pre-mrna-splicing atp-dependent rna helicase, snap_masked-scaffold10_size831480-processed-gene-0.11 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000008048 (supercontig:LSalAtl2s:LSalAtl2s479:213954:217803:1 gene:EMLSAG00000008048 transcript:EMLSAT00000008048 description:"maker-LSalAtl2s479-augustus-gene-2.18") HSP 1 Score: 1034.25 bits (2673), Expect = 0.000e+0 Identity = 521/684 (76.17%), Postives = 581/684 (84.94%), Query Frame = 0 Query: 11 KAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKERE-------AIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIFV 687 +A E +KPKFL+KE+R+AEAL++RQ +A+R + +ER KR FDR ++ D FR R G D S +E + ++E++ AIK+RYLG +K+KKRIRRLN+RKFVFDWD GEDTS DYNP+Y D+H IQFFGRGGIGG+DIKSQKK QGQFYG++ E RRTD EKDQEKERLKK+KRRE+KQKWDDRHW+EKE E M ERDWRIFREDYNI+IKGGN+ PIR+W EA L EILEII+ VGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKT AFLLPL+VWIQSLPK TR+ED D+GPYAIIMAPTRELAQQIEEE N FG LGI TVAVIGGLS+EDQGFKLR+GCEIVIATPGRLIDVLE+ YLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPD+D AE+ L EN +SKNKYRQTVMFTATMPP+VERLARTYLRRPA+VYIGSIGRPVERVEQVV +MKENDKRN+LI ILN GIEPPIIIFVNQKKGAD LA+GLEKMG+NAATLHGGKGQEQRE+ALSGLKAG+KDILVATDVAGRGIDIK+VSLVINYDMAKSIE YTHRIGRTGRAGKSGKAISF TQ+D+ LFYDLKQML+SSPVSHCPPEL+NHPE+Q+KPG+ QKKRKDEKIFV Sbjct: 94 RAAEEEASKPKFLTKEQRIAEALKRRQEEGDAIRRARDEERKKRDDFDRASFKE----------------DTFRKR--------SGRDHSLYSKRETQEEDQEKKRKDEEKVAIKDRYLGAIKKKKRIRRLNDRKFVFDWDTGEDTSNDYNPLYNDRHNIQFFGRGGIGGIDIKSQKKEQGQFYGDLAERRRTDAEKDQEKERLKKVKRREDKQKWDDRHWTEKELESMAERDWRIFREDYNIAIKGGNIPHPIRKWKEACLSPEILEIIEKVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTCAFLLPLLVWIQSLPKTTRMEDQDQGPYAIIMAPTRELAQQIEEECNTFGGPLGIXTVAVIGGLSREDQGFKLRLGCEIVIATPGRLIDVLENRYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDNDEAENEAALLENIRSKNKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSIGRPVERVEQVVYMMKENDKRNKLISILNNGIEPPIIIFVNQKKGADKLAQGLEKMGYNAATLHGGKGQEQREYALSGLKAGNKDILVATDVAGRGIDIKNVSLVINYDMAKSIEPYTHRIGRTGRAGKSGKAISFCTQEDSPLFYDLKQMLMSSPVSHCPPELANHPEAQSKPGT-VVQKKRKDEKIFV 752
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000011390 (supercontig:LSalAtl2s:LSalAtl2s787:174367:180499:1 gene:EMLSAG00000011390 transcript:EMLSAT00000011390 description:"augustus_masked-LSalAtl2s787-processed-gene-0.30") HSP 1 Score: 311.997 bits (798), Expect = 7.393e-95 Identity = 183/435 (42.07%), Postives = 256/435 (58.85%), Query Frame = 0 Query: 232 MTERDWRIFR-EDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASL-GIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRC---TYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNE-GIEPPIIIFVNQKKGADVLARGLEKMGF-NAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYD-LKQMLVSSPVSHCP 658 MT + ++R E I +KG N PI+ W A + IL+++K GY +PTPIQ QAIPI + RD+IG+A+TGSGKT AFLLPL I + P+ LE+ D GP AIIM PTREL QI +E KF ++ G R+V V GG +Q +L+ G EI++ TPGR+ID+L + ++ C TY+VLDEADRM DMGFEP V +I+D N +PD +Q VMF+AT P +E LAR L +P V +G + ++Q V +++E K +L+++L + E IIIFV++++ AD L + L + + A+LHGG Q R+ ++ K G ILVAT VA RG+D+K++ LV+NYD E Y HR GRTGRAG SG A +F+T + + +K M +S V P Sbjct: 195 MTSDEVEVYRLELEGIKVKGKNAPKPIKNWTHAGVSQRILDLLKRNGYEKPTPIQTQAIPIIMSGRDMIGIAKTGSGKTLAFLLPLFRHIMAQPE---LEEGD-GPIAIIMTPTRELCMQIGKEIKKFSKAIKGARSVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNCRRITYVVLDEADRMFDMGFEPQVSRIID-----NCRPD--------------------KQMVMFSATFPRQMEALARRILCKPVEVTVGGRSVVCKDIDQSVYVLEEEHKFLKLLELLGQRSSEGLIIIFVDKQEHADSLLKDLMSASYTSCASLHGGVDQYDRDSIITNFKNGKVKILVATSVAARGLDVKELVLVVNYDCPNHYEDYVHRCGRTGRAGNSGFAATFLTPEQGRYAGEVIKAMELSDAVVPAP 600
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000011189 (supercontig:LSalAtl2s:LSalAtl2s760:470421:474651:1 gene:EMLSAG00000011189 transcript:EMLSAT00000011189 description:"maker-LSalAtl2s760-augustus-gene-3.33") HSP 1 Score: 291.197 bits (744), Expect = 8.257e-88 Identity = 171/418 (40.91%), Postives = 245/418 (58.61%), Query Frame = 0 Query: 240 FREDYNISI-KGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIG-RPVERVEQVVCLMKENDKRNRLIKILNE-GIEP--PIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSS 652 +R++ I+I +G N+ PI + EA PD IL+ K G+ PT IQ Q PI L +++G+A TGSGKT +LLP ++ + + P LE+ D GP +++APTRELAQQI+E ++FG + I++ + GG K Q L GCEIVIATPGRLID+LE + + RCTY+VLDEADRM+DMGFEP ++KI++ + +PD RQ +M++AT P V RLA +L + IG+ + Q+V + ++ K +L ++L E G EP I+IFV K+ AD L R + + G+ A +HG K Q++R+ L K G IL ATDVA RG+D+ DV VINYD + E Y HRIGRTGR ++G A + T ++ DL +L+ + Sbjct: 96 YRDEKEITIVRGHNIPNPILDFTEAGFPDYILKEFKRQGFERPTAIQSQGWPIALSGSNMVGIAMTGSGKTCGYLLPGIIHVNNQP---YLEEGD-GPIVLVLAPTRELAQQIQEVASEFGRTSRIKSTCIFGGAPKGPQLRDLERGCEIVIATPGRLIDILEMGKINMRRCTYLVLDEADRMLDMGFEPQIRKIIEQI-----RPD--------------------RQVLMWSATWPKEVRRLAEDFLDDYVHINIGAATLHANHNILQIVDVCEDFQKEEKLARLLEEIGCEPHNKILIFVETKRKADELTRLMRRDGYPAMCIHGDKQQKERDWVLGEFKHGATTILXATDVAARGLDVDDVKFVINYDYPNNSEDYIHRIGRTGRKDRTGTAYTLFTSGNSAKAKDLVDVLLEA 484
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000005110 (supercontig:LSalAtl2s:LSalAtl2s26:913218:916036:-1 gene:EMLSAG00000005110 transcript:EMLSAT00000005110 description:"maker-LSalAtl2s26-augustus-gene-8.40") HSP 1 Score: 286.574 bits (732), Expect = 1.282e-87 Identity = 167/436 (38.30%), Postives = 243/436 (55.73%), Query Frame = 0 Query: 242 EDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWI------QSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKIL--DHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKIL-----------NEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCP 658 ED + G NV I + + N+ + + IK Y++PTP+Q+ AIP RD++ A+TGSGKTAAFL+P++ I Q P ++ + + + P A+I+APTRELA QI +E KF ++ V GG + +Q L GC +++ATPGRL+D+L+ + L +C Y+VLDEADRM+DMGFEP ++KI+ D+MP RQT+MF+AT P ++ LAR +L + +G +G E + Q + + E DKR+ L+ +L NE ++FV +KGAD L L K GF ++HG + Q +RE AL ++G+ ILVAT VA RG+DI +V VIN+D+ +E Y HRIGRTGR G G A SF + +L DL +++V S CP Sbjct: 164 EDIPVEATGDNVPDGINDFMDINMAEIMANNIKLANYSKPTPVQKHAIPAITNGRDLMACAQTGSGKTAAFLVPILNRIFEGGPPQPAPH-SKNKRSKQYPMALILAPTRELATQIFDEAKKFAYRSLVQPCVVYGGANVFEQMMDLDRGCHLLVATPGRLVDMLDRGKISLEQCKYLVLDEADRMLDMGFEPQIRKIVENDNMPPAGQ-----------------------RQTLMFSATFPKEIQMLARDFLANYIFLAVGRVGSTSENITQKIVWVDELDKRSFLLDLLEAAGLAKGPAGNED-SSLTLVFVETRKGADQLDEYLYKEGFPVTSIHGDRTQREREDALRRFRSGNTPILVATAVAARGLDIPNVKHVINFDLPSDVEEYVHRIGRTGRMGNLGLATSFFNDRNRNLTKDLVELIVES-NQQCP 573
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000010143 (supercontig:LSalAtl2s:LSalAtl2s66:712270:714003:-1 gene:EMLSAG00000010143 transcript:EMLSAT00000010143 description:"augustus_masked-LSalAtl2s66-processed-gene-7.1") HSP 1 Score: 275.404 bits (703), Expect = 6.683e-85 Identity = 162/367 (44.14%), Postives = 222/367 (60.49%), Query Frame = 0 Query: 277 GYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWI--QSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIG-RPVERVEQVVCLMK-ENDKRNRLIKILNEGI-EPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDD 638 G+ P+PIQ QA P L+ D+IG+A+TG+GKT AFLLP + I QS+P+ R GP ++++PTRELA QI +E K+ GI++V V GG ++ Q + G +IVIATPGRL D++ES + + TY+VLDEADRM+DMGFEP ++KIL + +PD RQTVM +AT PP V RLA Y++ P V IGS+ V V Q + +++ E +K +RL+ N E IIF+++K D + L G + ++HGG+ Q RE AL K G IL+ATDVA RGID++D+S VIN+D S+E Y HRIGR+GRAGK G +ISF+T D Sbjct: 8 GFKNPSPIQCQAWPYLLKGLDLIGIAQTGTGKTLAFLLPSFIHIDSQSIPREKR-----GGPNVLVLSPTRELALQIADEVKKYEYR-GIKSVCVYGGGDRKAQVKVVTQGVQIVIATPGRLNDLIESGCIAVESITYLVLDEADRMLDMGFEPQIRKIL-----LDVRPD--------------------RQTVMTSATWPPGVRRLASNYMKDPITVSIGSLDLAAVHSVTQKIFVVESEEEKDDRLLDFFNNMTPEDKAIIFMSKKAKVDDYSSSLCLAGVDCQSIHGGRDQMDREQALLDFKLGHVRILIATDVASRGIDVEDISHVINFDFPNSMEEYVHRIGRSGRAGKKGSSISFMTYRD 343
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000001805 (supercontig:LSalAtl2s:LSalAtl2s1306:97666:99668:-1 gene:EMLSAG00000001805 transcript:EMLSAT00000001805 description:"maker-LSalAtl2s1306-augustus-gene-0.42") HSP 1 Score: 271.166 bits (692), Expect = 3.191e-82 Identity = 160/403 (39.70%), Postives = 226/403 (56.08%), Query Frame = 0 Query: 256 PIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPK--ITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMG-CEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDH--MPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPP---IIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFV-TQDDAHLFYDLKQML 649 PI + + + + I YT PTP+Q+ A+PI L D+I A+TGSGKTA FLLP+ I SL K I+ P +I+ PTREL QI +E K+ A + I + GG S E + L +I+ ATPGRLID+L ++ ++V+DEADRM++MGF + ++++H MP T RQT++F+AT PP ++ LA YL+ + +G +G E +EQV+ +K+ +K +L++ L E P I+IF +K+G D LA L A ++HG + QEQRE AL K G K ILVAT+VA RG+DI VSLVINYD+ + I +Y HRIGR+GR G SGK+ISF ++ D L DL +L Sbjct: 162 PINLFRDTPFTSILQDNIARCSYTRPTPVQKHAVPIILMKHDLISCAQTGSGKTAXFLLPI---IHSLHKKRISSNSSDKATPRTLILGPTRELVVQINDEARKYCAKMNIDCRVIYGGSSTESSKYILLNNRVDILSATPGRLIDMLGKEHISFENIEFLVIDEADRMLEMGFRESIDEVVNHFTMPGTTK-----------------------RQTLLFSATFPPEIQILASEYLKDYLFLKVGVVGGASEDIEQVIVQVKDYEKMTKLLETLKENEVNPETKILIFARKKRGVDFLATRLCLDKHPATSIHGDRFQEQREEALRDFKRGSKPILVATEVASRGLDIPKVSLVINYDLPQDISTYVHRIGRSGRVGNSGKSISFYESEFDRPLAKDLVNVL 538
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000011452 (supercontig:LSalAtl2s:LSalAtl2s790:154718:161369:1 gene:EMLSAG00000011452 transcript:EMLSAT00000011452 description:"maker-LSalAtl2s790-augustus-gene-1.30") HSP 1 Score: 271.166 bits (692), Expect = 1.118e-80 Identity = 163/417 (39.09%), Postives = 227/417 (54.44%), Query Frame = 0 Query: 240 FREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKR-----NRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDD----AHLFYDLKQ 647 ++ I I G + P+ + + +L+ I+ +T+PTPIQ IP+ L RD IG+A+TGSGKTA FL P+++ IQ + E GP A+I+ PTRELA QI E KFG + V GG SK +Q G EI IATPGR+ID+++ L R TY+VLDEADRM DMGFE V+ I DH+ +PD RQT++F+AT VE+LAR L P V GSIG E V Q+V ++++ + L++ + G ++IFV +K + LA+ L+ F +HG Q R + K ILVATDVA RG+DI + V+NYD+A+ I+++THRIGRTGRAG G A + VT+ D H+ +L+Q Sbjct: 258 LQQKLGIKISGVSPPKPVTSFGHFGFDEVLLKSIRKSEFTQPTPIQSIGIPVCLSGRDAIGIAKTGSGKTATFLWPIIIHIQHQRPLLNGE----GPIALILVPTRELALQIYTEAKKFGKVYDLNAVCAYGGGSKWEQSKCFESGAEIAIATPGRMIDMIKMKVTNLQRVTYLVLDEADRMFDMGFEAQVRSICDHV-----RPD--------------------RQTLLFSATFKKKVEKLARDVLTDPIKVVQGSIGEASEDVTQIVKVLEKGGYKWEWVLQNLVEFTSAG---SVLIFVTKKLNCEELAQNLKLKEFECELIHGDLNQHVRNEIIYKFKKKQFPILVATDVAARGLDIPHIRTVLNYDIARDIDTHTHRIGRTGRAGIKGTAYTLVTEKDKEFAGHIVRNLEQ 642
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000002458 (supercontig:LSalAtl2s:LSalAtl2s1472:18624:24320:1 gene:EMLSAG00000002458 transcript:EMLSAT00000002458 description:"maker-LSalAtl2s1472-snap-gene-0.14") HSP 1 Score: 273.092 bits (697), Expect = 1.014e-78 Identity = 158/429 (36.83%), Postives = 238/429 (55.48%), Query Frame = 0 Query: 245 NISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWI----QSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLG------IRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQ-DDAHLFYDLKQMLVSSPVSHCPPELS 662 +I ++G N PP++ + + P I++ +K G PT IQ Q IP L RD+IG+A TGSGK+ F+LP++++ + LP + ++GPY +I+ P+RELA+QI E + + L IR+ IGG S + ++ G IV+ATPGRL+D+L L L C Y+ LDEADRMIDMGFE DV+ I + FK + RQT++F+ATMP ++ A++ L +P V +G G + Q V +K K +I++L + PP++IF +K+ D + L G +A ++HGGK Q+ R A++ + KD+LVATDVA +G+D + VINYDM IE+Y HRIGRTGR G A + + + D ++ DLK +L+ + PP L+ Sbjct: 960 SIIVEGWNPPPPLKSFQDMKFPLPIIKALKEKGIERPTSIQMQGIPAVLSGRDLIGIAYTGSGKSLVFILPIVMFCLEQEKRLPFV-----QNEGPYGLIVVPSRELAKQIHESIYSYFSYLKKNSFPEIRSCLAIGGTSSSETMDVVKKGVHIVVATPGRLMDLLNKKMLNLEICRYLCLDEADRMIDMGFEEDVRTIFSY----------------------FKGQ---RQTLLFSATMPKKIQNFAQSALVKPITVNVGRAGAASMNIIQEVEYVKSEAKVVHIIEMLKKT-PPPVLIFAERKQDVDAIHEYLLLKGVSAVSVHGGKDQDDRSKAVTDFRNLRKDVLVATDVASKGLDFPCIQHVINYDMPDDIENYVHRIGRTGRGNFKGYATTMINKLVDENVLLDLKHLLIEAK-QKVPPFLA 1356
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000000846 (supercontig:LSalAtl2s:LSalAtl2s1142:195200:196664:-1 gene:EMLSAG00000000846 transcript:EMLSAT00000000846 description:"augustus_masked-LSalAtl2s1142-processed-gene-1.9") HSP 1 Score: 251.136 bits (640), Expect = 3.601e-76 Identity = 149/391 (38.11%), Postives = 222/391 (56.78%), Query Frame = 0 Query: 260 WDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLY-LVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQML 649 + + L + + E + +G+ P+ IQ++AIP+ L RDIIG+AETGSGKTAAF LP++ QSL LE + +A+++ PTRELA QI E+ K G S+G++ V ++GG+ Q L I+IATPGRLID +E+ L Y+++DEADR+++M FE +V KIL +P + + R+ ++F+ATM V +L R LR P V + S + V+++ Q + K L+ I+NE IIF + G LA L +GF A L+G Q +R +L+ K + IL+ATDVA RG+DI V +VINYD+ + Y HR+GRT RAG+SG+AI+FV Q D L+ ++ ++ Sbjct: 26 FSDLGLTEVLCEACESLGWKTPSKIQKEAIPVALTGRDIIGLAETGSGKTAAFALPVL---QSL-----LEKPQRF-FALVLTPTRELAYQISEQFEKLGKSIGVKCVVLVGGMDMVSQALVLGKKPHIIIATPGRLIDHMENTKGFDLRSLKYLIMDEADRILNMDFEIEVDKILSALP-----------------------RGEGRKNMLFSATMTKKVAKLQRASLRDPVRVEVSSKYQTVDKLLQYYLFIPLKYKEMYLVHIINELAGNSFIIFSSTCSGTLKLALLLRNLGFTAIPLNGQMSQNKRLASLNKFKNKSRSILIATDVASRGLDIPHVDVVINYDIPTHSKDYIHRVGRTARAGRSGRAITFVCQYDVELYQRIETLI 384
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Match: EMLSAG00000004918 (supercontig:LSalAtl2s:LSalAtl2s259:1039310:1040989:-1 gene:EMLSAG00000004918 transcript:EMLSAT00000004918 description:"maker-LSalAtl2s259-augustus-gene-10.16") HSP 1 Score: 252.677 bits (644), Expect = 5.279e-76 Identity = 166/470 (35.32%), Postives = 252/470 (53.62%), Query Frame = 0 Query: 198 VEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGG---NVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPV-ERVEQVVCLMKENDKRNRLIKILNEGIEPP--IIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPEL 661 ++ D + K+ R + + + + K ++ + + + + ++I + G ++ P + D ++L + L+ K + PTPIQ P+ RD+IG+AETGSGKT AF +P + I S K ++ + P +I+APTRELA Q + G +G +++ V GG++K Q L+ G EI++ATPGRL+D+ E + LS +Y+VLDEADRM+D GFE D+++IL +K RQT +F+AT P S+ +LA +L+ P V IGS + V Q+V ++ E + ++ +LN+ + I+IFV K+ AD L L K +N T+HG K Q+ R A+ K+G IL+ATDVA RG+DI DV V+NY +IE Y HRIGRTGRAGKSG A +F D +L +L S PPE+ Sbjct: 47 MDSDSTSIKKTKLSREDGDEIFKKCFYDGKGDSKLSSSEIKDYFKKHSIHVYGQGSESIVPVLSFDDMSSLGKKCLKCCKS--FKAPTPIQSMTWPVVASGRDVIGIAETGSGKTLAFSVPALAHI-SERKQRPVKGVNSMPIMLIVAPTRELAMQSQVVLESAGKEIGFKSLCVYGGVNKYAQRQSLKSGVEILVATPGRLLDLAEEGCVDLSGVSYVVLDEADRMLDQGFEQDIRRILGQT-------------------------HKERQTCLFSATWPDSIRKLAHEFLKSPIKVTIGSEDLAAGKTVTQIVEVVDERSRDGKIKGLLNKYHKKKNRILIFVLYKREADRLWNSL-KHEWNCTTIHGDKSQDARIQAVENFKSGKIPILIATDVAARGLDIPDVEYVLNYSFPLTIEDYVHRIGRTGRAGKSGIAHTFFHLGDKARAGELVNVLKESN-QDVPPEM 486
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Match: gi|152032663|sp|A4RK80.1|PRP28_MAGO7 (RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28) HSP 1 Score: 506.138 bits (1302), Expect = 2.472e-170 Identity = 292/707 (41.30%), Postives = 412/707 (58.27%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRS---------------------------GGGTKEVEGVEKEREAIKERYLG------GLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGG-LSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVE-QVVCLMKENDKRNRLIKILNE-GIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKP 671 L LEE+L + KA +A AKP+F+ + +R K+ E + QQ + + R + + R++L ++R +R + R R+ G D S G++ E V++E++ + ERY G K+ RR ++KF FDWD +DTS+ + H+ R G + + RR +D RL W +KE MT RDWR+F+ + I KG N+ P+R W+E+NLP + + IK VGYTEPTP+QR AIPI LQ RD+IG+++TGSGKTAAF+LP++ +I+ LP + + + GPYA+I+APTRELA QI+ E KF +G V +IG + E+ F LR G EI++ATPGRL+D LE LVLS+C+Y+VLDEADRM+D GFE + KIL +P +N KPD AED I+++ +YRQTVM++ATMPPSVER+A+ YL+ PA+V IG+IG V+ VE Q + ++ E+++RN+L +LN G +I+FVN K D +A+ L+ F+A TLHG K Q+QRE AL + G ++LVATDVA RG+DI DVSLVIN++MA +IE YTHRIGRTGRAGK G AI+F +D + Y LKQ++ S +S PP L +HPE+Q+KP Sbjct: 4 LDLEEILKKHKAAKAEAAKPRFIPRGQRKKMEEEKKLKVEEEQKRQQEELQKTRSELQK-AREELAGLQRVRRQEQSRSRESDHSVPTGPRAMRSYDDDSFNGNGNGSNSNRNNNNNQRDRQDASTKTNGSRTAEEVQEEKKYL-ERYTGPPAKVSTFSANKKRRRTTDQKFNFDWDPKDDTSQPWRYEETGAHE-----RSANGATE----------------QVRRKKATRDYNDPRLVP--------------WQDKELSQMTTRDWRLFKVNLEIVTKGNNIPNPMRFWEESNLPHVLKDTIKQVGYTEPTPVQRAAIPIALQCRDLIGISKTGSGKTAAFVLPMLSYIEPLPPLNEVTKTE-GPYALILAPTRELATQIQAEVIKFATRMGFTVVCLIGNKRTIEEDAFALRNGAEIIVATPGRLVDCLERHLLVLSQCSYVVLDEADRMVDGGFEDSIHKILAALPPSNGKPDDRDAEDPNIMSKFLTPNLRYRQTVMYSATMPPSVERIAKNYLKHPAMVTIGTIGEAVDTVEQQAMWVVSEDERRNKLRAMLNTYGTGKLVIVFVNTKSNCDAVAKDLKSSSFSAVTLHGNKTQDQREAALQSFRDGRTNVLVATDVAARGLDIPDVSLVINFNMAGTIEVYTHRIGRTGRAGKEGMAITFCGPEDHGVLYHLKQIMSKSQMSKVPPWLKDHPEAQSKP 672
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Match: gi|74659615|sp|Q6C024.1|PRP28_YARLI (RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28) HSP 1 Score: 493.041 bits (1268), Expect = 1.570e-166 Identity = 255/537 (47.49%), Postives = 347/537 (64.62%), Query Frame = 0 Query: 138 KFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGG-NVAPPIRQWDEAN-LPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNR-LIKILNE-GIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNK 670 KF FDW A +DTSK Y P Y+ G G V + +K+ +D HWS+K E MT RDWRIF+EDY+I KGG N+ P+R W+E +P + + I +GY EPTPIQR AIPI L RD+IGVAETGSGKTA+FL+PL+ +I LPK+ + GPY +I+APTRELA QI++E KF A LG + V+V+GG S ++Q ++ G E+++ATPGRL+DV++ LVL++C Y+V+DEADRM+DMGFE VQK+L +P +NAKPDSD AE+ + S +YRQT+M+TATMP ++E+LA+ YLRRP IV IGS G+ V Q+V + ++KR R L+ I+++ PPI++F+N K+ + ++ L G+ A +HGGK QEQRE A+ LK G D+LVATDVAGRG+DI +VSLV+N+ MA +IESYTHRIGRTGRAGK G A++F+ Q+D + ++LKQM+ S S ELS HP ++ K Sbjct: 86 KFSFDWSAADDTSKAYQPSYSID--------SGDGQVP-------------------------------------KRQKRDLEDAHWSDKPVESMTSRDWRIFKEDYSIVTKGGGNIPNPLRSWNECKEIPGIVRDTISRMGYKEPTPIQRAAIPIALGIRDVIGVAETGSGKTASFLIPLISYICELPKLDERSKVN-GPYGLILAPTRELAMQIKDEAVKFCAPLGFKVVSVVGGYSAQEQALAVQEGAELIVATPGRLLDVIDRRLLVLNQCCYVVMDEADRMVDMGFEEQVQKVLASLPSSNAKPDSDEAENLAAV-----STRRYRQTMMYTATMPVAIEKLAKKYLRRPGIVTIGSAGQAGSTVTQLVEFLNTDEKRKRRLLDIISKRQYRPPIVVFLNYKRDCEAVSDALVAAGWRTAIIHGGKQQEQREQAVQHLKRGAVDVLVATDVAGRGLDIPNVSLVVNFQMANNIESYTHRIGRTGRAGKRGTAVTFLGQEDDDVLFELKQMISRSEASPNNQELSRHPAARMK 571
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Match: gi|116256765|sp|Q9FZ92.2|RH44_ARATH (PUTATIVE PSEUDOGENE: RecName: Full=Putative DEAD-box ATP-dependent RNA helicase 44) HSP 1 Score: 476.863 bits (1226), Expect = 1.364e-159 Identity = 285/662 (43.05%), Postives = 394/662 (59.52%), Query Frame = 0 Query: 18 AKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKERE--AIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDT-SKDYNPIYADKHQIQ-FFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNE-GIEPPIIIFVNQKKGADVLARGLEKMG-FNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGS 673 KP FL+K R AL++ Q + A RD+++ + R D + + R ++RE R R DH R+R + +R +++E V++E+E A+KE+YLG K KKR+ + F FDW+ EDT S + N +Y + H+ Q FGRG G+D + QKK L K EK++ +D+HWSEK+ E M ERDWRIF+ED+NIS +G + P+R W+E IP+GL+ RD+IG++ TGSGKTAAF+LP++ +I LP + R E+ +GPYA++M PTRELA QIEEET KF LG + V++ G S E Q KL GCEIVIATPGRL+D LE Y+VL++C Y+VLDEADRMIDM FEP V ++LD MP +N KP+ + E YR T MF+ATM SVERLAR +LR P +V +IG + + Q V + KE+DK +RL K++++ G + I+FVN + D + + LEK+G TLH GK QEQR+++L K ++LV TDV GRG+DI D++ VINYDM +++ YTHRIGRTGRAGK+G A +F+T +D +FY LKQ L + S PPEL+ H S+ KPG+ Sbjct: 24 TKPVFLTKAHRKELALKRCQDEI-ADRDRRSIVQISRSNSDNDDGNRPRDVKRE----RHRSHDHDRNRESDREFRER---EVKARVEKLEMVKREKEINAMKEQYLGTTKPKKRVIMKPSKNFRFDWENTEDTLSGEMNVLYQNPHEAQPLFGRGCRAGIDRREQKK-------------------------LMTGKHEREKREEEDKHWSEKKLEEMNERDWRIFKEDFNISYRGSKIPHPMRNWEET-------------------------IPLGLEQRDVIGISATGSGKTAAFVLPMLAYISRLPPM-REENQTEGPYALVMVPTRELAHQIEEETVKFSRYLGFKAVSITGWESIEKQALKLSQGCEIVIATPGRLLDCLERRYVVLNQCNYLVLDEADRMIDMDFEPQVSEVLDVMPCSNLKPEKEDEELEEKKI--------YRTTYMFSATMLLSVERLARKFLRNPVVV---TIGETTKFITQQVIMTKESDKFSRLKKLIDDLGDDKTAIVFVNTRNKVDYIVKNLEKVGRCRVTTLHAGKSQEQRDYSLEEFKKKRFNVLVTTDVLGRGLDILDLAQVINYDMPNTMDLYTHRIGRTGRAGKTGVATTFLTLEDKDVFYGLKQKL-NECNSLVPPELARHEASKFKPGT 614
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Match: gi|158514818|sp|A3LNL1.2|PRP28_PICST (RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28) HSP 1 Score: 389.423 bits (999), Expect = 1.732e-127 Identity = 204/468 (43.59%), Postives = 296/468 (63.25%), Query Frame = 0 Query: 223 HWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEII-KGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKIT-----RLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMK---------ENDKRNRLIKILN----EGIEPPIIIFVNQKKGADVLARGLEKMGF-NAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNK 670 HWSEK + MT RDWRIFREDY I+ KGG++ P+R W+EA++P ++L II + Y EPTPIQR AIP+ L RD++G+AETGSGKT AFL+PL+ +I + K + E P +I+APTRELAQQI +E KFG LG+ V++IGG E+ +R G +V+ATPGRL+D LE + L +C Y+++DEADRMIDMGFE +Q IL ++P T+ +STI + F K R T+MFTAT+ P +E++ + +L +P +YIG G ++ + Q + ++ + ++L++I+ E + IIIF N K+ D+L+ LEK GF + +HG K QE RE A+S ++ + IL+ATDVA RGID+ +VSLV+N+ M++ + Y HRIGRTGRAG G++ +F+ D+ +F DLK+ LV+ CP L H +Q++ Sbjct: 21 HWSEKSLDQMTARDWRIFREDYGITSKGGDIDNPLRTWNEASIPSKLLSIIVDKLEYLEPTPIQRAAIPLALNQRDVVGIAETGSGKTLAFLIPLLSYILNTDKNYLEYEHQQEQNYNKPLGLILAPTRELAQQITKEAQKFGDRLGLNVVSIIGGHQYEETVHSIRTGVHVVVATPGRLVDSLERNIIGLDKCYYLIMDEADRMIDMGFEKALQSILSYVPSTDRL-------NSTIDSMIFHIKK--RITLMFTATISPPIEKITKNFLIKPGYLYIGGAGEALDHIVQNFEYLGSATGGSEDFDSKRFDKLVRIIQQHSRESRQFSIIIFANYKRVCDLLSLELEKNGFRDNVVIHGSKTQELREKAISSFRSHESRILIATDVAARGIDVPNVSLVVNFQMSRKFDEYVHRIGRTGRAGNRGESYTFIDDSDSDVFIDLKKFLVNGG-KKCPDWLIKHASTQSQ 478
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Match: gi|218511820|sp|Q6BLU9.2|PRP28_DEBHA (RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28) HSP 1 Score: 384.8 bits (987), Expect = 2.129e-124 Identity = 210/470 (44.68%), Postives = 284/470 (60.43%), Query Frame = 0 Query: 221 DRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEI-IKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRL-----EDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLM---KEND------KRNRLIKIL----NEGIEPPIIIFVNQKKGADVLARGLEKMGFNAAT-LHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNK 670 D HWSEK+ + MT RDWRIF+EDYNI+ KGG++ P+R W E+ LP ++L I IK +GY PTPIQR +IP+ L RDI+G+AETGSGKT AFLLPL +I S+ L E P +I+APTRELA QI +E FG L + V +IGG E+ +R G IV+ATPGRLID LE + LS C + +DEAD+MIDMGFE +Q IL+++P + ++TI + F K R T+MFTAT+ P +E++ + YL +P ++IG++G V+ + Q + +D K ++L IL +E IIIF N KK + LA L + GF+ T +HG K QE RE A+ + G IL+ATDVA RGIDI +VSLV+NY M K + Y HRIGRTGRAG G + +F+ D+ +F DLK+ L CP L H +Q++ Sbjct: 117 DMHWSEKQIDDMTTRDWRIFKEDYNITSKGGDIENPLRCWAESKLPAKLLNILIKNLGYDSPTPIQRASIPLALNGRDIVGIAETGSGKTLAFLLPLFSYILSVDSNYLLYEHQQESNFNKPLGLILAPTRELALQITKEAKLFGDKLNLNVVTIIGGHQYEETVHSVRNGVHIVVATPGRLIDSLERGIINLSNCYFFTMDEADKMIDMGFEKSLQSILNYLPASEKL-------ETTIDGKIFNIKK--RITLMFTATISPPIEKITKNYLMKPGYLFIGNVGEAVDNINQQFEYFGARQSSDEILDPKKLDKLFSILRFHKDENRNYSIIIFANFKKACEELAYELSRKGFSDNTVIHGSKSQEARERAIDSFREGKDKILIATDVAARGIDIPNVSLVVNYQMTKKFDEYIHRIGRTGRAGNKGTSCTFIDDGDSEVFLDLKKFLNKG-KKKCPEWLLKHSSTQSQ 576
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Match: gi|1070611695|ref|XP_018403738.1| (PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform X1 [Cyphomyrmex costatus]) HSP 1 Score: 989.564 bits (2557), Expect = 0.000e+0 Identity = 482/687 (70.16%), Postives = 568/687 (82.68%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIFV 687 LSLEELLA++KAEE A+AKPKFLSKEER A AL KRQ VEA+R QQ +ER D + ERE D R+R++ R R D+ EKE EAIKERYLG +K+K+R+RRLN+RKFVFDWD EDTS DYN IY ++HQ+QFFGRG + G+DIK+QK+ Q +FYGE+LE RRT+ EK+QEK RLKK+KR+EEKQKWDDRHWSEK MTERDWRIFREDYNI+IKGG + PIR W E+ P EIL+II VGY + TPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PL++WI SLPKI RLE+AD+GPY+II+APTRELAQQIEEETNKFG LGIRTV V+GGLS+E+QGF+LRMGCEIVIATPGRLIDVLE+ YLVL++CTYIVLDEADRMIDMGFEPDVQKIL++MPVTN KPD++ AE+ L N+ +K KYRQTVMFTATMPP+VERLARTYLRRPA+VYIGS+G+P ER EQ+V +M E DKR +L++IL+ G+EPP+IIFVNQKKGADVLARGLEK+G+NA TLHGGKGQEQRE+AL+ LK+G KDILVATDVAGRGIDIKDVS+VINYDMAK+IE YTHRIGRTGRAGK+G AISF T+DD+HLFYDLKQ +++SP+S CPPEL NHP++Q+KPG+ KKR++EKIF Sbjct: 125 LSLEELLAKKKAEEEARAKPKFLSKEERTALALEKRQQEVEAIRRQQEEERKLLFHSDNTSK------EREWDDRDSRRRENQRSRDEDIKDKDK---------------EKEVEAIKERYLGLVKKKRRVRRLNDRKFVFDWDTSEDTSVDYNSIYKERHQVQFFGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRLKKVKRKEEKQKWDDRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGKPTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGT-VVTKKRREEKIFA 789
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Match: gi|815806104|ref|XP_012223816.1| (PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform X1 [Linepithema humile]) HSP 1 Score: 986.867 bits (2550), Expect = 0.000e+0 Identity = 479/687 (69.72%), Postives = 567/687 (82.53%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIFV 687 LSLEELL+++KAEE A+AKPKFL+KEER A AL KRQ V+A+R QQ +ER D + ERE D R+R+ R R D+ EKE EAIKERYLG +K+K+R+RRLN+RKFVFDWD EDTS DYN IY ++HQ+QFFGRG + G+DIK+QK+ Q +FYGE+LE RRT+ EK+QEK RLKK+KR+EEKQKWDDRHWSEK MTERDWRIFREDYNI+IKGG + PIR W E+ P EIL+II VGY + TPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PL++WI SLPKI RLE+AD+GPY+II+APTRELAQQIEEETNKFG LGIRTV V+GGLS+E+QGF+LRMGCEIVIATPGRLIDVLE+ YLVL++CTYIVLDEADRMIDMGFEPDVQKIL++MPVTN KPD++ AE+ L N+ +K KYRQTVMFTATMPP+VERLARTYLRRPA+VYIGS+G+P ER EQ+V +M E DKR +L++IL+ G+EPP+IIFVNQKKGADVLARGLEK+G+NA TLHGGKGQEQRE+AL+ LK+G KDILVATDVAGRGIDIKDVS+VINYDMAK+IE YTHRIGRTGRAGK+G AISF T+DD+HLFYDLKQ +++SP+S CPPEL NHP++Q+KPG+ KKR++EKIF Sbjct: 121 LSLEELLSKKKAEEEARAKPKFLTKEERTALALEKRQQEVDAIRKQQEEERKSLFHNDNTSK------EREWDDRDSRRREGQRSREEDIKDKDK---------------EKEVEAIKERYLGLIKKKRRVRRLNDRKFVFDWDTSEDTSVDYNNIYKERHQVQFFGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRLKKVKRKEEKQKWDDRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGKPTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGT-VVTKKRREEKIFA 785
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Match: gi|749779756|ref|XP_011144397.1| (PREDICTED: probable ATP-dependent RNA helicase DDX23 [Harpegnathos saltator]) HSP 1 Score: 986.482 bits (2549), Expect = 0.000e+0 Identity = 480/686 (69.97%), Postives = 566/686 (82.51%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIF 686 LSLEELLA++KAEE A+AKPKFLSKEER A AL KRQ VEA+R QQ +ER D + ERE W + R + RS + + EKE EAIKERYLG +K+K+R+RRLN+RKFVFDWD EDTS DYN IY ++HQ+QFFGRG + G+DIK+QK+ Q +FYGE+LE RRT+ EK+QEK RLKK+KR+EEKQKWDDRHWSEK MTERDWRIFREDYNI+IKGG + PIR W E+ P EIL+II VGY + TPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PL++WI SLPKI RLE+AD+GPY+II+APTRELAQQIEEETNKFG LGIRTV V+GGLS+E+QGF+LRMGCEIVIATPGRLIDVLE+ YLVL++CTYIVLDEADRMIDMGFEPDVQKIL++MPVTN KPD++ AE+ L N+ +K KYRQTVMFTATMPP+VERLARTYLRRPA+VYIGS+G+P ER EQ+V +M E DKR +L++IL+ G+EPP+IIFVNQKKGADVLARGLEK+G+NA TLHGGKGQEQRE+AL+ LK+G KDILVATDVAGRGIDIKDVS+VINYDMAK+IE YTHRIGRTGRAGK+G AISF T+DD+HLFYDLKQ +++SP+S CPPEL NHP++Q+KPG+ KKR++EKIF Sbjct: 127 LSLEELLAKKKAEEEARAKPKFLSKEERAALALEKRQKEVEAIRKQQEEERKSLFHNDNISK------ERE---------------WDDRDSRRRDTQRSREDEIKDKDKEKEVEAIKERYLGLVKKKRRVRRLNDRKFVFDWDTSEDTSVDYNNIYKERHQVQFFGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRLKKVKRKEEKQKWDDRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGKPTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGT-VVTKKRREEKIF 790
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Match: gi|242022378|ref|XP_002431617.1| (pre-mRNA-splicing ATP-dependent RNA helicase prp28, putative [Pediculus humanus corporis] >gi|212516925|gb|EEB18879.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28, putative [Pediculus humanus corporis]) HSP 1 Score: 985.712 bits (2547), Expect = 0.000e+0 Identity = 490/698 (70.20%), Postives = 582/698 (83.38%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGAD----RGSDRSGGGT--------KEVEGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIF 686 LSLEELL+++KAEEAA++KP FLSK+ER AEAL++RQ VE LR +Q +ER KR +F + + Q D ER R R + RG DRS + + ++ EKE EAIKERYLG +K+K+R+RRLN+RKFVFDWDAGEDTS DYNP+Y ++HQ+QFFGRG I G+DIK+QK+ Q +FYGE+LE RRTD EK+QEK RLKK++++EEKQKWDDRHWSEK + MTERDWRIFREDYNI+IKGG + PIR W EA +P EIL+II+ VGYTE TPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PL++WIQSLPKI R+EDAD+GPYAII+APTRELAQQIEEETNKFG LGIRTV V+GGLS+E+QGF+LR+GCEIVIATPGRLIDVLE+ YLVL++CTYIVLDEADRMIDMGFEPDVQKIL++MPVTN KPD++ AED L N+ SK KYRQTVMFTATMPP+VERLARTYLRRPA+VYIGS+G+PVERVEQ+V ++ E DKR +L ++L G+EPP+IIFVNQKKGADVLARGLEK+G+NA TLHGGKGQEQRE+ALS LK G KDILVATDVAGRGIDIKDVS+VINYDMAK+IE YTHRIGRTGRAGK G A+SF T+DD+ LFYDLKQ+++SSP+S CPPEL NHP++Q+KPG+ KKR++EKIF Sbjct: 97 LSLEELLSKKKAEEAARSKPVFLSKQERAAEALQRRQEEVEKLRKKQEEERKKRIEFSKSAQSN------SQNDKSERDRHDDFRRDKDIDRDKDSFRRGKDRSQNDSLSKKADLDESIKDKEKEAEAIKERYLGIVKKKRRVRRLNDRKFVFDWDAGEDTSLDYNPLYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGELLEKRRTDAEKEQEKVRLKKLRKKEEKQKWDDRHWSEKALDEMTERDWRIFREDYNITIKGGKIPDPIRNWKEAKIPQEILDIIERVGYTEATPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLIMWIQSLPKIQRMEDADQGPYAIILAPTRELAQQIEEETNKFGNPLGIRTVVVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEEAEDDKFLLANYNSKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGKPVERVEQIVHIVSEQDKRRKLCELLARGVEPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQREYALSSLKNGTKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKHGIAVSFCTKDDSGLFYDLKQLILSSPISTCPPELLNHPDAQHKPGT-VVTKKRREEKIF 787
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Match: gi|350424960|ref|XP_003493968.1| (probable ATP-dependent RNA helicase DDX23 [Bombus impatiens] >gi|1366136351|ref|XP_024227289.1| probable ATP-dependent RNA helicase DDX23 [Bombus impatiens]) HSP 1 Score: 985.326 bits (2546), Expect = 0.000e+0 Identity = 480/686 (69.97%), Postives = 566/686 (82.51%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIF 686 LSLEELLA++KAEE A+AKPKFL+KEER A AL+KRQ VEA+R QQ D R H E +D +RD RD R + + D+ EKE EAIKERYLG +K+K+R+RRLN+RKFVFDWD EDTS DYN IY ++HQ+QFFGRG G+DIK+QK+ Q +FYGE+LE RRT+ EK+QEK RLKK+KR+EEKQKWDDRHWSEK MTERDWRIFREDYNI+IKGG + PIR W E+ P EIL+II VGY + TPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PL++WI SLPKI RLE+AD+GPY+II+APTRELAQQIEEETNKFG LGIRTV V+GGLS+E+QGF+LRMGCEIVIATPGRLIDVLE+ YLVL++CTYIVLDEADRMIDMGFEPDVQKIL++MPVTN KPD++ AE+ L N+ +K KYRQTVMFTATMPP+VERLARTYLRRPA+VYIGS+G+P ER EQ+V +M E DKR +L++IL+ G+EPP+IIFVNQKKGADVLARGLEK+G+NA TLHGGKGQEQRE+AL+ LK+G KDILVATDVAGRGIDIKDVS+VINYDMAK+IE YTHRIGRTGRAGK+G AISF T+DD+HLFYDLKQ +++SP+S CPPEL NHP++Q+KPG+ KKR++EKIF Sbjct: 122 LSLEELLAKKKAEEEARAKPKFLTKEERTALALQKRQEEVEAIRKQQEDIRKSFHS------------ENVGKDKEWDERDRRRDGQRTREDEIKDKDK-----------EKEVEAIKERYLGLVKKKRRVRRLNDRKFVFDWDTSEDTSVDYNNIYKERHQVQFFGRGNFAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRLKKVKRKEEKQKWDDRHWSEKALHEMTERDWRIFREDYNITIKGGRIPDPIRSWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGKPTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGT-VVTKKRREEKIF 783
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Match: gi|759057674|ref|XP_011338094.1| (PREDICTED: probable ATP-dependent RNA helicase DDX23 [Ooceraea biroi] >gi|759057676|ref|XP_011338095.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Ooceraea biroi] >gi|607360369|gb|EZA54700.1| putative ATP-dependent RNA helicase DDX23 [Ooceraea biroi]) HSP 1 Score: 984.556 bits (2544), Expect = 0.000e+0 Identity = 479/687 (69.72%), Postives = 569/687 (82.82%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIFV 687 LSLEELLA++KAEE A+AKPKFL+KEER A AL+KRQ V+A+R QQ ++ D G+ + E + RD R R+ G RS + + EKE EAIKERYLG +K+K+R+RRLN+RKFVFDWD EDTS DYN IY ++HQ+QFFGRG + G+DIK+QK+ Q +FYGE+LE RRT+ EK+QEK RLKK+KR+EEKQKWDDRHWSEK MTERDWRIFREDYNI+IKGG + PIR W E+ P EIL+II VGY + TPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PL++WI SLPKI RLE+AD+GPY+II+APTRELAQQIEEETNKFG LGIRTV V+GGLS+E+QGF+LRMGCEIVIATPGRLIDVLE+ YLVL++CTYIVLDEADRMIDMGFEPDVQKIL++MPVTN KPD++ AE+ L N+ +K KYRQTVMFTATMPP+VERLARTYLRRPA+VYIGS+G+P ER EQ+V +M E DKR +L++IL+ G+EPP+IIFVNQKKGADVLARGLEK+G+NA TLHGGKGQEQRE+AL+ LK+G KDILVATDVAGRGIDIKDVS+VINYDMAK+IE YTHRIGRTGRAGK+G AISF T+DD+HLFYDLKQ ++SSP+S CPPEL NHP++Q+KPG+ KKR++EKIF Sbjct: 120 LSLEELLAKKKAEEEARAKPKFLTKEERTALALQKRQQEVDAMRKQQEEKCKSLFHNDNAGKDR----EWDDRDSRRRE----------------GPGRSREEEIKDKDKEKEVEAIKERYLGLIKKKRRVRRLNDRKFVFDWDTSEDTSVDYNNIYKERHQVQFFGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRLKKVKRKEEKQKWDDRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGKPTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKAGLAISFCTKDDSHLFYDLKQTILSSPISTCPPELLNHPDAQHKPGT-VVTKKRREEKIFA 785
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Match: gi|1041531621|ref|XP_017302402.1| (PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform X3 [Diaphorina citri]) HSP 1 Score: 983.4 bits (2541), Expect = 0.000e+0 Identity = 491/688 (71.37%), Postives = 579/688 (84.16%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEV-EGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIFV 687 LSLEELLA++KAEE A++KPKFL+KEER AEALRKRQA VE +R + +ER KR +F +E E +R++F R R DR + KE+ + E+E EAIKERYLG +K+K+R+RRLN+RKFVFDWDA EDTS DYN IY ++HQ+QFFGRG I G+DIK+QK+ Q +FYGEMLE RRT+ EK+QEK RLKK+K+REEKQKWDDRHW+EK + MTERDWRIFREDY+I+IKGG V P+R W EA+LP EILEII+ +GY EPTPIQRQAIPIGLQNRDIIGVAETGSGKT AFLLPL+VWIQSLPKI R+EDAD+GPYAIIMAPTRELAQQIEEETNKFG LGIRTV V+GGLS+E+QGF+LR+GCEIVIATPGRLIDVLE+ YLVL++CTYIVLDEADRMIDMGFEPDVQKIL++MPVTN KPD++ AED L N+ SK KYRQTVMFTATMPP+VERLAR+YLRRPA VYIGS+G+P ER+EQ+V ++ E DKR +L+++LN G++ P+IIFVNQKKGADVLA+GLEK+G+NA TLHGGKGQEQRE AL+ LK G KDILVATDVAGRGIDIKDVS+VINYDMAKSIE YTHRIGRTGRAGK G A+SF T+DD+HLFYDLKQM++SSPVS CPPEL NHP++Q+KPG+ KKR++EKIF Sbjct: 127 LSLEELLAKKKAEEEARSKPKFLTKEERAAEALRKRQAEVEEMRKKMEEERKKRQEFTKEA-------------SFESKRENFDARLR----RDREKKKEDPEEKELNKDKEREGEAIKERYLGLVKKKRRVRRLNDRKFVFDWDASEDTSVDYNSIYKERHQVQFFGRGNIAGIDIKAQKRDQSKFYGEMLEKRRTEAEKEQEKVRLKKVKKREEKQKWDDRHWTEKSLDEMTERDWRIFREDYSITIKGGKVPDPVRNWKEASLPTEILEIIEKIGYAEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWIQSLPKIARMEDADQGPYAIIMAPTRELAQQIEEETNKFGTPLGIRTVLVVGGLSREEQGFRLRLGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDTEDAEDENKLLANYNSKKKYRQTVMFTATMPPAVERLARSYLRRPATVYIGSVGKPTERIEQIVYILSEQDKRKKLMEVLNRGVKKPVIIFVNQKKGADVLAKGLEKLGYNACTLHGGKGQEQRELALNSLKGGSKDILVATDVAGRGIDIKDVSMVINYDMAKSIEDYTHRIGRTGRAGKEGLAVSFCTKDDSHLFYDLKQMMISSPVSTCPPELLNHPDAQHKPGTVMVPKKRREEKIFA 797
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Match: gi|1227958004|ref|XP_021924530.1| (probable ATP-dependent RNA helicase DDX23 [Zootermopsis nevadensis] >gi|646723186|gb|KDR23888.1| putative ATP-dependent RNA helicase DDX23 [Zootermopsis nevadensis]) HSP 1 Score: 982.63 bits (2539), Expect = 0.000e+0 Identity = 484/687 (70.45%), Postives = 579/687 (84.28%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIFV 687 LSLEELL +++AEEAA++KPKFLSKEER AEA++KRQ E +R + DE+ +R F +E + + + +D ++R +D FR R + DR D KE KE EAI+ERYLG +K+K+R+RRLN+RKFVFDWDA EDTS DYNP+Y ++HQ+QFFGRG + G+DIK+QK+ Q +FYGE+LE RRT+ EK+QEK RLKK+K++EEKQKWDDRHWSEK K+ MTERDWRIFREDYNI+IKGG + PIR W E+ +P EILEI++ VGYT+ TPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PL++WIQSLPKI R+EDAD+GPY+II+APTRELAQQIEEETNKFG LGIRTV V+GGLS+E+QGF+LRMGCEIVIATPGRLIDVLE+ YLVL++CTYIVLDEADRMIDMGFEPDVQKILD+MPVTN KPD++ AED T L N+ SK KYRQTVMFTATMPP+VERLARTYLRRPA+VYIGS G+P ERVEQVV ++ E DKR +L++IL G+ PP+IIFVNQKKGADVLARGLEK+G+NA TLHGGKGQEQRE+AL+ LK+G KDILVAT+VAGRGIDIKDVS+VINYDMAKSIE YTHRIGRTGRAGK G A+SF T+DD+ LFYDLK ++SSPVS CPPEL NHP++Q+KPG+ KKR++EKIF Sbjct: 106 LSLEELLTKKQAEEAARSKPKFLSKEERAAEAIKKRQQEAEGIRQRMEDEKKRRADFGKEATKAFDDVRKMDKD-QDRDKDSFRRRDK----KDRDEDSQYSKDKE-----KEVEAIRERYLGLIKKKRRVRRLNDRKFVFDWDASEDTSVDYNPLYKERHQVQFFGRGNVAGIDIKAQKRDQSKFYGELLERRRTEAEKEQEKVRLKKLKKKEEKQKWDDRHWSEKSKDEMTERDWRIFREDYNITIKGGRIPDPIRNWKESGIPPEILEIVEKVGYTDATPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLMWIQSLPKIERVEDADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILDYMPVTNLKPDTEDAEDETKLLANYNSKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSAGKPTERVEQVVYILSEADKRRKLLEILGRGVTPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQREYALASLKSGTKDILVATNVAGRGIDIKDVSMVINYDMAKSIEEYTHRIGRTGRAGKHGMAVSFCTKDDSELFYDLKHTILSSPVSTCPPELLNHPDAQHKPGT-VVTKKRREEKIFA 781
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Match: gi|1153812312|ref|XP_020281936.1| (probable ATP-dependent RNA helicase DDX23 [Pseudomyrmex gracilis]) HSP 1 Score: 982.245 bits (2538), Expect = 0.000e+0 Identity = 476/686 (69.39%), Postives = 569/686 (82.94%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIF 686 LSLEELLA++KAEE A+AKPKFL+KEER A AL KRQ VEA+R QQ +ER + F + +++ +RD + + D +D+ + EKE EAIKERYLG +K+K+R+RRLN+RKFVFDWD EDTS DYN IY ++HQ+QFFGRG + G+DIK+QK+ Q +FYGE+LE RRT+ EK+QEK RLKK+KR+EEKQKWDDRHWSEK MTERDWRIFREDYNI+IKGG + PIR W E+ P EIL+II VGY + TPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PL++WI SLPKI RLE+AD+GPY+II+APTRELAQQIEEETNKFG LGIRTV V+GGLS+E+QGF+LRMGCEIVIATPGRLIDVLE+ YLVL++CTYIVLDEADRMIDMGFEPDVQKIL++MPVTN KPD++ AE+ L N+ +K KYRQTVMFTATMPP+VERLARTYLRRPA+VYIGS+G+P ER EQ+V +M E DKR +L++IL+ G+EPP+IIFVNQKKGADVLARGLEK+G+NA TLHGGKGQEQRE+AL+ LK+G KDILVATDVAGRGIDIKDVS+VINYDMAK+IE YTHRIGRTGRAGK+G AISF T+DD+HLFYDLKQ +++SP+S CPPEL NHP++Q+KPG+ KKR++EKIF Sbjct: 119 LSLEELLAKKKAEEEARAKPKFLTKEERAALALEKRQQEVEAIRKQQEEER--KLLFHSDNKERDWDDRDRRRDVQRSREDEIKDKDK----------------------EKEVEAIKERYLGLVKKKRRVRRLNDRKFVFDWDTSEDTSVDYNSIYKERHQVQFFGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRLKKVKRKEEKQKWDDRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGKPTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQREYALASLKSGTKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGT-VVTKKRREEKIF 779
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Match: gi|1070611697|ref|XP_018403740.1| (PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform X2 [Cyphomyrmex costatus]) HSP 1 Score: 981.86 bits (2537), Expect = 0.000e+0 Identity = 475/687 (69.14%), Postives = 567/687 (82.53%), Query Frame = 0 Query: 1 LSLEELLAQQKAEEAAKAKPKFLSKEERVAEALRKRQAHVEALRDQQADERTKRHQFDREGRQQLRAIEREQRDPRERQRDHFRDRWRGKGGADRGSDRSGGGTKEVEGVEKEREAIKERYLGGLKRKKRIRRLNERKFVFDWDAGEDTSKDYNPIYADKHQIQFFGRGGIGGVDIKSQKKTQGQFYGEMLETRRTDVEKDQEKERLKKMKRREEKQKWDDRHWSEKEKEGMTERDWRIFREDYNISIKGGNVAPPIRQWDEANLPDEILEIIKGVGYTEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLLPLMVWIQSLPKITRLEDADKGPYAIIMAPTRELAQQIEEETNKFGASLGIRTVAVIGGLSKEDQGFKLRMGCEIVIATPGRLIDVLESLYLVLSRCTYIVLDEADRMIDMGFEPDVQKILDHMPVTNAKPDSDIAEDSTILAENFKSKNKYRQTVMFTATMPPSVERLARTYLRRPAIVYIGSIGRPVERVEQVVCLMKENDKRNRLIKILNEGIEPPIIIFVNQKKGADVLARGLEKMGFNAATLHGGKGQEQREHALSGLKAGDKDILVATDVAGRGIDIKDVSLVINYDMAKSIESYTHRIGRTGRAGKSGKAISFVTQDDAHLFYDLKQMLVSSPVSHCPPELSNHPESQNKPGSGAPQKKRKDEKIFV 687 LSLEELLA++KAEE A+AKPKFLSKEER A AL KRQ VEA+R QQ +ER D +++ +R+ + + + +D+ + EKE EAIKERYLG +K+K+R+RRLN+RKFVFDWD EDTS DYN IY ++HQ+QFFGRG + G+DIK+QK+ Q +FYGE+LE RRT+ EK+QEK RLKK+KR+EEKQKWDDRHWSEK MTERDWRIFREDYNI+IKGG + PIR W E+ P EIL+II VGY + TPIQRQAIPIGLQNRDIIGVAETGSGKT AFL+PL++WI SLPKI RLE+AD+GPY+II+APTRELAQQIEEETNKFG LGIRTV V+GGLS+E+QGF+LRMGCEIVIATPGRLIDVLE+ YLVL++CTYIVLDEADRMIDMGFEPDVQKIL++MPVTN KPD++ AE+ L N+ +K KYRQTVMFTATMPP+VERLARTYLRRPA+VYIGS+G+P ER EQ+V +M E DKR +L++IL+ G+EPP+IIFVNQKKGADVLARGLEK+G+NA TLHGGKGQEQRE+AL+ LK+G KDILVATDVAGRGIDIKDVS+VINYDMAK+IE YTHRIGRTGRAGK+G AISF T+DD+HLFYDLKQ +++SP+S CPPEL NHP++Q+KPG+ KKR++EKIF Sbjct: 125 LSLEELLAKKKAEEEARAKPKFLSKEERTALALEKRQQEVEAIRRQQEEERKLLFHSDNTSKEREWDDRDRRRENQRSRDEDIKDKDK----------------------EKEVEAIKERYLGLVKKKRRVRRLNDRKFVFDWDTSEDTSVDYNSIYKERHQVQFFGRGNLAGIDIKAQKRDQSKFYGELLEKRRTEAEKEQEKMRLKKVKRKEEKQKWDDRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSWKESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSLPKIERLEEADQGPYSIILAPTRELAQQIEEETNKFGQPLGIRTVVVVGGLSREEQGFRLRMGCEIVIATPGRLIDVLENRYLVLNQCTYIVLDEADRMIDMGFEPDVQKILEYMPVTNLKPDNEDAENEEKLLANYNTKKKYRQTVMFTATMPPAVERLARTYLRRPAVVYIGSVGKPTERTEQIVHIMGEADKRKKLMEILSRGVEPPVIIFVNQKKGADVLARGLEKLGYNACTLHGGKGQEQREYALASLKSGSKDILVATDVAGRGIDIKDVSMVINYDMAKTIEDYTHRIGRTGRAGKAGLAISFCTKDDSHLFYDLKQTILASPISTCPPELLNHPDAQHKPGT-VVTKKRREEKIFA 788 The following BLAST results are available for this feature:
BLAST of pre-mrna-splicing atp-dependent rna helicase vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of pre-mrna-splicing atp-dependent rna helicase vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of pre-mrna-splicing atp-dependent rna helicase vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold10_size831480:35444..39216- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold10_size831480-processed-gene-0.11 ID=snap_masked-scaffold10_size831480-processed-gene-0.11|Name=pre-mrna-splicing atp-dependent rna helicase|organism=Tigriopus kingsejongensis|type=gene|length=3773bp|location=Sequence derived from alignment at scaffold10_size831480:35444..39216- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'pre-mrna-splicing atp-dependent rna helicase' has the following synonyms
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