60s ribosomal protein l27a, snap_masked-scaffold127_size327531-processed-gene-2.17 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 60s ribosomal protein l27a vs. L. salmonis genes
Match: EMLSAG00000012539 (supercontig:LSalAtl2s:LSalAtl2s923:150712:153740:1 gene:EMLSAG00000012539 transcript:EMLSAT00000012539 description:"maker-LSalAtl2s923-augustus-gene-0.23") HSP 1 Score: 261.922 bits (668), Expect = 2.760e-87 Identity = 123/141 (87.23%), Postives = 130/141 (92.20%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKT 141 MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHA+ NQYCP VNLDKLWSLVSEQTR KY K+ KKAPVIDV++AG+FKVLGKG LP QPVIVKAR FSR+AEEKIK Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHAHTINQYCPSVNLDKLWSLVSEQTREKYAKDKKKAPVIDVTKAGYFKVLGKGLLPNQPVIVKARLFSRKAEEKIKSV 141
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|12230515|sp|P57728.1|RL28B_SCHPO (RecName: Full=60S ribosomal protein L28-B) HSP 1 Score: 181.415 bits (459), Expect = 9.510e-58 Identity = 93/147 (63.27%), Postives = 112/147 (76.19%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKY-EKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKTECLDE 146 M T+ KTRKLRGHVS GHGR+GKHRKHPGGRG AGG H R +FDKYHPGYFGKVGMR FH+ N + P VNLD+LW+LV +TR KY KNT+ APVI+V ++G+ KVLGKG LP PVI++ R+ SR+AEEKIK+ + E Sbjct: 1 MPTHTSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRRFHLMKNP--LWRPTVNLDRLWTLVPNETREKYLGKNTEVAPVINVLQSGYGKVLGKGRLPDTPVIIQTRYVSRRAEEKIKQAGGVVE 145
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|20143883|sp|Q9LR33.1|R27A2_ARATH (RecName: Full=60S ribosomal protein L27a-2) HSP 1 Score: 181.03 bits (458), Expect = 1.265e-57 Identity = 93/142 (65.49%), Postives = 110/142 (77.46%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPK-QPVIVKARFFSRQAEEKIKKT 141 M+T KK RK RGHVS GHGR+GKHRKHPGGRGNAGG HHHRI FDKYHPGYFGKVGMR FH N+ +CP VNLDKLWSLV E + K K+ P+IDV++ GFFKVLGKG+LP+ +P +VKA+ S+ AE+KIK+ Sbjct: 1 MATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNK--FFCPIVNLDKLWSLVPEDVKAKSSKDN--VPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEA 138
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|1710530|sp|P49637.2|R27A3_ARATH (RecName: Full=60S ribosomal protein L27a-3) HSP 1 Score: 179.874 bits (455), Expect = 2.660e-57 Identity = 93/142 (65.49%), Postives = 110/142 (77.46%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPK-QPVIVKARFFSRQAEEKIKKT 141 M+T KK RK RGHVS GHGR+GKHRKHPGGRGNAGG HHHRI FDKYHPGYFGKVGMR FH N+ +CP VNLDKLWSLV E + K K+ P+IDV++ GFFKVLGKG+LP+ +P +VKA+ S+ AE+KIK+ Sbjct: 1 MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNK--FFCPIVNLDKLWSLVPEDVKAKSTKDN--VPLIDVTQHGFFKVLGKGHLPENKPFVVKAKLISKTAEKKIKEA 138
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|1350711|sp|P48160.1|RL27A_DICDI (RecName: Full=60S ribosomal protein L27a) HSP 1 Score: 179.489 bits (454), Expect = 5.171e-57 Identity = 91/140 (65.00%), Postives = 107/140 (76.43%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKY-EKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139 M T K RK RG V G+GRVGKHRKHPGGRGNAGG HHRINFDKYHPGYFGK+GMR+FH+ NQ +CP V+L+K+W+LV E R KN APV+DV++ GFFKVLG G LP QP+IVKAR+FS+ AE+KIK Sbjct: 1 MPTRFSKHRKSRGDVCAGYGRVGKHRKHPGGRGNAGGLTHHRINFDKYHPGYFGKLGMRHFHLLRNQ--YHCPTVSLEKIWTLVPESVRKSLAAKNDGTAPVVDVTQKGFFKVLGHGILPTQPIIVKARYFSKVAEKKIK 138
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|1350705|sp|P48161.1|RL27A_EUPCR (RecName: Full=60S ribosomal protein L27a; AltName: Full=L29) HSP 1 Score: 178.333 bits (451), Expect = 1.199e-56 Identity = 86/141 (60.99%), Postives = 110/141 (78.01%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKT 141 M+ +K+ TRKLRGHVSHGHGRVGKHRKHPGGRG AG +HHHRIN KYHPG+ GK GMR+FH+ NQ YCP +NL KLWSLV+E+ R K + + K +IDV + G++KVLGKG LP+ P++VKA+ F+ AE++IK+ Sbjct: 1 MTHSKRNTRKLRGHVSHGHGRVGKHRKHPGGRGMAGPEHHHRINVFKYHPGHIGKHGMRHFHLMRNQ--YYCPSINLSKLWSLVTEEERQKAQTDKSKVILIDVVKHGYYKVLGKGLLPEVPLVVKAKLFTPTAEKRIKQV 139
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|1710529|sp|P36585.3|RL28A_SCHPO (RecName: Full=60S ribosomal protein L28-A; AltName: Full=L27A; AltName: Full=L29) HSP 1 Score: 178.333 bits (451), Expect = 1.444e-56 Identity = 92/147 (62.59%), Postives = 112/147 (76.19%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKY-EKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKTECLDE 146 M T+ KTRKLRGHVS GHGR+GKHRKHPGGRG AGG H R +FDKYHPGYFGKVGMR FH+ N + P VNLD+LW+L+ + R KY KNT+ APVI+V ++G+ KVLGKG LP+ PVIV+ R+ SR+AEEKIK+ + E Sbjct: 1 MPTHVSKTRKLRGHVSAGHGRIGKHRKHPGGRGKAGGLQHLRSHFDKYHPGYFGKVGMRRFHLMKNP--LWRPTVNLDRLWTLLPNEARDKYLGKNTEVAPVINVLQSGYGKVLGKGRLPETPVIVQTRYVSRRAEEKIKQAGGVVE 145
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|308153561|sp|P02406.3|RL28_YEAST (RecName: Full=60S ribosomal protein L28; AltName: Full=L27a; AltName: Full=L29; AltName: Full=Large ribosomal subunit protein uL15; AltName: Full=RP44; AltName: Full=RP62; AltName: Full=YL24) HSP 1 Score: 176.407 bits (446), Expect = 7.029e-56 Identity = 92/148 (62.16%), Postives = 107/148 (72.30%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKK--APVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKTECLDE 146 M + KTRK RGHVS G GR+GKHRKHPGGRG AGGQHHHRIN DKYHPGYFGKVGMR F H Q + + P +NLDKLW+L+ E R +Y K+ K APVID AG+ K+LGKG +P PVIVKARF S+ AEEKI+ + E Sbjct: 1 MPSRFTKTRKHRGHVSAGKGRIGKHRKHPGGRGMAGGQHHHRINMDKYHPGYFGKVGMRYF--HKQQAHFWKPVLNLDKLWTLIPEDKRDQYLKSASKETAPVIDTLAAGYGKILGKGRIPNVPVIVKARFVSKLAEEKIRAAGGVVE 146
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|132845|sp|P08978.1|RL28_NEUCR (RecName: Full=60S ribosomal protein L28; AltName: Full=CRP1; AltName: Full=L27A; AltName: Full=L29) HSP 1 Score: 174.481 bits (441), Expect = 4.354e-55 Identity = 88/148 (59.46%), Postives = 109/148 (73.65%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKN--TKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKTECLDE 146 M T KTRK RGHVS G GRVGKHRKHPGGRG AGGQHHHR N DKYHPGYFGKVGMR+FH+ N +Q+ P +N++KLW+LV + R KY T+ APVID+ G+ K+LGKG LP+ P++V+AR+ S +AE KIK+ + E Sbjct: 1 MPTRFSKTRKHRGHVSAGKGRVGKHRKHPGGRGMAGGQHHHRTNLDKYHPGYFGKVGMRHFHLLRN--HQWAPILNIEKLWTLVPAEAREKYVSGAATETAPVIDLLSHGYAKLLGKGRLPQVPIVVRARYVSAEAERKIKEAGGVIE 146
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|2500274|sp|P78987.1|RL27A_BLUGH (RecName: Full=60S ribosomal protein L27a; AltName: Full=L29) HSP 1 Score: 169.859 bits (429), Expect = 2.528e-53 Identity = 88/148 (59.46%), Postives = 106/148 (71.62%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKY--EKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKTECLDE 146 M T+ KTRK RGHVS GHGRVGKHRKHPGGRG AGGQHHHR N DKYHPGYFGKVGMR FH N + + P +NL+KLWSL+ + R Y N PVID+ G+ KVLGKG +PK P++V+AR+FS++AE KI + + E Sbjct: 1 MPTHLSKTRKHRGHVSAGHGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHPGYFGKVGMRYFHKQGN--HFWKPVLNLEKLWSLIPAEKREAYLSSTNPDVIPVIDLLPLGYSKVLGKGRIPKVPLVVRARWFSKEAERKITEAGGVVE 146
BLAST of 60s ribosomal protein l27a vs. SwissProt
Match: gi|400993|sp|Q00454.1|RL27A_TETTH (RecName: Full=60S ribosomal protein L27a) HSP 1 Score: 169.474 bits (428), Expect = 3.744e-53 Identity = 88/140 (62.86%), Postives = 107/140 (76.43%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGG--QHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKI 138 M ++ KKTRKLRGHVSHGHGRVGKHRK G HHHRI +K+HPGY+GK+GMR FH+ N +CP VN+DKLWSLVS+ TR KY ++ KK PVIDV++AGFFKVLGKG LP QPV+VKA++FS+ AE +I Sbjct: 1 MVSHLKKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGMRTFHLKKNP--LHCPVVNIDKLWSLVSDATRQKYAEDKKKVPVIDVTKAGFFKVLGKGRLPNQPVVVKAKYFSKTAERRI 138
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|225712762|gb|ACO12227.1| (60S ribosomal protein L27a [Lepeophtheirus salmonis] >gi|225713762|gb|ACO12727.1| 60S ribosomal protein L27a [Lepeophtheirus salmonis] >gi|290462325|gb|ADD24210.1| 60S ribosomal protein L27a [Lepeophtheirus salmonis] >gi|290562277|gb|ADD38535.1| 60S ribosomal protein L27a [Lepeophtheirus salmonis]) HSP 1 Score: 257.299 bits (656), Expect = 2.505e-85 Identity = 123/139 (88.49%), Postives = 130/139 (93.53%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139 MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHA+ NQYCP VNLDKLWSLVSEQTR KY K+ KKAPVIDV++AG+FKVLGKG LP QPVIVKAR FSR+AEEKIK Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHAHTINQYCPSVNLDKLWSLVSEQTREKYAKDKKKAPVIDVTKAGYFKVLGKGLLPNQPVIVKARLFSRKAEEKIK 139
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961374964|gb|ALS04226.1| (60S ribosomal protein L27a [Acartia pacifica]) HSP 1 Score: 251.521 bits (641), Expect = 4.988e-83 Identity = 119/139 (85.61%), Postives = 128/139 (92.09%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139 MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N NQ+CP +NLDKLW+LV E+TR+K K+TK APVID S AG+FKVLGKG LPKQPVIVKARFFSR+AEEKIK Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNVSNQFCPAINLDKLWTLVPEETRVKAAKDTKTAPVIDCSGAGYFKVLGKGILPKQPVIVKARFFSRRAEEKIK 139
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|1325300846|ref|XP_023332015.1| (60S ribosomal protein L27a-like [Eurytemora affinis]) HSP 1 Score: 250.751 bits (639), Expect = 1.017e-82 Identity = 121/139 (87.05%), Postives = 124/139 (89.21%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139 MST KKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N N YCP +NLDKLWSLVSEQTR KY KAPVID SRAG+FKVLGKG LPKQPVIVKARFFSR AEEKIK Sbjct: 1 MSTCKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNISNNYCPAINLDKLWSLVSEQTRTKYADVKDKAPVIDCSRAGYFKVLGKGVLPKQPVIVKARFFSRVAEEKIK 139
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961376548|gb|ALS05018.1| (60S ribosomal protein L27a [Centropages dorsispinatus]) HSP 1 Score: 249.21 bits (635), Expect = 4.609e-82 Identity = 118/139 (84.89%), Postives = 125/139 (89.93%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139 MST KKKTRKLRGHVSHGHGR+GKHRKHPGGRGN+GGQHHHRINFDKYHPGYFGKVGMRNFHVH N N +CP +NLDKLW+LVSEQTR KY T KAPVID +RAG FKVLGKG LPKQPVIVKARFFSR+AEEKIK Sbjct: 1 MSTCKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNSGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNISNNFCPAINLDKLWTLVSEQTRTKYASVTDKAPVIDCNRAGIFKVLGKGALPKQPVIVKARFFSRRAEEKIK 139
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961375786|gb|ALS04637.1| (60S ribosomal protein L27a [Pseudodiaptomus poplesia] >gi|961376096|gb|ALS04792.1| 60S ribosomal protein L27a [Pseudodiaptomus poplesia] >gi|1148369128|gb|AQS22800.1| 60S ribosomal protein l27a [Pseudodiaptomus poplesia]) HSP 1 Score: 248.44 bits (633), Expect = 9.932e-82 Identity = 119/139 (85.61%), Postives = 125/139 (89.93%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139 MST KKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N +CP +NLDKLW+LVSEQTR KY + KAPVID SRAGFFKVLGKG LPKQPVIVKARFFSR+AEEKIK Sbjct: 1 MSTQKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNMSIHHCPAINLDKLWTLVSEQTRKKYADSKDKAPVIDCSRAGFFKVLGKGVLPKQPVIVKARFFSRRAEEKIK 139
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961374966|gb|ALS04227.1| (60S ribosomal protein L27a [Acartia pacifica]) HSP 1 Score: 246.514 bits (628), Expect = 5.309e-81 Identity = 118/139 (84.89%), Postives = 127/139 (91.37%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139 MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N NQ+ P +NLDKLW+LV E+TR+K K+TK APVID S AG+FKVLGKG LPKQPVIVKARFFSR+AEEKIK Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNVSNQFRPAINLDKLWTLVPEETRVKAAKDTKTAPVIDCSGAGYFKVLGKGILPKQPVIVKARFFSRRAEEKIK 139
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|225718318|gb|ACO15005.1| (60S ribosomal protein L27a [Caligus clemensi]) HSP 1 Score: 243.817 bits (621), Expect = 6.964e-80 Identity = 122/141 (86.52%), Postives = 130/141 (92.20%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKT 141 MSTNKKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHA+ NQYCP VNLDKLWSLVS+QTR KY K+ KKAPVIDV++AG+FKVLGKG LP QPVIVKAR FSR+AEEKIK Sbjct: 1 MSTNKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHAHTANQYCPSVNLDKLWSLVSDQTRDKYAKDKKKAPVIDVTKAGYFKVLGKGLLPDQPVIVKARLFSRKAEEKIKSV 141
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961375782|gb|ALS04635.1| (60S ribosomal protein L27a [Pseudodiaptomus poplesia] >gi|961375784|gb|ALS04636.1| 60S ribosomal protein L27a [Pseudodiaptomus poplesia]) HSP 1 Score: 240.35 bits (612), Expect = 1.481e-78 Identity = 116/139 (83.45%), Postives = 123/139 (88.49%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139 MST KKKTRKLRGHVSHGHGR+GKHRKH GGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFH H+N Y P +NLDKLW+LVSEQTR KY + KAPVID SRAG FKVLGKG+LPKQPVIVKARFFSR+AEEKIK Sbjct: 1 MSTCKKKTRKLRGHVSHGHGRIGKHRKHSGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHKHSNLAVYYSPTINLDKLWTLVSEQTRKKYADSKDKAPVIDCSRAGIFKVLGKGSLPKQPVIVKARFFSRRAEEKIK 139
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|961376440|gb|ALS04964.1| (60S ribosomal protein L27a [Pseudodiaptomus poplesia]) HSP 1 Score: 237.654 bits (605), Expect = 1.494e-77 Identity = 115/139 (82.73%), Postives = 120/139 (86.33%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139 MST KKTRKL GHVSHGHGR+GKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVH N +CP +NLDKLW+LVSEQT KY KAPVID S AGFFKVLGKG LPKQPVIVKARFFSR+AEEKIK Sbjct: 1 MSTQNKKTRKLPGHVSHGHGRIGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHPNMSIHHCPAINLDKLWTLVSEQTMKKYADRKDKAPVIDCSIAGFFKVLGKGVLPKQPVIVKARFFSRRAEEKIK 139
BLAST of 60s ribosomal protein l27a vs. nr
Match: gi|559373032|gb|AHB12474.1| (60S Ribosomal Protein L27A [Pantala flavescens]) HSP 1 Score: 237.654 bits (605), Expect = 1.796e-77 Identity = 113/139 (81.29%), Postives = 128/139 (92.09%), Query Frame = 0 Query: 1 MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHPGYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAPVIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIK 139 MST+KKKTRKLRGHVSHGHGR+GKHRKHPGGRGNAGG HHHRINFDKYHPGYFGKVGMRNFH+ N+ +CP +NLDKLW+LVSEQTRLKY++N +KAPVIDV +AG++KVLGKG LPKQPVIV+A+FFSR AEEKIK Sbjct: 1 MSTHKKKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGMHHHRINFDKYHPGYFGKVGMRNFHLRKNK--LWCPSINLDKLWTLVSEQTRLKYKENKEKAPVIDVVKAGYYKVLGKGRLPKQPVIVRAKFFSRSAEEKIK 137 The following BLAST results are available for this feature:
BLAST of 60s ribosomal protein l27a vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 60s ribosomal protein l27a vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of 60s ribosomal protein l27a vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold127_size327531:242568..248881- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold127_size327531-processed-gene-2.17 ID=snap_masked-scaffold127_size327531-processed-gene-2.17|Name=60s ribosomal protein l27a|organism=Tigriopus kingsejongensis|type=gene|length=6314bp|location=Sequence derived from alignment at scaffold127_size327531:242568..248881- (Tigriopus kingsejongensis)back to top Synonyms
The feature '60s ribosomal protein l27a' has the following synonyms
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