abc transporter, snap_masked-scaffold11167_size2062-processed-gene-0.0 (gene) Tigriopus kingsejongensis

Overview


Name	abc transporter
Unique Name	snap_masked-scaffold11167_size2062-processed-gene-0.0
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18")

HSP 1 Score: 231.491 bits (589), Expect = 3.251e-67
Identity = 160/500 (32.00%), Postives = 272/500 (54.40%), Query Frame = 0

Query:  143 VGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQ----DGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLL----LSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDAN-VRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELP--PIDGRLELSGVTFGYSD--DEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVG-TVKLDGHDLRAVTVHSLR-SQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAM 627
            +GE +   LR  +F+ +  Q + FF   K G +++R+++D+      F+     GL + A QA   +V    M+ +SP + + + VIV P ++L    +  + +  S++  A V    A+      E ++ +R +            ++  V+  RD N      +G   G +N  +  I    +   GG ++ D  L+ G+L +FL+ +      I Q+  L+    +G A+ ++I   +   P ++      ++P     G +E   +TF Y    ++ VL D  L I P +T+A+VG +G GK+T+A L+ RFYD   G ++++DG ++R +    LR S +G + QEP LF  ++ +N+ + RP+AT +E+ EA +A  + D +   PDG  +++ ERG ++S G++Q +A+ARA +  P +L+LDEATS LD  SE I++ ALD + +GRT++VIAHRL+T   AD IAVID G + E+GTH  L   GG Y+ +
Sbjct:  180 LGERMAASLRKDLFNSIICQDIAFFDEHKTGEIVSRLSADVQEFKSSFKLVISQGLRSSA-QASGCIV---SMYMISPQMTSAMGVIV-PTVILGGTYIGSYLRVLSKKAQAQVAKATAVG----EECISNIRTVRGFAMEDAEMELYSREVDKTRDFNEALGLGIGVFQGASNFFLNSIVLGTITY-GGYLMSDDNLNPGQLMSFLVSVQTIQRSITQVSLLFGHLVKGMASGSRIFEYIEKVP-LIPISGGVKIPYHSFFGDVEFKNITFSYPTRPEQAVLKDFSLRIPPSKTVALVGTSGGGKTTIAALLERFYDINGGGSLEIDGINIRDLDPSWLRGSAIGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSKGRTSLVIAHRLSTIKNADVIAVIDKGVMAEIGTHAALKRKGGIYSRL 668

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18")

HSP 1 Score: 206.068 bits (523), Expect = 1.088e-56
Identity = 113/362 (31.22%), Postives = 203/362 (56.08%), Query Frame = 0

Query:  261 ESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPI----DGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLV 618
            +SL     +   N   +    +   +  +  A+++ +   ++      AI  +  + ++++    + +G L+VG+L      L     P+  L  +Y   +Q    +  +  L+AT   +  +  A E+  I    D  +    V FGY+ D+ +   L   +E G+TIA+VG +G+GKST+ +L+ RFY+PQ+G++K+  +++  VT+ SLR Q+ +VPQ+  LFN TI  N+ +   + + +++ +  +   + + +   P G  + V ERG  LS GE+Q +A+ARA +    +++ DEATS+LD  +ET+I +AL  V  G+TAI+IAHRL+T + AD I V+ +G++IE GTH++L+
Sbjct:  225 DSLINYETVKYFNNEAYECQQYDKSLLKYETASLKTTESLSLLNFGQNAIFSVALSAIMMMAAKDISNGALTVGDLIMVNGLLFQLSLPLNFLGSVYREIRQSLIDMQVMFQLMATPSKITSSKGATEINFINNMEDASITFDDVKFGYNIDKNIANGLSFSVESGKTIAIVGESGSGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTSGKTAIIIAHRLSTVVHADEIFVLSNGKVIERGTHEELL 586

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13")

HSP 1 Score: 203.371 bits (516), Expect = 1.708e-56
Identity = 102/249 (40.96%), Postives = 152/249 (61.04%), Query Frame = 0

Query:  390 PPIDGRLELSGVTFGYSDDE--PVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILE-ACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVA-AGGHYAAMFASWDAH 634
            PP  GR+    V F Y       VL  L     PG+T+A+VGP+G GKSTV +L+ RFYDP  G V +DG D+  +  H LRS +G+V QEP LF  +I +N++       ++++++  C+A    D + RLP   D++V E+G+ LS G++Q +A+ARA +  P +L+LDEA+S LD  SE I++ ALD   +GRT I++AHRL+T   AD I V+ DG  ++ GTH+ L +   G Y ++  + D  
Sbjct:  239 PPFTGRITFKNVHFEYPSRPTVKVLSGLSFEASPGKTLALVGPSGCGKSTVIQLIQRFYDPSFGVVSIDGEDITTLDPHWLRSHIGIVGQEPVLFEYSIKENITMGLQGEISEKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSADAILVMKDGYRVDYGTHESLKSNKTGLYCSLVNAQDCQ 487

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6")

HSP 1 Score: 176.792 bits (447), Expect = 1.444e-46
Identity = 135/494 (27.33%), Postives = 250/494 (50.61%), Query Frame = 0

Query:  155 VFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTV-----LFQDGLVNLA-VQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANN---------RRRHNNIHHAN--VVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELP---------PIDGRLELSGVTFGYSDD-EPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATAD--EILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVA 619
            +F  + +  + FF T+  G ++ R   DI+ L       +F       A +  +T++ I + +F + PTLA  ++  V+   L++S+   R  +R  ++    I    S   E+L+G+  + A +          RR +     N  V+   R   +R + +G           I   A+  ++  + +  GQL +    +  L +T+  + +   +++Y+  +    AV +I+     E S  E+   +EL          P+ G + +  ++  Y  D + VL D+++ I PG+ I +VG TG+GKST+A  + R  +   G + +DG D++ + +H+LRS+L ++PQ+P LF+GT+  N+    P       E++E+ +   L D L    DG+D V+ E G ++S G+RQL+ LARA + + +VL++DEAT+ +D  ++ +I++A+       T + IAHRL T +   +I VID G +IE  +  +L++
Sbjct: 1509 LFQCIIKTPMSFFDTTPLGRILNRFGQDIEVLDTKMSFCIFGSMTGTFAYIATVTIISINVPIFII-PTLAIFVVYFVI---LIVSLSSSRQLKRLSSVATSPI---YSHFGETLSGINTVRAYSLEKAFYSEFERRLDEYQKRNFPVIMADRWLGIRINLIGNFI--------IFASALFSVLSRDTITPGQLGLN--VSSSLAITSILSWV---IRMYSDLENNIVAVERIK-----EYSNKESEAPWELEEDLKLNSSWPLKGEITIKNLSLKYRKDLDWVLRDINVHISPGDKIGIVGRTGSGKSTLALALFRLLEVNSGQITIDGVDIKKMGLHTLRSKLTIIPQDPTLFSGTLRLNLD---PFGLFKDMELIESLKHAYLQDFLKE--DGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKDNFRDSTVLTIAHRLQTVLDYSKIIVIDSGCIIEYDSPKNLLS 1972

HSP 2 Score: 88.9669 bits (219), Expect = 2.166e-18
Identity = 63/231 (27.27%), Postives = 112/231 (48.48%), Query Frame = 0

Query:  409 EPVLFDLDLVIEPGETIAVVGPTGAGKST-VAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARP--DATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLD------LASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFAS 630
            E +  D+ + +  G  IA++GP G+GKS+ ++ L+        GT  ++ H   A T           PQ  ++ N ++ DN+ F R       DE+L+AC    L   +   P G  + + E+G +LS G++Q ++LARA  ++  +  LD+  + +D      L  E I    L   L G+T I++ H L+     D I  + DG + E GT+ +L+     ++ + ++
Sbjct: 1161 ESLFKDISMDVNRGNLIAIIGPVGSGKSSLISALLGEMLFTSKGTNPVEIHGSVAYT-----------PQNAWMQNVSVKDNILFGRKFNKNWYDEVLKACS---LESDMEXFPSGDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGL---LRGKTRILVTHNLSFLHLVDEIYFLKDGEITEKGTYKELMEKNCDFSELISN 1374

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12")

HSP 1 Score: 172.94 bits (437), Expect = 1.944e-45
Identity = 140/484 (28.93%), Postives = 234/484 (48.35%), Query Frame = 0

Query:  151 LRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWF---------KRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIG--IIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATE---PSVLEAPDAYELPPIDGRLELSGVTFGYSDD-EPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVA 619
            L  ++   + +  + FF T+  G ++ R+  D+D L  +    L       L ++   IV+   +P       V ++PA L++  +F          R  +R  +  R  I    S  SE+++G   I A  +         + V+ ++ AN  A+          E +G  I+  A LL + G       LS G +   + Y  A  A +  LV++ +  +    AV +I+     E   P ++E     E  P  G +     +  Y +  + VL ++ L IE GE I +VG TGAGKS+    + R  +P  G + +DG D+  + +H LRS++ ++PQ+P LF+G++  N+     +     I+EA     L   +  L DG++  V E G +LS G+RQL+ LARA + R RVL+LDEAT+ +DL ++ +I++ +    +  T I IAHRL T M   +I V+ +G  +E GT  +L+A
Sbjct: 1075 LHNQMLESILKSPMSFFDTTPQGRILNRLGKDLDVLDSVMPMVLRGWISCFLGVLSSLIVVMVTTP-------VFIIPASLIIICYFFIQRIYVATSRQLKRLESSSRSPIX---SFFSETVSGAATIRAYGQSSTFISESESKVDDNQKANFPATVSNRWLAVRLEVVGNLIVFTAALLAVLGR----DSLSPGLVGLSVSYALAVTASLNWLVRMASEVETNIVAVERIQEYTKAEKEAPWIIEDTKPDEDWPRKGEISFKNYSTRYREGLDYVLKNVSLDIEGGEKIGIVGRTGAGKSSFTLSMFRIIEPVTGNIIIDGVDITKLGLHQLRSRITIIPQDPVLFSGSLRRNLD-PLDEYNETNIMEAISHSHLKPFIDSLKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVITIAHRLNTIMDYSKILVLKNGERVEYGTVAELLA 1543

HSP 2 Score: 98.2117 bits (243), Expect = 2.282e-21
Identity = 130/598 (21.74%), Postives = 261/598 (43.65%), Query Frame = 0

Query:   54 HFEQSGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVN-LVASSIRIRFANRVGEGLMY----DLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTS--DIDALTVLFQDGLVNLAVQALTLVVITIVMF--TLSPTLAA--ILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRAST-VGA-------IYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDG---RLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDL-ASETIIERALDV---VLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYA 625
            H ++  +   P   R+F GP     +L A ++ I + SL   P L    + R I    +    W G+ YA  +  +  V S +  +F  +     MY     ++  + S + R++L   T++K  +    + +   +DA  ++     +N    A   + I I +   TL P++ A  +++++++P    ++   K           ++I L    L+E + G++++      +       ++++  R   V+  T +G        I+  A   + ++  A  +L     VLD +    + F  L        P+  L  +  S      ++ +I   + +E    EA +     P D     LE + + +   +D+ +L D+ L IE G  +AVVG  G+GKS++   +    D   G +             ++R  +    Q+ ++ N ++ +N+ F +     D+     EA  L   L  LP G ++ + E+G +LS G++Q ++LARA  +   + +LD+  S +D    + I +  +     +L+ +T +++ H +      D+I V+ DGR+ E+GT+ +L+   G +A
Sbjct:  299 HEKKPQLSILPALARTF-GPS----ILSAAVIKIVSDSLNFVPPLI---LKRIIKFSTNQEELWKGILYAVILFASSTVGSLVLSKFFYK-----MYVVGMKIKTSLISTIYRKALRVPTSTKKNISTGEIVNLMSVDAQKIVDLMPYINTVWSAPFQITIAIYLLWQTLGPSVLAGVLVMILLIPFNGFIASRTKTLQTNQMKEKDERIKL----LNEVVQGIKIVKLYAWEQS----FLDIISNVRSKEVKILTHIGYLQAGNSFIWTCAPFLVSLVTFATFILSSPENVLDSE----KAFVCLTLFNILRFPLSMLPMIIGSMVLAGVSIKRINKFMNSEEIDEEAVEKKTAYPDDKFAINLEKACLKWESDEDKNILSDVSLDIEVGSLVAVVGTVGSGKSSLLSAILGEMDKVSGLI-------------TVRGSIAYGAQQAWVLNTSLKNNILFNK-SYDGDKYTRIVEACALKSDLDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMKDGRVSEIGTYKELLRQKGAFA 857

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4")

HSP 1 Score: 165.236 bits (417), Expect = 6.547e-43
Identity = 128/474 (27.00%), Postives = 231/474 (48.73%), Query Frame = 0

Query:  154 RVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWF--KRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIG---IIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIR---GLLATEPSVLEAPDAYELPPIDGRLELSGVTFGY-SDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATAD-EILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDL 617
            + +  + R  + FF ++  G ++ R + DI     +    +          + I I++ ++ P      L   +  +L+ +++    R  +R  ++ R  I    S  SESL G+  I A   +    +   N ++ ++  N  +           E IG   I G A+L +    +V  G+  VG + ++ L LT     +  L +  +  +    AV +++   GL   +   L    +Y  P   G++E    +  Y ++ + VL  ++  I  GE + +VG TGAGKS+++  + R  +   G + +DG D+  + +H LR  L V+PQEP LF+GT+  N+     +A +D +I     +V L + +  L DG++  + E G +LSSG+RQL+ LARA +   ++L+LDEAT+ +D  ++  I+  +       T + IAHRL T +  D+I V+D G +IE G+ ++L
Sbjct:  918 QTYDRIMRAPISFFDSTPQGRILNRFSKDISICDNILGSNIRQWLXCLFXFLGIVILIVSVLPLFLLFALPTSLVFILIQNIYVASSRQLKRLQSVTRSPI---YSHFSESLNGLSSIRAYGAQSKFILESINKIDTNQRCNYPSIIANRWLAMRLETIGNLCIFGXAILTMTNPELVGPGK--VGLVISYALILTQ---NLNWLXRQTSEIETNIVAVERLKEYAGLDIEKEWRLHKDTSYNWPS-QGKVEFKNYSLRYKANSDLVLKKINFTIFGGERVGIVGRTGAGKSSLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTLRSNLD--PENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTIAHRLKTIIDYDKILVLDKGTVIEFGSPNEL 1380

HSP 2 Score: 95.5153 bits (236), Expect = 1.508e-20
Identity = 65/225 (28.89%), Postives = 117/225 (52.00%), Query Frame = 0

Query:  402 TFGYS--DDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARP--DATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLD-LASETIIERALDV---VLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLV 618
             F +S  D E  L +++L I+ G   A+VG  G+GKS++   +      + G V++ G             Q+  VPQE ++ N ++ +N+ F +P  +   +++LE C    LT  LS LP G ++ + ERG +LS G+RQ ++LARA  +   V + D   S LD    +++    L+    +++ +T +++ H ++       IAV+  G +I  GT+ +L+
Sbjct:  559 NFKWSTEDSENTLSNINLRIKHGSLTAIVGTVGSGKSSLISAILGEMVKKSGKVRIKG-------------QIAYVPQESWMQNTSLKNNILFGKPYDEEWYNQVLEYC---CLTYDLSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGKSVFNNVLNNNTGIIKDKTRLLVTHGISYLPHVHHIAVMLKGEIIHEGTYQELL 767

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000004490 (supercontig:LSalAtl2s:LSalAtl2s2344:77714:79426:-1 gene:EMLSAG00000004490 transcript:EMLSAT00000004490 description:"maker-LSalAtl2s2344-augustus-gene-0.12")

HSP 1 Score: 151.754 bits (382), Expect = 6.055e-40
Identity = 119/433 (27.48%), Postives = 210/433 (48.50%), Query Frame = 0

Query:  136 RIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITI----VMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELP-PIDGRLELSGVTFGYSD--DEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATA-DEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEAT 560
            R+      G+ +   +R R+FS + +Q   FF T+K G L+ R++SD    ++L    L +     +   ++ +    +M  +SP LA + L  VVP +   +VW  +  +      ++ +A       E +A +R + A  +    ++ +   ++   D  V+ + + A +       G +    ++  GG +V    ++VG L +F+LY       +  +   Y    +   A T+I  ++    + +       LP P++G +    V F Y    D  +   L+L IE  + +A+VG     KST+  L+ R YDP +G V +DG D+R +    LR+Q+G+V QEP LF+GTI +N+ +        +EI+ A +     D +   PD  D++V ERG  LS G++Q +A+A A +  P+ L+LDEAT
Sbjct:   54 RVYLIQLSGQRITARIRSRLFSSITKQETAFFDTNKTGELVNRLSSD----SMLVSQALTSQISSGMRSSIMALAGGGMMLFMSPQLALVGLS-VVPPVAGWAVWMGKKVKNISHEYQNTLADATHLAQERIANIRTVRAFGKEVQESMAYDEKMSLVLDKGVKEALIQAKFYGMTGXTGNLIILSVMFYGGFLVTQDVITVGNLTSFILYSGYVGIGLNGVSSFYAEIMKALGAATRIWEIM-DRTTHMPLDTGLILPMPLNGHITFEKVGFSYPSRPDHSIFDGLNLNIESKQILAIVGS----KSTLTSLLLRLYDPNMGRVCIDGTDIRELNTTWLRNQIGIVMQEPVLFSGTIKENILYGTEGKIEHEEIVSAAKESNAHDFIMNFPDRYDTLVGERGVLLSGGQKQRVAIAXAILKNPQXLILDEAT 476

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BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25")

HSP 1 Score: 151.754 bits (382), Expect = 2.021e-38
Identity = 133/490 (27.14%), Postives = 232/490 (47.35%), Query Frame = 0

Query:  154 RVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFK--RASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVN-----------GHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELP--------PIDGRLELSGVTFGYSDD-EPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARP-DATAD-EILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVA 619
            ++  ++ R  L FF T+  G ++ R + DID         +  +  Q+  ++   +++    P    I+L  V+   L+   +    R  +R  ++ R  I    S  +E+L G+  I A     H    + N ++             R   VR  T+G I         +I  A+  +        G   VG   ++ L +T     +  L+ +    +    +V +I+     E    EAP  Y+LP        P  G ++       Y    + VL  ++  I+ GE I +VG TGAGKS++   + R  +P  G++ +DG ++R + +  LRS++ ++PQ+P LF+G++  N+    P +A AD +I  A E   L   +  L DG++  V E G +LS G+RQL+ LARA + + ++LVLDEAT+ +DL ++ +I+  +    +  T + IAHR+ T M ++RI V+D G + E     +L+A
Sbjct: 1038 KLLENVLRAPLSFFDTNPLGRILNRFSKDIDVAXTTLPFNIRMMIAQSFNVLGTIVIICIALPWFFVIILPAVICYALIQKFYISCARQVKRIESISRSPI---YSHFAETLTGIPTIRAFGMVHHFIDENVNKIDFNAKCYFPTVISSRWLAVRLETLGNIL--------VIFVALFSITSRGTTDPGM--VGLSLSYALSVTTI---LNMLITVSTDVETNMVSVERIK---EYENIPQEAP--YDLPNSDPPPNWPEHGVIKFDNYKTRYRKGLDLVLKGINCTIQKGEKIGIVGRTGAGKSSLTLALFRIIEPSEGSIYIDGENIRFLGLGKLRSRITIIPQDPILFSGSLRMNLD---PFEAFADRDIWIALEYSHLKSFVWNLGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLETDDLIQSTIRSEFKDSTVLTIAHRINTIMDSNRIMVLDAGTIAEFDDPQNLLA 1503

HSP 2 Score: 86.6557 bits (213), Expect = 1.014e-17
Identity = 65/245 (26.53%), Postives = 121/245 (49.39%), Query Frame = 0

Query:  396 LELSGVTFGYSDDEPV--LFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFAR--PDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDL-ASETIIERALDV---VLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLV-AAGGHYAAMFASW 631
            +++  V+  +  DE +  L D+DL IE G  +A+VG  G+GKS++   +    +   G++ +DG  + A             PQ+P+L N T+ +N+ F +         +++AC    L+  L  LP G  + + ERG +LS G++  ++LAR       + +LD+  S +D+     + E  +     +L+ +T I + H      + D+I V+ +G + E GT+ DL+    G +A    ++
Sbjct:  617 VKMCNVSLSWETDEGLNTLEDIDLDIEKGSLVAIVGQVGSGKSSLLSGILGEMEIVRGSINVDGQTIYA-------------PQQPWLQNETLRNNILFGKRFNKKLYRRVIDAC---ALSPDLDMLPAGDLTEIGERGINLSGGQKARVSLARCTXNNGDIYILDDPLSAVDVHVGRHLFENVISSQTGLLKNKTRIFVTHGAIFLPQTDKIIVMKNGVISESGTYRDLIEKENGEFAQFLINY 845

[Close]

BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001655 (supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487:1 gene:EMLSAG00000001655 transcript:EMLSAT00000001655 description:"augustus_masked-LSalAtl2s128-processed-gene-18.4")

HSP 1 Score: 142.51 bits (358), Expect = 1.813e-35
Identity = 80/243 (32.92%), Postives = 136/243 (55.97%), Query Frame = 0

Query:  380 VLEAPDAYELPPIDGRLELSGVTFGYSDDEP-VLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRL-PDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAA 620
            VL  P  +   P  G +E   +   Y D  P VL  ++   +P E I +VG TGAGKS++   + R      G + +DG  +R + +   R Q  V+PQ+PF+F+GTI  N+       +  E+ ++ +   L +++      G+D+++ + G SLS G++QLL LARA +   +V+ +DEAT+++D  ++ +I   L      +T I IAHR+ T + +DRI V+ +G++IE G  +DL+ +
Sbjct: 1205 VLNMPYNW---PNQGVVEFKDIRLRYKDHLPYVLNKVNFKTKPKEKIGIVGRTGAGKSSLIAALFRLSSFSHGEIMVDGIRIRLLPLIDFRRQFAVIPQDPFIFSGTIRQNLD-PYAQHSDQELWDSIKLSYLYNIIYSFGSSGLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETDRLIRNVLKTAFNDKTVITIAHRIETVLNSDRIFVMSNGQIIEEGKPEDLIKS 1443

HSP 2 Score: 75.485 bits (184), Expect = 2.410e-14
Identity = 119/609 (19.54%), Postives = 241/609 (39.57%), Query Frame = 0

Query:   52 DIHFEQSGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVN-LVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDF----FTTSKAGVLMTRMTSDIDALTVL---FQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVIT----------ANNRRRHNNIHHANVVNGHRDANV--------------RASTVGAIYGPANEAIGIIGQAMLLLIGG---------NMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARP--DATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDL-ASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRL--IELGTH 614
            D  F +S V +  +  ++       + + + ++  +  +S    PLL  R +     P+  + L W G  YA S+ V+  + +    +F  ++ E L   +R  V   L +Q+L            G ++  M+ D+D +      F     +L  Q +  + +      +S  +     ++++P   +++      S    +   D++ ++    +E + G+RVI             N  R+N I++      + DA                  +T  A+  P   A      A+  ++ G         N +++  +S+  L  FL        P    ++ +  Y+      +K       E  +   PD          +++   +FG++ D   L ++D+ I+  E + V+GP G+GK+T    +    + Q G           ++V    S +  V Q P++ N +I DN+ F          ++++AC    L      L  G  ++  E+G++LS G++  +ALARA      + ++D+  S+LD+     +    +  +L+ +T I+  H       A+ +  I DG    ++  TH
Sbjct:  283 DFEFHKSRVRSLQWFRKALSSKFLKEFLCIGMIKFVADVSGFFCPLLLNRLVKFMEDPK--ADLRW-GYFYAFSLFVSTFLVAICNTQFNFKMNE-LGLKVRASVIQSLYKQTLSVSEANLNKYSRGEIINFMSIDVDRVVNFAPSFH-AFWSLPFQMVVTLYLLHQQVGVSSFVGVGFAILMIPINKVIATKIGSLSGHMMSAKDDRVKII----AEIIEGIRVIKYYCWESFFTDKTNSHRNNEIYYLKW-RKYLDAVCVYLWASTPVIISVSTFATYSALGNPLTAAKVFTSMALFAMLSGPFNAFPFVINGLIEANVSIKRLARFLS------LPSINRIKYFTEYKDENTKASK-----EIETKI---PD----------IQIMEASFGFTKDCFTLRNIDVSIKRQEFVGVLGPVGSGKTTFLNAILGELEKQSG----------KISVRDPLSGIAYVQQVPWIQNKSIRDNILFGEMYIHGKYTKVIKAC---CLDHDFKHLHRGDHTIAGEKGAALSGGQKARIALARAIYQDKDIYLIDDVFSSLDVNVGYKVYTEVMLNLLKRKTRILCTHNPQYINDANIVIKIKDGEFESVKQSTH 844

[Close]

BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000752 (supercontig:LSalAtl2s:LSalAtl2s111:55855:93761:1 gene:EMLSAG00000000752 transcript:EMLSAT00000000752 description:"maker-LSalAtl2s111-augustus-gene-1.10")

HSP 1 Score: 125.946 bits (315), Expect = 4.449e-30
Identity = 71/186 (38.17%), Postives = 113/186 (60.75%), Query Frame = 0

Query:  391 PIDGRLELSGVTFGYSDDEP-VLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERAL 575
            P  G +E S V+  YS  +P VL  L+      E I ++G TGAGKS++   + R  +P+ G + +DG D+  V +  +R ++ ++PQ+P LFNG+I  N+     + T  +I  A E   L D++  L  G+DSVV E GS+ S G+RQL  LA A + R +VL++DEAT+N+D  ++++I+ A+
Sbjct:   45 PDKGVVEFSNVSMRYSQHQPNVLKGLNFKTNSFEKIGIIGRTGAGKSSIISALFRLAEPE-GEIFIDGLDICKVGLLDIRKKISIIPQDPILFNGSIRKNLD-PFNEFTDVQIWNALEQAKLYDIVVDLGHGLDSVVLEFGSNFSVGQRQLFCLAXAILRRNKVLIMDEATANVDPFTDSLIQEAI 228

HSP 2 Score: 119.013 bits (297), Expect = 6.926e-28
Identity = 63/170 (37.06%), Postives = 104/170 (61.18%), Query Frame = 0

Query:  451 GTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVS-FARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVA 619
            G + +DG ++  +++  +R ++ ++PQ+P LF GTI  N+  F      A  I  A E   L+  +S L  G+++ V E G++ S G+RQL  LARA + + +VL++DEAT+N+D  ++++I+ A+    +  T   IAHRL T M +DRI V+ DG + ELG   DL++
Sbjct: 1399 GKIFIDGVNICRLSLQDVRKKISIIPQDPLLFKGTIRKNLDPFDEYGELA--IWHALEQAKLSVAVSELEGGLETEVSEGGNNFSVGQRQLFCLARAILRKNKVLIMDEATANVDPMTDSLIQEAIRTEFKDCTVFTIAHRLYTVMDSDRILVMSDGEIKELGAPLDLLS 1566

HSP 3 Score: 90.1225 bits (222), Expect = 9.196e-19
Identity = 57/221 (25.79%), Postives = 107/221 (48.42%), Query Frame = 0

Query:  406 SDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARP--DATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLD-LASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVID-DGRLIELGTHDDLVAAGG 622
            S +E  L ++   +E GE  A++GP G GKST+ + +   +    G + + G             ++    QE ++F+G++  N+   +P  D    E++  C    L   +   PDG  + V E+G SLS G++  + LAR   A   + +LD+  S +D    + + +  +   L  +T I++ H+L     A+ I +++ DG +   GT++ L++  G
Sbjct:  728 SSNEFTLKNISFSVEIGELCAIIGPVGCGKSTIIQSLLGEFPVSYGEINIKG-------------RISYASQEAWIFSGSVRQNILMGKPLIDKRYREVIRVC---ALEHDVREWPDGDYTFVGEKGISLSGGQKSRINLARCVYASADIYILDDPLSAVDPHVGQQLFDTCIQKFLSDKTVILVTHQLQFLKNANNIILLNSDGEIEASGTYEKLMSQSG 932

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BLAST of abc transporter vs. SwissProt
Match: gi|81815540|sp|O31708.1|YKNV_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YknV)

HSP 1 Score: 388.267 bits (996), Expect = 3.543e-126
Identity = 208/565 (36.81%), Postives = 346/565 (61.24%), Query Frame = 0

Query:   65 FTLRSFLGPHRNKLVLVALLVVI--ETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAM 627
            + L S++ P+R  ++ ++ L V+    + L    L+    +D+AI  R+S  L  +    +   ++N  A+ +RIR+ N++G+ ++YDLR  +F+H+QR S  FF    AG ++ R+ +DI++L  LF  G++NL    L L  + I++FTLSP L  I +++ +P M  +S   ++   R++  VR K + + S L+ES+ G+RV  A  +   N  +   V   + ++   A+   A++ P  E    IG A+L+  G  ++++  +++G   +F  YL  F+ PI +L Q+YN    G A+  +I   L  +P+V E P+A     I+G +    V F Y +    L  +   I  G T+A+VG TG+GK+T+A L++RFYD   GT+K+DG  ++ +++ SLRSQ+ +V Q+ F+F+GTI +N+ F RP+A+ +E+++A +AVG  + +S L +G  + V ERGS LS+G+RQL++ ARA +A P +++LDEAT+++D  +E  I++AL  +L+GRTA++IAHRL+T   ADRI V+D GR IE G HD L+A GG YA +
Sbjct:   31 WRLLSYVKPYRKTILPLSFLTVLIGTAVKLVIPILIGVYVLDQAITGRNSELLIQLIFIISGLYVLNYAANVLRIRWMNQLGQHVIYDLRQHLFTHVQRLSHRFFDQRSAGSILVRIMNDINSLQELFTSGVINLLTDLLLLAGVIIILFTLSPELT-IAIMVTLPIMFFISTSLRKKIRRSWQTVRLKQSKLNSHLNESIQGIRVTQAFTQEEENMAYFDGVNQENYESWREATRKNAMFRPLVEMTNAIGTAVLIWYGATLIMNETITIGVFVSFAFYLGMFWEPISRLGQVYNQLLMGMASSERIFEFLDEQPNVKEKPNAIHNEKINGEISFEEVEFSYDEKRKALHAVSFSIPAGSTLALVGHTGSGKTTIANLISRFYDAAGGTIKIDGIPIKDLSLASLRSQISIVLQDTFIFSGTIMENIRFGRPNASDEEVMKASQAVGADEFISDLAEGYATEVEERGSVLSAGQRQLISFARALLADPAIIILDEATASIDTETEVKIQQALKTLLKGRTAVMIAHRLSTIRDADRIIVLDHGRKIEEGNHDQLLAKGGIYAGL 594

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|122064528|sp|Q2LVL0.1|MSBA_SYNAS (RecName: Full=Lipid A export ATP-binding/permease protein MsbA)

HSP 1 Score: 331.643 bits (849), Expect = 2.202e-104
Identity = 181/555 (32.61%), Postives = 312/555 (56.22%), Query Frame = 0

Query:   73 PHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAM 627
            PH  +  +  + ++I      +   L +  +D   + R++  L WI +A     LV    S  +    + +G+ ++ DLR R++  +Q+QSL FF+ +  GVLM+R+T+D++++     D + +L   + TL+ +  V+F     LA I+ +IV P  +     F +         +  +  + + L E+++G R++ A     H N   A          +++ ++ A+  P  E +G IG A ++  GG  V+ G  + G  F+FL  L   + P+++L  + N+ QQG A   ++  ++   P +++  +A ELP I  ++E+  ++F Y DD PVL +++L I  GE +A VG +G GK+T+  L+ RFYD   G + +DGHD+R V++ SLR Q+G+V Q+  LFN T+ +N+++     +  EI+EA  A    D +  LP+G D+V+ E G+ LS GERQ +++ARA +    +L+LDEATS+LD  +E  ++ AL+ +++GRT +VIAHRL+T   ADRI V+  G ++E G H+ L+A  G Y  +
Sbjct:   30 PHAPRFAVAMVCMLIAGALTSSLAFLVKPALDDIFLDRNAEMLKWIPLAIILIYLVKGGCSYFQAILMSFIGQRIVADLRNRLYEQIQKQSLSFFSKNPTGVLMSRITNDVNSIQGTVSDAVTSLMKDSFTLICLVFVIFYRDWQLA-IIAMIVFPLTIYPIAKFGQKMRSVATRTQVTMGSLTTLLQETISGTRIVRAFCMEAHENQRFARENEKLMHLALKSVSINALSSPFMEFLGGIGIAAIIFYGGYQVIKGSSTPGTFFSFLTALIMLYEPVKRLTNVNNTIQQGIAGAQRVFSIIDLVPDIVDRDEAVELPRISEKIEIRNISFAY-DDTPVLRNINLTIRAGEVVAFVGMSGGGKTTLVNLIPRFYDVTAGQILIDGHDIRDVSLISLRRQIGIVTQQTILFNDTVRNNIAYGSQGCSEKEIIEAARAANAHDFIVNLPEGYDTVIGELGTKLSGGERQRISIARALLKNAPILILDEATSSLDTEAEMEVQEALERLMKGRTTLVIAHRLSTIRNADRIVVLVKGEIVEEGAHETLLARRGEYYKL 582

[Close]

BLAST of abc transporter vs. SwissProt
Match: gi|81816277|sp|O53645.1|MDREP_MYCTU (RecName: Full=Multidrug efflux ATP-binding/permease protein Rv0194)

HSP 1 Score: 328.946 bits (842), Expect = 2.710e-98
Identity = 212/574 (36.93%), Postives = 318/574 (55.40%), Query Frame = 0

Query:   67 LRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVW-FKRASERNYALVRDKIALVLSDLSESLAGVRV---ITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATE-PSVLEAPDAYELPPIDGRLELSGVTFGYSDDE-PVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASWDAH 634
            LR  L   R  L L  LLV ++T +    PLL + GID  I     SALWW  +A  A++++  V        A   GE +++ LR  VF+H QR  LD F       ++T +T+D++A+    + GLV   +  +TLV I + +  +   L  +LL+     +L L+ W F+RAS   Y   R ++  V + L E  AG+R+     A  R   +   H++    +R   VR   + A+Y P    +  +   ++LL G   V  G +SVG L  +LLY+   + PI +L Q+++ YQ+   A  +IR LL+T  PS   +P A  +  + G +    V + Y   E P L  ++L I  G+T+  VG TG+GKST+ KLV RFYDP  GTV++DG DLR   V   R++LG+V QE ++F GT+ D +++ RPDAT  ++  A   VG   M++ L +G    V   G +LS+G+ QLLALARA +  P +L+LDEAT  LD A+E +++RA   +   RT +++AH LA A  ADRI V++ G ++E G H +L+AAGGHY+ +   W AH
Sbjct:  616 LRRLLREFRGPLALSLLLVAVQTCAGLLPPLLIRHGIDVGIRRHVLSALWWAALAGTATVVIRWVVQWGSAMVAGYTGEQVLFRLRSVVFAHAQRLGLDAFEDDGDAQIVTAVTADVEAIVAFLRTGLVVAVISVVTLVGILVALLAIRARL--VLLIFTTMPVLALATWQFRRASNWTYRRARHRLGTVTATLREYAAGLRIAQAFRAEYRGLQSYFAHSD---DYRRLGVRGQRLLALYYPFVALLCSLATTLVLLDGAREVRAGVISVGALVTYLLYIELLYTPIGELAQMFDDYQRAAVAAGRIRSLLSTRTPS---SPAARPVGTLRGEVVFDAVHYSYRTREVPALAGINLRIPAGQTVVFVGSTGSGKSTLIKLVARFYDPTHGTVRVDGCDLREFDVDGYRNRLGIVTQEQYVFAGTVRDAIAYGRPDATDAQVERAAREVGAHPMITALDNGYLHQVTAGGRNLSAGQLQLLALARARLVDPDILLLDEATVALDPATEAVVQRATLTLAARRTTLIVAHGLAIAEHADRIVVLEHGTVVEDGAHTELLAAGGHYSRL---WAAH 1178

HSP 2 Score: 256.144 bits (653), Expect = 3.617e-72
Identity = 177/553 (32.01%), Postives = 289/553 (52.26%), Query Frame = 0

Query:   65 FTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDL 617
            + L  ++  HR  L+L     +  T+     PL+T+R ID AI   D   L    V   A+     +   +R  +  R+   + +DLR+  F  L R          +G L+ R T+D+  +  L  D + N+    LTL++   VM  LS  LA + +++V   + L++   +R         ++  A V   +  ++ G+RV+ A  +     +           A +R + + A +GP  + +  +GQ  +  +GG M   G ++VG   AF   LT    P   L  +    QQ +A   ++  L+ + P++++       P     LE   V+FGY  D PVL ++ L +  GET+AVVG  G+GKST+A L TR YD   G V++ G D+R +T+ SLRS +G+VP++  LF+GTIG N+++ RPDAT ++I  A  A  + + ++ LPDG  + V  RG +LS G+RQ +ALARA + +PR+L++D+ TS +D   E  I+  L   +  RTA++   R +    ADR+AV+D GRL+++GT D++
Sbjct:    7 WRLSGYVMRHRRDLLLGFGAALAGTVIAVLVPLVTKRVIDDAIAA-DHRPLAPWAVVLVAAAGATYLLMYVRRYYGGRIAHLVQHDLRMDAFQALLRWDGRQQDRWSSGQLIVRTTNDLQLVQALLFD-VPNVLRHVLTLLLGVAVMTWLSVPLALLAVLLVP-VIGLIAHRSRRLLAAATHCAQEHKAAVTGVVDAAVCGIRVVKAFGQEERETVKLVTASRALYAAQLRVARLNAHFGPLLQTLPALGQMAVFALGGWMAAQGSITVGTFVAFWACLTLLARPACDLAGMLTIAQQARAGAVRVLELIDSRPTLVDGTKPLS-PEARLSLEFQRVSFGYVADRPVLREISLSVRAGETLAVVGAPGSGKSTLASLATRCYDVTQGAVRIGGQDVRELTLDSLRSAIGLVPEDAVLFSGTIGANIAYGRPDATPEQIATAARAAHIEEFVNTLPDGYQTAVGARGLTLSGGQRQRIALARALLHQPRLLIMDDPTSAVDAVIECGIQEVLREAIADRTAVIFTRRRSMLTLADRVAVLDSGRLLDVGTPDEV 555

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BLAST of abc transporter vs. SwissProt
Match: gi|817033881|sp|A1KF14.1|MDREP_MYCBP (RecName: Full=Multidrug efflux ATP-binding/permease protein BCG_0231)

HSP 1 Score: 328.946 bits (842), Expect = 2.710e-98
Identity = 212/574 (36.93%), Postives = 318/574 (55.40%), Query Frame = 0

Query:   67 LRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVW-FKRASERNYALVRDKIALVLSDLSESLAGVRV---ITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATE-PSVLEAPDAYELPPIDGRLELSGVTFGYSDDE-PVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASWDAH 634
            LR  L   R  L L  LLV ++T +    PLL + GID  I     SALWW  +A  A++++  V        A   GE +++ LR  VF+H QR  LD F       ++T +T+D++A+    + GLV   +  +TLV I + +  +   L  +LL+     +L L+ W F+RAS   Y   R ++  V + L E  AG+R+     A  R   +   H++    +R   VR   + A+Y P    +  +   ++LL G   V  G +SVG L  +LLY+   + PI +L Q+++ YQ+   A  +IR LL+T  PS   +P A  +  + G +    V + Y   E P L  ++L I  G+T+  VG TG+GKST+ KLV RFYDP  GTV++DG DLR   V   R++LG+V QE ++F GT+ D +++ RPDAT  ++  A   VG   M++ L +G    V   G +LS+G+ QLLALARA +  P +L+LDEAT  LD A+E +++RA   +   RT +++AH LA A  ADRI V++ G ++E G H +L+AAGGHY+ +   W AH
Sbjct:  616 LRRLLREFRGPLALSLLLVAVQTCAGLLPPLLIRHGIDVGIRRHVLSALWWAALAGTATVVIRWVVQWGSAMVAGYTGEQVLFRLRSVVFAHAQRLGLDAFEDDGDAQIVTAVTADVEAIVAFLRTGLVVAVISVVTLVGILVALLAIRARL--VLLIFTTMPVLALATWQFRRASNWTYRRARHRLGTVTATLREYAAGLRIAQAFRAEYRGLQSYFAHSD---DYRRLGVRGQRLLALYYPFVALLCSLATTLVLLDGAREVRAGVISVGALVTYLLYIELLYTPIGELAQMFDDYQRAAVAAGRIRSLLSTRTPS---SPAARPVGTLRGEVVFDAVHYSYRTREVPALAGINLRIPAGQTVVFVGSTGSGKSTLIKLVARFYDPTHGTVRVDGCDLREFDVDGYRNRLGIVTQEQYVFAGTVRDAIAYGRPDATDAQVERAAREVGAHPMITALDNGYLHQVTAGGRNLSAGQLQLLALARARLVDPDILLLDEATVALDPATEAVVQRATLTLAARRTTLIVAHGLAIAEHADRIVVLEHGTVVEDGAHTELLAAGGHYSRL---WAAH 1178

HSP 2 Score: 255.758 bits (652), Expect = 4.789e-72
Identity = 178/555 (32.07%), Postives = 292/555 (52.61%), Query Frame = 0

Query:   65 FTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRL--ELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDL 617
            + L  ++  HR  L+L     +  T+     PL+T+R ID AI   D   L    V   A+     + + +R  +  R+   + +DLR+  F  L R          +G L+ R T+D+  +  L  D + N+    LTL++   VM  LS  LA + +++V   + L++   +R         ++  A V   +  ++ G+RV+ A  +     +           A +R + + A +GP  + +  +GQ  +  +GG M   G ++VG   AF   LT    P   L  +    QQ +A   ++  L+ + P++++      L   + RL  E   V+FGY  D PVL ++ L +  GET+AVVG  G+GKST+A L TR YD   G V++ G D+R +T+ SLRS +G+VP++  LF+GTIG N+++ RPDAT ++I  A  A  + + ++ LPDG  + V  RG +LS G+RQ +ALARA + +PR+L++D+ TS +D   E  I+  L   +  RTA++   R +    ADR+AV+D GRL+++GT D++
Sbjct:    7 WRLSGYVMRHRRDLLLGFGAALAGTVIAVLVPLVTKRVIDDAIAA-DHRPLAPWAVVLVAAAGATYLLTYVRRYYGGRIAHLVQHDLRMDAFQALLRWDGRQQDRWSSGQLIVRTTNDLQLVQALLFD-VPNVLRHVLTLLLGVAVMTWLSVPLALLAVLLVP-VIGLIAHRSRRLLAAATHCAQEHKAAVTGVVDAAVCGIRVVKAFGQEERETVKLVMASRALYAAQLRVARLNAHFGPLLQTLPALGQMAVFALGGWMAAQGSITVGTFVAFWACLTLLARPACDLAGMLTIAQQARAGAVRVLELIDSRPTLVDGTKPLSL---EARLSLEFQRVSFGYVADRPVLREISLSVRAGETLAVVGAPGSGKSTLASLATRCYDVTQGAVRIGGQDVRELTLDSLRSAIGLVPEDAVLFSGTIGANIAYGRPDATPEQIATAARAAHIEEFVNTLPDGYQTAVGARGLTLSGGQRQRIALARALLHQPRLLIMDDPTSAVDAVIECGIQEVLREAIADRTAVIFTRRRSMLTLADRVAVLDSGRLLDVGTPDEV 555

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BLAST of abc transporter vs. SwissProt
Match: gi|1176951|sp|P45861.1|YWJA_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YwjA)

HSP 1 Score: 314.309 bits (804), Expect = 5.632e-98
Identity = 180/563 (31.97%), Postives = 308/563 (54.71%), Query Frame = 0

Query:   69 SFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASS----IRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAM 627
            S+  P++    L     +   L   + PL+    ID  +  RD    W + +A +  +      SS    I   + + +G  +  D+R  +F HLQ+ S  F+  +K G LM+++T+D+  +  +   G  +L +  +T++    VM  ++  LA +L  I++P ++ L+++F +   + +  +   I    + +  ++ G+R++ A           A      R   + +  + A  G  +  +       +LL G   V+ G LS GE  AF+L     F PI ++  +   Y +G A       L+ TEP + ++PD+ ++  + G +    V+FGY D   VL D++L I+ GET+A VGP+GAGKST+  L+ RFY+   G + +DG  ++ +T+ SLR Q+GVV Q+ FLF+GT+ +N+++ R  A+ ++I +A +   L +++  +PDG+D+++ ERG  LS G++Q L++AR F+  P +L+LDEATS LD  +E  I++AL  + EGRT +VIAHRLAT   ADRI V+ +  + E G H DL+ AGG Y+ +
Sbjct:    7 SYYKPYKTLFFLDFFSAIAGGLMELSFPLIVNYFIDTLLPGRD----WGLIIATSIGLFAVYALSSALQYIVTYWGHMLGINIETDMRKSLFDHLQKLSFKFYDNNKTGTLMSKLTNDLMYIGEVAHHGPEDLFIAVMTILGAFGVMLFINWQLA-LLTFIIMPIVIWLALYFNKKMTKAFTTLNKDIGDFSARVENNIGGIRLVQAFGNEAFEKERFAVNNQRFRVTKLSSYKIMAKNGSISYMLTRFVTLFVLLCGTWFVIRGSLSYGEFVAFVLLTNVLFRPIDKINAIIEMYPRGIAGFKSYMELMETEPDIQDSPDSKDVSGLKGNIRYKHVSFGYDDHHNVLNDINLSIQAGETVAFVGPSGAGKSTLCSLLPRFYEASEGDITIDGISIKDMTLSSLRGQIGVVQQDVFLFSGTLRENIAYGRLGASEEDIWQAVKQAHLEELVHNMPDGLDTMIGERGVKLSGGQKQRLSIARMFLKNPSILILDEATSALDTETEAAIQKALQELSEGRTTLVIAHRLATIKDADRIVVVTNNGIEEQGRHQDLIEAGGLYSRL 564

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BLAST of abc transporter vs. SwissProt
Match: gi|7388395|sp|Q9WYC4.1|Y288_THEMA (RecName: Full=Uncharacterized ABC transporter ATP-binding protein TM_0288)

HSP 1 Score: 308.145 bits (788), Expect = 2.749e-95
Identity = 186/583 (31.90%), Postives = 307/583 (52.66%), Query Frame = 0

Query:   56 EQSGVETTPFTLRSFLG---PHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSAL----WWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDL-SESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFAS 630
            E+  ++    TLR  LG   PH   L++V + V + ++     P L  + ID   VPR    L      +G  YA + L+  +   I +  +  V    ++ LR  +F  LQR  + FF  +  G +++R+ +D+D +  +  + ++      +TL    I+MF ++  L+ + L IV   +L+  +    +  R Y     ++   L+ +  E ++G+ VI    R          V    R    +A     +  P    +  +G A++   GG + L   ++VG +  F+ Y   F  P+ +L   +N  Q   A+  +I  +L  E    + PDA EL  + G +E   V F Y   +PVL D+   I+PG+ +A+VGPTG+GK+T+  L+ RFYD   G + +DG D+R +   SLRS +G+V Q+  LF+ T+ +N+ +  P AT +EI EA +       +  LP+G ++V+ + G  LS G+RQLLA+ RAF+A P++L+LDEATSN+D  +E  I+ A+  ++EG+T+I+IAHRL T   AD I V+ DG ++E+G HD+L+   G Y  +F S
Sbjct:   14 EKPALKNPTATLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLPRYMLILGTIYALTSLLFWLQGKIMLTLSQDV----VFRLRKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTLSIVPLTVLITQIV--SSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEK-DDPDAVELREVRGEIEFKNVWFSYDKKKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDELIQKRGFYYELFTS 589

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BLAST of abc transporter vs. SwissProt
Match: gi|1723607|sp|P54719.1|YFIC_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YfiC)

HSP 1 Score: 307.76 bits (787), Expect = 3.972e-95
Identity = 179/578 (30.97%), Postives = 305/578 (52.77%), Query Frame = 0

Query:   56 EQSGVETTPFTLR---SFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFAS 630
            +++  + T  TLR   S+L   +  L+LV L+VVI  +    GP +  + ID  IV +  S L  + +   A  ++  ++   +  +   + +G ++ +R  +F+HL    + FF   + G LM+R+T+DI+ ++      ++ +    +T V    VM  +SP L  I L  ++P M     W    + + +   +  +  +   + ES++G +VI A +R +             + +   A T+         ++  +   M+  IGG   L G +S+G +  F  Y   F  P+  L   +N+     A   ++  +L  +    +  +A   P   G +E   V+FGY   +  L  L   +  G++IA VGPTGAGK+TV  L+ RFY+P  G + +DG D++ +T  SLR  +G V Q+ FLF GTI +N+ + R DA+  E+  A +       + RLP G D+V+ + GS +S G++QL+++ARA +A P +L+LDEATSN+D  +E  I+ AL  ++EGRT+++IAHRL T  RAD+I V+ +G +IE G+HD+L+   G Y+ ++ S
Sbjct:   24 KRAKAKDTKGTLRRIWSYLAERKGLLILVMLMVVISAIFGLLGPFVIGKAIDHFIVGKTVSGLIPVLLLLLAIYIIQSLSLWFQNYWMITISQGTVFRMRSELFTHLHELPIPFFDKQRHGELMSRVTNDIENVSSTLNTSVIQILSSVITFVGTIAVMLYMSPLLTLITLT-IIPVMAASLKWITNRTGKLFKEQQKNLGDLNGYIEESVSGAKVIKAYSREKQITAEFLEKNAALKTSGFWAQTISGFIPKVMNSLNNLSFTMIAAIGGLFALKGWISIGSIVVFAEYSRQFTRPLNDLANQFNTMLSAIAGAERVFDVLDEKEEREDEKNAVHQPIQTGSIEFRDVSFGYDKGQQTLKHLQFTVPAGQSIAFVGPTGAGKTTVTNLLARFYEPNDGKILIDGTDIKTLTRASLRKNMGFVLQDSFLFQGTIRENIRYGRLDASDQEVEAAAKTANAHSFIERLPKGYDTVLTQNGSGISQGQKQLISIARAVLADPVLLILDEATSNIDTVTEVNIQEALARLMEGRTSVIIAHRLNTIQRADQIVVLKNGEMIEKGSHDELIRQKGFYSDLYES 600

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BLAST of abc transporter vs. SwissProt
Match: gi|81827826|sp|Q6G868.1|Y1788_STAAS (RecName: Full=Putative multidrug export ATP-binding/permease protein SAS1788 >gi|81827988|sp|Q6GFJ1.1|Y1956_STAAR RecName: Full=Putative multidrug export ATP-binding/permease protein SAR1956 >gi|81832388|sp|Q7A0J1.1|Y1806_STAAW RecName: Full=Putative multidrug export ATP-binding/permease protein MW1806 >gi|81832479|sp|Q7A4T3.1|Y1683_STAAN RecName: Full=Putative multidrug export ATP-binding/permease protein SA1683 >gi|81855910|sp|Q99T13.1|Y1866_STAAM RecName: Full=Putative multidrug export ATP-binding/permease protein SAV1866 >gi|81859551|sp|Q5HEQ8.1|Y1924_STAAC RecName: Full=Putative multidrug export ATP-binding/permease protein SACOL1924 >gi|121957842|sp|Q2FFM9.1|Y1847_STAA3 RecName: Full=Putative multidrug export ATP-binding/permease protein SAUSA300_1847 >gi|121957846|sp|Q2G2M9.1|Y2003_STAA8 RecName: Full=Putative multidrug export ATP-binding/permease protein SAOUHSC_02003)

HSP 1 Score: 301.982 bits (772), Expect = 3.108e-93
Identity = 185/581 (31.84%), Postives = 321/581 (55.25%), Query Frame = 0

Query:   69 SFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWW----------IGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKR----ASERNYALVRDKIALVLSDLSESLAGVRVITA----NNRRRHNNIHHANVVN-GHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDE-PVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFA 629
             F+ P++ ++    ++ +I+       PLL +  ID  I   ++ AL            IG+A    ++V      IR   A      ++YD+R ++++HLQ  S  F+  ++ G +++R+ +D++        GL+N+ +  +T+++   +MF L   L    L I    +L + V+F R      ER+ AL     A V   L E + G+ V+ +    +N  ++ +  + N +    +     A +  AI       +  IG  +++ +G  + + G ++VG L AF+ YL   F P+++LV  + +  Q  A++ ++  L+  +  +     A  +    GR+++  V+F Y+D+E P+L D++L IE GET+A VG +G GKST+  L+ RFYD   G + +DGH+++     SLR+Q+G+V Q+  LF+ T+ +N+   RP AT +E++EA +     D +  LP G D+ V ERG  LS G++Q L++AR F+  P +L+LDEATS LDL SE+II+ ALDV+ + RT +++AHRL+T   AD+I VI++G ++E GTH +L+A  G Y  +++
Sbjct:    7 QFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVI---NNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQAL-----AEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALKHTRWNAYSFAAI-----NTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYS 574

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BLAST of abc transporter vs. SwissProt
Match: gi|221222997|sp|P71082.2|YGAD_BACSU (RecName: Full=Putative multidrug export ATP-binding/permease protein YgaD)

HSP 1 Score: 301.982 bits (772), Expect = 3.454e-93
Identity = 181/575 (31.48%), Postives = 315/575 (54.78%), Query Frame = 0

Query:   69 SFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAI------VPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWF------KRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGH-RDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGY-SDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFA 629
             F+ P++ ++ +  L+ +++     A PLL +  +D  I        + +S    + + +A  +++       R  FA      ++YD+R ++F H+Q+ SL F+  ++ G +++R+ +D++        GL+N+ +  LT++++  +M TL   L   L+ IV+  +  +SV +      K   ER+ AL     A V   L E + G+ VI +     H      N  NGH  D  +R +   A        I  +   +++   G  V++G L+VG + AF+ Y+   + P+++L+    +  Q  A++ ++   +     + + P+A +   I G +E   V+F Y  D E +L D+ L +  GET+A+VG +G GKST+  L+ RFYD   G + +DG D+R     SLR+Q+G+V Q+ FLF+ TI +N++  +PDAT +EI+EA +A    + +   P+G ++ V ERG  LS G++Q +++AR F+  P +L+LDEATS LDL SE  I+ A+D + + RT  V+AHRL+T   AD+I V+++G +IE+GTHD+L+     Y  +F 
Sbjct:    9 QFVKPYKKQIFVTVLIGIVKFSIPLALPLLLKYVVDDIIQGGGTASDKTTSLFTIMAIMFALFLILRPPVEYYRQYFAQWTASKVLYDIRAKLFDHIQKLSLRFYANTRTGEVISRVINDVEQTKDFVITGLMNIWLDMLTILIVISIMLTLDVKLT--LISIVLFPLYGISVKYFYGRLRKLTRERSQAL-----AQVQGHLHERIQGMPVIRSFAIEDHEQAQF-NEKNGHFLDKAIRHTNWNAKTFAVVNTITDLAPLIVIACAGYFVINGPLTVGTMVAFVGYIDRMYNPVRRLINSSTTLTQSIASMDRVFEFIDEPYELTDKPNAIKADQIRGGVEFQNVSFQYEKDKENILHDVSLKVNRGETVALVGMSGGGKSTLVSLIPRFYDVTSGRLLIDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENIAIGKPDATLEEIIEAAKAANAHEFIMSFPEGYETRVGERGVKLSGGQKQRISIARVFLKNPPLLILDEATSALDLESEHYIQEAMDKLAKDRTTFVVAHRLSTITHADKIVVMENGTIIEIGTHDELMDYESQYKHLFT 575

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BLAST of abc transporter vs. SwissProt
Match: gi|121957837|sp|Q2YU20.1|Y1799_STAAB (RecName: Full=Putative multidrug export ATP-binding/permease protein SAB1799c)

HSP 1 Score: 299.671 bits (766), Expect = 2.250e-92
Identity = 184/581 (31.67%), Postives = 319/581 (54.91%), Query Frame = 0

Query:   69 SFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWW----------IGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKR----ASERNYALVRDKIALVLSDLSESLAGVRVITA----NNRRRHNNIHHANVVN-GHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDE-PVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFA 629
             F+ P++ ++    ++ +I+       PLL +  ID  I   ++ AL            IG+A    ++V      IR   A      ++YD+R ++++HLQ  S  F+  ++ G +++R+ +D++        GL+N+ +  +T+++   +MF L   L    L I    +L + V+F R      ER+ AL     A V   L E + G+ V+ +    +N  ++ +  +AN +    +     A +   I       +  IG  +++ +G  + + G ++VG L AF+ YL   F P+++LV  + +  Q  A++ ++  L+  +  +     A  +    GR+++  V F Y+D+E P+L D++L IE GET+A VG +G GKST+  L+ RFYD   G + +DGH+++     SLR+Q+G+V Q+  LF+ T+ +N+   RP AT +E++E  +     D +  LP G D+ V ERG  LS G++Q L++AR F+  P +L+LDEATS LDL SE+II+ ALDV+ + RT +++AHRL+T   AD+I VI++G ++E GTH +L+A  G Y  +++
Sbjct:    7 QFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVI---NNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHLQALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQAL-----AEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNANFLTRALKHTRWNAYSFATI-----NTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLIDEDYDIKNGVGAQPIEIKQGRIDIYHVNFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEVAKVANAHDFIMNLPQGYDTEVGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYS 574

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BLAST of abc transporter vs. nr
Match: gi|503814987|ref|WP_014048981.1| (MULTISPECIES: ABC transporter ATP-binding protein [Streptomyces] >gi|344318343|gb|AEN13031.1| ABC transporter related protein [Streptomyces sp. SirexAA-E] >gi|1051829617|emb|SCD55509.1| ATP-binding cassette, subfamily B [Streptomyces sp. DpondAA-F4a] >gi|1051843935|emb|SCD44753.1| ATP-binding cassette, subfamily B [Streptomyces sp. BpilaLS-43] >gi|1059842582|emb|SCL82310.1| ATP-binding cassette, subfamily B [Streptomyces sp. DpondAA-F4])

HSP 1 Score: 670.618 bits (1729), Expect = 0.000e+0
Identity = 349/613 (56.93%), Postives = 443/613 (72.27%), Query Frame = 0

Query:   24 GLPFAGVPSELAEKAKAILETEPEHPKADIHFEQS--GVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASWDAH 634
            GLPFAGVP E+      +L TEPEHP+ ++ FE      +    +LR  + P+   ++L  + V +E L+LQAGP LTQ GID  I  RDS  L  + VAY AS+++  VA + R++   R+   +M DLRVRVF+ LQR SL+F+T  KAGV+MTRMTSDI+ L  L QDGL   AVQ LT+VV+T+V+FT    LA I +V+VVP +  LSVWF RAS + Y  VRD IA V++DLSESL GVR++ A+NR+RHN  HH  V   + DANVR   + +IY P+ + IG+ GQ +LL IG  MV DG+L++GEL AFLL L AFF PIQQLVQLYN+YQQGQ+++ K+R LL T   V EAP A +LP ++G +    VTFGY    PV+ D+ L I  GET+A VGPTGAGKST+AKLVTRFYDP  G + +DG DLR V + SLR Q+GVVPQEPFLF G++ DN+ FA PD + D + EA   VGL D++ RLP G+D+VV ERG SLSSGERQL+ALARAF+A+PRVLVLDEATSNLDL SET IE ALDV+LEGRTAI+IAHRL+TAM+ADRI V+D+GR++E+GTHD L+AA G Y  M+A+W + 
Sbjct:   22 GLPFAGVPPEMRASVDKLLATEPEHPEPEVTFEHGRPDPDGAKLSLRRLIRPYGAMVLLAGVFVALEALTLQAGPKLTQIGIDDGITARDSVTLVLVAVAYLASVVITGVAQAARVKVTGRIAGWVMNDLRVRVFTQLQRLSLNFYTGEKAGVIMTRMTSDIENLQALLQDGLAQFAVQGLTMVVVTVVLFTFDVRLALITVVLVVPVLTALSVWFHRASGKGYVRVRDTIAAVIADLSESLQGVRIVAAHNRQRHNTEHHRQVTGTYYDANVRTGRINSIYTPSTQVIGVAGQLVLLAIGAGMVADGELTIGELVAFLLSLGAFFQPIQQLVQLYNTYQQGQSSIVKLRQLLGTRAEVEEAPGAVDLPQVEGEIVFEDVTFGYVPGRPVITDVSLHIRAGETVAFVGPTGAGKSTLAKLVTRFYDPASGRILIDGRDLRDVRIESLRRQIGVVPQEPFLFAGSLRDNICFAAPDTSDDRVREALRVVGLVDVVERLPSGLDTVVQERGQSLSSGERQLVALARAFLAQPRVLVLDEATSNLDLQSETKIEEALDVLLEGRTAILIAHRLSTAMKADRIVVVDEGRIVEVGTHDQLLAADGKYTQMYATWTSQ 634

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BLAST of abc transporter vs. nr
Match: gi|655407634|ref|WP_028806437.1| (ABC transporter ATP-binding protein [Streptomyces sp. 303MFCol5.2])

HSP 1 Score: 668.692 bits (1724), Expect = 0.000e+0
Identity = 330/611 (54.01%), Postives = 438/611 (71.69%), Query Frame = 0

Query:   26 PFAGVPSELAEKAKAILETEPEHPKADIHFEQS--GVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASWDAH 634
            PFAGVP E+      +LE E EH ++++ FE S    +     LR  + P+    ++  + V +E L LQAGP LTQ GID  I+ +D+  L  +   Y  S++V  +A + R++   R+   +M DLRVRVF+ LQR SL+F+T  KAGV+MTRMTSDI+ L  L Q+GL   AVQ LT+V++T+++FT    LA I +V+VVP +  LS+WF+RAS + Y  VRD  A V++DLSESL GVR++TA+NR++ N  HH  V   + DANV+   + ++Y P+ + +G+ GQ  LL IG  MV DG L++GEL AFLLYL AFF PIQQLVQLYN+YQQGQ++V K++ LL+  P V E P A +LP ++G +    VTFGY  D PV+ ++ L I  GET+A VGPTGAGKST+AKLVTRFYDP  G + +DG DLR V + SLR Q+GVVPQEPFLF G + DN+ FA PD + +++ EA  AVGL D++ RLPDG+D+VV ERG SLSSGERQL+ALARAF+A+PRVLVLDEATSNLDL +E  IE ALDV+LEGRTAI+IAHRL+TAM+ADRI V+D+GR++E+G+HD LVAA G Y+ M+A+W + 
Sbjct:   24 PFAGVPPEMRANVDKLLEAELEHAESEVVFEHSRPDPDGAKLNLRRLVRPYWPMALMAGVFVGVEALMLQAGPKLTQIGIDDGIMGKDNGTLALVAGLYLVSLVVTGLAQAARVKSTGRIAASVMNDLRVRVFTQLQRLSLNFYTGEKAGVIMTRMTSDIENLQALLQEGLAQFAVQGLTMVIVTVILFTYDVWLALITIVLVVPILTALSLWFRRASGKGYLRVRDTTADVVADLSESLQGVRIVTAHNRQQRNTEHHRQVTGRYYDANVQTGRINSVYTPSTQVVGVAGQVALLAIGAGMVTDGDLTIGELVAFLLYLGAFFQPIQQLVQLYNTYQQGQSSVVKLKELLSIRPEVEEQPGAVDLPRVEGEITFDDVTFGYLPDRPVISEVALNIRAGETVAFVGPTGAGKSTLAKLVTRFYDPSSGRILIDGRDLRDVRIESLRRQIGVVPQEPFLFAGPLRDNIRFAAPDVSDEQVREALRAVGLVDVVERLPDGLDTVVQERGQSLSSGERQLVALARAFLAQPRVLVLDEATSNLDLQTEAKIEDALDVLLEGRTAILIAHRLSTAMKADRIVVVDEGRIVEVGSHDQLVAADGKYSQMYATWTSQ 634

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BLAST of abc transporter vs. nr
Match: gi|739800891|ref|WP_037652878.1| (ABC transporter ATP-binding protein [Streptomyces avermitilis] >gi|973879749|gb|KUN49149.1| ABC transporter ATP-binding protein [Streptomyces avermitilis] >gi|1151926013|gb|OOV24358.1| ABC transporter ATP-binding protein [Streptomyces avermitilis])

HSP 1 Score: 658.677 bits (1698), Expect = 0.000e+0
Identity = 345/610 (56.56%), Postives = 442/610 (72.46%), Query Frame = 0

Query:   24 GLPFAGVPSELAEKAKAILETEPEHPKADIHFEQS--GVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASW 631
            GLPFAGVP E+      +L+TEPEHP+ ++ FE      +    +LR  + P+    +L  + V +E L+LQAGP LTQ GID  I  +DS  L  + +AY  S++V   A + R++   R+   +M DLRVRVF+ LQR SL+F+T  K+GV+MTRMTSDI+ L  L QDGL  LAVQ LT+VV+T+V+FT    LA I +V+VVP +  LSVWF RAS + Y  VRD IA V++DLSESL GVR++TA+NR++HN   H  V   + DANVR   + +IY P+ + IG++GQ  LL IG  MV DG+L++GEL AFLL L AFF PIQQLVQLYN+YQQGQ+++ K+R LL+T   V EAP A +LP ++G +    VTFGY  D PV+ ++ L I  GET+A VGPTGAGKST+AKLVTRFYDP  G + +DG DLR V + SLR Q+GVVPQEPFLF G + DN+ FA PDA+   + EA   VGL D++ RLPDG+D+VV ERG SLSSGERQL+ALARAF+A+PRVLVLDEATSNLDL SET IE+ALDV+LEGRTAI+IAHRL+TAM+ADRI V+D+GR++E+G HD L+AA G Y  M+A W
Sbjct:   21 GLPFAGVPPEMQASVDTLLKTEPEHPEPEVVFEHGRPDPDGAELSLRRLIRPYWPIALLGGVFVALEALTLQAGPKLTQIGIDDGITAKDSGTLVLVAIAYLVSLVVTGAAQAARVKVTGRIAAWVMNDLRVRVFTQLQRLSLNFYTGEKSGVIMTRMTSDIENLQALLQDGLAQLAVQGLTMVVVTVVLFTFDVRLALITVVLVVPVLTALSVWFHRASGKGYVRVRDTIAAVIADLSESLQGVRIVTAHNRQQHNIEQHRQVTGTYYDANVRTGRINSIYTPSTQVIGVVGQLALLAIGAGMVADGELTIGELVAFLLSLGAFFQPIQQLVQLYNTYQQGQSSIVKLRELLSTRAEVEEAPGAVDLPKVEGEIVFEDVTFGYVPDRPVISEVSLDIRAGETVAFVGPTGAGKSTLAKLVTRFYDPTSGRILIDGRDLRDVRIESLRRQIGVVPQEPFLFAGPLRDNIRFAVPDASDGRVREALRVVGLVDVVERLPDGLDTVVQERGQSLSSGERQLVALARAFLAQPRVLVLDEATSNLDLQSETKIEQALDVLLEGRTAILIAHRLSTAMKADRIVVVDEGRIVEVGAHDQLLAADGKYTQMYAVW 630

[Close]

BLAST of abc transporter vs. nr
Match: gi|663326435|ref|WP_030326248.1| (ABC transporter ATP-binding protein [Streptomyces flavochromogenes])

HSP 1 Score: 658.677 bits (1698), Expect = 0.000e+0
Identity = 347/610 (56.89%), Postives = 440/610 (72.13%), Query Frame = 0

Query:   24 GLPFAGVPSELAEKAKAILETEPEHPKADIHFEQS--GVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASW 631
            GLPFAGVP E+      +L+TEPEHP+  + FE      +    +LR  + P+   ++L  + V +E L+LQAGP LTQ GID  I  +D   L  + VAY  S++V   A + R++   R+   +M DLRVRVF+ LQR SL+F+T  K+GV+MTRMTSDI+ L  L QDGL   AVQ LT+VV+T+V+FT    LA I +V+VVP +  LSVWF RAS + Y  VRD IA V++DLSESL GVR++TA+NR+RHN   H  V   + DANVR   + +IY P+ + IG+ GQ  LL IG  MV DG+L++GEL AFLL L AFF PIQQLVQLYN+YQQGQ+++ K+R LL+T   V EAP A +LP ++G +    VTFGY  D PV+ ++ L I  GET+A VGPTGAGKST+AKLVTRFYDP  G + +DG DLR V + SLR Q+GVVPQEPFLF G + DN+ FA PDA+ D + EA   VGL D++ RLPDG+D+VV ERG SLSSGERQL+ALARAF+A+PRVLVLDEATSNLDL SET IE+ALDV+LEGRTAI+IAHRL+TAM+ADRI V+D+GR++E+G HD LVAA G Y  M+A W
Sbjct:   21 GLPFAGVPPEMQASVDTLLKTEPEHPEPQVVFEHGRPDPDGAGLSLRRLIRPYWPIVLLAGVFVALEALTLQAGPKLTQIGIDDGITAKDFGTLVLVAVAYLISLVVTGAAQAARVKVTGRIAAWVMNDLRVRVFTQLQRLSLNFYTGEKSGVIMTRMTSDIENLQALLQDGLAQFAVQGLTMVVVTVVLFTFDVRLALITVVLVVPVLTALSVWFHRASGKGYVRVRDTIAAVIADLSESLQGVRIVTAHNRQRHNIEQHRQVTGTYYDANVRTGRINSIYTPSTQVIGVAGQLALLAIGAGMVADGELTIGELVAFLLSLGAFFQPIQQLVQLYNTYQQGQSSIVKLRELLSTRAEVEEAPGAVDLPKVEGEIVFEDVTFGYVPDRPVISEVSLNIRAGETVAFVGPTGAGKSTLAKLVTRFYDPTSGRILIDGRDLRDVRMESLRRQIGVVPQEPFLFAGPLRDNIRFAVPDASDDRVREALRVVGLVDVVERLPDGLDTVVQERGQSLSSGERQLVALARAFLAQPRVLVLDEATSNLDLQSETKIEQALDVLLEGRTAILIAHRLSTAMKADRIVVVDEGRIVEVGAHDQLVAADGRYTQMYAVW 630

[Close]

BLAST of abc transporter vs. nr
Match: gi|499292544|ref|WP_010983802.1| (ABC transporter ATP-binding protein [Streptomyces avermitilis] >gi|15824035|dbj|BAB69247.1| ABC transporter [Streptomyces avermitilis] >gi|29606011|dbj|BAC70075.1| putative ABC transporter ATP-binding protein [Streptomyces avermitilis MA-4680 = NBRC 14893])

HSP 1 Score: 657.136 bits (1694), Expect = 0.000e+0
Identity = 346/613 (56.44%), Postives = 442/613 (72.10%), Query Frame = 0

Query:   24 GLPFAGVPSELAEKAKAILETEPEHPKADIHFEQ-----SGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASW 631
            GLPFAGVP E+      +L+TEPEHP+ ++ FE       G E    +LR  + P+    +L  + V +E L+LQAGP LTQ GID  I  +DS  L  + +AY  S++V   A + R++   R+   +M DLRVRVF+ LQR SL+F+T  K+GV+MTRMTSDI+ L  L QDGL  LAVQ LT+VV+T+V+FT    LA I +V+VVP +  LSVWF RAS + Y  VRD IA V++DLSESL GVR++TA+NR++HN   H  V   + DANVR   + +IY P+ + IG++GQ  LL IG  MV DG+L++GEL  FLL L AFF PIQQLVQLYN+YQQGQ+++ K+R LL+T   V EAP A +LP ++G +    VTFGY  D PV+ ++ L I  GET+A VGPTGAGKST+AKLVTRFYDP  G + +DG DLR V + SLR Q+GVVPQEPFLF G + DN+ FA PDA+   + EA   VGL D++ RLPDG+D+VV ERG SLSSGERQL+ALARAF+A+PRVLVLDEATSNLDL SET IE+ALDV+LEGRTAI+IAHRL+TAM+ADRI V+D+GR++E+G HD L+AA G Y  M+A W
Sbjct:   21 GLPFAGVPPEMQASVDTLLKTEPEHPEPEVVFEHGRPDPDGAE---LSLRRLIRPYWPIALLGGVFVALEALTLQAGPKLTQIGIDDGITAKDSGTLVLVAIAYLVSLVVTGAAQAARVKVTGRIAAWVMNDLRVRVFTQLQRLSLNFYTGEKSGVIMTRMTSDIENLQALLQDGLAQLAVQGLTMVVVTVVLFTFDVRLALITVVLVVPVLTALSVWFHRASGKGYVRVRDTIAAVIADLSESLQGVRIVTAHNRQQHNIEQHRQVTGTYYDANVRTGRINSIYTPSTQVIGVVGQLALLAIGAGMVADGELTIGELVTFLLSLGAFFQPIQQLVQLYNTYQQGQSSIVKLRELLSTRAEVEEAPGAVDLPKVEGEIVFEDVTFGYVPDRPVISEVSLDIRAGETVAFVGPTGAGKSTLAKLVTRFYDPTSGRILIDGRDLRDVRIESLRRQIGVVPQEPFLFAGPLRDNIRFAVPDASDGRVREALRVVGLVDVVERLPDGLDTVVQERGQSLSSGERQLVALARAFLAQPRVLVLDEATSNLDLQSETKIEQALDVLLEGRTAILIAHRLSTAMKADRIVVVDEGRIVEVGAHDQLLAADGKYTQMYAVW 630

[Close]

BLAST of abc transporter vs. nr
Match: gi|644681293|ref|WP_025356613.1| (ABC transporter ATP-binding protein [Kutzneria albida] >gi|578008223|gb|AHH96481.1| ABC transporter ATP-binding protein [Kutzneria albida DSM 43870])

HSP 1 Score: 645.966 bits (1665), Expect = 0.000e+0
Identity = 351/618 (56.80%), Postives = 447/618 (72.33%), Query Frame = 0

Query:   16 ASQTAARNGLPFAGVPSELAEKAKAILETEPEHPKADIHFEQSGVET--TPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASW 631
            A+  A   GLPFAG+P EL +    +L TEPEHP+    F  +  +      +LR  + P+     L  LLVV+ET + QAGP LTQ GID+ I     +AL  + V Y  S+LV  +AS+ R+    R+   +M DLRVRVF+ LQR SLDFFT  KAGV+MTRMTSDI+ L  L QDGLV  A+Q LT+ V+T+V+F     LA I L++VVPA+   S+WF  AS + Y  VRD IA VL++LSESL GVR++TA+NR+  N   H  V   +  ANV  + V + YGP+ + +G++GQ +LL++G  MV DG+L++GEL AFLLYL AFF PIQQLVQLYN+YQQGQ++V K+RGLL TEPSV EA DA +LPP+ G +    V FGY  D PV+ +LDL I  GET+A VGPTGAGKST+AKLVTRFYDP  G V +DGHDLR V + SLR QLGVVPQEPFLF GT+ DNV FA P+A  +++ +A  AVGL +++ R+P+G+D+VV ERG SLSSGERQL+ALARAF+A+PRVLVLDEATSNLD +SET IE ALDV+L+GRTA++IAHRL+TAM+ADRI V+D GR++E G+H +LVAAGG YA MF +W
Sbjct:   12 AATRAGAGGLPFAGIPPELQDGVDKLLATEPEHPEPTARFAHARKDPDGARLSLRRLVRPYWALAALAGLLVVLETAAYQAGPALTQIGIDQGITGHSMTALVVVAVLYLLSVLVTGLASAARVMVTGRIAASVMNDLRVRVFTQLQRLSLDFFTEEKAGVIMTRMTSDIENLQQLVQDGLVQFAIQGLTMAVVTVVLFAYDVKLALITLLLVVPALTAASLWFHSASSKGYLRVRDTIAEVLANLSESLQGVRIVTAHNRQGLNIRRHRQVTGRYLTANVYTAQVNSTYGPSTQVVGVVGQLVLLVLGAGMVADGELTIGELIAFLLYLGAFFQPIQQLVQLYNTYQQGQSSVVKLRGLLGTEPSVPEAADAVDLPPVQGEITFERVGFGYQPDLPVIRELDLEIARGETVAFVGPTGAGKSTLAKLVTRFYDPTQGRVLIDGHDLRGVGIESLRRQLGVVPQEPFLFAGTLRDNVRFALPEAEEEQVWQALRAVGLAEVVERMPNGLDTVVQERGQSLSSGERQLVALARAFLAQPRVLVLDEATSNLDRSSETRIEAALDVLLQGRTALLIAHRLSTAMKADRIVVVDGGRVVETGSHGELVAAGGRYAEMFQTW 629

[Close]

BLAST of abc transporter vs. nr
Match: gi|653090704|ref|WP_027340939.1| (ABC transporter ATP-binding protein [Hamadaea tsunoensis])

HSP 1 Score: 643.269 bits (1658), Expect = 0.000e+0
Identity = 347/614 (56.51%), Postives = 441/614 (71.82%), Query Frame = 0

Query:   23 NGLPFAGVPSELAEKAKAILETEPEHP--KADIHFEQSGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASWDAH 634
             GL FAG+P EL +  + +   E  +P    D  F        P +L +         V   +++++ETL LQAGPLL Q GID+ I PRD   L    VA+  S+  + VASS R+R   R+      DLRVRVF+HLQR SLD+FT+ KAGV+MTRMTSDI++L  L  DGL    +Q LT+VV+T+V+FT +  LA I L++VVPA+ + S+WF+RA+++ Y   RD IA + +DLSESL GVRV+TA +R+  N + H  VV  +RDAN     + A+YGP    IG++G A+LLL+GG+MVLDG+LSVGEL AF+LYL AFFAP+QQLVQLY SYQQG+AAV K+R LL T+P+V E+  A  LPP  G +    VTFGY  D PVL D+ L I PGETIA VGPTGAGKST+AKLV RFYDPQ G V++DGHDLR +T+ SLR Q+GVVPQEPFLF G+I DNVSFARP+AT DEI  A +AVGL +++ R P G+D+ +HERG S+SSG+RQLLALARAF+A PRV+VLDEATSNLDL SE  +ERALD +LEGRTA+++AHRL TAMRADRI V+D G ++E G+H +LV  GG YA M A+W+AH
Sbjct:   30 EGLAFAGIPPELLDGVQKLEAVEARNPLITPDEKFRHVAEVRRPLSLTALAVGRWGLFVSACVMLLLETLLLQAGPLLIQVGIDKGITPRDLPVLIGAAVAFIVSVFASWVASSARMRQTGRLAADATRDLRVRVFAHLQRLSLDYFTSEKAGVIMTRMTSDIESLQNLLSDGLAQFVIQGLTMVVVTVVLFTYNVELALITLLVVVPALTIASLWFRRAADQGYRRQRDAIAAMYADLSESLYGVRVVTAYDRQEQNVVEHRAVVGRYRDANNFTGHISAVYGPGTSVIGLVGMALLLLVGGHMVLDGKLSVGELTAFVLYLNAFFAPVQQLVQLYTSYQQGRAAVVKLRDLLNTQPAVPESASAQPLPPAQGEIVFDDVTFGYLPDRPVLKDVTLTIRPGETIACVGPTGAGKSTLAKLVNRFYDPQSGAVRIDGHDLRDITLASLRRQIGVVPQEPFLFAGSIRDNVSFARPEATDDEIWAAIDAVGLRELVERTPLGLDAPLHERGQSVSSGQRQLLALARAFLAEPRVVVLDEATSNLDLQSELRVERALDRLLEGRTALLVAHRLTTAMRADRIVVVDGGGIVETGSHAELVQRGGAYARMHATWEAH 643

[Close]

BLAST of abc transporter vs. nr
Match: gi|1056202525|ref|WP_067689885.1| (ABC transporter ATP-binding protein [Actinoplanes awajinensis] >gi|973270375|gb|KUL35231.1| ABC transporter ATP-binding protein [Actinoplanes awajinensis subsp. mycoplanecinus])

HSP 1 Score: 641.728 bits (1654), Expect = 0.000e+0
Identity = 343/618 (55.50%), Postives = 440/618 (71.20%), Query Frame = 0

Query:   17 SQTAARNGLPFAGVPSELAEKAKAILETEPEHPKADIHFEQSGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASWDAH 634
            S+   ++G PFAG+P ELA     +  TEPEHPK    F Q   +  P TL S L      LV  A+ V++E L LQAGPLL Q GID  IV RD   L    +A+  ++ +  VAS +RIR + R+      DLRVR+FSHLQR SLDF+T  KAGV MTRMTSD++AL  L Q+G     +Q LT+VV+T V+   +  LAAI L++VVP +  LS+WF++A++  Y   RD IA + S LSESL GVRVITA+N++  + + H  VV G+RDAN     + A+YGP +  IG++G A LLLIGG MVL  +L++GEL AF+LYL AFF P+QQLVQLY +YQQ +AA+ K+RGLL T P V E   A  LPP  G +EL  V+FGY  + PVL D+ L I PGETIA VGPTGAGKST+AKLV R YDP  GTV +DGHDLR VT+ SL  Q+GVVPQEPFLF GT+ DN++FARPDA+  EI  A +AVGL +++ R P G+D+V+HERG S+SSGERQL+ALAR F+A PRV+VLDEATS+LDL SE  +E A+  +L+GRTAI++AHRL+TA RADR+ V+DDG +IE G+H++LVAAGG YAAM+A+W++H
Sbjct:   23 SRKGGQSGTPFAGIPPELAAGVDRLEATEPEHPKPHEPFRQQP-DHRPLTLWSMLANRPAFLVSAAVAVLVEALLLQAGPLLVQVGIDHGIVARDVPVLVGASIAFLVAVGLTAVASGVRIRQSGRLAAYATRDLRVRIFSHLQRLSLDFYTKEKAGVTMTRMTSDVEALQQLLQEGFAQFLIQGLTMVVVTAVLVHYNVELAAITLLLVVPPLAALSIWFRKAADHGYNRQRDAIAALFSHLSESLYGVRVITAHNQQHRSVVGHREVVGGYRDANDHTGRINAVYGPGSSVIGLLGLAALLLIGGRMVLRDELTIGELTAFVLYLNAFFQPVQQLVQLYTNYQQARAALGKLRGLLTTAPGVPEKVSAIALPPASGGIELREVSFGYDSERPVLRDVSLRISPGETIACVGPTGAGKSTLAKLVARLYDPDRGTVLIDGHDLRDVTLDSLHRQVGVVPQEPFLFAGTLRDNIAFARPDASEAEIGAAVDAVGLRELVDRSPGGLDTVLHERGQSVSSGERQLIALARVFVAAPRVVVLDEATSSLDLRSELRVEAAVQRLLDGRTAILVAHRLSTARRADRVIVVDDGGIIESGSHEELVAAGGRYAAMYATWESH 639

[Close]

BLAST of abc transporter vs. nr
Match: gi|1055965968|ref|WP_067503105.1| (ABC transporter ATP-binding protein [Actinoplanes sp. TFC3])

HSP 1 Score: 641.343 bits (1653), Expect = 0.000e+0
Identity = 334/611 (54.66%), Postives = 436/611 (71.36%), Query Frame = 0

Query:   23 NGLPFAGVPSELAEKAKAILETEPEHPKADIHFEQSGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASWDA 633
            NGLPFAG+P +LAE    +   EPEH      F+    +  P T+   LG     LV   + V++ETL LQAGPLL Q GID  I  R+   L    VA+ A++L+  VA+S R+R + R+      DLR+R+F+HLQR SLD++T  KAGV MTRMTSD++AL  L  D      +QALT++V+T V+F  +  LA I L++VVP + +LS+WF+RA+++ Y   RD IA + +DLSESL GVRV+TA+NR+  N I H +VV G+RDAN     + A+YGP + AIG++G A LL  GG MVL G+LS+GEL AF+LYL AFF P+QQLVQ+Y  YQQ  AA+ KI GLL T PSV   P A  LPP+ G + L  ++FGY  D PVL  + L I PGET+A VGPTGAGKST+AKLVTR YDP  G + +DGHDLR VT+ SLR Q+GVVPQEPFLF GT+ DN++FARP+A+  E+  A +AVGL +++ R P+G+ + +HERG S+SSGERQLLALARAF+A PRV+VLDEATS+LDL SE  +E ALD +L+GRTAI++AHRL+TAMRADRI V+D+  ++E GTH++LVA GG YA+M+A+W A
Sbjct:   27 NGLPFAGIPEDLAEGVAKLEAREPEHGDPHTPFDPVADQGGPVTITRLLGGRPRLLVAATVAVLVETLLLQAGPLLVQIGIDHGITGRNLPVLIGATVAFVAAVLLTGVATSARMRQSGRLAASATRDLRIRIFAHLQRMSLDYYTREKAGVTMTRMTSDVEALQSLLSDSFAQFGIQALTMIVVTAVLFHYNAELALITLLLVVPPLTVLSLWFRRAADKGYNRQRDAIAAMFADLSESLNGVRVVTAHNRQERNIIAHRDVVGGYRDANDHTGRINAVYGPGSSAIGLLGMAALLFAGGRMVLRGELSIGELTAFVLYLNAFFQPVQQLVQIYTQYQQAHAAIGKINGLLGTVPSVRSNPGATTLPPVRGEIVLDDLSFGYLPDRPVLEHVTLRIAPGETVACVGPTGAGKSTLAKLVTRLYDPTGGRILIDGHDLREVTLASLRRQIGVVPQEPFLFAGTLRDNIAFARPEASDAEVWAAIDAVGLRELVERSPEGLLTPLHERGQSVSSGERQLLALARAFLAEPRVVVLDEATSSLDLNSELRVEAALDHLLDGRTAILVAHRLSTAMRADRIIVVDERGILESGTHEELVAQGGRYASMYATWAA 637

[Close]

BLAST of abc transporter vs. nr
Match: gi|1254543862|ref|WP_097326037.1| (ABC transporter ATP-binding protein [Actinoplanes atraurantiacus] >gi|1247947498|emb|SNY60504.1| ATP-binding cassette, subfamily B [Actinoplanes atraurantiacus])

HSP 1 Score: 639.802 bits (1649), Expect = 0.000e+0
Identity = 333/612 (54.41%), Postives = 439/612 (71.73%), Query Frame = 0

Query:   23 NGLPFAGVPSELAEKAKAILETEPEHPKADIHFEQSGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASWDAH 634
            +GLPFAG+P +LAE    +   EPEH    + ++    +    ++   L      L+  +L +++ETL LQAGP L Q GID  I  RD   L      + A+IL+  VA+++R+R +  +      DLR+R+F+HLQR SLD++T  KAGV +TRMTSD+++L  L QDG     +Q LT+VV+T V+F  +  LA I LV+VVP + + S+WF+ A++R Y   RD IA + +DL+ESL GVRV+TA+NR+  N + H  VV  +RDAN     + AIYGP    IG+I  A++LL+GG MVL G+L+VGEL AF+LY+ +FF P+QQLVQLY  YQQG+AA+ KIRGLL++EPSV+  P    LPP++G +   GVTFGY  D PVL  +DL I PGET+A VGPTGAGKST+AKLVTRFYDP  G + +DG+DLR VT+ SLR Q+GVVPQEPFLF GT+ DN++FA P AT +E+  A +AVGL D++ R P+G+D+ +HERG S+SSGERQLLALARAF+A PRV+VLDEATS+LDL SE  +E ALD +LEGRTAI++AHRL+TAMRADRI V+DD R+IE G+H +LVAAGG YAAMF +W AH
Sbjct:   27 SGLPFAGIPDDLAEGVAKLESREPEHGDPGVRYDPKRDDGARISIGRLLTGRPGLLLAASLAILVETLLLQAGPYLVQVGIDHGITDRDVRVLIIATACFVAAILLTGVATAVRMRKSGLLAAAATRDLRIRIFAHLQRMSLDYYTREKAGVTLTRMTSDVESLQSLLQDGFAQFLIQGLTMVVVTGVLFHYNAELAIITLVLVVPPLTIASLWFRHAADRGYNRQRDTIAAMFADLAESLNGVRVVTAHNRQERNVVAHREVVGSYRDANDWTGRINAIYGPGTSVIGLIAMAVMLLLGGRMVLRGELTVGELTAFVLYINSFFQPVQQLVQLYTQYQQGKAAIGKIRGLLSSEPSVV--PGTRVLPPVEGEIVFDGVTFGYLPDRPVLQGVDLRIAPGETVACVGPTGAGKSTLAKLVTRFYDPSSGKITIDGYDLRDVTLDSLRRQIGVVPQEPFLFAGTLRDNIAFAGPSATDEEVWAAVDAVGLRDLVERSPEGLDTPLHERGQSVSSGERQLLALARAFLASPRVVVLDEATSSLDLRSELRVEAALDALLEGRTAILVAHRLSTAMRADRIIVVDDHRIIESGSHTELVAAGGAYAAMFETWAAH 636

The following BLAST results are available for this feature:

BLAST of abc transporter vs. L. salmonis genes
BLAST of abc transporter vs. SwissProt
BLAST of abc transporter vs. nr

BLAST of abc transporter vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 18


Match Name	E-value	Identity	Description
EMLSAG00000007660	3.251e-67	32.00	supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 g...	[more]
EMLSAG00000003104	1.088e-56	31.22	supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-...	[more]
EMLSAG00000010048	1.708e-56	40.96	supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1...	[more]
EMLSAG00000011700	1.444e-46	27.33	supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 ...	[more]
EMLSAG00000002221	1.944e-45	28.93	supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 ...	[more]
EMLSAG00000003611	6.547e-43	27.00	supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 ...	[more]
EMLSAG00000004490	6.055e-40	27.48	supercontig:LSalAtl2s:LSalAtl2s2344:77714:79426:-1...	[more]
EMLSAG00000008248	2.021e-38	27.14	supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1...	[more]
EMLSAG00000001655	1.813e-35	32.92	supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487...	[more]
EMLSAG00000000752	4.449e-30	38.17	supercontig:LSalAtl2s:LSalAtl2s111:55855:93761:1 g...	[more]

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BLAST of abc transporter vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|81815540\|sp\|O31708.1\|YKNV_BACSU	3.543e-126	36.81	RecName: Full=Uncharacterized ABC transporter ATP-...	[more]
gi\|122064528\|sp\|Q2LVL0.1\|MSBA_SYNAS	2.202e-104	32.61	RecName: Full=Lipid A export ATP-binding/permease ...	[more]
gi\|81816277\|sp\|O53645.1\|MDREP_MYCTU	2.710e-98	36.93	RecName: Full=Multidrug efflux ATP-binding/permeas...	[more]
gi\|817033881\|sp\|A1KF14.1\|MDREP_MYCBP	2.710e-98	36.93	RecName: Full=Multidrug efflux ATP-binding/permeas...	[more]
gi\|1176951\|sp\|P45861.1\|YWJA_BACSU	5.632e-98	31.97	RecName: Full=Uncharacterized ABC transporter ATP-...	[more]
gi\|7388395\|sp\|Q9WYC4.1\|Y288_THEMA	2.749e-95	31.90	RecName: Full=Uncharacterized ABC transporter ATP-...	[more]
gi\|1723607\|sp\|P54719.1\|YFIC_BACSU	3.972e-95	30.97	RecName: Full=Uncharacterized ABC transporter ATP-...	[more]
gi\|81827826\|sp\|Q6G868.1\|Y1788_STAAS	3.108e-93	31.84	RecName: Full=Putative multidrug export ATP-bindin...	[more]
gi\|221222997\|sp\|P71082.2\|YGAD_BACSU	3.454e-93	31.48	RecName: Full=Putative multidrug export ATP-bindin...	[more]
gi\|121957837\|sp\|Q2YU20.1\|Y1799_STAAB	2.250e-92	31.67	RecName: Full=Putative multidrug export ATP-bindin...	[more]

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BLAST of abc transporter vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|503814987\|ref\|WP_014048981.1\|	0.000e+0	56.93	MULTISPECIES: ABC transporter ATP-binding protein ...	[more]
gi\|655407634\|ref\|WP_028806437.1\|	0.000e+0	54.01	ABC transporter ATP-binding protein [Streptomyces ...	[more]
gi\|739800891\|ref\|WP_037652878.1\|	0.000e+0	56.56	ABC transporter ATP-binding protein [Streptomyces ...	[more]
gi\|663326435\|ref\|WP_030326248.1\|	0.000e+0	56.89	ABC transporter ATP-binding protein [Streptomyces ...	[more]
gi\|499292544\|ref\|WP_010983802.1\|	0.000e+0	56.44	ABC transporter ATP-binding protein [Streptomyces ...	[more]
gi\|644681293\|ref\|WP_025356613.1\|	0.000e+0	56.80	ABC transporter ATP-binding protein [Kutzneria alb...	[more]
gi\|653090704\|ref\|WP_027340939.1\|	0.000e+0	56.51	ABC transporter ATP-binding protein [Hamadaea tsun...	[more]
gi\|1056202525\|ref\|WP_067689885.1\|	0.000e+0	55.50	ABC transporter ATP-binding protein [Actinoplanes ...	[more]
gi\|1055965968\|ref\|WP_067503105.1\|	0.000e+0	54.66	ABC transporter ATP-binding protein [Actinoplanes ...	[more]
gi\|1254543862\|ref\|WP_097326037.1\|	0.000e+0	54.41	ABC transporter ATP-binding protein [Actinoplanes ...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold11167_size2062	supercontig	scaffold11167_size2062:67..1974 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold11167_size2062-processed-gene-0.0-mRNA-1	snap_masked-scaffold11167_size2062-processed-gene-0.0-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold11167_size2062:67..1974+

gene from alignment at scaffold11167_size2062:67..1974+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold11167_size2062-processed-gene-0.0 ID=snap_masked-scaffold11167_size2062-processed-gene-0.0|Name=abc transporter|organism=Tigriopus kingsejongensis|type=gene|length=1908bp|location=Sequence derived from alignment at scaffold11167_size2062:67..1974+ (Tigriopus kingsejongensis)
ATGAGCTTCGGTCCTCCAGCCGGTTCACCGTTCTCCGGGCCCTCGGCCTC
GCAGACCGCCGCTCGAAACGGTCTGCCGTTCGCCGGCGTGCCGAGCGAGT
TGGCCGAGAAGGCCAAGGCGATTCTCGAGACCGAACCCGAGCATCCCAAG
GCCGACATCCACTTCGAGCAGTCCGGCGTCGAGACGACCCCGTTCACCCT
CCGCTCGTTCCTCGGCCCGCACCGCAACAAGCTGGTGCTCGTCGCCCTGC
TCGTGGTGATCGAGACACTCTCGCTCCAGGCAGGCCCGCTGCTGACGCAA
CGAGGGATCGACCGGGCCATCGTGCCTCGCGATTCCTCGGCCCTGTGGTG
GATCGGCGTGGCCTACGCCGCGTCGATCCTGGTCAACCTCGTGGCGTCGT
CGATCCGGATCCGATTCGCCAACCGGGTCGGTGAAGGCCTGATGTACGAC
CTCCGGGTCCGAGTCTTCTCACACCTGCAGCGCCAGTCGCTCGACTTCTT
CACCACGTCGAAGGCCGGCGTGTTGATGACCCGGATGACCTCCGACATCG
ACGCACTCACGGTGCTGTTCCAAGACGGGCTCGTCAATCTCGCCGTGCAG
GCCCTGACCCTCGTGGTCATCACGATCGTGATGTTCACGCTCAGCCCCAC
CCTGGCGGCGATCCTGCTGGTCATCGTCGTGCCGGCGATGTTGCTGCTCA
GCGTGTGGTTCAAGCGGGCATCCGAGCGCAACTACGCCCTGGTCCGAGAC
AAGATCGCGCTCGTGCTGTCGGACCTCTCCGAGAGCCTGGCCGGTGTCAG
AGTCATCACGGCGAACAACCGTCGCCGTCACAACAACATCCATCACGCCA
ACGTGGTCAACGGGCACCGCGATGCGAATGTGCGAGCCTCGACCGTCGGT
GCCATCTACGGGCCTGCCAACGAGGCGATCGGCATCATCGGGCAGGCGAT
GCTGCTGCTCATCGGCGGCAACATGGTGCTCGACGGTCAGCTCAGCGTCG
GCGAGCTGTTCGCCTTCCTGCTGTACCTCACCGCCTTCTTCGCCCCCATC
CAGCAGCTGGTGCAGCTGTACAACTCCTATCAGCAGGGGCAGGCTGCCGT
CACCAAGATCCGGGGCCTGTTGGCGACCGAGCCGAGCGTGTTGGAAGCGC
CCGATGCCTACGAGCTGCCCCCGATCGACGGGCGGCTGGAGCTGTCGGGT
GTCACGTTCGGGTACTCCGACGATGAGCCGGTGCTCTTCGACCTCGACCT
GGTGATCGAACCGGGCGAGACCATCGCCGTCGTTGGGCCGACCGGAGCGG
GCAAGTCCACCGTCGCCAAGCTGGTCACCCGGTTCTACGACCCGCAGGTG
GGAACCGTGAAGCTCGACGGCCACGACCTCCGAGCGGTGACCGTCCACTC
GTTGCGCTCCCAGCTCGGTGTGGTGCCCCAGGAACCGTTCCTGTTCAACG
GGACCATCGGCGACAACGTCTCGTTCGCCCGGCCCGATGCCACCGCCGAC
GAGATTCTCGAAGCGTGTGAGGCGGTCGGTCTCACCGACATGTTGAGCCG
TCTGCCCGACGGGGTCGACAGCGTCGTCCACGAGCGTGGCTCGTCGCTCT
CGAGCGGTGAGCGTCAGCTGCTGGCCCTGGCTCGGGCGTTCATGGCCCGA
CCCCGGGTGTTGGTGCTCGACGAAGCGACCTCGAACCTCGACCTGGCGTC
GGAGACCATCATCGAACGAGCCCTCGACGTGGTGCTCGAAGGCCGCACGG
CGATCGTGATCGCCCACCGGTTGGCCACCGCGATGCGAGCCGACCGGATT
GCCGTGATCGACGACGGCCGCCTCATCGAACTCGGCACCCACGACGACCT
GGTCGCAGCCGGCGGCCACTACGCCGCCATGTTCGCCAGCTGGGACGCCC
ACCAGTAG

Synonyms

The feature 'abc transporter' has the following synonyms


Synonym
Tk01906

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