abc transporter, snap_masked-scaffold11167_size2062-processed-gene-0.0 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000007660 (supercontig:LSalAtl2s:LSalAtl2s445:12562:17493:1 gene:EMLSAG00000007660 transcript:EMLSAT00000007660 description:"maker-LSalAtl2s445-augustus-gene-0.18") HSP 1 Score: 231.491 bits (589), Expect = 3.251e-67 Identity = 160/500 (32.00%), Postives = 272/500 (54.40%), Query Frame = 0 Query: 143 VGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQ----DGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLL----LSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDAN-VRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELP--PIDGRLELSGVTFGYSD--DEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVG-TVKLDGHDLRAVTVHSLR-SQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAM 627 +GE + LR +F+ + Q + FF K G +++R+++D+ F+ GL + A QA +V M+ +SP + + + VIV P ++L + + + S++ A V A+ E ++ +R + ++ V+ RD N +G G +N + I + GG ++ D L+ G+L +FL+ + I Q+ L+ +G A+ ++I + P ++ ++P G +E +TF Y ++ VL D L I P +T+A+VG +G GK+T+A L+ RFYD G ++++DG ++R + LR S +G + QEP LF ++ +N+ + RP+AT +E+ EA +A + D + PDG +++ ERG ++S G++Q +A+ARA + P +L+LDEATS LD SE I++ ALD + +GRT++VIAHRL+T AD IAVID G + E+GTH L GG Y+ + Sbjct: 180 LGERMAASLRKDLFNSIICQDIAFFDEHKTGEIVSRLSADVQEFKSSFKLVISQGLRSSA-QASGCIV---SMYMISPQMTSAMGVIV-PTVILGGTYIGSYLRVLSKKAQAQVAKATAVG----EECISNIRTVRGFAMEDAEMELYSREVDKTRDFNEALGLGIGVFQGASNFFLNSIVLGTITY-GGYLMSDDNLNPGQLMSFLVSVQTIQRSITQVSLLFGHLVKGMASGSRIFEYIEKVP-LIPISGGVKIPYHSFFGDVEFKNITFSYPTRPEQAVLKDFSLRIPPSKTVALVGTSGGGKTTIAALLERFYDINGGGSLEIDGINIRDLDPSWLRGSAIGYINQEPVLFATSVIENIRYGRPNATDNEVYEAAKAAHVDDFVRTFPDGYSTILGERGVTVSGGQKQRIAIARALLKNPPILILDEATSALDAESERIVQEALDKLSKGRTSLVIAHRLSTIKNADVIAVIDKGVMAEIGTHAALKRKGGIYSRL 668
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003104 (supercontig:LSalAtl2s:LSalAtl2s174:364234:370462:-1 gene:EMLSAG00000003104 transcript:EMLSAT00000003104 description:"maker-LSalAtl2s174-augustus-gene-3.18") HSP 1 Score: 206.068 bits (523), Expect = 1.088e-56 Identity = 113/362 (31.22%), Postives = 203/362 (56.08%), Query Frame = 0 Query: 261 ESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPI----DGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLV 618 +SL + N + + + + A+++ + ++ AI + + ++++ + +G L+VG+L L P+ L +Y +Q + + L+AT + + A E+ I D + V FGY+ D+ + L +E G+TIA+VG +G+GKST+ +L+ RFY+PQ+G++K+ +++ VT+ SLR Q+ +VPQ+ LFN TI N+ + + + +++ + + + + + P G + V ERG LS GE+Q +A+ARA + +++ DEATS+LD +ET+I +AL V G+TAI+IAHRL+T + AD I V+ +G++IE GTH++L+ Sbjct: 225 DSLINYETVKYFNNEAYECQQYDKSLLKYETASLKTTESLSLLNFGQNAIFSVALSAIMMMAAKDISNGALTVGDLIMVNGLLFQLSLPLNFLGSVYREIRQSLIDMQVMFQLMATPSKITSSKGATEINFINNMEDASITFDDVKFGYNIDKNIANGLSFSVESGKTIAIVGESGSGKSTLVRLLYRFYEPQLGSIKIGNYNINEVTLDSLRRQISIVPQDCVLFNDTIFHNIKYGNLNCSDEDVYKVAKLAEIDNAIRSWPQGYLTQVGERGLKLSGGEKQRVAIARAALKDSPIIIFDEATSSLDSITETMIMKALKRVTSGKTAIIIAHRLSTVVHADEIFVLSNGKVIERGTHEELL 586
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000010048 (supercontig:LSalAtl2s:LSalAtl2s662:116216:125875:1 gene:EMLSAG00000010048 transcript:EMLSAT00000010048 description:"snap_masked-LSalAtl2s662-processed-gene-1.13") HSP 1 Score: 203.371 bits (516), Expect = 1.708e-56 Identity = 102/249 (40.96%), Postives = 152/249 (61.04%), Query Frame = 0 Query: 390 PPIDGRLELSGVTFGYSDDE--PVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILE-ACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVA-AGGHYAAMFASWDAH 634 PP GR+ V F Y VL L PG+T+A+VGP+G GKSTV +L+ RFYDP G V +DG D+ + H LRS +G+V QEP LF +I +N++ ++++++ C+A D + RLP D++V E+G+ LS G++Q +A+ARA + P +L+LDEA+S LD SE I++ ALD +GRT I++AHRL+T AD I V+ DG ++ GTH+ L + G Y ++ + D Sbjct: 239 PPFTGRITFKNVHFEYPSRPTVKVLSGLSFEASPGKTLALVGPSGCGKSTVIQLIQRFYDPSFGVVSIDGEDITTLDPHWLRSHIGIVGQEPVLFEYSIKENITMGLQGEISEKMIDDTCKAANAYDFIQRLPKKYDTIVGEKGALLSGGQKQRIAIARALIRNPSILLLDEASSALDSQSEFIVQSALDKARKGRTTIIVAHRLSTIRSADAILVMKDGYRVDYGTHESLKSNKTGLYCSLVNAQDCQ 487
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000011700 (supercontig:LSalAtl2s:LSalAtl2s812:79332:86643:-1 gene:EMLSAG00000011700 transcript:EMLSAT00000011700 description:"maker-LSalAtl2s812-augustus-gene-0.6") HSP 1 Score: 176.792 bits (447), Expect = 1.444e-46 Identity = 135/494 (27.33%), Postives = 250/494 (50.61%), Query Frame = 0 Query: 155 VFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTV-----LFQDGLVNLA-VQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANN---------RRRHNNIHHAN--VVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELP---------PIDGRLELSGVTFGYSDD-EPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATAD--EILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVA 619 +F + + + FF T+ G ++ R DI+ L +F A + +T++ I + +F + PTLA ++ V+ L++S+ R +R ++ I S E+L+G+ + A + RR + N V+ R +R + +G I A+ ++ + + GQL + + L +T+ + + +++Y+ + AV +I+ E S E+ +EL P+ G + + ++ Y D + VL D+++ I PG+ I +VG TG+GKST+A + R + G + +DG D++ + +H+LRS+L ++PQ+P LF+GT+ N+ P E++E+ + L D L DG+D V+ E G ++S G+RQL+ LARA + + +VL++DEAT+ +D ++ +I++A+ T + IAHRL T + +I VID G +IE + +L++ Sbjct: 1509 LFQCIIKTPMSFFDTTPLGRILNRFGQDIEVLDTKMSFCIFGSMTGTFAYIATVTIISINVPIFII-PTLAIFVVYFVI---LIVSLSSSRQLKRLSSVATSPI---YSHFGETLSGINTVRAYSLEKAFYSEFERRLDEYQKRNFPVIMADRWLGIRINLIGNFI--------IFASALFSVLSRDTITPGQLGLN--VSSSLAITSILSWV---IRMYSDLENNIVAVERIK-----EYSNKESEAPWELEEDLKLNSSWPLKGEITIKNLSLKYRKDLDWVLRDINVHISPGDKIGIVGRTGSGKSTLALALFRLLEVNSGQITIDGVDIKKMGLHTLRSKLTIIPQDPTLFSGTLRLNLD---PFGLFKDMELIESLKHAYLQDFLKE--DGLDKVIAENGENISLGQRQLICLARALLRKNKVLIMDEATAAVDSETDKLIQKAIKDNFRDSTVLTIAHRLQTVLDYSKIIVIDSGCIIEYDSPKNLLS 1972 HSP 2 Score: 88.9669 bits (219), Expect = 2.166e-18 Identity = 63/231 (27.27%), Postives = 112/231 (48.48%), Query Frame = 0 Query: 409 EPVLFDLDLVIEPGETIAVVGPTGAGKST-VAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARP--DATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLD------LASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFAS 630 E + D+ + + G IA++GP G+GKS+ ++ L+ GT ++ H A T PQ ++ N ++ DN+ F R DE+L+AC L + P G + + E+G +LS G++Q ++LARA ++ + LD+ + +D L E I L L G+T I++ H L+ D I + DG + E GT+ +L+ ++ + ++ Sbjct: 1161 ESLFKDISMDVNRGNLIAIIGPVGSGKSSLISALLGEMLFTSKGTNPVEIHGSVAYT-----------PQNAWMQNVSVKDNILFGRKFNKNWYDEVLKACS---LESDMEXFPSGDSTEIGEKGINLSGGQKQRISLARAVYSQSDIYFLDDPLAXVDSHVAKHLFEEVIGSNGL---LRGKTRILVTHNLSFLHLVDEIYFLKDGEITEKGTYKELMEKNCDFSELISN 1374
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000002221 (supercontig:LSalAtl2s:LSalAtl2s1420:21426:31801:1 gene:EMLSAG00000002221 transcript:EMLSAT00000002221 description:"maker-LSalAtl2s1420-augustus-gene-0.12") HSP 1 Score: 172.94 bits (437), Expect = 1.944e-45 Identity = 140/484 (28.93%), Postives = 234/484 (48.35%), Query Frame = 0 Query: 151 LRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWF---------KRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIG--IIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATE---PSVLEAPDAYELPPIDGRLELSGVTFGYSDD-EPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVA 619 L ++ + + + FF T+ G ++ R+ D+D L + L L ++ IV+ +P V ++PA L++ +F R +R + R I S SE+++G I A + + V+ ++ AN A+ E +G I+ A LL + G LS G + + Y A A + LV++ + + AV +I+ E P ++E E P G + + Y + + VL ++ L IE GE I +VG TGAGKS+ + R +P G + +DG D+ + +H LRS++ ++PQ+P LF+G++ N+ + I+EA L + L DG++ V E G +LS G+RQL+ LARA + R RVL+LDEAT+ +DL ++ +I++ + + T I IAHRL T M +I V+ +G +E GT +L+A Sbjct: 1075 LHNQMLESILKSPMSFFDTTPQGRILNRLGKDLDVLDSVMPMVLRGWISCFLGVLSSLIVVMVTTP-------VFIIPASLIIICYFFIQRIYVATSRQLKRLESSSRSPIX---SFFSETVSGAATIRAYGQSSTFISESESKVDDNQKANFPATVSNRWLAVRLEVVGNLIVFTAALLAVLGR----DSLSPGLVGLSVSYALAVTASLNWLVRMASEVETNIVAVERIQEYTKAEKEAPWIIEDTKPDEDWPRKGEISFKNYSTRYREGLDYVLKNVSLDIEGGEKIGIVGRTGAGKSSFTLSMFRIIEPVTGNIIIDGVDITKLGLHQLRSRITIIPQDPVLFSGSLRRNLD-PLDEYNETNIMEAISHSHLKPFIDSLKDGLEYHVSEGGENLSLGQRQLICLARALLRRTRVLILDEATAAVDLETDNLIQKTIRSEFKDSTVITIAHRLNTIMDYSKILVLKNGERVEYGTVAELLA 1543 HSP 2 Score: 98.2117 bits (243), Expect = 2.282e-21 Identity = 130/598 (21.74%), Postives = 261/598 (43.65%), Query Frame = 0 Query: 54 HFEQSGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVN-LVASSIRIRFANRVGEGLMY----DLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTS--DIDALTVLFQDGLVNLAVQALTLVVITIVMF--TLSPTLAA--ILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRAST-VGA-------IYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDG---RLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDL-ASETIIERALDV---VLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYA 625 H ++ + P R+F GP +L A ++ I + SL P L + R I + W G+ YA + + V S + +F + MY ++ + S + R++L T++K + + + +DA ++ +N A + I I + TL P++ A +++++++P ++ K ++I L L+E + G++++ + ++++ R V+ T +G I+ A + ++ A +L VLD + + F L P+ L + S ++ +I + +E EA + P D LE + + + +D+ +L D+ L IE G +AVVG G+GKS++ + D G + ++R + Q+ ++ N ++ +N+ F + D+ EA L L LP G ++ + E+G +LS G++Q ++LARA + + +LD+ S +D + I + + +L+ +T +++ H + D+I V+ DGR+ E+GT+ +L+ G +A Sbjct: 299 HEKKPQLSILPALARTF-GPS----ILSAAVIKIVSDSLNFVPPLI---LKRIIKFSTNQEELWKGILYAVILFASSTVGSLVLSKFFYK-----MYVVGMKIKTSLISTIYRKALRVPTSTKKNISTGEIVNLMSVDAQKIVDLMPYINTVWSAPFQITIAIYLLWQTLGPSVLAGVLVMILLIPFNGFIASRTKTLQTNQMKEKDERIKL----LNEVVQGIKIVKLYAWEQS----FLDIISNVRSKEVKILTHIGYLQAGNSFIWTCAPFLVSLVTFATFILSSPENVLDSE----KAFVCLTLFNILRFPLSMLPMIIGSMVLAGVSIKRINKFMNSEEIDEEAVEKKTAYPDDKFAINLEKACLKWESDEDKNILSDVSLDIEVGSLVAVVGTVGSGKSSLLSAILGEMDKVSGLI-------------TVRGSIAYGAQQAWVLNTSLKNNILFNK-SYDGDKYTRIVEACALKSDLDMLPGGDETEIGEKGINLSGGQKQRVSLARAVYSGSDIYLLDDPLSAVDSHVGKHIYDNVISSSSGILKDKTRVMVTHGVTYLPFTDKIIVMKDGRVSEIGTYKELLRQKGAFA 857
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000003611 (supercontig:LSalAtl2s:LSalAtl2s197:49356:53594:-1 gene:EMLSAG00000003611 transcript:EMLSAT00000003611 description:"augustus_masked-LSalAtl2s197-processed-gene-0.4") HSP 1 Score: 165.236 bits (417), Expect = 6.547e-43 Identity = 128/474 (27.00%), Postives = 231/474 (48.73%), Query Frame = 0 Query: 154 RVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWF--KRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIG---IIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIR---GLLATEPSVLEAPDAYELPPIDGRLELSGVTFGY-SDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATAD-EILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDL 617 + + + R + FF ++ G ++ R + DI + + + I I++ ++ P L + +L+ +++ R +R ++ R I S SESL G+ I A + + N ++ ++ N + E IG I G A+L + +V G+ VG + ++ L LT + L + + + AV +++ GL + L +Y P G++E + Y ++ + VL ++ I GE + +VG TGAGKS+++ + R + G + +DG D+ + +H LR L V+PQEP LF+GT+ N+ +A +D +I +V L + + L DG++ + E G +LSSG+RQL+ LARA + ++L+LDEAT+ +D ++ I+ + T + IAHRL T + D+I V+D G +IE G+ ++L Sbjct: 918 QTYDRIMRAPISFFDSTPQGRILNRFSKDISICDNILGSNIRQWLXCLFXFLGIVILIVSVLPLFLLFALPTSLVFILIQNIYVASSRQLKRLQSVTRSPI---YSHFSESLNGLSSIRAYGAQSKFILESINKIDTNQRCNYPSIIANRWLAMRLETIGNLCIFGXAILTMTNPELVGPGK--VGLVISYALILTQ---NLNWLXRQTSEIETNIVAVERLKEYAGLDIEKEWRLHKDTSYNWPS-QGKVEFKNYSLRYKANSDLVLKKINFTIFGGERVGIVGRTGAGKSSLSVALFRIVEAANGQILIDGKDISTLGLHDLRESLTVIPQEPLLFSGTLRSNLD--PENAFSDHDIWNTLGSVHLKEYIRDLKDGLNHSISEGGLNLSSGQRQLMCLARALLRSCKILILDEATAAVDWETDEKIQETIRCYFPSCTILTIAHRLKTIIDYDKILVLDKGTVIEFGSPNEL 1380 HSP 2 Score: 95.5153 bits (236), Expect = 1.508e-20 Identity = 65/225 (28.89%), Postives = 117/225 (52.00%), Query Frame = 0 Query: 402 TFGYS--DDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARP--DATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLD-LASETIIERALDV---VLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLV 618 F +S D E L +++L I+ G A+VG G+GKS++ + + G V++ G Q+ VPQE ++ N ++ +N+ F +P + +++LE C LT LS LP G ++ + ERG +LS G+RQ ++LARA + V + D S LD +++ L+ +++ +T +++ H ++ IAV+ G +I GT+ +L+ Sbjct: 559 NFKWSTEDSENTLSNINLRIKHGSLTAIVGTVGSGKSSLISAILGEMVKKSGKVRIKG-------------QIAYVPQESWMQNTSLKNNILFGKPYDEEWYNQVLEYC---CLTYDLSLLPAGDETEIGERGINLSGGQRQRISLARAIYSDADVYIFDNPLSALDSQVGKSVFNNVLNNNTGIIKDKTRLLVTHGISYLPHVHHIAVMLKGEIIHEGTYQELL 767
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000004490 (supercontig:LSalAtl2s:LSalAtl2s2344:77714:79426:-1 gene:EMLSAG00000004490 transcript:EMLSAT00000004490 description:"maker-LSalAtl2s2344-augustus-gene-0.12") HSP 1 Score: 151.754 bits (382), Expect = 6.055e-40 Identity = 119/433 (27.48%), Postives = 210/433 (48.50%), Query Frame = 0 Query: 136 RIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITI----VMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELP-PIDGRLELSGVTFGYSD--DEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATA-DEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEAT 560 R+ G+ + +R R+FS + +Q FF T+K G L+ R++SD ++L L + + ++ + +M +SP LA + L VVP + +VW + + ++ +A E +A +R + A + ++ + ++ D V+ + + A + G + ++ GG +V ++VG L +F+LY + + Y + A T+I ++ + + LP P++G + V F Y D + L+L IE + +A+VG KST+ L+ R YDP +G V +DG D+R + LR+Q+G+V QEP LF+GTI +N+ + +EI+ A + D + PD D++V ERG LS G++Q +A+A A + P+ L+LDEAT Sbjct: 54 RVYLIQLSGQRITARIRSRLFSSITKQETAFFDTNKTGELVNRLSSD----SMLVSQALTSQISSGMRSSIMALAGGGMMLFMSPQLALVGLS-VVPPVAGWAVWMGKKVKNISHEYQNTLADATHLAQERIANIRTVRAFGKEVQESMAYDEKMSLVLDKGVKEALIQAKFYGMTGXTGNLIILSVMFYGGFLVTQDVITVGNLTSFILYSGYVGIGLNGVSSFYAEIMKALGAATRIWEIM-DRTTHMPLDTGLILPMPLNGHITFEKVGFSYPSRPDHSIFDGLNLNIESKQILAIVGS----KSTLTSLLLRLYDPNMGRVCIDGTDIRELNTTWLRNQIGIVMQEPVLFSGTIKENILYGTEGKIEHEEIVSAAKESNAHDFIMNFPDRYDTLVGERGVLLSGGQKQRVAIAXAILKNPQXLILDEAT 476
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000008248 (supercontig:LSalAtl2s:LSalAtl2s498:229862:245360:1 gene:EMLSAG00000008248 transcript:EMLSAT00000008248 description:"maker-LSalAtl2s498-snap-gene-2.25") HSP 1 Score: 151.754 bits (382), Expect = 2.021e-38 Identity = 133/490 (27.14%), Postives = 232/490 (47.35%), Query Frame = 0 Query: 154 RVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFK--RASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVN-----------GHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELP--------PIDGRLELSGVTFGYSDD-EPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARP-DATAD-EILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVA 619 ++ ++ R L FF T+ G ++ R + DID + + Q+ ++ +++ P I+L V+ L+ + R +R ++ R I S +E+L G+ I A H + N ++ R VR T+G I +I A+ + G VG ++ L +T + L+ + + +V +I+ E EAP Y+LP P G ++ Y + VL ++ I+ GE I +VG TGAGKS++ + R +P G++ +DG ++R + + LRS++ ++PQ+P LF+G++ N+ P +A AD +I A E L + L DG++ V E G +LS G+RQL+ LARA + + ++LVLDEAT+ +DL ++ +I+ + + T + IAHR+ T M ++RI V+D G + E +L+A Sbjct: 1038 KLLENVLRAPLSFFDTNPLGRILNRFSKDIDVAXTTLPFNIRMMIAQSFNVLGTIVIICIALPWFFVIILPAVICYALIQKFYISCARQVKRIESISRSPI---YSHFAETLTGIPTIRAFGMVHHFIDENVNKIDFNAKCYFPTVISSRWLAVRLETLGNIL--------VIFVALFSITSRGTTDPGM--VGLSLSYALSVTTI---LNMLITVSTDVETNMVSVERIK---EYENIPQEAP--YDLPNSDPPPNWPEHGVIKFDNYKTRYRKGLDLVLKGINCTIQKGEKIGIVGRTGAGKSSLTLALFRIIEPSEGSIYIDGENIRFLGLGKLRSRITIIPQDPILFSGSLRMNLD---PFEAFADRDIWIALEYSHLKSFVWNLGDGLNFSVLEGGRNLSVGQRQLICLARAILRKTQILVLDEATAAIDLETDDLIQSTIRSEFKDSTVLTIAHRINTIMDSNRIMVLDAGTIAEFDDPQNLLA 1503 HSP 2 Score: 86.6557 bits (213), Expect = 1.014e-17 Identity = 65/245 (26.53%), Postives = 121/245 (49.39%), Query Frame = 0 Query: 396 LELSGVTFGYSDDEPV--LFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFAR--PDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDL-ASETIIERALDV---VLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLV-AAGGHYAAMFASW 631 +++ V+ + DE + L D+DL IE G +A+VG G+GKS++ + + G++ +DG + A PQ+P+L N T+ +N+ F + +++AC L+ L LP G + + ERG +LS G++ ++LAR + +LD+ S +D+ + E + +L+ +T I + H + D+I V+ +G + E GT+ DL+ G +A ++ Sbjct: 617 VKMCNVSLSWETDEGLNTLEDIDLDIEKGSLVAIVGQVGSGKSSLLSGILGEMEIVRGSINVDGQTIYA-------------PQQPWLQNETLRNNILFGKRFNKKLYRRVIDAC---ALSPDLDMLPAGDLTEIGERGINLSGGQKARVSLARCTXNNGDIYILDDPLSAVDVHVGRHLFENVISSQTGLLKNKTRIFVTHGAIFLPQTDKIIVMKNGVISESGTYRDLIEKENGEFAQFLINY 845
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000001655 (supercontig:LSalAtl2s:LSalAtl2s128:1836948:1854487:1 gene:EMLSAG00000001655 transcript:EMLSAT00000001655 description:"augustus_masked-LSalAtl2s128-processed-gene-18.4") HSP 1 Score: 142.51 bits (358), Expect = 1.813e-35 Identity = 80/243 (32.92%), Postives = 136/243 (55.97%), Query Frame = 0 Query: 380 VLEAPDAYELPPIDGRLELSGVTFGYSDDEP-VLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRL-PDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAA 620 VL P + P G +E + Y D P VL ++ +P E I +VG TGAGKS++ + R G + +DG +R + + R Q V+PQ+PF+F+GTI N+ + E+ ++ + L +++ G+D+++ + G SLS G++QLL LARA + +V+ +DEAT+++D ++ +I L +T I IAHR+ T + +DRI V+ +G++IE G +DL+ + Sbjct: 1205 VLNMPYNW---PNQGVVEFKDIRLRYKDHLPYVLNKVNFKTKPKEKIGIVGRTGAGKSSLIAALFRLSSFSHGEIMVDGIRIRLLPLIDFRRQFAVIPQDPFIFSGTIRQNLD-PYAQHSDQELWDSIKLSYLYNIIYSFGSSGLDTLIGDGGKSLSIGQKQLLCLARAIITSAKVVFIDEATASVDKETDRLIRNVLKTAFNDKTVITIAHRIETVLNSDRIFVMSNGQIIEEGKPEDLIKS 1443 HSP 2 Score: 75.485 bits (184), Expect = 2.410e-14 Identity = 119/609 (19.54%), Postives = 241/609 (39.57%), Query Frame = 0 Query: 52 DIHFEQSGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVN-LVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDF----FTTSKAGVLMTRMTSDIDALTVL---FQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVIT----------ANNRRRHNNIHHANVVNGHRDANV--------------RASTVGAIYGPANEAIGIIGQAMLLLIGG---------NMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARP--DATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDL-ASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRL--IELGTH 614 D F +S V + + ++ + + + ++ + +S PLL R + P+ + L W G YA S+ V+ + + +F ++ E L +R V L +Q+L G ++ M+ D+D + F +L Q + + + +S + ++++P +++ S + D++ ++ +E + G+RVI N R+N I++ + DA +T A+ P A A+ ++ G N +++ +S+ L FL P ++ + Y+ +K E + PD +++ +FG++ D L ++D+ I+ E + V+GP G+GK+T + + Q G ++V S + V Q P++ N +I DN+ F ++++AC L L G ++ E+G++LS G++ +ALARA + ++D+ S+LD+ + + +L+ +T I+ H A+ + I DG ++ TH Sbjct: 283 DFEFHKSRVRSLQWFRKALSSKFLKEFLCIGMIKFVADVSGFFCPLLLNRLVKFMEDPK--ADLRW-GYFYAFSLFVSTFLVAICNTQFNFKMNE-LGLKVRASVIQSLYKQTLSVSEANLNKYSRGEIINFMSIDVDRVVNFAPSFH-AFWSLPFQMVVTLYLLHQQVGVSSFVGVGFAILMIPINKVIATKIGSLSGHMMSAKDDRVKII----AEIIEGIRVIKYYCWESFFTDKTNSHRNNEIYYLKW-RKYLDAVCVYLWASTPVIISVSTFATYSALGNPLTAAKVFTSMALFAMLSGPFNAFPFVINGLIEANVSIKRLARFLS------LPSINRIKYFTEYKDENTKASK-----EIETKI---PD----------IQIMEASFGFTKDCFTLRNIDVSIKRQEFVGVLGPVGSGKTTFLNAILGELEKQSG----------KISVRDPLSGIAYVQQVPWIQNKSIRDNILFGEMYIHGKYTKVIKAC---CLDHDFKHLHRGDHTIAGEKGAALSGGQKARIALARAIYQDKDIYLIDDVFSSLDVNVGYKVYTEVMLNLLKRKTRILCTHNPQYINDANIVIKIKDGEFESVKQSTH 844
BLAST of abc transporter vs. L. salmonis genes
Match: EMLSAG00000000752 (supercontig:LSalAtl2s:LSalAtl2s111:55855:93761:1 gene:EMLSAG00000000752 transcript:EMLSAT00000000752 description:"maker-LSalAtl2s111-augustus-gene-1.10") HSP 1 Score: 125.946 bits (315), Expect = 4.449e-30 Identity = 71/186 (38.17%), Postives = 113/186 (60.75%), Query Frame = 0 Query: 391 PIDGRLELSGVTFGYSDDEP-VLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERAL 575 P G +E S V+ YS +P VL L+ E I ++G TGAGKS++ + R +P+ G + +DG D+ V + +R ++ ++PQ+P LFNG+I N+ + T +I A E L D++ L G+DSVV E GS+ S G+RQL LA A + R +VL++DEAT+N+D ++++I+ A+ Sbjct: 45 PDKGVVEFSNVSMRYSQHQPNVLKGLNFKTNSFEKIGIIGRTGAGKSSIISALFRLAEPE-GEIFIDGLDICKVGLLDIRKKISIIPQDPILFNGSIRKNLD-PFNEFTDVQIWNALEQAKLYDIVVDLGHGLDSVVLEFGSNFSVGQRQLFCLAXAILRRNKVLIMDEATANVDPFTDSLIQEAI 228 HSP 2 Score: 119.013 bits (297), Expect = 6.926e-28 Identity = 63/170 (37.06%), Postives = 104/170 (61.18%), Query Frame = 0 Query: 451 GTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVS-FARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVA 619 G + +DG ++ +++ +R ++ ++PQ+P LF GTI N+ F A I A E L+ +S L G+++ V E G++ S G+RQL LARA + + +VL++DEAT+N+D ++++I+ A+ + T IAHRL T M +DRI V+ DG + ELG DL++ Sbjct: 1399 GKIFIDGVNICRLSLQDVRKKISIIPQDPLLFKGTIRKNLDPFDEYGELA--IWHALEQAKLSVAVSELEGGLETEVSEGGNNFSVGQRQLFCLARAILRKNKVLIMDEATANVDPMTDSLIQEAIRTEFKDCTVFTIAHRLYTVMDSDRILVMSDGEIKELGAPLDLLS 1566 HSP 3 Score: 90.1225 bits (222), Expect = 9.196e-19 Identity = 57/221 (25.79%), Postives = 107/221 (48.42%), Query Frame = 0 Query: 406 SDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARP--DATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLD-LASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVID-DGRLIELGTHDDLVAAGG 622 S +E L ++ +E GE A++GP G GKST+ + + + G + + G ++ QE ++F+G++ N+ +P D E++ C L + PDG + V E+G SLS G++ + LAR A + +LD+ S +D + + + + L +T I++ H+L A+ I +++ DG + GT++ L++ G Sbjct: 728 SSNEFTLKNISFSVEIGELCAIIGPVGCGKSTIIQSLLGEFPVSYGEINIKG-------------RISYASQEAWIFSGSVRQNILMGKPLIDKRYREVIRVC---ALEHDVREWPDGDYTFVGEKGISLSGGQKSRINLARCVYASADIYILDDPLSAVDPHVGQQLFDTCIQKFLSDKTVILVTHQLQFLKNANNIILLNSDGEIEASGTYEKLMSQSG 932
BLAST of abc transporter vs. SwissProt
Match: gi|67468754|sp|Q6AJW3.1|MSBA_DESPS (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 295.819 bits (756), Expect = 7.088e-91 Identity = 157/488 (32.17%), Postives = 279/488 (57.17%), Query Frame = 0 Query: 141 NRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMF 628 RVG+ ++ D R+++F+H+ RQSL FF + G L++R+ SD+ + ++ L ++ + V+F ++ LA I +I+ P + V F + + +++ A V + L E+++G R++ A R + V ++ + P E IG A ++ +GG+ V++G + G FAFL + + P++++ Q+ ++ QQG A+ ++ +L +P + + P+A L P +E V+F Y E +L ++L + GE +A+VGP+G GK+T+ L+ RF D Q G++ +DG D+R VT +SLR+Q+ +V Q+ LFN TI +N+++ + T +EI A +A + LP+G D+ + E G+ LS G+RQ +++ARA +A +L+LDEATS LD SE +++AL+ +++ RT VIAHRL+T A RI V+ G+++E G+H++L+ G Y ++ Sbjct: 84 ERVGQSIIRDFRLKIFAHIHRQSLSFFHNTPTGTLISRVLSDVALMQQAVSTVIIQLLRDFFQVIFLLGVIFYMNWKLALICFLII-PLAAIPIVKFGKIFRKLSTKTQEETAEVSNMLHETISGSRIVKAFCREDYEVERFHRQVETLFTITMKNAKYRVFQSPLMEIIGGFAVAGIIWVGGSEVINGSATPGTFFAFLTAMITAYDPVKRVSQVNSTIQQGLASAQRVFAILDIKPEIEDKPEATSLAPFKESIEFHDVSFSYGT-EKILSHINLKVPAGEALAIVGPSGGGKTTLTNLIPRFIDLQEGSITIDGTDIRDVTTNSLRNQIAMVTQQTILFNDTIRNNIAYGKDSCTEEEIRRAAKAAHALTFIEELPNGFDTALGEGGAKLSGGQRQRISIARALLADAPILILDEATSALDTESEREVQKALENLMQNRTTFVIAHRLSTIKNASRIVVVKKGKIVEEGSHEELLKLEGEYQLLY 569
BLAST of abc transporter vs. SwissProt
Match: gi|226693608|sp|O31707.3|YKNU_BACSU (RecName: Full=Uncharacterized ABC transporter ATP-binding protein YknU) HSP 1 Score: 295.819 bits (756), Expect = 8.938e-91 Identity = 172/565 (30.44%), Postives = 301/565 (53.27%), Query Frame = 0 Query: 67 LRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVW-FKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNG-HRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEP-VLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMF 628 L+ + P+R + L +++ T P++ Q ID ++ R W+ + + A +++ +A+ + G +Y LR ++ LQR S ++ +K G LM+R+T+D++ L GL L L + + VMF S L L+ I V L ++V+ F + + +R A + + + E+++G+ + + +R I N N +R ++ S++ + Y P E IG LL GG +V+ QL+ GEL AF + PI L + N + Q +A+ ++ +L E + + P A + G + V+ Y ++ L ++ G+ I ++GPTG+GKS+V +L+TRFY P G + +D + ++ +LRS +GVV QE FLF+ TI N+S+ RPDA+ ++++EA + + + LPDG D+++ ERG LS G++Q +A+ARA P +L+LD+ATS +D+ +E I+ AL V++ RT ++AHR+++ AD I V + GR+ E GTH +L+ GG+Y ++ Sbjct: 7 LKMYYWPYRKVFMWSLLAMLLMTAITVVYPIILQITIDEIVLGRQYQLAAWVSLGFIAVMVLKGMATFFHQYLGDMFGIKSVYRLRNGLYEKLQRLSFSYYDNAKTGDLMSRLTADVEGLRFFLSYGLAELIRFGLLVAISLSVMFYYSVPLT--LVTIAVLPFLAVAVYRFDKRVHPAFRGIRKSFAKLNTKVQENISGINTVKSLSREDFQ-ISTFNKANAEYRAQYLQTSSIWSAYFPLMEFIGNTCIVALLSYGGYLVMQNQLNPGELVAFFSLVNYMMWPIMNLGFVINMFSQAKASGERLLDILEKEEDITDHPHALHKQKLTGDVHFKNVSLAYGKEQTNALCNVSFEANSGKVIGLLGPTGSGKSSVTQLLTRFYSPVGGMITIDHKPITDYSLKTLRSNIGVVLQESFLFSSTIRSNISYGRPDASMEDVIEAAKRAQAHNFIMELPDGYDTMLGERGMGLSGGQKQRIAIARAICLNPSILILDDATSAVDMQTEHSIQLALKEVMKNRTTFIVAHRISSLKHADEILVFNKGRIRERGTHHELLEKGGYYKKIY 568
BLAST of abc transporter vs. SwissProt
Match: gi|54040062|sp|P63398.1|Y1303_MYCBO (RecName: Full=Uncharacterized ABC transporter ATP-binding protein Mb1303c >gi|618798194|sp|P9WQJ2.1|Y1272_MYCTO RecName: Full=Uncharacterized ABC transporter ATP-binding protein MT1310 >gi|618798195|sp|P9WQJ3.1|Y1272_MYCTU RecName: Full=Uncharacterized ABC transporter ATP-binding protein Rv1272c) HSP 1 Score: 286.189 bits (731), Expect = 1.028e-86 Identity = 174/490 (35.51%), Postives = 275/490 (56.12%), Query Frame = 0 Query: 138 RFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAM 627 R N + M LR V + R L +F + G L++R+T+DID L + L LT+V + +M ++S LA I L + VP LL++ R S+ + + + L E+ +G V+ + + + A A + + PA IG +G + + GG V GQ+++G + AF+ Y+ F P+ QL +YN+ Q G A+ ++ +L + ELP + GR+E V F Y PV+ DL LV EPG T+A+VGPTGAGK+T+ L+ RFY+ G + +DG D+ +V+ SLRS++G+V Q+ +L++GTI +N+++ RP+AT DEI+EA A + ++ LP G + V G S+S GE+QL+ +ARAF+ARP++L+LDEATS++D +E +I+RA+ + RT+ +IAHRL+T AD I V+ G+++E G H +L+A G Y M Sbjct: 142 RLLNLTVQKTMVRLRTDVEDKVHRLPLSYFDGQQRGELLSRVTNDIDNLQSSLSMTISQLVTSILTMVAVLAMMVSISGLLALITL-LTVPLSLLVTRAITRRSQPLFVAHWTSTGRLNAHLEETYSGFTVVKTFGHQAAARERFHELNDDVYQAGFGAQFLSGLVQPATAFIGNLGYVAVAVAGGLQVATGQITLGSIQAFIQYIRQFNMPLSQLAGMYNALQSGVASAERVFDVL--DEPEESPEPEPELPNLTGRVEFEHVNFAYLPGTPVIRDLSLVAEPGSTVAIVGPTGAGKTTLVNLLMRFYEIGSGRILIDGVDIASVSRQSLRSRIGMVLQDTWLYDGTIAENIAYGRPEATTDEIVEAARAAHVDRFVNTLPAGYQTRVSGDGGSISVGEKQLITIARAFLARPQLLILDEATSSVDTRTELLIQRAMRELRRDRTSFIIAHRLSTIRDADHILVVQTGQIVERGNHAELLARRGVYYQM 628
BLAST of abc transporter vs. SwissProt
Match: gi|81815000|sp|O07549.1|YHEH_BACSU (RecName: Full=Probable multidrug resistance ABC transporter ATP-binding/permease protein YheH) HSP 1 Score: 286.96 bits (733), Expect = 1.475e-86 Identity = 171/494 (34.62%), Postives = 279/494 (56.48%), Query Frame = 0 Query: 140 ANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQ-AMLLLI----GGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMF 628 ANR+ + +R VFSH+Q+ + +F AG ++ R+T+D +A+ L+ L + + I +F L LA + L IV P + L SV ++R + +R + + + ++ES+ G+ +I A ++ + H R + ++ ++ + +I A + LI G ++ G +S+G L+AF+ YL F PI +V ++ + + + ++ LL E + EA + + + GR+E V+F Y + E VL + + GET+A+VG TG+GKS++ L+ RFYD Q G V +DG + ++ LRS +G+V Q+P+LF+GTIG NVS T +EI A VG +L +LP G++ V E+GS+LSSGERQL++ ARA P +L+LDEAT+++D +E +I++ALDVV +GRT VIAHRL+T AD+I V+D G ++E G H++L+A G Y M+ Sbjct: 178 ANRI----IQKMRQDVFSHIQKMPIRYFDNLPAGKVVARITNDTEAIRDLYVTVLSTFVTSGIYMFGIFTALFLLDVKLAFVCLAIV-PIIWLWSVIYRRYASYYNQKIRSINSDINAKMNESIQGMTIIQAFRHQKETMREFEELNESHFYFQNRMLNLNSL--MSHNLVNVIRNLAFVCLIWHFGGASLNAAGIVSIGVLYAFVDYLNRLFQPITGIVNQFSKLELARVSAGRVFELLE-EKNTEEAGEPAKERAL-GRVEFRDVSFAYQEGEEVLKHISFTAQKGETVALVGHTGSGKSSILNLLFRFYDAQKGDVLIDGKSIYNMSRQELRSHMGIVLQDPYLFSGTIGSNVSLDDERMTEEEIKNALRQVGAEPLLKKLPKGINEPVIEKGSTLSSGERQLISFARALAFDPAILILDEATAHIDTETEAVIQKALDVVKQGRTTFVIAHRLSTIRNADQILVLDKGEIVERGNHEELMALEGQYYQMY 662
BLAST of abc transporter vs. SwissProt
Match: gi|18266858|sp|P35598.3|EXP8_STRPN (RecName: Full=Putative ABC transporter ATP-binding protein exp8; AltName: Full=Exported protein 8) HSP 1 Score: 277.715 bits (709), Expect = 6.929e-84 Identity = 181/570 (31.75%), Postives = 323/570 (56.67%), Query Frame = 0 Query: 67 LRSFLGPHRNKLVLVALLVVIETLSLQAG-PLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITI-VMFTLSPTLAAILLVIVVPAMLLLSVWFKRAS---ERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIY-GPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEA-VGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFA 629 L S+L P+ L +AL ++ T +++ PL+ ID+ + + A+ + V Y IL +V + FA RV ++ D+R F+++++ + +F + AG +++R+T+D + ++ +F G+++ + A+ + + T+ M L L A++L+ + LL++++ K++ E+ +L+ D + S L+E++ G+R+I A N+ + + H R+ + A++ PA + ++G A+L+ G ++VG ++AF+ Y+ F P+ ++ Q +++ Q + ++ L+ E + + + +G + V F Y P+L D+ + GETIA VG TG+GKS++ ++ RFY+ Q G V LD D+R + LR +G+V QEPFL++GTI N+ A T+DE ++A A V + LP G DS V ERGSS S+G+RQLLA AR ++P++L+LDEAT+N+D +E++++ +L + +GRT I IAHRL+T A+ I V+D GR+IE GTH++L+A GG Y M++ Sbjct: 14 LMSYLKPY-GLLTFLALSFLLATTVIKSVIPLVASHFIDQYLSNLNQLAVTVLLVYYGLYILQTVVQYVGNLLFA-RVSYSIVRDIRRDAFANMEKLGMSYFDKTPAGSIVSRLTNDTETISDMF-SGILSSFISAVFIFLTTLYTMLVLDFRLTALVLLFLPLIFLLVNLYRKKSVKIIEKTRSLLSD----INSKLAENIEGIRIIQAFNQEKRLQAEFDEINQEHLVYANRSVALDALFLRPAMSLLKLLGYAVLMAYFGYRGFSIGITVGTMYAFIQYINRLFDPLIEVTQNFSTLQTAMVSAGRVFALI-DERTYEPLQENGQAKVQEGNIRFEHVCFSYDGKHPILDDISFSVNKGETIAFVGHTGSGKSSIINVLMRFYEFQSGRVLLDDVDIRDFSQEELRKNIGLVLQEPFLYHGTIKSNI--AMYQETSDEQVQAAAAFVDADSFIQELPQGYDSPVSERGSSFSTGQRQLLAFARTVASQPKILILDEATANIDSETESLVQASLAKMRQGRTTIAIAHRLSTIQDANCIYVLDKGRIIESGTHEELLALGGTYHKMYS 573
BLAST of abc transporter vs. SwissProt
Match: gi|67468769|sp|Q7NZU6.1|MSBA_CHRVO (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 267.7 bits (683), Expect = 3.522e-80 Identity = 188/573 (32.81%), Postives = 292/573 (50.96%), Query Frame = 0 Query: 67 LRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDID--------ALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDK---IALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPD--AYELPPIDGRLELSGVTFGYSD-DEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYA 625 L +L + L+L L + + L+ A L + ID V +D + W+ +A L+ +A I A+ + L+ LR ++F+ L ++ ++G LM+R+T+D++ +TV +DGL L + L M T L I LV V+PA ++ + +R L R +A + L+ES+ R I + + R V+ S A + + A +L G G L+ G+ FL + FAP++++ + + Q+G AA + + EP PD A LP GRL V+F Y + D P L +DL I+PGET+A+VG +G+GK+T+A LV RFY+P G + LDG L + + LR + +V Q+ LFN T+ N+++ R DA+ +EI+EA A + + LPDG+++V+ E G+ LS G+RQ LA+ARA + +L+LDEATS LD SE +++ AL+ +++ RT IVIAHRL+T ADRI V+ GRL E G H L+ GG YA Sbjct: 15 LLGYLLGYWKVLLLSMLSMAVAALTEPAVAKLLKPLIDGGFVNKDPQVIMWVPLAIIGIYLIRGLAGFINEYTASWLTGQLVQRLRQQMFAKLVNLPARYYDEHQSGRLMSRITNDVNQVTEAGFNVITVTVRDGLTALGMLGL--------MLTTDWQLTLICLV-VMPA---VTYCMRLVGQRLRGLARQNQQHMAQMTQVLAESIQCQRAIKVYGGQEREMARFDHTATSVRRNQVKQSAASAANTGVTQLMIACALAAILYFAGLRAQHGGLTAGDFMVFLTAMLGLFAPVKRISSVSQAMQRGLAAAESVFAFI-DEPG---EPDDGASALPATRGRLSFDAVSFAYPNVDSPALSGIDLEIQPGETVALVGSSGSGKTTLASLVPRFYEPSAGRLLLDGVPLADIPLRQLRGHIALVSQQVELFNDTVAANIAYGREDASREEIVEAARAANAMEFIEGLPDGLETVIGENGARLSGGQRQRLAIARALLKNAPLLILDEATSALDTQSERLVQAALENLMKNRTTIVIAHRLSTIENADRIVVMHQGRLAEQGRHQALLEQGGLYA 571
BLAST of abc transporter vs. SwissProt
Match: gi|460425281|sp|P0DKX6.1|CYAB_BORP1 (RecName: Full=Cyclolysin secretion/processing ATP-binding protein CyaB) HSP 1 Score: 270.396 bits (690), Expect = 6.133e-80 Identity = 185/561 (32.98%), Postives = 301/561 (53.65%), Query Frame = 0 Query: 74 HRNKLVLVALL-VVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAM---LLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEP-VLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFA 629 HR+ + V L+ +V++ +SL PL Q +D+ +V L I V + A+IL + + IR L +L R+++HL R L +F + G + R+ +++ + V + + + VV VMF S L ++L +P LLS+ R + ++ A + L E+++G+ + + + + G+ A + + V + AN + +I + + +L +G V+ +++VGEL AF + P+ +L QL+N +QQ ++ ++ +L V A D +LP + G +EL V+F Y D L ++ L I PGE + VVG +G+GKST+ +L+ R + G V +DGHD+ V SLR QLGVV QE LFN ++ DN++ RP A+ E++ A G + + +LP+G D+++ E G LS G+RQ + +ARA + RPRVL+LDEATS LD SE II+R + + +GRT I+IAHRL+ ADRI V++ G + E G+H+ L+AAGG YA + A Sbjct: 153 HRHLIGEVLLISLVLQFISLLT-PLFFQVVMDKVLVNNAMETLNVIAVGFLAAILFEALLTGIRTYLFAHTSSKLDVELGARLYAHLLRLPLAYFQARRVGDSVARV-RELEHIRAFLTGNAVTVLLDVVFSVVFIAVMFFYSVKLTLVVLA-ALPCYFLLSLVLTPVLRRRLDVKFNRGAENQAFLVETVSGIDTVKSLAVEPQWQRNWDRQLAGYVAAGLSVANVAML---ANTGVTLISRLVALGVLWVGATEVVAQRMTVGELVAFNMLSGHVTQPVIRLAQLWNDFQQTGVSMQRLGDILNCRTEV--AGDKAQLPALRGSIELDRVSFRYRPDAADALRNVSLRIAPGEVVGVVGRSGSGKSTLTRLIQRMFVADRGRVLIDGHDIGIVDSASLRRQLGVVLQESTLFNRSVRDNIALTRPGASMHEVVAAARLAGAHEFICQLPEGYDTMLGENGVGLSGGQRQRIGIARALIHRPRVLILDEATSALDYESEHIIQRNMRDICDGRTVIIIAHRLSAVRCADRIVVMEGGEVAECGSHETLLAAGGLYARLQA 705
BLAST of abc transporter vs. SwissProt
Match: gi|460425282|sp|P0DKX5.1|CYAB_BORPE (RecName: Full=Cyclolysin secretion/processing ATP-binding protein CyaB) HSP 1 Score: 270.011 bits (689), Expect = 1.019e-79 Identity = 182/560 (32.50%), Postives = 296/560 (52.86%), Query Frame = 0 Query: 74 HRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAM---LLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEP-VLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFA 629 HR+ + V L+ ++ PL Q +D+ +V L I V + A+IL + + IR L +L R+++HL R L +F + G + R+ +++ + V + + + VV VMF S L ++L +P LLS+ R + ++ A + L E+++G+ + + + + G+ A + + V + AN + +I + + +L +G V+ +++VGEL AF + P+ +L QL+N +QQ ++ ++ +L V A D +LP + G +EL V+F Y D L ++ L I PGE + VVG +G+GKST+ +L+ R + G V +DGHD+ V SLR QLGVV QE LFN ++ DN++ RP A+ E++ A G + + +LP+G D+++ E G LS G+RQ + +ARA + RPRVL+LDEATS LD SE II+R + + +GRT I+IAHRL+ ADRI V++ G + E G+H+ L+AAGG YA + A Sbjct: 153 HRHLIGEVLLISLVLQFIALLTPLFFQVVMDKVLVNNAMETLNVIAVGFLAAILFEALLTGIRTYLFAHTSSKLDVELGARLYAHLLRLPLAYFQARRVGDSVARV-RELEHIRAFLTGNAVTVLLDVVFSVVFIAVMFFYSVKLTLVVLA-ALPCYFLLSLVLTPVLRRRLDVKFNRGAENQAFLVETVSGIDTVKSLAVEPQWQRNWDRQLAGYVAAGLSVANVAML---ANTGVTLISRLVALGVLWVGATEVVAQRMTVGELVAFNMLSGHVTQPVIRLAQLWNDFQQTGVSMQRLGDILNCRTEV--AGDKAQLPALRGSIELDRVSFRYRPDAADALRNVSLRIAPGEVVGVVGRSGSGKSTLTRLIQRMFVADRGRVLIDGHDIGIVDSASLRRQLGVVLQESTLFNRSVRDNIALTRPGASMHEVVAAARLAGAHEFICQLPEGYDTMLGENGVGLSGGQRQRIGIARALIHRPRVLILDEATSALDYESEHIIQRNMRDICDGRTVIIIAHRLSAVRCADRIVVMEGGEVAECGSHETLLAAGGLYARLQA 705
BLAST of abc transporter vs. SwissProt
Match: gi|81916845|sp|Q9CXJ4.1|ABCB8_MOUSE (RecName: Full=ATP-binding cassette sub-family B member 8, mitochondrial; Flags: Precursor) HSP 1 Score: 268.855 bits (686), Expect = 2.863e-79 Identity = 170/494 (34.41%), Postives = 269/494 (54.45%), Query Frame = 0 Query: 141 NRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFT-LSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITA-NNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPID--GRLELSGVTFGYSDDE--PVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQ-LGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAM 627 + +GE + D+R +FS L RQ + FF K G L++R+T+D+ F+ +++ +++ T V+ ++V + LSP L ++L +V PA++ + + +++IA E+L VR + A +R + A + + A + G +N A + L IGG++V QL G+L +FL+ + L L+ +G +A ++ +A P V+ Y +P D G + VTF Y VL D L + G+ +A+VG +G GK+TVA L+ RFYDP+ G+V LDGHDLR + LR Q +G + QEP LF TI +N+ F + DA+ +E+ A + +S PDG +VV ERG++LS G++Q LA+ARA + +P VL+LDEATS LD SE +++ ALD GRT +VIAHRL+T A I V+ +G++ E GTH++L+ GG Y+ + Sbjct: 199 SHIGERMAMDMRKALFSSLLRQDIAFFDAKKTGQLVSRLTTDVQEFKSSFKL-VISQGLRSCTQVIGSLVSLSMLSPRLT-LMLAVVTPALMGVGTLMGSGLRKLSRQCQEQIARATGVADEALGNVRTVRAFAMEKREEERYQAELESCCCKAEELGRGIALFQGLSNIAFNCMVLGTLF-IGGSLVAGQQLKGGDLMSFLVASQTVQRSMASLSVLFGQVVRGLSAGARVFEYMALSP-VIPLTGGYCIPNKDIRGSITFQNVTFSYPCRPGFNVLKDFTLKLPSGKIVALVGQSGGGKTTVASLLERFYDPEAGSVTLDGHDLRTLNPSWLRGQVIGFISQEPVLFATTIMENIRFGKLDASDEEVYTAAREANAHEFISSFPDGYSTVVGERGTTLSGGQKQRLAIARALIKQPTVLILDEATSALDAESERVVQEALDRASAGRTVLVIAHRLSTVRAAHSIIVMANGQVCEAGTHEELLKKGGLYSEL 688
BLAST of abc transporter vs. SwissProt
Match: gi|122064497|sp|Q1QX69.1|MSBA_CHRSD (RecName: Full=Lipid A export ATP-binding/permease protein MsbA) HSP 1 Score: 264.233 bits (674), Expect = 6.505e-79 Identity = 170/498 (34.14%), Postives = 276/498 (55.42%), Query Frame = 0 Query: 139 FANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDID--------ALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDE-PVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAM 627 + + V +++ LR VF+H+ R FF +G L++R+T ++ A+T++ ++GL + + ++ ++ T M TL L+ +VV S F+R S R +++ + V SE+L+G RV+ + + A + +R+ +++ + A+ P + + + A L+ + + L ++ GE AF+ + P++QL ++ ++ Q+G +A ++ GLL P V E +Y IDGR+ GV F Y +D+ VL +DL + GE IA+VG +G+GKST+ L+ RFY P G V LD D++ + LR ++ +V Q+ LFN TI N+++ PDA + + A + + + RLP+G D+VV + G LS G+RQ LA+ARA +LVLDEATS LD SE I++AL+ V GRT VIAHRL+T RADRI V++ G +IE GTH +L+A G YAA+ Sbjct: 84 YMSDVARNVVHALRCEVFNHMLRLPGRFFDMHSSGHLLSRVTYHVEQVTGAATNAITIILREGLFVIGL--VSYLLWTNWMLTLIFMAVTPLIGLVVN---YTSKRFRRLSRR----IQNSMGDVTHVASEALSGYRVVRTHGAEAYEKARFAEASDYNREQSMKVALTKAVSTPVIQLLVALSLAGLVWLAMSPALMASMTPGEFVAFITAASLMAKPVRQLTEVNSTIQKGLSASQELFGLLEQPPEVDEG--SYVPARIDGRVRFEGVRFRYGEDQAEVLKGIDLDVPQGEMIAIVGRSGSGKSTLVSLMPRFYRPTEGRVLLDDVDIQEYALSPLRQRIALVSQQVTLFNTTIAANIAYGHPDADREAVESAARSAYAHEFIERLPNGYDTVVGDNGVMLSGGQRQRLAIARAIFKDAPLLVLDEATSALDTESERYIQQALERVCRGRTTFVIAHRLSTIERADRILVMEQGEIIESGTHGELLAQDGAYAAL 570
BLAST of abc transporter vs. nr
Match: gi|1200462788|gb|OUV78231.1| (ABC transporter ATP-binding protein [Acidimicrobiaceae bacterium TMED130]) HSP 1 Score: 730.709 bits (1885), Expect = 0.000e+0 Identity = 362/631 (57.37%), Postives = 470/631 (74.48%), Query Frame = 0 Query: 1 MSFGPPAGSPFSGPSASQTAARNGLPFAGVPSELAEKAKAILETEPEHPKADIHFEQSGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASW 631 M FG P G F G ++ ++ GLP AGVP L ++ K +L+ EPEH A+I F PFTLRSFLG H+ KL+ +LV+ E++ LQAGPLLT+ GID +V + S L + V Y SIL++ +++ RIR+ +GEGLM LR++VFSHLQRQSL+F+T KAGVLMTRMTSDI+AL+ LFQ+GLVN AVQ LT+VVITIV+ L+ LA I L+ VVP ++LS WF+R S Y +VR+KI+ VLSDL ESLAG+RVITA+NRR +N H N+V H+DAN+ A +IY P E+I I+G+A++L++GG MVL+G+L +GEL AFLLYL AFF PIQ L QLYN YQQGQAAV K+R LL T PSV E PDA LP I+G + V F Y +D PVL +++ I+ GETIA+VGPTG GKSTVAKL TRFYDP G V +DG+D+R V + SLR Q+GVVPQEPFLF G+I NV F+RP+A+ DEI+EA +A GL M+ LPDG+D+V+HERG+SLS+GERQL+A++RAF+++PRVLVLDEATSNLDL SE+ +ERALD +L+GR+AI++AHRLAT MRADRI V+D+GR++E G+H++L+ G Y+ M W Sbjct: 1 MGFGAPIG--FGGANSVTSSRDAGLPHAGVPGHLQDEVKRVLQEEPEHQLANIKFNHFVQPEVPFTLRSFLGTHKWKLLFAMVLVIGESILLQAGPLLTKFGIDEGVVDGNRSVLLIVSVIYLGSILLHSLSAWYRIRYTGSLGEGLMKSLRIKVFSHLQRQSLEFYTNEKAGVLMTRMTSDIEALSQLFQEGLVNFAVQGLTVVVITIVLLFLNLKLALITLLAVVPITVVLSEWFRRKSSNAYLIVRNKISDVLSDLQESLAGIRVITAHNRRAYNVARHTNIVGEHKDANLDAVKAASIYTPGTESIAILGRALVLIVGGRMVLNGELEIGELTAFLLYLGAFFTPIQTLTQLYNGYQQGQAAVAKLRDLLETSPSVTELPDAQPLPDIEGSIVFEDVNFAYVEDNPVLKNINFKIQIGETIAIVGPTGGGKSTVAKLATRFYDPSSGRVLIDGYDIRNVQLESLRKQIGVVPQEPFLFAGSIRQNVGFSRPEASDDEIIEALDASGLMPMVDSLPDGIDTVIHERGASLSAGERQLIAISRAFLSKPRVLVLDEATSNLDLQSESQVERALDAILDGRSAIIVAHRLATVMRADRIIVVDNGRIVESGSHNELLNKDGAYSEMHQQW 629
BLAST of abc transporter vs. nr
Match: gi|745852220|gb|KIE49560.1| (ABC transporter ATP-binding protein [marine actinobacterium MedAcidi-G1]) HSP 1 Score: 716.842 bits (1849), Expect = 0.000e+0 Identity = 348/618 (56.31%), Postives = 461/618 (74.60%), Query Frame = 0 Query: 14 PSASQTAARNGLPFAGVPSELAEKAKAILETEPEHPKADIHFEQSGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASW 631 PS+ Q+ A GLPFA +P + ++ +LE EPEHP I F S E +PFTL++FL H L L LLVV+E+ GPLLTQ ID + +++ L+ + Y ASI ++ S +R F R+GE L+Y+LR+RVF+HLQRQS FFT KAGVLMTRMTSDI++LTVLFQ+GLVN AVQ +TL+VIT + L+P+LA I L++V+P ++ ++WF++ S Y VRDKIA +LS+LSESLAG+RVITA N+R++ + H + H AN+ A++GP EAIGII QA +L +GG+MVL +LS+GEL AF+L+LT+FFAPIQ LVQLYN YQQG A++ K+R LL+T PSV E A E+P + G +EL V F Y D+PVL ++DL +E GE +A+VGPTGAGKSTVAKL++RFYDP+ G V +DG+DLR V + SLR Q+ VVPQEPFLFNG+I +NV FARPD+ +I +AC+A GLTD+++RLP+G+DS VHERG+SLS+GERQLLALARAF+ P++L+LDEATSNLDL SE++IE ALD +L GRTAI++AHR+ATAMRADRIAVID+G ++E+GTH +LV + G YA M+ +W Sbjct: 14 PSSVQSNAEAGLPFAELPDDFLKRIDKVLEKEPEHPDPKISFSHSKWERSPFTLKTFLSSHVFLLCLALLLVVLESGLQHLGPLLTQIAIDEGVSNKNTQILFVTCICYVASIAISAAVSFVRTSFTGRLGEKLVYELRIRVFTHLQRQSFSFFTNEKAGVLMTRMTSDIESLTVLFQEGLVNFAVQIITLLVITAYLIVLNPSLALISLLLVIPVNIIFTLWFRKVSIFGYLSVRDKIADILSNLSESLAGMRVITAFNQRKYRSEIHDKITVSHFKANLYTGRAQALFGPGTEAIGIITQATILFVGGSMVLKNELSIGELTAFILFLTSFFAPIQSLVQLYNQYQQGNASIEKLRNLLSTTPSVYEKETAIEMPKLLGCVELKSVDFNYEIDKPVLKNIDLKVESGEVLALVGPTGAGKSTVAKLISRFYDPESGQVLIDGYDLRDVQLESLRKQIAVVPQEPFLFNGSIKENVIFARPDSNEKDIEKACKAAGLTDLINRLPNGIDSAVHERGASLSAGERQLLALARAFLCEPQLLILDEATSNLDLLSESLIEVALDNLLNGRTAIIVAHRIATAMRADRIAVIDNGSILEIGTHKELVESKGKYATMYKTW 631
BLAST of abc transporter vs. nr
Match: gi|1251831454|gb|PDH68433.1| (ABC transporter ATP-binding protein [Acidimicrobiales bacterium MED-G01]) HSP 1 Score: 703.745 bits (1815), Expect = 0.000e+0 Identity = 350/620 (56.45%), Postives = 469/620 (75.65%), Query Frame = 0 Query: 15 SASQTAARNGLPFAGVPSELAEKAKAILETEPEHPKADIHFEQSGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASWDAH 634 SA+Q++A GLPFAGVPSE+ + A IL+ EP HP+ + F + + + LRS R + + +ET++ GP+LTQ+GID ++ +D +AL+ + I+VN S +R R+ ++GE +MYD+R+ +FSH QR LD++T+ K+GVL++RMTSD++ALT+L +G VNL +QALT+ V+T V+F+ +P LA +LL +V+P ++++++WF+ SER YA VRD+IA+VL+DLSE+LAGVRVI A NRRR N H NVV + DAN+ + GAIYGP E IGI QA++LL+GG MV+DG L VGEL AF+L++ FFAPIQQ+VQLYN+YQQGQ+ + KI +L+TEPS++E+ +A LPPI G+++ VTF Y D VL D++L I PGET A VGPTGAGKST+AKL+TRFYDP G V +DG DL+A + SLR+QLGVVPQEPFLF+GTI DNV+FAR DAT +EI EA VGLT+ +++L DG+D++VHERG SLS+GERQL+ALARAF++RPRVLVLDEATS+LDL SE IE+ALD +LEGRTAI+IAHRLATAM+ADRIAVIDDGR+IELG+HD+L+ G YA MF +W +H Sbjct: 14 SATQSSASAGLPFAGVPSEMQDGASEILKKEPVHPEPEFTFHRLALRKSRLNLRSLFENRRIAALFGLFFLAVETITALMGPVLTQQGIDNGVMEQDRTALYRAVTLFGLIIVVNAATSFLRQRWNGKLGEDIMYDVRLELFSHFQRMGLDWYTSEKSGVLLSRMTSDVEALTLLVNEGFVNLVIQALTISVVTFVLFSYNPVLAVLLLGLVLPPLVVMTLWFRAVSERGYADVRDRIAVVLADLSENLAGVRVIAALNRRRQNAESHRNVVGAYLDANLYTARAGAIYGPVTEGIGIAAQAIVLLVGGWMVVDGSLQVGELTAFVLFVNTFFAPIQQMVQLYNTYQQGQSGLKKIGDILSTEPSIVESDNAVSLPPIHGQIKFEAVTFRYDDGPEVLRDINLTINPGETFAFVGPTGAGKSTIAKLITRFYDPTSGVVSIDGQDLKAALIDSLRTQLGVVPQEPFLFHGTIRDNVAFARSDATEEEINEAISHVGLTEAVAQLSDGIDTLVHERGVSLSAGERQLIALARAFISRPRVLVLDEATSSLDLRSEAHIEKALDGLLEGRTAILIAHRLATAMKADRIAVIDDGRIIELGSHDELIQLRGRYAEMFETWSSH 633
BLAST of abc transporter vs. nr
Match: gi|745852304|gb|KIE49642.1| (ABC transporter ATP-binding protein [marine actinobacterium MedAcidi-G2A] >gi|1200381346|gb|OUU99876.1| ABC transporter ATP-binding protein [Acidimicrobiaceae bacterium TMED77]) HSP 1 Score: 695.271 bits (1793), Expect = 0.000e+0 Identity = 346/598 (57.86%), Postives = 452/598 (75.59%), Query Frame = 0 Query: 34 LAEKAKAILETEPEHPKADIHFEQSGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASW 631 + E+ +L+ EP H I F+ + FTLRSFL H+ KL L +LVV E++ LQAGPLLT+ GID +VP + + L + +AY SI ++ +++ RIR+ +GE LM +LR++VFSHLQRQSL+F+T KAGVLMTRMTSDI+AL+ LFQ+GLVN AVQ LT++VITI++ LSPTL I L+ +VP ++LS WF+R S Y VR++I+ VLSDL ESLAG+RVIT++NRRRHN I H N+V H+DAN+ A +IY P EAI I+G+A++L+IGG MVL+G+L +GEL AFLLYL AFFAPIQ L QLYN YQQGQAAV+K+R LLAT PSV E P A+EL I+G +E V F Y E VL +++L I+ GETIA+VGPTG GKST+AKL TRFYDP GT+ +DG ++R VT+ SLR Q+GVVPQEPFLF G+I DN+SF+RPDAT +++ + +AVGLT ++ LP G+++ +HERG+SLS+GERQL+ALARAF+++PRVLVLDEATSNLDL SE IE+ALD +L+GRTAI++AHRLAT MRADRI V+ G ++E GTH +L+ GGHY+ M W Sbjct: 1 MQEEVNTVLDNEPIHETEPIEFKHFIGKEPLFTLRSFLSGHKWKLALALVLVVGESILLQAGPLLTKFGIDEGVVPGNKNILITVALAYIGSIALHGLSAWYRIRYTGALGESLMKNLRIKVFSHLQRQSLNFYTNEKAGVLMTRMTSDIEALSQLFQEGLVNFAVQGLTVIVITIILIVLSPTLGLITLLAIVPVTIILSEWFRRKSSNAYGRVRNRISDVLSDLQESLAGIRVITSHNRRRHNVIRHTNIVGEHKDANLDAIKAASIYTPGTEAIAIVGRALVLIIGGRMVLNGELEIGELTAFLLYLGAFFAPIQTLTQLYNGYQQGQAAVSKLRDLLATAPSVPENPTAFELSSIEGAIEFKSVNFSYEPGEKVLTNINLNIQAGETIAIVGPTGGGKSTIAKLTTRFYDPDSGTITIDGSNIRDVTIESLRRQIGVVPQEPFLFAGSIRDNISFSRPDATDEDVFRSLDAVGLTGLVESLPSGINTEIHERGASLSAGERQLIALARAFLSQPRVLVLDEATSNLDLQSENRIEKALDQLLDGRTAIIVAHRLATVMRADRIIVVSSGNIVEEGTHAELLGQGGHYSQMHEQW 598
BLAST of abc transporter vs. nr
Match: gi|760042148|ref|WP_043725124.1| (ABC transporter ATP-binding protein [Kutzneria sp. 744] >gi|585095948|gb|EWM17889.1| ABC transporter [Kutzneria sp. 744]) HSP 1 Score: 689.493 bits (1778), Expect = 0.000e+0 Identity = 338/607 (55.68%), Postives = 439/607 (72.32%), Query Frame = 0 Query: 30 VPSELAEKAKAILETEPEHPKADIHFEQS--GVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASWDAH 634 VP E+ +L EPEHP+ + F+ + +LR + P+ ++ +LVV+E L+LQAGP LTQ GID I+ ++ S L + Y AS+LV A + R++ R+ +M DLRVRVF+ LQR SLDF+T KAGV+MTRMTSDI+ L L QDGLV A+Q LT+V +T+V+FT LA I +V+VVP + +S+WF RAS + Y VRD IA VL+DLSESL GVR++TA+NR+RHN HH V + D NV+ + + YGP + +G+ GQ LL IG MV DG+L++GEL AFLLYL AFF PIQQLVQLYN YQQGQ+++TK++ LL P+V+E+P A +LPP++G + VTFGY D PV+ + L I GET+A VGPTGAGKST+AKLVTRFYDP G V +DGHDLR + + SLR QLGVVPQEPFLF G + DN+ FA P+A+ D++ +A AVGL +++ R+P G+D+VV ERG SLSSGERQL+ALARAF+A+PRVLVLDEATSNLDL SET IE ALDV+LE RTAI+IAHRL+TAM+ADRI V+DDGR++E+G+HD LVAAGG Y M+A+W + Sbjct: 29 VPQEMQAGVNKLLAEEPEHPQPEAVFDHGRPDPDGAKLSLRRLVRPYLGMTLVAGVLVVVEALTLQAGPKLTQIGIDSGIIAKNYSVLVMVAAVYLASLLVTGFAQAARVKVTGRIAAWVMNDLRVRVFTQLQRLSLDFYTGEKAGVIMTRMTSDIENLQQLLQDGLVQFAIQGLTMVAVTVVLFTFDVRLALITVVLVVPILTAMSLWFHRASSKGYVKVRDNIANVLADLSESLQGVRIVTAHNRQRHNIEHHRQVTGKYYDTNVQTGRINSWYGPGTQVVGVAGQLALLAIGAGMVADGELTIGELVAFLLYLGAFFQPIQQLVQLYNMYQQGQSSITKLKSLLGQAPAVVESPTAVDLPPVEGEITFDDVTFGYLPDRPVISGVSLDIRAGETVAFVGPTGAGKSTLAKLVTRFYDPTAGRVLIDGHDLRDLHIESLRRQLGVVPQEPFLFAGPLRDNIRFAAPEASDDQVWDALRAVGLVEVVERMPQGLDTVVQERGQSLSSGERQLVALARAFLAQPRVLVLDEATSNLDLQSETKIEDALDVLLERRTAILIAHRLSTAMKADRIVVVDDGRIVEIGSHDQLVAAGGKYTQMYATWTSQ 635
BLAST of abc transporter vs. nr
Match: gi|1200626813|gb|OUX35040.1| (ABC transporter ATP-binding protein [Actinobacteria bacterium TMED270]) HSP 1 Score: 684.1 bits (1764), Expect = 0.000e+0 Identity = 342/620 (55.16%), Postives = 466/620 (75.16%), Query Frame = 0 Query: 15 SASQTAARNGLPFAGVPSELAEKAKAILETEPEHPKADIHFEQSGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASWDAH 634 SA+Q++A GLPFAGVPSE+ E A IL+ EP HP+ + F + + LRS HR + L+ +ET++ GP+LTQ+GID ++ D ++L+ + + I++N + S +R R+ +GE +MYD+R+ +FSH QR LD++T+ K+GVL++RMTSD++ALT+L +G VNL +QALT+ ++T V+F+ +P LA +LLV+V+P ++++++WF+ SER Y+ VRD+IA VL+DLSE+LAGVRVI A NRRR N H +VV + DAN+ + GAIYGPA E IGI QA++LL+GG MV+DG L VGEL AF+L++ FFAPIQQ+VQLYN+YQQGQ+ +TKI +LAT PS++E+ A L PI+G++E + VTF Y D VL D++L I+ GET A VGPTGAGKST+AKL+TRFYDP G V +DG DL+ V + SLR QLGVVPQEPFLF+GTI DNV+FA+ DA+ +E+ EA VGL + + +L DG++++VHERG SLS+GERQL+ALARAF++RPRVLVLDEATS+LDL SE IE LD +LEGRTAI+IAHRLATAM+ADRIAVID G++IELG+HD+L+ GG Y+ MF +W +H Sbjct: 13 SATQSSASAGLPFAGVPSEMQEGASEILKREPIHPEPVVSFHRLAHRASRLNLRSLFENHRIAALWGLFLLAVETITALLGPVLTQQGIDNGVMREDRTSLYRAVILFGVIIVINAITSFLRQRWNGTLGENIMYDVRLELFSHFQRMGLDWYTSEKSGVLLSRMTSDVEALTLLVNEGFVNLVIQALTVSIVTAVLFSYNPLLAILLLVLVLPPLVVMTLWFRTVSERGYSDVRDRIASVLADLSENLAGVRVIAALNRRRQNAESHRSVVGAYLDANLYTARAGAIYGPATEGIGIAAQAIVLLVGGWMVVDGSLQVGELTAFVLFVNTFFAPIQQMVQLYNTYQQGQSGLTKIGDILATTPSIVESETAVPLRPIEGQIEFNSVTFAYGDRPEVLRDINLCIKKGETFAFVGPTGAGKSTIAKLITRFYDPVSGVVSIDGQDLKDVQIESLRKQLGVVPQEPFLFHGTIRDNVAFAKRDASDEEVQEAIAHVGLKETVDQLADGINTLVHERGVSLSAGERQLIALARAFISRPRVLVLDEATSSLDLRSEAQIENVLDGLLEGRTAILIAHRLATAMKADRIAVIDQGQIIELGSHDELIELGGRYSEMFDTWSSH 632
BLAST of abc transporter vs. nr
Match: gi|1010955209|ref|WP_061914436.1| (ABC transporter ATP-binding protein [Streptomyces bungoensis] >gi|973921871|gb|KUN90254.1| ABC transporter ATP-binding protein [Streptomyces bungoensis]) HSP 1 Score: 680.633 bits (1755), Expect = 0.000e+0 Identity = 348/613 (56.77%), Postives = 443/613 (72.27%), Query Frame = 0 Query: 24 GLPFAGVPSELAEKAKAILETEPEHPKADIHFEQS--GVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASWDAH 634 GLPFAGVP E+ +L+TEPEHP+ ++ FE + +LR + P+ + ++L + V +E L+LQAGP LTQ GID I RDS L + VAY S++V VA + R++ R+ +M DLRVRVF+ LQR SL F+T KAGV+MTRMTSDI+ L L Q+GL AVQ LT+VV+T+V+FT LA I +V++VP + LS+WF RAS + Y VRD IA V++DLSESL GVR +TA+NR+RHN HH V + DANVR + +IY P+ + IG+ GQ LL IG NMV DG+L++GEL AFLL L AFF PIQQLVQLYN+YQQGQ+++ K+R LL+ P V EAP A +LP ++G + L VTFGY D PV+ D+ L I GET+A VGPTGAGKST+AKLVTRFYDP G + +DG DLR V + SLR Q+GVVPQEPFLF G + DN+ FA D + D I EA VGL D++ RLPDG+D+VV ERG SLSSGERQL+ALARAF+A+PRVL+LDEATSNLDL SE+ IE ALD +LEGRTAI+IAHRL+TAM+ADRI V+D+GR++E+G HD LVAA G Y M+A+W + Sbjct: 21 GLPFAGVPPEMQASVDRLLKTEPEHPEPEVVFEHGRPDPDGAGLSLRRLIRPYWSMVLLAGVFVALEALTLQAGPKLTQIGIDDGITARDSGTLVLVAVAYLVSLVVTGVAQAARVKVTGRIAACVMNDLRVRVFTQLQRLSLSFYTGEKAGVIMTRMTSDIENLQQLLQEGLAQFAVQGLTMVVVTVVLFTFDVRLALITIVMIVPVLTALSLWFHRASGKGYVRVRDTIADVIADLSESLQGVRSVTAHNRQRHNTEHHRQVTGKYYDANVRTGRINSIYTPSTQVIGVAGQLALLAIGANMVADGELTIGELVAFLLSLGAFFQPIQQLVQLYNTYQQGQSSIVKLRDLLSARPEVEEAPGAVDLPKVEGEIVLEDVTFGYEPDRPVISDVSLDIRAGETVAFVGPTGAGKSTLAKLVTRFYDPTAGRILIDGRDLRDVRIESLRRQIGVVPQEPFLFAGPLRDNICFAASDTSDDRIREALRVVGLVDVVERLPDGLDTVVQERGQSLSSGERQLVALARAFLAQPRVLILDEATSNLDLRSESKIEEALDALLEGRTAILIAHRLSTAMKADRIVVVDEGRIVEVGAHDQLVAADGKYTQMYATWTSQ 633
BLAST of abc transporter vs. nr
Match: gi|746627419|ref|WP_039653149.1| (ABC transporter ATP-binding protein [Streptomyces sp. MUSC 125] >gi|745645369|gb|KIE26514.1| ABC transporter ATP-binding protein [Streptomyces sp. MUSC 125]) HSP 1 Score: 678.707 bits (1750), Expect = 0.000e+0 Identity = 347/613 (56.61%), Postives = 445/613 (72.59%), Query Frame = 0 Query: 24 GLPFAGVPSELAEKAKAILETEPEHPKADIHFEQS--GVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASWDAH 634 GLPFAGVP E+ +L+ EP+HP+ ++ FE + +LR + P+ ++L + V +E L+LQAGP LTQ GID I +DS L + VAY AS++V VA + R++ R+ +M DLRVRVF+ LQR SL+F+T KAGV+MTRMTSDI+ L L QDGL AVQ LT+VV+T+V+FT LA I +V+VVP + LS+WF RAS + Y VRD IA V++DLSESL GVR +TA+NR+RHN HH V + DANVR + +IY P+ + IG+ GQ LL +G NMV DG+L++GEL AFLL L AFF PIQQLVQLYN+YQQGQ+++ K+R LL+T P+ EAP A +LP ++G + VTFGY D PV+ D+ L I GET+A VGPTGAGKST+AKLVTRFYD G + +DG DLR V + SLR Q+GVVPQEPFLF G + DN+ FA PD + D I EA VGL D++ RLPDG+D+VV ERG SLSSGERQL+ALARAF+A+PRVLVLDEATSNLDL SE+ IE ALDV+LEGRTAI+IAHRL+TAM+ADRI V+D+GR++E+G+HD L+AA G Y M+A+W + Sbjct: 21 GLPFAGVPPEMQASVDKLLKAEPDHPEPEVVFEHGRPDPDGAKLSLRRLIRPYWPMVLLAGVFVALEALTLQAGPKLTQIGIDDGITAKDSGTLVLVAVAYLASLVVTGVAQAARVKVTGRIAAWVMNDLRVRVFTQLQRLSLNFYTGEKAGVIMTRMTSDIENLQQLLQDGLAQFAVQGLTMVVVTVVLFTFDVRLALITIVLVVPVLTALSLWFHRASGKGYVRVRDTIADVIADLSESLQGVRSVTAHNRQRHNTEHHRQVTGKYYDANVRTGRINSIYTPSTQVIGVAGQLALLAVGANMVADGELTIGELVAFLLSLGAFFQPIQQLVQLYNTYQQGQSSIVKLRDLLSTRPAAEEAPGAVDLPKVEGEIVFEDVTFGYVPDRPVISDVSLDIRAGETVAFVGPTGAGKSTLAKLVTRFYDTTSGRILIDGRDLRDVRIESLRRQIGVVPQEPFLFAGPLRDNIRFAAPDTSDDRIREALRVVGLVDVVERLPDGLDTVVQERGQSLSSGERQLVALARAFLAQPRVLVLDEATSNLDLRSESKIEEALDVLLEGRTAILIAHRLSTAMKADRIVVVDEGRIVEVGSHDQLLAADGKYTQMYATWTSQ 633
BLAST of abc transporter vs. nr
Match: gi|1242610967|ref|WP_095755425.1| (ABC transporter ATP-binding protein [Streptomyces sp. SA15] >gi|1241366501|gb|PAZ10000.1| ABC transporter ATP-binding protein [Streptomyces sp. SA15]) HSP 1 Score: 673.315 bits (1736), Expect = 0.000e+0 Identity = 343/609 (56.32%), Postives = 443/609 (72.74%), Query Frame = 0 Query: 25 LPFAGVPSELAEKAKAILETEPEHPKADIHFEQS--GVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASW 631 L FAGVP E+ +L+TEPEHP+ ++ FE S + T TLR + +R ++L +LVV+E L+LQAGP LTQ GID I +DS L + + Y S++V +A + R+R R+ +M DLR RVF+ LQR SL+F+T KAGV+MTRMT DI+ L L QDGL AVQ LT+VV+++V+FT + LA I +V+VVP + + S+WF+RAS + Y VRD A V +DLSESL GVR++TA NR+RHN HH V + DANV+ + +G++Y P + IG+ GQ +LL IG +MV D QL++GEL AFLL L AFF PIQQLVQ +N+YQQGQ+++ K+R LL+T P V EA A +LP I+G + VTFGY D PV+ + L I GET+A VGPTGAGKST+AKLVTRFYDP G + +DG DLR V + SLR QLGVVPQEPFLF G + DN+ FA PDA+ + + EA VGL D++ RLPDG+D+VV ERG SLSSGERQL+ALARAF+A+PRVLVLDEATSNLDL SE+ IE ALDV+LEGRTAI+IAHRL+TAM+ADRI V+D+GR++E+G+HD LVAA G Y M+A+W Sbjct: 22 LKFAGVPPEMQAGVDKLLKTEPEHPEPEVVFEHSRPDPDGTALTLRRLIRHYRPMVLLAGVLVVVEALTLQAGPKLTQIGIDDGITAKDSGTLALVAIVYLLSLVVTGLAQAARVRVTGRISAWVMNDLRTRVFTQLQRLSLNFYTGEKAGVIMTRMTGDIENLQQLLQDGLAQFAVQGLTMVVVSVVLFTYNVELALITIVLVVPVLTVFSLWFRRASAKGYLRVRDTTANVTADLSESLQGVRIVTAYNRQRHNTEHHREVTGKYYDANVQTARIGSLYTPGTQFIGVAGQIVLLAIGASMVADRQLTIGELVAFLLSLGAFFQPIQQLVQQFNTYQQGQSSMVKLRQLLSTRPEVEEASAAVDLPRIEGEVVFDDVTFGYLPDRPVISHVSLEIRAGETVAFVGPTGAGKSTLAKLVTRFYDPTSGRILIDGRDLRDVRIDSLRRQLGVVPQEPFLFAGPLRDNLRFAAPDASEERVREALRVVGLVDVVERLPDGLDTVVQERGQSLSSGERQLVALARAFLAQPRVLVLDEATSNLDLRSESRIEEALDVLLEGRTAILIAHRLSTAMKADRIVVVDEGRIVEVGSHDQLVAADGKYTRMYATW 630
BLAST of abc transporter vs. nr
Match: gi|1200519283|gb|OUW32464.1| (ABC transporter ATP-binding protein [Actinobacteria bacterium TMED172]) HSP 1 Score: 672.159 bits (1733), Expect = 0.000e+0 Identity = 350/620 (56.45%), Postives = 468/620 (75.48%), Query Frame = 0 Query: 15 SASQTAARNGLPFAGVPSELAEKAKAILETEPEHPKADIHFEQSGVETTPFTLRSFLGPHRNKLVLVALLVVIETLSLQAGPLLTQRGIDRAIVPRDSSALWWIGVAYAASILVNLVASSIRIRFANRVGEGLMYDLRVRVFSHLQRQSLDFFTTSKAGVLMTRMTSDIDALTVLFQDGLVNLAVQALTLVVITIVMFTLSPTLAAILLVIVVPAMLLLSVWFKRASERNYALVRDKIALVLSDLSESLAGVRVITANNRRRHNNIHHANVVNGHRDANVRASTVGAIYGPANEAIGIIGQAMLLLIGGNMVLDGQLSVGELFAFLLYLTAFFAPIQQLVQLYNSYQQGQAAVTKIRGLLATEPSVLEAPDAYELPPIDGRLELSGVTFGYSDDEPVLFDLDLVIEPGETIAVVGPTGAGKSTVAKLVTRFYDPQVGTVKLDGHDLRAVTVHSLRSQLGVVPQEPFLFNGTIGDNVSFARPDATADEILEACEAVGLTDMLSRLPDGVDSVVHERGSSLSSGERQLLALARAFMARPRVLVLDEATSNLDLASETIIERALDVVLEGRTAIVIAHRLATAMRADRIAVIDDGRLIELGTHDDLVAAGGHYAAMFASWDAH 634 SA+Q++A GLPFAGVPSE+ + A IL EP+HP+ + F Q TT TLRS + +L+ IET++ GP+LTQ+GID ++ + AL++ +A I++N + S R R+ R+GE +MYD+RV +FSH QR LD++T+ K+GVL++RMTSD++ALT+L +G VNL +Q LT+ V+T+V+F+ +P LA +LL +V+P ++++++WF+ SER YA VRDKIA VL+DLSE+L+GVRVI A NRRR N H NVV + DAN+ + GAIYGPA E IGI QA++LL+GG MVLDG L VGEL AF+L++ FFAPIQQ+VQLYN+YQQGQ+ + KI +L+T+PSV E PDA LP I+GR+ V F Y++ +L +L+L I+PGET A VGPTGAGKST+AKL++RFYDP G V +D HDL+AVT+ SLR+QLGVVPQEPFLF+GTI DNV+FARPDAT +E+L A + VGL + + L +G+ ++VHERG SLS+GERQL+ALARAF++RPRVLVLDEATS+LDL SE +ER LD +LEGRTAI+IAHRLATAM+ADRIAV+D G +IELG+H +L+ GG Y+ MFA+W +H Sbjct: 13 SATQSSASAGLPFAGVPSEMEQGASRILANEPQHPEPMLSFRQIAERTTRLTLRSLFENRLGAALWGLVLLAIETVTALLGPVLTQQGIDNGVMQNNRDALYFAVFLFALVIIINALTSFWRQRWNGRLGEDIMYDVRVELFSHYQRMGLDWYTSEKSGVLLSRMTSDVEALTLLVNEGFVNLVIQGLTVSVVTVVLFSYNPVLALLLLGLVLPPLVVMTLWFRSVSERGYASVRDKIASVLADLSENLSGVRVIAALNRRRQNAELHRNVVGKYLDANLYTARAGAIYGPATEGIGIAAQAIVLLVGGWMVLDGSLQVGELAAFVLFVNTFFAPIQQMVQLYNTYQQGQSGLHKISQILSTQPSVPENPDALPLPAIEGRIRFDSVHFQYNEGHEILTNLNLEIQPGETFAFVGPTGAGKSTIAKLISRFYDPIRGKVLIDEHDLQAVTLDSLRTQLGVVPQEPFLFHGTIRDNVAFARPDATDEEVLVAIKHVGLEETVGGLAEGMHTLVHERGVSLSAGERQLIALARAFLSRPRVLVLDEATSSLDLHSEAKVERVLDGLLEGRTAILIAHRLATAMKADRIAVVDAGGIIELGSHQELIDLGGRYSEMFATWSSH 632 The following BLAST results are available for this feature:
BLAST of abc transporter vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 18
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BLAST of abc transporter vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of abc transporter vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold11167_size2062:67..1974+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold11167_size2062-processed-gene-0.0 ID=snap_masked-scaffold11167_size2062-processed-gene-0.0|Name=abc transporter|organism=Tigriopus kingsejongensis|type=gene|length=1908bp|location=Sequence derived from alignment at scaffold11167_size2062:67..1974+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'abc transporter' has the following synonyms
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