V+  IL I+++R EDCVLYE+ D+     +  C  +   + +A +N +IKYGDLG   +A TA MKQKHRM+WERRHGPVGSGMK+
Sbjct:   10 LESFMNSIASVVDGPVTWFRESVVEPNRKTYPWYHQKFRRVPTIDQCYTDDAVCFFEANNQFKRDKMVDNEILNILRQRFEDCVLYEQPDH-----ERKCRPLLDQYEKAAENWFIKYGDLGGYANAKTAYMKQKHRMVWERRHGPVGSGMKQ 157
[Close]
BLAST of nadh dehydrogenase vs. nr
Match: gi|1036912099|ref|XP_017154131.1| (PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 [Drosophila miranda])

HSP 1 Score: 164.081 bits (414), Expect = 5.747e-48
Identity = 78/156 (50.00%), Postives = 102/156 (65.38%), Query Frame = 0 
Query:   58 PDSVVSGMMHGLLGVFTGPAKALRETLKPLRGGEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWERRHGPVGSGMK 213
            P S ++     +  V  GP    RET+      +Y WYH+R+QRVPTID+CYTDD VC +EA+ QF+RD  VE  I+ I+++R EDC LYE  D+ +      C  I   + +A +N +IKYGDLG   +A TA MKQKHR++WERRHGPVGSGMK
Sbjct:    4 PRSPMASFAQSVSNVIDGPITWFRETIVEPNQEKYNWYHQRFQRVPTIDQCYTDDAVCRFEADQQFRRDRMVENEIVNILRQRFEDCTLYEAPDHII-----KCKPILEQYEKATENWFIKYGDLGGYANAKTAYMKQKHRLIWERRHGPVGSGMK 154
[Close]
BLAST of nadh dehydrogenase vs. nr
Match: gi|195114488|ref|XP_002001799.1| (uncharacterized protein Dmoj_GI14985 [Drosophila mojavensis] >gi|193912374|gb|EDW11241.1| uncharacterized protein Dmoj_GI14985 [Drosophila mojavensis])

HSP 1 Score: 164.081 bits (414), Expect = 6.431e-48
Identity = 77/158 (48.73%), Postives = 105/158 (66.46%), Query Frame = 0 
Query:   58 PDSVVSGMMHGLLGVFTGPAKALRETLKPLRGGEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWERRHGPVGSGMKED 215
            P S ++  +  +     GP    RET+      +  WYH+R++RVPTIDECYTDD VC +EA+ QF+RD  V+  IL I+++R EDC LYE  D+ +      C  +   +++A +N +IKYGDLG   +A TALMKQKHR++WERRHGPVGSGMK+D
Sbjct:    4 PRSPMASFVQSVQNAIDGPITWFRETIVEPNQQKSNWYHQRFRRVPTIDECYTDDAVCRFEADQQFRRDRMVDNEILNILRQRFEDCTLYEAPDHMV-----KCKPLMDQYQQAAENWFIKYGDLGGYANAKTALMKQKHRLIWERRHGPVGSGMKDD 156
[Close]
BLAST of nadh dehydrogenase vs. nr
Match: gi|119112640|ref|XP_317733.3| (AGAP007780-PA [Anopheles gambiae str. PEST] >gi|116123450|gb|EAA12342.3| AGAP007780-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 163.31 bits (412), Expect = 1.321e-47
Identity = 74/152 (48.68%), Postives = 103/152 (67.76%), Query Frame = 0 
Query:   62 VSGMMHGLLGVFTGPAKALRETLKPLRGGEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWERRHGPVGSGMK 213
            +   ++ +     GP    RE +       YPWYH++++RVP+ID+CYTDD VC++EAN QFKRD  V+  IL I+++R EDCVLYE+ D+     +  C ++   + +A +N +IKYGDLG   +A TA MKQKHRM+WERRHGPVG+GMK
Sbjct:   10 LDSFLNAVQATIDGPVTWFREKIVEPNRQTYPWYHQKFRRVPSIDQCYTDDAVCIFEANQQFKRDKMVDNEILAILRQRFEDCVLYEQPDH-----ERKCRSLLDTYEKAAENWFIKYGDLGGYANAKTAYMKQKHRMIWERRHGPVGTGMK 156
[Close]
BLAST of nadh dehydrogenase vs. nr
Match: gi|1236489416|ref|XP_022222434.1| (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 [Drosophila obscura])

HSP 1 Score: 162.54 bits (410), Expect = 2.302e-47
Identity = 76/156 (48.72%), Postives = 102/156 (65.38%), Query Frame = 0 
Query:   58 PDSVVSGMMHGLLGVFTGPAKALRETLKPLRGGEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWERRHGPVGSGMK 213
            P S ++     +  +  GP    RET+      +Y WYH+R+QRVPTID+CYTDD VC +EA+ QF+RD  V+  I+ I+++R EDC LYE  D+ +      C  I   + +A +N +IKYGDLG   +A TA MKQKHR++WERRHGPVGSGMK
Sbjct:    4 PRSPMASFAQSVQNIIDGPITWFRETIVEPNQEKYNWYHQRFQRVPTIDQCYTDDAVCRFEADQQFRRDRMVDNEIVNILRQRFEDCTLYEAPDHMI-----KCKPILEQYEKATENWFIKYGDLGGYANAKTAYMKQKHRLIWERRHGPVGSGMK 154
[Close]
BLAST of nadh dehydrogenase vs. nr
Match: gi|1060197943|ref|XP_017856997.1| (PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 [Drosophila arizonae])

HSP 1 Score: 162.54 bits (410), Expect = 2.562e-47
Identity = 76/158 (48.10%), Postives = 104/158 (65.82%), Query Frame = 0 
Query:   58 PDSVVSGMMHGLLGVFTGPAKALRETLKPLRGGEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWERRHGPVGSGMKED 215
            P S ++  +  +     GP    RET+      +  WYH+R++RVPTIDECYTDD VC +EA+ QF+RD  V+  IL I+++R EDC LYE  D+ +      C  +   +++A +N +IKYGDLG   +A TA MKQKHR++WERRHGPVGSGMK+D
Sbjct:    4 PRSPMASFVQSVQNAIDGPITWFRETIVEPNQQKSNWYHQRFRRVPTIDECYTDDAVCRFEADQQFRRDRMVDNEILNILRQRFEDCTLYEAPDHMV-----KCKPLMDQYQQAAENWFIKYGDLGGYANAKTAFMKQKHRLIWERRHGPVGSGMKDD 156
[Close]
BLAST of nadh dehydrogenase vs. nr
Match: gi|195148074|ref|XP_002014999.1| (GL18653 [Drosophila persimilis] >gi|194106952|gb|EDW28995.1| GL18653 [Drosophila persimilis])

HSP 1 Score: 162.155 bits (409), Expect = 2.942e-47
Identity = 76/156 (48.72%), Postives = 102/156 (65.38%), Query Frame = 0 
Query:   58 PDSVVSGMMHGLLGVFTGPAKALRETLKPLRGGEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWERRHGPVGSGMK 213
            P S ++     +  +  GP    RET+      +Y WYH+R+QRVPTID+CYTDD VC +EA+ QF+RD  V+  I+ I+++R EDC LYE  D+ +      C  I   + +A +N +IKYGDLG   +A TA MKQKHR++WERRHGPVGSGMK
Sbjct:    4 PRSPMASFAQSVSNIIDGPITWFRETIVEPNQEKYNWYHQRFQRVPTIDQCYTDDAVCRFEADQQFRRDRMVDNEIVNILRQRFEDCTLYEAPDHII-----KCKPILEQYEKATENWFIKYGDLGGYANAKTAYMKQKHRLIWERRHGPVGSGMK 154
[Close]
BLAST of nadh dehydrogenase vs. nr
Match: gi|969454501|ref|XP_001356709.3| (LOW QUALITY PROTEIN: uncharacterized protein Dpse_GA21363 [Drosophila pseudoobscura pseudoobscura] >gi|950771270|gb|EAL33774.3| LOW QUALITY PROTEIN: uncharacterized protein Dpse_GA21363 [Drosophila pseudoobscura pseudoobscura])

HSP 1 Score: 162.155 bits (409), Expect = 3.122e-47
Identity = 76/156 (48.72%), Postives = 102/156 (65.38%), Query Frame = 0 
Query:   58 PDSVVSGMMHGLLGVFTGPAKALRETLKPLRGGEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWERRHGPVGSGMK 213
            P S ++     +  +  GP    RET+      +Y WYH+R+QRVPTID+CYTDD VC +EA+ QF+RD  V+  I+ I+++R EDC LYE  D+ +      C  I   + +A +N +IKYGDLG   +A TA MKQKHR++WERRHGPVGSGMK
Sbjct:    4 PRSPMASFAQSVSNIIDGPITWFRETIVEPNQEKYNWYHQRFQRVPTIDQCYTDDAVCRFEADQQFRRDRMVDNEIVNILRQRFEDCTLYEAPDHII-----KCKPILEQYEKATENWFIKYGDLGGYANAKTAYMKQKHRLIWERRHGPVGSGMK 154
[Close]
BLAST of nadh dehydrogenase vs. nr
Match: gi|1059403373|ref|XP_017774602.1| (PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 [Nicrophorus vespilloides])

HSP 1 Score: 162.155 bits (409), Expect = 3.332e-47
Identity = 74/158 (46.84%), Postives = 103/158 (65.19%), Query Frame = 0 
Query:   58 PDSVVSGMMHGLLGVFTGPAKALRETLKPLRGGEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWERRHGPVGSGMKED 215
            P ++V      + G+  GP   +RE +       YPWYH++++RVPTID+CY DD+VC  EAN Q+KRD +VE  IL I++ R EDC++YE  D++       C  + + + +A  N +IKYGDLG   +   A MKQKHRM+WERRHGPVGSGMK++
Sbjct:    6 PRNIVEQFFQTMRGMLEGPVVFVREKIVEPNQQHYPWYHQKFRRVPTIDQCYNDDIVCYTEANFQYKRDKQVENEILSILRHRFEDCMMYEAPDHA-----EKCKDVLKQYEDATTNWFIKYGDLGAYHNVKMAYMKQKHRMIWERRHGPVGSGMKQE 158
[Close]
BLAST of nadh dehydrogenase vs. nr
Match: gi|1080070183|ref|XP_018577482.1| (NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 [Anoplophora glabripennis])

HSP 1 Score: 160.999 bits (406), Expect = 8.223e-47
Identity = 75/156 (48.08%), Postives = 99/156 (63.46%), Query Frame = 0 
Query:   58 PDSVVSGMMHGLLGVFTGPAKALRETLKPLRGGEYPWYHRRYQRVPTIDECYTDDMVCMYEANHQFKRDMKVEGFILEIVKKRLEDCVLYERSDYSLYDEKSPCFTIGRDFREAEKNHYIKYGDLGFQTSAHTALMKQKHRMLWERRHGPVGSGMK 213
            P ++V      +  +   P   +RE +       YPWYH++++RVPTIDECYTDD+VC YEAN Q+KRD  V+  IL I+++R EDCV+YE  D+        C  + + + EA  N +IKYGDLG    A T  MKQKHR++WERRHGPVGSG K
Sbjct:    6 PRNIVEKFFSAVGNILEAPTIWVRENVVKPNQQSYPWYHQKFRRVPTIDECYTDDVVCQYEANFQYKRDKHVDSEILSILRERFEDCVMYEAPDHV-----EKCTPLLKIYEEAATNWFIKYGDLGAYHDAKTCYMKQKHRLIWERRHGPVGSGTK 156
The following BLAST results are available for this feature:
BLAST of nadh dehydrogenase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000009084.660e-4042.48supercontig:LSalAtl2s:LSalAtl2s1159:72278:72876:-1... [more]
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BLAST of nadh dehydrogenase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
gi|121958854|sp|Q1HPL8.1|NDUBA_BOMMO4.394e-4545.28RecName: Full=NADH dehydrogenase [ubiquinone] 1 be... [more]
gi|32363403|sp|Q9DCS9.3|NDUBA_MOUSE3.762e-1839.82RecName: Full=NADH dehydrogenase [ubiquinone] 1 be... [more]
gi|400533|sp|Q02373.2|NDUBA_BOVIN2.759e-1633.10RecName: Full=NADH dehydrogenase [ubiquinone] 1 be... [more]
gi|6093491|sp|O96000.3|NDUBA_HUMAN3.122e-1636.60RecName: Full=NADH dehydrogenase [ubiquinone] 1 be... [more]
gi|115502330|sp|Q0MQF3.3|NDUBA_PANTR1.128e-1535.95RecName: Full=NADH dehydrogenase [ubiquinone] 1 be... [more]
gi|115502329|sp|Q0MQF2.3|NDUBA_GORGO4.808e-1435.29RecName: Full=NADH dehydrogenase [ubiquinone] 1 be... [more]
gi|269969383|sp|P0CC01.1|NDUBA_PONAB1.425e-1336.00RecName: Full=NADH dehydrogenase [ubiquinone] 1 be... [more]
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BLAST of nadh dehydrogenase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|170037145|ref|XP_001846420.1|1.182e-4950.98NADH dehydrogenase [Culex quinquefasciatus] >gi|16... [more]
gi|1036912099|ref|XP_017154131.1|5.747e-4850.00PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta ... [more]
gi|195114488|ref|XP_002001799.1|6.431e-4848.73uncharacterized protein Dmoj_GI14985 [Drosophila m... [more]
gi|119112640|ref|XP_317733.3|1.321e-4748.68AGAP007780-PA [Anopheles gambiae str. PEST] >gi|11... [more]
gi|1236489416|ref|XP_022222434.1|2.302e-4748.72NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]
gi|1060197943|ref|XP_017856997.1|2.562e-4748.10PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta ... [more]
gi|195148074|ref|XP_002014999.1|2.942e-4748.72GL18653 [Drosophila persimilis] >gi|194106952|gb|E... [more]
gi|969454501|ref|XP_001356709.3|3.122e-4748.72LOW QUALITY PROTEIN: uncharacterized protein Dpse_... [more]
gi|1059403373|ref|XP_017774602.1|3.332e-4746.84PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta ... [more]
gi|1080070183|ref|XP_018577482.1|8.223e-4748.08NADH dehydrogenase [ubiquinone] 1 beta subcomplex ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold109_size355148supercontigscaffold109_size355148:281861..284450 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold109_size355148-processed-gene-2.18-mRNA-1snap_masked-scaffold109_size355148-processed-gene-2.18-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold109_size355148:281861..284450-

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold109_size355148-processed-gene-2.18 ID=snap_masked-scaffold109_size355148-processed-gene-2.18|Name=nadh dehydrogenase|organism=Tigriopus kingsejongensis|type=gene|length=2590bp|location=Sequence derived from alignment at scaffold109_size355148:281861..284450- (Tigriopus kingsejongensis)
CAACTCAACGGCAGCCCTGTCCAATCACAACAGACGAAAGACACTGGGGA
ATCAATCTCCGAGAAGTTCAGCGTCTGGCATTGTCAACGACCCCGAGATC
ATCCCAAGGTGAGTGTGCCCGCGGAGGTCGGTCGGTCGGTCCTCATGCGT
CCGCTGTCCCTTCCAGATGGGCGAAGGCGAGTTCAAGAATGGCCGTCAGG
AGGCTCAGTCGCGGGAGCTGCCTTACAATCCCGACTCGGTCGTCTCGGGG
ATGATGCACGGGCTCTTGGGTGTGTTCACGGGACCGGCCAAGGCTCTCCG
CGAGACGCTCAAACCCTTGCGAGGCGGCGAATACCCTTGGTGAGTTCGTT
CGGGAGGCGCGGAAATCGGCCGGATTGGAGGTGGAGGTCGAGGTCGATTA
GCTCCACTCGATGTGGACTCGTAGTATACTATGTCAGAAGAGGAACACAG
TAATATCCTTGTGACTTGTATTGCACTTAAAGACACAGGACGGAGCACGG
TAAAATAGCAAGTACGCAGCGTGTAGAAGCTGTCAAGATGGGGGAGAGGA
GAGGAGACGTGGCAGCGGGATTACCGGGTTATCAGGTACTGTCTCTGGGA
CATCACCAAAGATCAAGGTCGGGCTACCCAAGGGCAACGATGGAGGACTC
CCAATTGAAGTTCGATCTCTACCCATGGTGTGCAACCACATGAGCGACGG
GATTGCAGGGTTATGAGGTACTGTCTTGGGGATATCGCCACTCGAGCCGT
GGCTTCATGGGCTGGGTCGGCTCTCTGATCCCCCTATTCTCAGTCAGCCA
TCTTGCCCCGGAGCCCATTGGACCCCCGGGCTGAGTTGGGTGGCCATTAG
GAGCGCCAGAGGTGGGCGAGCCAGTCCGAGCACTGGTGGGCCCCATGCCC
CGGGTGAATGCCCCTGGGTCGCCTCAATGGGGAACCTGTGGTCGCAGCTC
GGTGCTGAGGTAACCACTCAGGATCAGTTTGTCTCGGAAACCCGAGTCGA
TCTCAATCCAGGGGTCTGGGCCAGTCAGCGGCCATGATGGCTGGCCCCAT
CCCCCCCATCCCCAGCCTAATAGTACATAAATGACGTCCCATCACGCCAA
AGTCCCTGTGGATCCCTCGAGGCTGTAATGGCTGAAAGCTGACAAAACTT
CAGCCATTGGGTCGCCCGATCCAACTCGCGCTTGGGGGCCCGACCACTCG
CCCAGTTGTCAAATTCCCGGAAAAAAATGAGCCCGACAATTTGTCTGCTC
ACCCACGCCCATTTTTCCGGCCCCATCCTCTAGCCCCCTTCGCTTTACCT
ACCTGTGGGCCGCGTGCTAGCCAACGGGTGCCCCTCTGGACCTAAAAAAA
GCTGATAGGTACTAGAGCGGCTGACCTGGGTCAGGAACCATGGTAGCAAA
CCAGTTTCTAGCCCACTTTTCGGCCCCAAATGTTAAATGAGCGTCACTGG
TTGCTATATTGTTCTTTCGAGAGGCATGCTGGTCAGCCCTCCAATTGGTC
CCATTGCCTGACACCAATTAAAAAGCCTCCACGGAAGATTTTAAAAGCTC
AAGTCGGCCGTCGAATACAATAAATCGGGCGAAATCAACGCGAAGAACCA
CCACCGAGTGCCTTCAAATGGCAGGCGCAATGGAAATGTGGCCCAATTTC
CACCCAAAGACCCGAAAATAGCCTAAAGAGCTTTTCAGATCAACGCCAAT
GGCGCTGAGCGATCTCGTGGAAAGTCAGGCGTTCTCAGCCCACCCAATTT
GAATTTTGTCGCCTCCTTATGGCTATCAAAGTTGAATTTTCCCATTTCGA
TGCCTTCAAGAAACGGAAGGCATGGCTCCCGCATATTGTCAACTTATATC
TTGTGGACGGATATTTCGATATATTTCCTGCCAGGCACGTCAGCCCCAAA
CTTGCCCAAGTCCCGTCTGTCTCCAATAACTGCTAAAGGGAACCCAATAT
TCGGTCAGGATAATGTGCCCATTCAGGAAAGGGTCCCAGTGGAAAGTCCC
ATTTCATTGAAGCCCATGTTGTGCTTTTTGCGCCCAATGTAACACGACTG
TAGATCACTGGCCATGTCCCGACGACTAATGGTGTCACTCTTAGGTATCA
TCGTCGCTATCAACGGGTGCCAACTATTGATGAATGCTACACCGACGACA
TGGTTTGCATGTATGAGGCTAACCACCAATTCAAGCGGGATATGAAGGTC
GAAGGGTTCATTCTGGAAATCGTGAAGAAACGCTTGGAAGATTGTGTGCT
ATACGAGCGTTCCGACTACTCCCTGTATGACGAAAAAAGCCCGTGTTTTA
CGATTGGGGTGAGTGGCAGGTCTACAAGTAGCGAATAGCATATGTATGGC
TTGAGCTGTTGATCGGAATCATCCCTTTCTCCGCAGAGGGATTTCCGCGA
GGCTGAGAAGAATCATTACATCAAATATGGCGACTTGGGGTTCCAGACGT
CCGCCCATACTGCTCTGATGAAGCAAAAGCACCGAATGCTTTGGGAGCGA
CGACACGGTCCAGTTGGCTCGGGAATGAAGGAGGATTGAGGATACAACCC
ACGGATAGTAGTCTCAGCGTGTAAAAAAGATATAAATCAT
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Synonyms
The feature 'nadh dehydrogenase' has the following synonyms
Synonym
Tk11041
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