pre-mrna-splicing atp-dependent rna helicase, snap_masked-scaffold10_size831480-processed-gene-0.11 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000008048 (supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1 gene:EMLSAG00000008048 transcript:EMLSAT00000008048 description:"maker-LSalAtl2s479-augustus-gene-2.18") HSP 1 Score: 1034.25 bits (2673), Expect = 0.000e+0 Identity = 521/684 (76.17%), Postives = 581/684 (84.94%), Query Frame = 0 Query: 11 KAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKERE-------AIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIFV 687 +A E +KPKFL+KE+R+AEAL++RQ +A+R + +ER KR FDR ++ D FR R G D S +E + ++E++ AIK+RYLG +K+KKRIRRLN+RKFVFDWD GEDTS DYNP+Y D+H IQFFGRGGIGG+DIKSQKK QGQFYG++ E RRTD EKDQEKERLKK+KRRE+KQKWDDRHW+EKE E M ERDWRIFREDYNI+IKGGN+ PIR+W EA L EILEII+ VGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKT AFLLPL+VWIQSLPK TR+ED D+GPYAIIMAPTRELAQQIEEE N FG LGI TVAVIGGLS+EDQGFKLR+GCEIVIATPGRLIDVLE+ YLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPD+D AE+ L EN +SKNKYRQTVMFTATMPP+VERLARTYLRRPA+VYIGSIGRPVERVEQVV +MKENDKRN+LI ILN GIEPPIIIFVNQKKGAD LA+GLEKMG+NAATLHGGKGQEQRE+ALSGLKAG+KDILVATDVAGRGIDIK+VSLVINYDMAKSIE YTHRIGRTGRAGKSGKAISF TQ+D+ LFYDLKQML+SSPVSHCPPEL+NHPE+Q+KPG+ QKKRKDEKIFV Sbjct: 94 RAAEEEASKPKFLTKEQRIAEALKRRQEEGDAIRRARDEERKKRDDFDRASFKE----------------DTFRKR--------SGRDHSLYSKRETQEEDQEKKRKDEEKVAIKDRYLGAIKKKKRIRRLNDRKFVFDWDTGEDTSNDYNPLYNDRHNIQFFGRGGIGGIDIKSQKKEQGQFYGDLAERRRTDAEKDQEKERLKKVKRREDKQKWDDRHWTEKELESMAERDWRIFREDYNIAIKGGNIPHPIRKWKEACLSPEILEIIEKVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTCAFLLPLLVWIQSLPKTTRMEDQDQGPYAIIMAPTRELAQQIEEECNTFGGPLGIXTVAVIGGLSREDQGFKLRLGCEIVIATPGRLIDVLENRYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDNDEAENEAALLENIRSKNKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSIGRPVERVEQVVYMMKENDKRNKLISILNNGIEPPIIIFVNQKKGADKLAQGLEKMGYNAATLHGGKGQEQREYALSGLKAGNKDILVATDVAGRGIDIKNVSLVINYDMAKSIEPYTHRIGRTGRAGKSGKAISFCTQEDSPLFYDLKQMLMSSPVSHCPPELANHPEAQSKPGT-VVQKKRKDEKIFV 752
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000011390 (supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1 gene:EMLSAG00000011390 transcript:EMLSAT00000011390 description:"augustus_masked-LSalAtl2s787-processed-gene-0.30") HSP 1 Score: 311.997 bits (798), Expect = 7.393e-95 Identity = 183/435 (42.07%), Postives = 256/435 (58.85%), Query Frame = 0 Query: 232 MTERDWRIFR-EDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASL-GIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRC---TYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNE-GIEPPIIIFVNQKKGADVLARGLEKMGF-NAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYD-LKQMLVSSPVSHCP 658 MT + ++R E I +KG N PI+ W A + IL+++K GY +PTPIQ QAIPI + RD+IG+A+TGSGKT AFLLPL I + P+ LE+ D GP AIIM PTREL QI +E KF ++ G R+V V GG +Q +L+ G EI++ TPGR+ID+L + ++ C TY+VLDEADRM DMGFEP V +I+D N +PD +Q VMF+AT P +E LAR L +P V +G + ++Q V +++E K +L+++L + E IIIFV++++ AD L + L + + A+LHGG Q R+ ++ K G ILVAT VA RG+D+K++ LV+NYD E Y HR GRTGRAG SG A +F+T + + +K M +S V P Sbjct: 195 MTSDEVEVYRLELEGIKVKGKNAPKPIKNWTHAGVSQRILDLLKRNGYEKPTPIQTQAIPIIMSGRDMIGIAKTGSGKTLAFLLPLFRHIMAQPE---LEEGD-GPIAIIMTPTRELCMQIGKEIKKFSKAIKGARSVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNCRRITYVVLDEADRMFDMGFEPQVSRIID-----NCRPD--------------------KQMVMFSATFPRQMEALARRILCKPVEVTVGGRSVVCKDIDQSVYVLEEEHKFLKLLELLGQRSSEGLIIIFVDKQEHADSLLKDLMSASYTSCASLHGGVDQYDRDSIITNFKNGKVKILVATSVAARGLDVKELVLVVNYDCPNHYEDYVHRCGRTGRAGNSGFAATFLTPEQGRYAGEVIKAMELSDAVVPAP 600
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000011189 (supercontig:LSalAtl2s:LSalAtl2s760:470421:474651:1 gene:EMLSAG00000011189 transcript:EMLSAT00000011189 description:"maker-LSalAtl2s760-augustus-gene-3.33") HSP 1 Score: 291.197 bits (744), Expect = 8.257e-88 Identity = 171/418 (40.91%), Postives = 245/418 (58.61%), Query Frame = 0 Query: 240 FREDYNISI-KGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIG-RPVERVEQVVCLMKENDKRNRLIKILNE-GIEP--PIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSS 652 +R++ I+I +G N+ PI + EA PD IL+ K G+ PT IQ Q PI L +++G+A TGSGKT +LLP ++ + + P LE+ D GP +++APTRELAQQI+E ++FG + I++ + GG K Q L GCEIVIATPGRLID+LE + + RCTY+VLDEADRM+DMGFEP ++KI++ + +PD RQ +M++AT P V RLA +L + IG+ + Q+V + ++ K +L ++L E G EP I+IFV K+ AD L R + + G+ A +HG K Q++R+ L K G IL ATDVA RG+D+ DV VINYD + E Y HRIGRTGR ++G A + T ++ DL +L+ + Sbjct: 96 YRDEKEITIVRGHNIPNPILDFTEAGFPDYILKEFKRQGFERPTAIQSQGWPIALSGSNMVGIAMTGSGKTCGYLLPGIIHVNNQP---YLEEGD-GPIVLVLAPTRELAQQIQEVASEFGRTSRIKSTCIFGGAPKGPQLRDLERGCEIVIATPGRLIDILEMGKINMRRCTYLVLDEADRMLDMGFEPQIRKIIEQI-----RPD--------------------RQVLMWSATWPKEVRRLAEDFLDDYVHINIGAATLHANHNILQIVDVCEDFQKEEKLARLLEEIGCEPHNKILIFVETKRKADELTRLMRRDGYPAMCIHGDKQQKERDWVLGEFKHGATTILXATDVAARGLDVDDVKFVINYDYPNNSEDYIHRIGRTGRKDRTGTAYTLFTSGNSAKAKDLVDVLLEA 484
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000005110 (supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1 gene:EMLSAG00000005110 transcript:EMLSAT00000005110 description:"maker-LSalAtl2s26-augustus-gene-8.40") HSP 1 Score: 286.574 bits (732), Expect = 1.282e-87 Identity = 167/436 (38.30%), Postives = 243/436 (55.73%), Query Frame = 0 Query: 242 EDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWI------QSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKIL--DHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKIL-----------NEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCP 658 ED + G NV I + + N+ + + IK Y++PTP+Q+ AIP RD++ A+TGSGKTAAFL+P++ I Q P ++ + + + P A+I+APTRELA QI +E KF ++ V GG + +Q L GC +++ATPGRL+D+L+ + L +C Y+VLDEADRM+DMGFEP ++KI+ D+MP RQT+MF+AT P ++ LAR +L + +G +G E + Q + + E DKR+ L+ +L NE ++FV +KGAD L L K GF ++HG + Q +RE AL ++G+ ILVAT VA RG+DI +V VIN+D+ +E Y HRIGRTGR G G A SF + +L DL +++V S CP Sbjct: 164 EDIPVEATGDNVPDGINDFMDINMAEIMANNIKLANYSKPTPVQKHAIPAITNGRDLMACAQTGSGKTAAFLVPILNRIFEGGPPQPAPH-SKNKRSKQYPMALILAPTRELATQIFDEAKKFAYRSLVQPCVVYGGANVFEQMMDLDRGCHLLVATPGRLVDMLDRGKISLEQCKYLVLDEADRMLDMGFEPQIRKIVENDNMPPAGQ-----------------------RQTLMFSATFPKEIQMLARDFLANYIFLAVGRVGSTSENITQKIVWVDELDKRSFLLDLLEAAGLAKGPAGNED-SSLTLVFVETRKGADQLDEYLYKEGFPVTSIHGDRTQREREDALRRFRSGNTPILVATAVAARGLDIPNVKHVINFDLPSDVEEYVHRIGRTGRMGNLGLATSFFNDRNRNLTKDLVELIVES-NQQCP 573
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000010143 (supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1 gene:EMLSAG00000010143 transcript:EMLSAT00000010143 description:"augustus_masked-LSalAtl2s66-processed-gene-7.1") HSP 1 Score: 275.404 bits (703), Expect = 6.683e-85 Identity = 162/367 (44.14%), Postives = 222/367 (60.49%), Query Frame = 0 Query: 277 GYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWI--QSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIG-RPVERVEQVVCLMK-ENDKRNRLIKILNEGI-EPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDD 638 G+ P+PIQ QA P L+ D+IG+A+TG+GKT AFLLP + I QS+P+ R GP ++++PTRELA QI +E K+ GI++V V GG ++ Q + G +IVIATPGRL D++ES + + TY+VLDEADRM+DMGFEP ++KIL + +PD RQTVM +AT PP V RLA Y++ P V IGS+ V V Q + +++ E +K +RL+ N E IIF+++K D + L G + ++HGG+ Q RE AL K G IL+ATDVA RGID++D+S VIN+D S+E Y HRIGR+GRAGK G +ISF+T D Sbjct: 8 GFKNPSPIQCQAWPYLLKGLDLIGIAQTGTGKTLAFLLPSFIHIDSQSIPREKR-----GGPNVLVLSPTRELALQIADEVKKYEYR-GIKSVCVYGGGDRKAQVKVVTQGVQIVIATPGRLNDLIESGCIAVESITYLVLDEADRMLDMGFEPQIRKIL-----LDVRPD--------------------RQTVMTSATWPPGVRRLASNYMKDPITVSIGSLDLAAVHSVTQKIFVVESEEEKDDRLLDFFNNMTPEDKAIIFMSKKAKVDDYSSSLCLAGVDCQSIHGGRDQMDREQALLDFKLGHVRILIATDVASRGIDVEDISHVINFDFPNSMEEYVHRIGRSGRAGKKGSSISFMTYRD 343
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000001805 (supercontig:LSalAtl2s:LSalAtl2s1306:97666:99668:-1 gene:EMLSAG00000001805 transcript:EMLSAT00000001805 description:"maker-LSalAtl2s1306-augustus-gene-0.42") HSP 1 Score: 271.166 bits (692), Expect = 3.191e-82 Identity = 160/403 (39.70%), Postives = 226/403 (56.08%), Query Frame = 0 Query: 256 PIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPK--ITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMG-CEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDH--MPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPP---IIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFV-TQDDAHLFYDLKQML 649 PI + + + + I YT PTP+Q+ A+PI L D+I A+TGSGKTA FLLP+ I SL K I+ P +I+ PTREL QI +E K+ A + I + GG S E + L +I+ ATPGRLID+L ++ ++V+DEADRM++MGF + ++++H MP T RQT++F+AT PP ++ LA YL+ + +G +G E +EQV+ +K+ +K +L++ L E P I+IF +K+G D LA L A ++HG + QEQRE AL K G K ILVAT+VA RG+DI VSLVINYD+ + I +Y HRIGR+GR G SGK+ISF ++ D L DL +L Sbjct: 162 PINLFRDTPFTSILQDNIARCSYTRPTPVQKHAVPIILMKHDLISCAQTGSGKTAXFLLPI---IHSLHKKRISSNSSDKATPRTLILGPTRELVVQINDEARKYCAKMNIDCRVIYGGSSTESSKYILLNNRVDILSATPGRLIDMLGKEHISFENIEFLVIDEADRMLEMGFRESIDEVVNHFTMPGTTK-----------------------RQTLLFSATFPPEIQILASEYLKDYLFLKVGVVGGASEDIEQVIVQVKDYEKMTKLLETLKENEVNPETKILIFARKKRGVDFLATRLCLDKHPATSIHGDRFQEQREEALRDFKRGSKPILVATEVASRGLDIPKVSLVINYDLPQDISTYVHRIGRSGRVGNSGKSISFYESEFDRPLAKDLVNVL 538
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000011452 (supercontig:LSalAtl2s:LSalAtl2s790:154718:161369:1 gene:EMLSAG00000011452 transcript:EMLSAT00000011452 description:"maker-LSalAtl2s790-augustus-gene-1.30") HSP 1 Score: 271.166 bits (692), Expect = 1.118e-80 Identity = 163/417 (39.09%), Postives = 227/417 (54.44%), Query Frame = 0 Query: 240 FREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKR-----NRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDD----AHLFYDLKQ 647 ++ I I G + P+ + + +L+ I+ +T+PTPIQ IP+ L RD IG+A+TGSGKTA FL P+++ IQ + E GP A+I+ PTRELA QI E KFG + V GG SK +Q G EI IATPGR+ID+++ L R TY+VLDEADRM DMGFE V+ I DH+ +PD RQT++F+AT VE+LAR L P V GSIG E V Q+V ++++ + L++ + G ++IFV +K + LA+ L+ F +HG Q R + K ILVATDVA RG+DI + V+NYD+A+ I+++THRIGRTGRAG G A + VT+ D H+ +L+Q Sbjct: 258 LQQKLGIKISGVSPPKPVTSFGHFGFDEVLLKSIRKSEFTQPTPIQSIGIPVCLSGRDAIGIAKTGSGKTATFLWPIIIHIQHQRPLLNGE----GPIALILVPTRELALQIYTEAKKFGKVYDLNAVCAYGGGSKWEQSKCFESGAEIAIATPGRMIDMIKMKVTNLQRVTYLVLDEADRMFDMGFEAQVRSICDHV-----RPD--------------------RQTLLFSATFKKKVEKLARDVLTDPIKVVQGSIGEASEDVTQIVKVLEKGGYKWEWVLQNLVEFTSAG---SVLIFVTKKLNCEELAQNLKLKEFECELIHGDLNQHVRNEIIYKFKKKQFPILVATDVAARGLDIPHIRTVLNYDIARDIDTHTHRIGRTGRAGIKGTAYTLVTEKDKEFAGHIVRNLEQ 642
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000002458 (supercontig:LSalAtl2s:LSalAtl2s1472:18624:24320:1 gene:EMLSAG00000002458 transcript:EMLSAT00000002458 description:"maker-LSalAtl2s1472-snap-gene-0.14") HSP 1 Score: 273.092 bits (697), Expect = 1.014e-78 Identity = 158/429 (36.83%), Postives = 238/429 (55.48%), Query Frame = 0 Query: 245 NISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWI----QSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLG------IRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQ-DDAHLFYDLKQMLVSSPVSHCPPELS 662 +I ++G N PP++ + + P I++ +K G PT IQ Q IP L RD+IG+A TGSGK+ F+LP++++ + LP + ++GPY +I+ P+RELA+QI E + + L IR+ IGG S + ++ G IV+ATPGRL+D+L L L C Y+ LDEADRMIDMGFE DV+ I + FK + RQT++F+ATMP ++ A++ L +P V +G G + Q V +K K +I++L + PP++IF +K+ D + L G +A ++HGGK Q+ R A++ + KD+LVATDVA +G+D + VINYDM IE+Y HRIGRTGR G A + + + D ++ DLK +L+ + PP L+ Sbjct: 960 SIIVEGWNPPPPLKSFQDMKFPLPIIKALKEKGIERPTSIQMQGIPAVLSGRDLIGIAYTGSGKSLVFILPIVMFCLEQEKRLPFV-----QNEGPYGLIVVPSRELAKQIHESIYSYFSYLKKNSFPEIRSCLAIGGTSSSETMDVVKKGVHIVVATPGRLMDLLNKKMLNLEICRYLCLDEADRMIDMGFEEDVRTIFSY----------------------FKGQ---RQTLLFSATMPKKIQNFAQSALVKPITVNVGRAGAASMNIIQEVEYVKSEAKVVHIIEMLKKT-PPPVLIFAERKQDVDAIHEYLLLKGVSAVSVHGGKDQDDRSKAVTDFRNLRKDVLVATDVASKGLDFPCIQHVINYDMPDDIENYVHRIGRTGRGNFKGYATTMINKLVDENVLLDLKHLLIEAK-QKVPPFLA 1356
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000000846 (supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:-1 gene:EMLSAG00000000846 transcript:EMLSAT00000000846 description:"augustus_masked-LSalAtl2s1142-processed-gene-1.9") HSP 1 Score: 251.136 bits (640), Expect = 3.601e-76 Identity = 149/391 (38.11%), Postives = 222/391 (56.78%), Query Frame = 0 Query: 260 WDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLY-LVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQML 649 + + L + + E + +G+ P+ IQ++AIP+ L RDIIG+AETGSGKTAAF LP++ QSL LE + +A+++ PTRELA QI E+ K G S+G++ V ++GG+ Q L I+IATPGRLID +E+ L Y+++DEADR+++M FE +V KIL +P + + R+ ++F+ATM V +L R LR P V + S + V+++ Q + K L+ I+NE IIF + G LA L +GF A L+G Q +R +L+ K + IL+ATDVA RG+DI V +VINYD+ + Y HR+GRT RAG+SG+AI+FV Q D L+ ++ ++ Sbjct: 26 FSDLGLTEVLCEACESLGWKTPSKIQKEAIPVALTGRDIIGLAETGSGKTAAFALPVL---QSL-----LEKPQRF-FALVLTPTRELAYQISEQFEKLGKSIGVKCVVLVGGMDMVSQALVLGKKPHIIIATPGRLIDHMENTKGFDLRSLKYLIMDEADRILNMDFEIEVDKILSALP-----------------------RGEGRKNMLFSATMTKKVAKLQRASLRDPVRVEVSSKYQTVDKLLQYYLFIPLKYKEMYLVHIINELAGNSFIIFSSTCSGTLKLALLLRNLGFTAIPLNGQMSQNKRLASLNKFKNKSRSILIATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGRAITFVCQYDVELYQRIETLI 384
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000004918 (supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989:-1 gene:EMLSAG00000004918 transcript:EMLSAT00000004918 description:"maker-LSalAtl2s259-augustus-gene-10.16") HSP 1 Score: 252.677 bits (644), Expect = 5.279e-76 Identity = 166/470 (35.32%), Postives = 252/470 (53.62%), Query Frame = 0 Query: 198 VEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGG---NVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPV-ERVEQVVCLMKENDKRNRLIKILNEGIEPP--IIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPEL 661 ++ D + K+ R + + + + K ++ + + + + ++I + G ++ P + D ++L + L+ K + PTPIQ P+ RD+IG+AETGSGKT AF +P + I S K ++ + P +I+APTRELA Q + G +G +++ V GG++K Q L+ G EI++ATPGRL+D+ E + LS +Y+VLDEADRM+D GFE D+++IL +K RQT +F+AT P S+ +LA +L+ P V IGS + V Q+V ++ E + ++ +LN+ + I+IFV K+ AD L L K +N T+HG K Q+ R A+ K+G IL+ATDVA RG+DI DV V+NY +IE Y HRIGRTGRAGKSG A +F D +L +L S PPE+ Sbjct: 47 MDSDSTSIKKTKLSREDGDEIFKKCFYDGKGDSKLSSSEIKDYFKKHSIHVYGQGSESIVPVLSFDDMSSLGKKCLKCCKS--FKAPTPIQSMTWPVVASGRDVIGIAETGSGKTLAFSVPALAHI-SERKQRPVKGVNSMPIMLIVAPTRELAMQSQVVLESAGKEIGFKSLCVYGGVNKYAQRQSLKSGVEILVATPGRLLDLAEEGCVDLSGVSYVVLDEADRMLDQGFEQDIRRILGQT-------------------------HKERQTCLFSATWPDSIRKLAHEFLKSPIKVTIGSEDLAAGKTVTQIVEVVDERSRDGKIKGLLNKYHKKKNRILIFVLYKREADRLWNSL-KHEWNCTTIHGDKSQDARIQAVENFKSGKIPILIATDVAARGLDIPDVEYVLNYSFPLTIEDYVHRIGRTGRAGKSGIAHTFFHLGDKARAGELVNVLKESN-QDVPPEM 486
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Match: gi|160385708|sp|Q9BUQ8.3|DDX23_HUMAN (RecName: Full=Probable ATP-dependent RNA helicase DDX23; AltName: Full=100 kDa U5 snRNP-specific protein; AltName: Full=DEAD box protein 23; AltName: Full=PRP28 homolog; AltName: Full=U5-100kD) HSP 1 Score: 915.605 bits (2365), Expect = 0.000e+0 Identity = 449/671 (66.92%), Postives = 546/671 (81.37%), Query Frame = 0 Query: 20 PKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKERE--AIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKS-KNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIFV 687 PKFLSK ER AEAL++RQ VE + +ER KR QF GR+ L DP Q R+R G++ G K E +K +E AIKERYLGG+K+++R R LN+RKFVF+WDA EDTS DYNP+Y ++HQ+Q GRG I G+D+K QK+ Q +FYG+++E RRT EK+QE+ RL+K++++E KQ+WDDRHWS+K+ + MT+RDWRIFREDY+I+ KGG + PIR W +++LP ILE+I GY EPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFL+PL+VWI +LPKI R+E++D+GPYAII+APTRELAQQIEEET KFG LGIRTVAVIGG+S+EDQGF+LRMGCEIVIATPGRLIDVLE+ YLVLSRCTY+VLDEADRMIDMGFEPDVQKIL+HMPV+N KPD+D AED + NF+S K+KYRQTVMFTATMPP+VERLAR+YLRRPA+VYIGS G+P ERVEQ V LM E++KR +L+ IL +G +PPIIIFVNQKKG DVLA+ LEKMG+NA TLHGGKGQEQRE ALS LKAG KDILVATDVAGRGIDI+DVS+V+NYDMAK+IE Y HRIGRTGRAGKSG AI+F+T++D+ +FY+LKQ ++ SPVS CPPEL+NHP++Q+KPG+ KKR++E IF Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLE-------DP---QERERRERRERMERETNGNEDEEGRQKIREEKDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKPGT-ILTKKRREETIFA 820
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Match: gi|67460452|sp|Q5RC67.1|DDX23_PONAB (RecName: Full=Probable ATP-dependent RNA helicase DDX23; AltName: Full=DEAD box protein 23) HSP 1 Score: 911.368 bits (2354), Expect = 0.000e+0 Identity = 447/671 (66.62%), Postives = 544/671 (81.07%), Query Frame = 0 Query: 20 PKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKERE--AIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKS-KNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIFV 687 PKFLSK ER AEAL++RQ VE + +ER KR QF GR+ L DP Q R+R G++ G K E +K +E AIKERYLGG+K+++R R LN+RKFVF+WDA EDTS DYNP+Y ++HQ+Q GRG I G+D+K QK+ Q +FYG+++E RRT EK+QE+ R +K++++E KQ+WDDRHWS+K+ + MT+RDWRIFREDY+I+ KGG + PIR W +++LP ILE+I GY EPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFL+PL+VWI +LPKI R+E++D+GPYAII+APTRELAQQIEEET KFG LGIRTVAVIGG+S+EDQGF+LRMGCEIVIATPGRLIDVLE+ YLV SRCTY+VLDEADRMIDMGFEPDVQKIL+HMPV+N KPD+D AED + NF+S K+KYRQTVMFTATMPP+VERLAR+YLRRPA+VYIGS G+P ERVEQ V LM E++KR +L+ IL +G +PPIIIFVNQKKG DVLA+ LEKMG+NA TLHGGKGQEQRE ALS LKAG KDILVATDVAGRGIDI+DVS+V+NYDMAK+IE Y HRIGRTGRAGKSG AI+F+T++D+ +FY+LKQ ++ SPVS CPPEL+NHP++Q+KPG+ KKR++E IF Sbjct: 161 PKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLE-------DP---QERERRERRERMERETNGNEDEEGRQKIREEKDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARFRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVPSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPELANHPDAQHKPGT-ILTKKRREETIFA 820
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Match: gi|143359800|sp|A1CHL3.1|PRP28_ASPCL (RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28) HSP 1 Score: 649.047 bits (1673), Expect = 0.000e+0 Identity = 356/715 (49.79%), Postives = 462/715 (64.62%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPR-----ERQRDHFRDRWRGKGGADRG------------------SDRSGGGTKEVEGVEKEREA--IKERYLG-----GLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGV--DIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWD--DRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLE-DADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRN-RLIKILNEG-IEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQK 678 LS+EEL+ +++ +AA AKPKFLS+ ER AL KR V+A R + ERT + ER D R R + R A R +D G ++ E E + IK+RY+G KK+ +R +RKF F+W+A EDTS DYNP+Y +H+ F+GRG + G D+ + + Y LE R + + +E L+ KRR E+ + D+HWSEK+ E M ERDWRIF+ED+NIS KGG+V P+R W+E+ LP +LE++ VGY EPTPIQR AIPI LQ+RD+IGVA TGSGKTA+FLLPL+V+I LP+I E + GPYAI++APTRELAQQIE E KF LG V+++GG S E+Q + LR G EI+IATPGRL+D +E LVLS+C YI++DEADRMID+GFE V KILD +PVTN KPDSD AE+S + ++YRQT+M+TATMP +VER+AR YLRRPAIV IGS G V+ VEQ V L+ DKR RL IL+ G PPII+FVN K+ D +AR ++ MGF++ TLHG K Q+QRE AL+ ++ G D+LVATD+AGRGID+ DVSLV+N++MA SIESYTHRIGRTGRAGKSG AI+F+ +DA + YDLKQML+ SP+S P EL H +Q+KP G +K Sbjct: 79 LSVEELVRKKREADAAAAKPKFLSRAERERLALEKRAKEVDADRRLKT-ERTANGADSSSAQSTPVYPERPNSDKRVIPTGPRAMRNTEAPARSGPAATRNKNYDMTPPAPPKPMSFSLTDSKGDSKRQAEEDETVAQVALIKQRYMGEEKTSNFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQHRHEANFYGRGRLAGFGDDVAD---SLAKKYARALEDRDQEAGSIRAREMLEMEKRRREESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESGLPKRLLELVDRVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTQPLGFNVVSIVGGHSLEEQAYSLRNGAEIIIATPGRLVDCIERRILVLSQCCYIIMDEADRMIDLGFEEPVNKILDALPVTNEKPDSDEAENSAAM-----RSHRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVELIAGEDKRKKRLADILSSGEFRPPIIVFVNIKRNCDAIAREIKHMGFSSVTLHGSKTQDQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEELRKHEAAQSKPTRGYAKK 784
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Match: gi|161784285|sp|Q5BCU6.2|PRP28_EMENI (RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28) HSP 1 Score: 644.425 bits (1661), Expect = 0.000e+0 Identity = 358/708 (50.56%), Postives = 469/708 (66.24%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRD---HFRDRWRGKGGADRG-----SDRSGGGTKEVEGVEK----------EREAIKERYLGG-----LKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGV--DIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWD--DRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLE-DADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKR-NRLIKILNEG-IEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQK 678 LS+EEL+ +++ +AA A+PKF+SK ER AL KR V+A R RT +G L R R P R R G G G S G TK + V+K + IK+RY+G KK+ +R +RKF F+W+A EDTS DYNP+Y +H+ FFGRG + G D+ + + Y + LE R + + +E L+ +RR E+ + D+HWSEK+ E M ERDWRIF+ED+NI+ KGG+V P+R WDE+ LP +LE++ VGY EPTPIQR AIPI +Q+RD+IGVA TGSGKTAAFLLPL+ +I LP+I E + GPYAI++APTRELAQQIE E KF LG V+++GG S E+Q + LR G EI+IATPGRL+D +E LVLS+C Y+++DEADRMID+GFE V KILD +PVTN KPD++ AEDS+ ++ + SK++YRQT+M+TATMP +VER+AR YLRRPAIV IGS G V+ VEQ V ++ DKR RL +IL+ G PPII+FVN K+ D +AR +++ GF++ TLHG K QEQRE AL+ ++ G D+LVATD+AGRGID+ DVSLVIN++MA SIESYTHRIGRTGRAGKSG AI+F+ +DA + YDLKQML+ SP+S P EL H +Q+KP GA +K Sbjct: 71 LSVEELVRKKREADAAAARPKFMSKAERERLALEKRAKEVDAQR-----RRTNGTPNGVDG-MDLDTPSRGFRTPNGDSRSIPTGPRAMRNGDGPTPTGPAAMRSRNDSGTTKSDKKVDKRFNEEDEAAAQAALIKQRYMGADQTSNFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQHRHEANFFGRGRLAGFGDDVAD---SVAKKYAKALEDRDREAGSIRAREILEMERRRREESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNIATKGGSVPNPMRSWDESGLPKRLLELVDRVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLCYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAEDSSAMSRHLGSKDRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLGEILSSGDFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVINFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLIKSPISRVPEELRKHEAAQSKPTRGAGKK 769
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Match: gi|442570033|sp|Q1DMX8.2|PRP28_COCIM (RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28) HSP 1 Score: 633.254 bits (1632), Expect = 0.000e+0 Identity = 343/721 (47.57%), Postives = 458/721 (63.52%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALR----------------------DQQADERTKRHQFDREGRQQL----RAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLGG-----LKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWD----DRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLE-DADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKR-NRLIKILNEG-IEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDE 683 LS+EELL ++K + A ++PKFL+K +R AL KR +E R + +A T+ + R + RA+ E R + G SD + G K + + ++RY+G KK+ RR ERKF F+W+A EDTS DYNP+Y ++ ++ FFGRG + G + + Y + LE R D+E + R R +++ D HWS+K + M ERDWRIF+ED+NIS KGG++ P+R W E+ LP +LEII VGY +P+PIQR AIPI LQNRD+IGVA TGSGKTAAFLLPL+V+I LP++ E GPYAII+APTRELAQQIE E KF LG V+++GG S E+Q F LR G EI+IATPGRL+D +E LVLS+C Y+++DEADRMID+GFE V KILD +PV+N KPD++ AED+ ++++ K++YRQT+M+TATMP +VER+AR YLRRPAIV IG+IG V+ VEQ V + DKR RL IL G PPII+FVN K+ D +AR +++MG+++ TLHG K QEQRE AL+ ++ G+ D+LVATD+AGRGID+ DVSLV+N++MA +IESYTHRIGRTGRAGKSG AI+F+ +DA + YDLKQML+ S +S P EL H +Q+KP +KR DE Sbjct: 91 LSVEELLRKKKEADEAASRPKFLTKSQREKLALEKRAKEIEHERRIRAASTNGSMMSDSNGGGGNSNGRASPTTRYDNVNGSSRTSIPTAPRALRGEIPTAPAAMRSSQAKNNDPRPGNKVPSDSAATGEKRTAPEDAQALLTRQRYMGADQTSSFSAKKKRRRTTERKFNFEWNADEDTSPDYNPLYQNRSEMNFFGRGRLAGFS-DDVVDSAAKRYAKALEDR--DLEAGSARAREILEMERRRREEGGRNGLDLHWSQKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSWGESGLPKRLLEIIDKVGYKDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYIAELPRLDEFEWRKSDGPYAIILAPTRELAQQIENEARKFCNPLGFNVVSIVGGHSLEEQSFSLRNGAEIIIATPGRLVDCIERRILVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDTEEAEDARAMSQHLGGKDRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGNIGEAVDTVEQRVEFISGEDKRKKRLADILASGEFRPPIIVFVNIKRNCDAVARDIKQMGYSSVTLHGSKTQEQREAALASVRNGNTDVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLMKSSISRVPEELRKHEAAQSKPTKAGGGQKRLDE 808
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Match: gi|91207407|sp|Q2UH00.1|PRP28_ASPOR (RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28) HSP 1 Score: 632.484 bits (1630), Expect = 0.000e+0 Identity = 348/721 (48.27%), Postives = 464/721 (64.36%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKR-------------HQFDREGRQQLRAIEREQRD--PRERQRDHFRDRWR------GKGGADRGSDRSGGGTKEVEG--VEKEREAIKERYLGG-----LKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGV--DIKSQKKTQGQFYGEMLETRRTDVE--KDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLE-DADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKR-NRLIKILNEG-IEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIF 686 LS+EEL+ +++ +AA A+PKFLS+ ER AL KR VEA R +A R H R RA+ P + H ++ R G S G + V+ V + +K+RY+G KK+ +R +RKF F+W+A EDTS DYNP+Y +H+ FFGRG + G D+ + Y LE R + + +E +++ +R E + D+HWSEK+ E M ERDWRIF+ED+NIS KGG+V P+R WDE+ LP ++E++ VGY EPTPIQR AIPI +Q+RD+IGVA TGSGKTA+FLLPL+V+I LP+I E + GPYAI++APTRELAQQIE E KF LG V+++GG S E+Q + LR G EI+IATPGRL+D +E LVLS+C Y+++DEADRMID+GFE V KILD +PV+N KPDS+ AE+S ++++ +K++YRQT+M+TATMP +VER+AR YLRRPAIV IGS G V+ VEQ V + DKR RL IL+ G PPII+FVN K+ D +AR +++ GF++ TLHG K QEQRE AL+ ++ G D+LVATD+AGRGID+ DVSLVIN++MA +IESYTHRIGRTGRAGKSG AI+F+ +D + YDLKQM++ S +S P EL H +Q+KP G KK D F Sbjct: 81 LSVEELVRKKREADAAAARPKFLSRAERERIALEKRAKEVEAERRLKASNGVDRSATQSPSVSSEVNHSDGRTIPTGPRAMRSSDTPTAPAAMRNSHSHNKNRDLSPPPPPKSMSFGLASSKGDKRPVDDDEVAAQVALVKQRYMGADQTSTFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQHRHEANFFGRGRLAGFGDDVADNVAKK---YARALEDRDHEAGGIRAREILEMERRRREESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWDESGLPKRLMELVNKVGYKEPTPIQRAAIPIAMQSRDLIGVAVTGSGKTASFLLPLLVYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTEPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRMLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSEEAENSMAMSQHIGTKDRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEFIAGEDKRKKRLGDILSSGEFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGQTDVLVATDLAGRGIDVPDVSLVINFNMATTIESYTHRIGRTGRAGKSGVAITFLGNEDTDVMYDLKQMIMKSSISRLPEELRKHEAAQSKPTRGF-AKKNDDNSAF 797
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Match: gi|160419160|sp|A7EGG4.1|PRP28_SCLS1 (RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28) HSP 1 Score: 631.328 bits (1627), Expect = 0.000e+0 Identity = 344/725 (47.45%), Postives = 455/725 (62.76%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKR-----------------------HQFDREGRQQL------RAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREA-------IKERYLGG------LKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWD--DRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKR-NRLIKILNEG-IEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKK 679 LS+E++L ++K + A AKPKFLSK R AL KR VE R ++ E+ R HQ D R RA+ Q++ D D A + +G V G ++ A I+ RY+G KK+ RR E+KF F+W+A EDTS DYNPIY ++ + +GRG + G ++ + Y + LE R + + +E ++ +RR+E + D+HWSEK+ E M ERDWRIF+ED+NIS KGG + P+R W E+ LP +L++I VGY EP+ +QR AIPI LQ RD+IGVA TGSGKTAAFLLPL+V+I LP + D GPYAII+APTRELAQQIE E KF LG V+++GG S E+Q + LR G EI+IATPGRL+D +E LVL +C YI++DEADRMID+GFE V KILD +PV+N KPD+D AED+ ++ + K++YRQT+M+TATMPP+VE++A+ YLRRPAIV IG+IG VE VEQ V + DKR RL +IL G +PPII+FVN K+ D +AR ++ MGF + TLHG K QEQRE AL+ +++G ++LVATD+AGRGID+ DVSLV+N++MA +IESYTHRIGRTGRAGKSG AI+F+ +DA YDLKQML+ S +S P EL H +Q K G KK Sbjct: 83 LSIEDILKKKKEADEAAAKPKFLSKAAREKLALEKRAKEVEEQRRKRESEQDNRIPVGTVNGNGYGAANGRDGYERSHQQDNARRDSSFVPTGPRAMRNGQQN--RPSSDKPNDMEPPPKSAKPATTAAGSSKASVAGEKRPANAEDLQAALIRTRYMGAETNQSTFSAKKKRRRTTEKKFNFEWNAEEDTSPDYNPIYQNRAEAGLYGRGRLAGF---AEDEAATLKYAKALEERDIEAGSARAREIVEMERRRKEDAGRNSLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGAIPNPMRSWSESKLPKRLLDVINQVGYDEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELPPLNEFTKND-GPYAIILAPTRELAQQIEVEAKKFATPLGFTCVSIVGGHSLEEQSYNLRNGAEIIIATPGRLVDCIERRVLVLGQCCYIIMDEADRMIDLGFEESVNKILDALPVSNEKPDTDDAEDAQAMSRHLGGKDRYRQTMMYTATMPPAVEKIAKKYLRRPAIVTIGNIGEAVETVEQRVEFVAGEDKRKKRLNEILASGEFQPPIIVFVNIKRNCDAVARDIKHMGFTSVTLHGSKTQEQREAALASVRSGATNVLVATDLAGRGIDVPDVSLVVNFNMATNIESYTHRIGRTGRAGKSGVAITFLGNEDADTMYDLKQMLMKSSISRVPEELRKHEAAQQKSQRGQGLKK 801
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Match: gi|121738078|sp|Q0CLX0.1|PRP28_ASPTN (RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28) HSP 1 Score: 627.091 bits (1616), Expect = 0.000e+0 Identity = 348/707 (49.22%), Postives = 464/707 (65.63%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQA-----------DERTKRHQFDREGRQQL--RAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLGG-----LKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGV--DIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWD--DRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLE-DADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKS----KNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRN-RLIKILNEG-IEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQK 678 LS+EEL+ +++ +AA AKPKFLSK+ER AL KR VE R + + E + DR RA+ + P R R G + S+ + GT + + + +K+RY+G KK+ +R +RKF F+W+A EDTS+DYNP+YA +H+ FFGRG + G D+ + Y LE R + + +E L+ +RR E+ + D+HWSEK+ E M ERDWRIF+ED+NI+ KGG+V P+R W E+ LP +L+++ VGY +PTPIQR AIPI +Q+RD+IGVA TGSGKTAAFLLPL+V+I LP+I E + GPYAI++APTRELAQQIE E KF LG V+++GG S E+Q + LR G EI+IATPGRL+D +E LVLS+C Y+++DEADRMID+GFE V KILD +PV+N KPDSD AE++ +++ + +YRQT+M+TATMP +VER+AR YLRRPAIV IGS G V+ VEQ V L+ DKR RL IL+ G PPII+FVN K+ D +AR +++ GF++ TLHG K QEQRE AL+ ++ G D+LVATD+AGRGID+ DVSLV+N++MA SIESYTHRIGRTGRAGKSG AI+F+ +DA + YDLKQML+ SP+S P EL H +Q KP G +K Sbjct: 71 LSVEELVRKKREADAAAAKPKFLSKKEREKIALEKRAKEVEQSRRKTSTNGASDTASVRSESATPNGVDRTASIPTGPRAMRTSEAPPPPRPRHDSSS----NGNGNSNSNSNSNGTVDEDEAAAQAALVKQRYMGAEMTSSFSAKKKRKRTTDRKFNFEWNAEEDTSRDYNPLYAQRHEANFFGRGRLAGFGDDVADGVARK---YAAALEDRDREAGSVRAREILEMERRRREESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNIATKGGSVPNPMRSWAESGLPSRLLDLVHRVGYKDPTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLVYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTIPLGFTVVSIVGGHSLEEQAYSLRNGAEIIIATPGRLVDCIERRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVSNEKPDSDAAENAAAMSQLHHAGGGRDTRYRQTMMYTATMPTAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVELIAGEDKRKKRLGDILSSGEFRPPIIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMATSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLIKSPISRVPDELRKHEAAQQKPTRGFSKK 770
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Match: gi|74671396|sp|Q4WPE9.1|PRP28_ASPFU (RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28) HSP 1 Score: 620.157 bits (1598), Expect = 0.000e+0 Identity = 348/721 (48.27%), Postives = 461/721 (63.94%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSK--------EERVAEALRKRQAHVEALRD----------------QQADERT-------KRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLG-----GLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGV--DIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWD--DRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLE-DADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRN-RLIKILNEG-IEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQK 678 LS+EEL+ +++ +AA AKPKFLSK E+R E R+ ++ D DER+ R+ G +R + P + F GKG + R E + + IK++Y+G KK+ +R +RKF F+W+A EDTS DYNP+Y +H+ F+GRG + G D+ T Q Y LE R + + +E L+ +RR E+ + D+HWSEK+ E M ERDWRIF+ED+NIS KGG+V P+R W+E+ LP +LE++ VGY EPTPIQR AIPI LQ+RD+IGVA TGSGKTA+FLLPL+V+I LP+I E + GPYAI++APTRELAQQIE E KF LG V+++GG S E+Q + LR G EI+IATPGRL+D +E LVLS+C Y+++DEADRMID+GFE V KILD +PVTN KPD++ AE+S + ++YRQT+M+TATMP +VER+AR YLRRPAIV IGS G V+ VEQ V ++ DKR RL IL+ G PPII+FVN K+ D +AR +++MGF++ TLHG K QEQRE AL+ ++ G D+LVATD+AGRGID+ DVSLV+N++MA SIESYTHRIGRTGRAGKSG AI+F+ +DA + YDLKQML+ SP+S P EL H +Q+KP G +K Sbjct: 79 LSVEELVRKKREADAAAAKPKFLSKAERERIALEKRAKEVEAGRRLKLDPFTDGTDRSGTQSPSVYPETPNGDERSIPTGPRAMRNSEVPTGPAAMRNKTYDMSPPPPPKAMSF-SLTDGKGDSKR--------QAEEDEAAAQAALIKQKYMGTEKTSSFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQQRHEANFYGRGRLAGFGDDVAD---TLAQKYARALEDRDREAGSIRAREILEMERRRREESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESGLPKRLLELVDQVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYISELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEARKFTQPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAENSAAM-----RSHRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLADILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEELRKHEAAQSKPNRGLAKK 782
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Match: gi|143359899|sp|A1CX72.1|PRP28_NEOFI (RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28) HSP 1 Score: 618.231 bits (1593), Expect = 0.000e+0 Identity = 315/574 (54.88%), Postives = 410/574 (71.43%), Query Frame = 0 Query: 117 IKERYLG-----GLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGV--DIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWD--DRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLE-DADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRN-RLIKILNEG-IEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQK 678 IK++Y+G KK+ +R +RKF F+W+A EDTS DYNP+Y +H+ F+GRG + G D+ T Q Y LE R + + +E L+ +RR E+ + D+HWSEK+ E M ERDWRIF+ED+NIS KGG+V P+R W+E+ LP +LE++ VGY EPTPIQR AIPI LQ+RD+IGVA TGSGKTA+FLLPL+V+I LP+I E + GPYAI++APTRELAQQIE E KF LG V+++GG S E+Q + LR G EI+IATPGRL+D +E LVLS+C Y+++DEADRMID+GFE V KILD +PVTN KPD++ AE+S + ++YRQT+M+TATMP +VER+AR YLRRPAIV IGS G V+ VEQ V ++ DKR RL IL+ G PPII+FVN K+ D +AR +++MGF++ TLHG K QEQRE AL+ ++ G D+LVATD+AGRGID+ DVSLV+N++MA SIESYTHRIGRTGRAGKSG AI+F+ +DA + YDLKQML+ SP+S P EL H +Q+KP G +K Sbjct: 217 IKQKYMGTEKTSSFSAKKKRKRTTDRKFNFEWNAEEDTSGDYNPLYQQRHEANFYGRGRLAGFGDDVAD---TLAQKYARALEDRDREAGSIRAREILEMERRRREESTRNQLDKHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWEESGLPKRLLELVDQVGYKEPTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYISELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEARKFTQPLGFNVVSIVGGHSFEEQAYSLRNGAEIIIATPGRLVDCIERRLLVLSQCCYVIMDEADRMIDLGFEEPVNKILDALPVTNEKPDTEEAENSAAM-----RSHRYRQTMMYTATMPSAVERIARKYLRRPAIVTIGSAGEAVDTVEQRVEMIAGEDKRKKRLADILSSGEFRPPIIVFVNIKRNCDAIAREIKQMGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDLAGRGIDVPDVSLVVNFNMANSIESYTHRIGRTGRAGKSGVAITFLGNEDADVMYDLKQMLMKSPISRVPEELRKHEAAQSKPNRGFAKK 782
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Match: gi|1061116784|ref|XP_017884426.1| (PREDICTED: probable ATP-dependent RNA helicase DDX23 [Ceratina calcarata]) HSP 1 Score: 980.319 bits (2533), Expect = 0.000e+0 Identity = 478/687 (69.58%), Postives = 569/687 (82.82%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIFV 687 LSLEELLA++KAEE A+AKPKFLSKEER A AL+KRQ V+A+R QQ + R + G+ + E + RD R R+ S R+ + + EKE EAIKERYLG +K+K+R+RRLN+RKFVFDWD EDTS DYN IY ++HQ+QFFGRG + G+DIK+QK+ Q +FYGE+LE RRT+ EK+QEK RLKK+KR+EEKQKWDDRHWSEK MTERDWRIFREDYNI+IKGG + PIR W E+ P EIL+II VGY + TPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PL++WI SLPKI RLE+AD+GPY+II+APTRELAQQIEEETNKFG LGIRTV V+GGLS+E+QGF+LRMGCEIVIATPGRLIDVLE+ YLVL++CTYIVLDEADRMIDMGFEPDVQKIL++MPVTN KPD++ AE+ L N+ +K KYRQTVMFTATMPP+VERLARTYLRRPA+VYIGS+G+P ER EQ+V +M E DKR +L++IL+ G+EPP+IIFVNQKKGADVLARGLEK+G+NA TLHGGKGQEQRE+AL+ LK+G KDILVATDVAGRGIDIKDVS+VINYDMAK+IE YTHRIGRTGRAGK+G AISF T+DD+HLFYDLKQ +++SP+S CPPEL NHP++Q+KPG+ KKR++EKIF Sbjct: 125 LSLEELLAKKKAEEDARAKPKFLSKEERAALALQKRQEEVDAIRKQQEEARKSFFHNETPGKDR----EWDDRDSRRRE-----------------SQRAREDDIKDKDKEKEVEAIKERYLGLVKKKRRVRRLNDRKFVFDWDTSEDTSVDYNSIYKERHQVQFFGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRLKKVKRKEEKQKWDDRHWSEKALHEMTERDWRIFREDYNITIKGGRIPDPIRSWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGKPTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGT-VVTKKRREEKIFA 789
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Match: gi|1068422227|ref|XP_018055820.1| (PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform X2 [Atta colombica] >gi|1009351574|gb|KYM77044.1| putative ATP-dependent RNA helicase DDX23 [Atta colombica]) HSP 1 Score: 980.319 bits (2533), Expect = 0.000e+0 Identity = 475/686 (69.24%), Postives = 567/686 (82.65%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIF 686 LSLEELLA++KAEE A+AKPKFLSKEER A AL KRQ VEA+R QQ +ER D +++ +R+ + + + +D+ + EKE EAIKERYLG +K+K+R+RRLN+RKFVFDWD EDTS DYN IY ++HQ+QFFGRG + G+DIK+QK+ Q +FYGE+LE RRT+ EK+QEK RLKK+KR+EEKQKWDDRHWSEK MTERDWRIFREDYNI+IKGG + PIR W E+ P EIL+II VGY + TPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PL++WI SLPKI RLE+AD+GPY+II+APTRELAQQIEEETNKFG LGIRTV V+GGLS+E+QGF+LRMGCEIVIATPGRLIDVLE+ YLVL++CTYIVLDEADRMIDMGFEPDVQKIL++MPVTN KPD++ AE+ L N+ +K KYRQTVMFTATMPP+VERLARTYLRRPA+VYIGS+G+P ER EQ+V +M E DKR +L++IL+ G+EPP+IIFVNQKKGADVLARGLEK+G+NA TLHGGKGQEQRE+AL+ LK+G KDILVATDVAGRGIDIKDVS+VINYDMAK+IE YTHRIGRTGRAGK+G AISF T+DD+HLFYDLKQ +++SP+S CPPEL NHP++Q+KPG+ KKR++EKIF Sbjct: 125 LSLEELLAKKKAEEEARAKPKFLSKEERAALALEKRQQEVEAIRRQQEEERKLLSHSDNTNKEREWDDRDRRRESQRSRDEDIKDKDK----------------------EKEVEAIKERYLGLVKKKRRVRRLNDRKFVFDWDTSEDTSVDYNSIYKERHQVQFFGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRLKKVKRKEEKQKWDDRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGKPTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGT-VVTKKRREEKIF 787
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Match: gi|1070208599|ref|XP_018373354.1| (PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform X1 [Trachymyrmex cornetzi] >gi|1070208601|ref|XP_018373356.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform X1 [Trachymyrmex cornetzi]) HSP 1 Score: 979.934 bits (2532), Expect = 0.000e+0 Identity = 482/686 (70.26%), Postives = 567/686 (82.65%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIF 686 LSLEELLA++KAEE A+AKPKFLSKEER A AL KRQ VEA+R QQ +ER D + ERE D R+R+ R R D+ EKE EAIKERYLG +K+K+R+RRLN+RKFVFDWD EDTS DYN IY ++HQ+QFFGRG + G+DIK+QK+ Q +FYGE+LE RRT+ EK+QEK RLKK+KR+EEKQKWDDRHWSEK MTERDWRIFREDYNI+IKGG + PIR W E+ P EIL+II VGY + TPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PL++WI SLPKI RLE+AD+GPY+II+APTRELAQQIEEETNKFG LGIRTV V+GGLS+E+QGF+LRMGCEIVIATPGRLIDVLE+ YLVL++CTYIVLDEADRMIDMGFEPDVQKIL++MPVTN KPD++ AE+ L N+ +K KYRQTVMFTATMPP+VERLARTYLRRPA+VYIGS+G+P ER EQ+V +M E DKR +L++IL+ G+EPP+IIFVNQKKGADVLARGLEK+G+NA TLHGGKGQEQRE+AL+ LK+G KDILVATDVAGRGIDIKDVS+VINYDMAK+IE YTHRIGRTGRAGK+G AISF T+DD+HLFYDLKQ +++SP+S CPPEL NHP++Q+KPG+ KKR++EKIF Sbjct: 125 LSLEELLAKKKAEEEARAKPKFLSKEERAALALEKRQQEVEAIRRQQEEERKLLSHSDNISK------EREWDDRDSRRRESQRSRDEDIKDKDK---------------EKEVEAIKERYLGLVKKKRRVRRLNDRKFVFDWDTSEDTSVDYNSIYKERHQVQFFGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRLKKVKRKEEKQKWDDRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGKPTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGT-VVTKKRREEKIF 788
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Match: gi|801371389|ref|XP_012062376.1| (PREDICTED: probable ATP-dependent RNA helicase DDX23 [Atta cephalotes] >gi|1068422224|ref|XP_018055819.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform X1 [Atta colombica]) HSP 1 Score: 979.934 bits (2532), Expect = 0.000e+0 Identity = 482/686 (70.26%), Postives = 567/686 (82.65%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIF 686 LSLEELLA++KAEE A+AKPKFLSKEER A AL KRQ VEA+R QQ +ER D + ERE D R+R+ R R D+ EKE EAIKERYLG +K+K+R+RRLN+RKFVFDWD EDTS DYN IY ++HQ+QFFGRG + G+DIK+QK+ Q +FYGE+LE RRT+ EK+QEK RLKK+KR+EEKQKWDDRHWSEK MTERDWRIFREDYNI+IKGG + PIR W E+ P EIL+II VGY + TPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PL++WI SLPKI RLE+AD+GPY+II+APTRELAQQIEEETNKFG LGIRTV V+GGLS+E+QGF+LRMGCEIVIATPGRLIDVLE+ YLVL++CTYIVLDEADRMIDMGFEPDVQKIL++MPVTN KPD++ AE+ L N+ +K KYRQTVMFTATMPP+VERLARTYLRRPA+VYIGS+G+P ER EQ+V +M E DKR +L++IL+ G+EPP+IIFVNQKKGADVLARGLEK+G+NA TLHGGKGQEQRE+AL+ LK+G KDILVATDVAGRGIDIKDVS+VINYDMAK+IE YTHRIGRTGRAGK+G AISF T+DD+HLFYDLKQ +++SP+S CPPEL NHP++Q+KPG+ KKR++EKIF Sbjct: 125 LSLEELLAKKKAEEEARAKPKFLSKEERAALALEKRQQEVEAIRRQQEEERKLLSHSDNTNK------EREWDDRDSRRRESQRSRDEDIKDKDK---------------EKEVEAIKERYLGLVKKKRRVRRLNDRKFVFDWDTSEDTSVDYNSIYKERHQVQFFGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRLKKVKRKEEKQKWDDRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGKPTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGT-VVTKKRREEKIF 788
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Match: gi|769846737|ref|XP_011634684.1| (PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform X2 [Pogonomyrmex barbatus]) HSP 1 Score: 979.934 bits (2532), Expect = 0.000e+0 Identity = 475/686 (69.24%), Postives = 565/686 (82.36%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIF 686 LSLEELLA++KAEE A+AKPKFL+KEER AL KRQ VE +R QQ +ER D G+++ +RD + + D +D+ + EKE EAIKERYLG +K+K+R+RRLN+RKFVFDWD EDTS DYN IY ++HQ+QFFGRG + G+DIK+QK+ Q +FYGE+LE RRT+ EK+QEK RLKK+KR+EEKQKWDDRHWSEK MTERDWRIFREDYNI+IKGG + PIR W E+ P EIL+II VGY + TPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PL++WI SLPKI RLE+AD+GPY+II+APTRELAQQIEEETNKFG LGIRTV V+GGLS+E+QGF+LRMGCEIVIATPGRLIDVLE+ YLVL++CTYIVLDEADRMIDMGFEPDVQKIL++MPVTN KPD++ AE+ L N+ +K KYRQTVMFTATMPP+VERLARTYLRRPA+VYIGS+G+P ER EQ+V +M E DKR +L++IL+ G+EPP+IIFVNQKKGADVLARGLEK+G+NA TLHGGKGQEQRE+AL+ LK G KDILVATDVAGRGIDIKDVS+VINYDMAK+IE YTHRIGRTGRAGK+G AISF T+DD+HLFYDLKQ +++SP+S CPPEL NHP++Q+KPG+ KKR++EKIF Sbjct: 127 LSLEELLAKKKAEEEARAKPKFLTKEERAILALEKRQQEVEVIRKQQEEERKLLFHNDSTGKEREWDDRDRRRDGQRSREDEIKDKDK----------------------EKEVEAIKERYLGLVKKKRRVRRLNDRKFVFDWDTSEDTSVDYNSIYKERHQVQFFGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRLKKVKRKEEKQKWDDRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGKPTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQREYALASLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGT-VVTKKRREEKIF 789 The following BLAST results are available for this feature:
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold10_size831480:35444..39216- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold10_size831480-processed-gene-0.11 ID=snap_masked-scaffold10_size831480-processed-gene-0.11|Name=pre-mrna-splicing atp-dependent rna helicase|organism=Tigriopus kingsejongensis|type=gene|length=3773bp|location=Sequence derived from alignment at scaffold10_size831480:35444..39216- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'pre-mrna-splicing atp-dependent rna helicase' has the following synonyms
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