snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1, snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview


Name	snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1
Unique Name	snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1
Type	mRNA
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold127_size327531	supercontig	scaffold127_size327531:242568..248881 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
60s ribosomal protein l27a	snap_masked-scaffold127_size327531-processed-gene-2.17	Tigriopus kingsejongensis	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1:exon:1243	snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1:exon:1243	Tigriopus kingsejongensis	exon
snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1:exon:1244	snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1:exon:1244	Tigriopus kingsejongensis	exon
snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1:cds	snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1:cds	Tigriopus kingsejongensis	exon
snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1:cds	snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1:cds-2012950	Tigriopus kingsejongensis	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
polypeptide-auto2012951	auto2012951	Tigriopus kingsejongensis	polypeptide
Tk07886	Tk07886	Tigriopus kingsejongensis	polypeptide

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at scaffold127_size327531:242568..248881-

protein sequence of Tk07886

>Tk07886 ID=Tk07886|Name=Tk07886|organism=Tigriopus kingsejongensis|type=polypeptide|length=192bp
MSTNKKKTRKLRGHVSHGHGRVGKHRKHPGGRGNAGGQHHHRINFDKYHP
GYFGKVGMRNFHVHANQPNQYCPGVNLDKLWSLVSEQTRLKYEKNTKKAP
VIDVSRAGFFKVLGKGNLPKQPVIVKARFFSRQAEEKIKKTECLDEYKQI
LQKVWVPARLGQLNQQRLWLRNHFVTGLSQSYSAQMELCRVL

mRNA from alignment at scaffold127_size327531:242568..248881-

Legend: polypeptideexon

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1 ID=snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1|Name=snap_masked-scaffold127_size327531-processed-gene-2.17-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=6314bp|location=Sequence derived from alignment at scaffold127_size327531:242568..248881- (Tigriopus kingsejongensis)
ATGAGTACGAATAAGAAGAAGACCAGGAAGCTCCGTGGGCACGTGTCCCA
TGGACACGGTCGCGTCGGCAAGCACCGCAAGCATCCCGGAGGTCGCGGAA
ACGCTGGTGGACAGCATCATCACCGCATCAATTTCGACAAGTATCATCCG
GGTTACTTCGGCAAGGTGGGCATGAGGAACTTCCACGTCCACGCCAATCA
GCCCAACCAGTACTGCCCCGGAGTGAATCTGGACAAGCTGTGGTCTCTGG
TGAGCGAGCAAACTCGCCTCAAGTACGAGAAGAACACCAAGAAGGCTCCC
GTCATCGACGTGTCCAGGGCCGGTTTCTTCAAGGTGCTCGGCAAGGGCAA
TCTGCCCAAGCAGCCCGTCATTGTGAAGGCTCGATTCTTCTCGCGTCAAG
CCGAAGAGAAGATCAAGAAAGTGGGTGGTGCCTGCGTTCTGACCGCCTAA
GGCGGATTATTAATGAATGAGAATACACGCTTGGACCTTATTGACCTCGA
TAGGGATAACACCTGTGGCTATTTCAGCTACAATTTCACCGCGACAAAGG
TTTAAACTCGTGTTTGAAGAATTAACCGTTCGCCTAAAAGAACGCTCGAG
CATGGGGGTTAAGATCGGATCTTCGTGTGAGAGGCACTCTCATCCATGAT
TAAGTTCACACTTCATTGCTGCTGTCCGCCAATGTTTATCTAGCGAGCAT
AATTGGATTCCCCATTTTTGTGAAAATGAGTGGCTCGCAATCGATCCCAA
GAACAGGGAACTCTGGCAAATAACAGGCATTCACATGGGATGTAGATTCC
GGGTGTTCGTAAGGTTAGAGGATTAAGAAGTACATTATTTTACCTTCTGG
AGACGCTTGCGAAAATCTTGTGTGGACTGGATCGAGTCTTTCATTCTCGG
TGGCCATTGTGACTTCTTGAGAAGCTCCTTCTGACGCAACTCTTGTTGGA
GTAGACGATAATTGGCGGCCTCCTTCTGCTTCTCGTAAGCGTAATTGGTA
AAAATGTGGGCAGGAAACTCCTTGGGCTTCATTTTGACCGTCCGGAGATC
AGGGGTGGATTGGGATTTGCGAAAGAAAAAGCTTTTCCGTGTCCTAGGGA
ACCTGGATCAGGAAGAATACACATAAGAATGTTTAGACAGGGATGAGAGT
GGTTGGCTACGTATTAGAATGTATTGGGATACGGATTACCTTTGTGGGTT
TTCTGCCACCATTTCGCTGAACAATGGACGATTGACATGGTCGGGGACGG
CCCTGGCCTGGAAATGGTGACGCTTCGGCTTATCTCGATGGGCAGCATTG
GGATTAGGTATTAGACCCTCCTTCCTCATCACATCCAGAACAGTAGCCCG
ATCCTTCTGTTTTTGCTCTTCCCTGGTAAACATGTATTCACGAAGAAAAA
AGTCATTGAATCTCAAAAAGAAGACGCGTAAAATATGTCATGCCTCCAGT
GAGAGTCGAACTCACGACCCCTGGTTTACGAGACCAGTGCTCTGCCACTG
AGCTATAGAGGCTTCGTATGAATTAAGGAAAGGAATTTTAATCATAAACG
GTTCTAACCTTGAACAATTTGCGTTGAAAATTGAGCGACAAGAATGCTAA
ATCCGTTTTGGTCTCTGGTTGCAGAAGTAATTTGCCCAATCAGCTCATTA
ACACCTAATCACATTGTTCAACCCCCGAGCGTCTAAGTTACGTCTAACAT
ACTGTACATTGCAAGCCCCAACCTAAGTTTTCGTATTTCCTTCACATGTA
ACTTTCTTTAAGGGCTCGAATCCTTTGGTTATAGACAATCTTCTCTATTT
TATATATGGATATGGGGGTTGGAAAAGAGGTAAAAGCTACTCTGTTCCCG
TCTTTTAATGAGAGCGGAACGAAGTGAGCGCCCTTGTGTATGAAAAAGTG
CAGGTGCAGAAGGTCCTTACGTTGCCGCGCTAATCTGATGCACCACGTTC
AAAGCATTACAAGGCACTTACCAAAAAATCTAAAATTCGCTGAAGCTCCC
AAATTGGTTTCATTGTTTCTCAAAAGGTAAAAGTTCACTTTTTAAGCCTC
CGTGGGGCTCTGATGTAATCCATGTATTCATGATTTACGTAAACCTCTTA
AGGAAATCTGGTCGGACGAAATTTAGGCCCATACTGCTTCCAATGCCTGT
CCATTTGTGTTTTGAAAATGGCGAATGAATTGGATTCGAGGGAAAATAAA
GAGTCTTGAGATGATTTTTTTAAAGTTTGATATAGCACTTGCATTCGTGA
ATGCTTCAGCCAGAGTCCCATTTACGCTCGAAGCCTTACCTCAGGGTCAT
TTGGAAGGGTTGGACGGCTATGGGTTTGACCCTCCTCTCCAGGGTTGAAG
CACTTTGGGCTCTGCGCCTCCTTTGGACCTTCCTCCGTTCATAGTGCATC
TCGAACTCTTCATCTTCAGAATTAGAGTCAACGCAATCAAATAGTTCCAG
TCCACCATTAGGCAGATGTGCTGGAGGAGCATTCGCGGAGTTGTGATAGT
CTGGACAAGTGTAGGACCAATCGGGACCACAGCCCGGCGAACAGCAACAA
CAACAAAGCTCTTGAGCCTGCATGTCCTCTTGGTTAATTCGCTCCAAGCG
TTCCAAGTTGTCCCGTTTGAGCTTTTCCAGGCGCTCCAAGAACCCAAGAC
CCTCGTCGGGACACGAACACTCGCGGTAGAGCCCGGGTTCGTATCCCTCC
ATGTTGGGTGTGAACTCCTCGGGGTATTCGGTCCAGAAATCACACGGCCA
TGAAGGCGCTGCAGGGTCGCTCTCAGAGGTGAGTGATTCATCCTCGGTCT
CGGTGGCGGTTCCAAATCCAGGTATCATCTCCACTGAGGATGAAGATGCT
GGCGGTGGATAGCGAAGAATCTGTGGGTCTTCGTTGAACGTCAAATGCTT
GCTACCTCCAAAGCGCTCCTCGGAAAGTTTGCGCTCATAAAGTGGTTTGG
GCATATGAGTGCGTTTGTCCAGAGGGGTCTTGATGCAGTGATTGGCAAAC
TGGGTAAAGGTGGACGGCATTTTCGTACATAACCGCTCGGGCGGCAATAT
CAACAACATGTATAACGAGGAATGCGTGTAGTGTTGGCCTTATAGAGAGC
CTTTCTCGATATCCTACCTCTTGGACCGCTCGCTTTCCCCTCCAAATTGG
GGGTGGTGGAACAGAAGCCTTCATTTCGGCCCTCGCTAGGGGAAAGTCTA
CTCCTAGAGGTGAGTCCAAGGTATCGTCCACCGAGGTTTGCATGGTTTTG
GGTCCTTTGTAAGTCTTGAACGATAATATCCCCTTTTATCTAATGCCTCT
GATAGAAGCCGAAGCAATCGTCTCCTATCATGGCACATGGAACCAAATCG
AATCCCAACCTTTGAGAAGTCCACTACACATGTTGGTCCTGCGTTAGTAA
CTGTGTCTCACAGTTGAAAAACTTGCCAAATTTAAGGAAAAACATAGGCA
CATAATTGTTCAATCCTGCTGCGTCAACTGTGCCAGTCTTCACTTGACTC
GTTTACACGTCACCTGTTTCAACTATAATATGCCAATTGTAGTAACCCAA
ATCGTTGGAATGTATTGGCAAAAGGGATATTTTTACAGTACCAGCGCGTT
GCATTTTACCTGATTTTGGAGGACACCTTTTTGAAAACACTTTCTTTTAG
GCTGCACTGGTCTTGAGCTAATATTTTTCGTTGCTTGTGACAATGTGAAA
AAGTCAAACGACAGAAAAGAGTGTGGATAGAAAAGCACTTGGGGAATCTA
TGATGTAATCGGCAATCACAGTGTACGTAAATGTAACAATGCGCCTGTTG
ACCAATTCATAATTTGACTGATTGGGTGCAATGTCAATTAATGAGCGATT
CAAAACGTGAAAAAATACTCGTTTATTAAACTATTATTGCTTTAACAAAC
AAGCAAGAACAGTTATGCGAAAGGTTATCCTGCCCGAAACACACTGGGAA
CCAAATCAACGGTTTGAAATCCCAATTTCCCTGTTAATTGTGCTGCATAT
GCATAAAACGGAAGAATAACAATTTAGCATAATAAATTCACATCCCTACT
TATTACATATTGGGGATGGGAAATTTATTTTCTTCCTGTCAAACAGTCAG
GGTGACCGCCGTCAATCACTCTGCCTATTTTAAAGTTAGTGGAAACTCAA
TTTACAATTCTTTCACGCATTGCAAAACTATGAATGTTAGCTTGAACATT
CATAGAATGCAAGGCAACAATTACACTCAGGATTTAAAGACACTCCCAAC
GACTAGAGGGCATTCCAACATTTACAGAAATTGGCTGTCTTTGGTCACCC
ATCTTCACCTGAAAACGAGGCCATGGCTGTTAATGGCTGTGTGTGGACAC
CGAAGTTTAATGCGAAAAAAGATTTCCTCTACCACCCTCGGAAAACGGTT
TAAACTTAAAAACTATTGAGTATCTTGCGAAAGGGGGACTTCGAGTTCGT
TTAGGGCAGATTTTTTTGGGATATAAAAGTAGAGGGAGGCCTGGGTTGAT
GTGAATTGGTGTCCAGTATGATTCATTTTCAGACCTCATTTTCAAGCACT
AATACACTCCTGATGTTCTCGACCACGAAGCACAAATTAATTGGCATTAT
TGCTATCTCGTCATATCTGCACTAAAACATGATAAAACTATAGCCAAATG
TCGTATGAACAAGCATATAACTCAGGAGGGATAACTTTTTGGAGGTGATA
TTGGATTTAGAGTCAGAACCGCTATCTTTTTTCAAGTTACGTTGGTTAGA
AACTTCCGGATACTATCATGGAAGTCAACTCTGGTACTTGTTTTGCGTGT
AATATAGTTACTCCCTCAATTTTTAGCATAGTCGTCCTCAGGTCTGTCCA
CAAGTTCGCTCGAAGCGCCTCCTGTGGCACAAAAGTGAACCACTTATGAC
GTTTCGTTTCACATCAGGAATAGGCCGAACTCATACTCCCAAGGCATTTC
CCTGCTCTTCAATCGATGATGAGATGGGCTAATTGTTTTTAGTCAATACT
CACAAATGGCTTTGAGGGGAGATCTTTTTTTAGACCTGTTATGTTCCCTG
CCACTCTAATACGTATGTATTGTACAGTATGTAGCGTAGACGCATCCTCG
CTCCATCTTATTTTCTTCTTGTGATCTTCCTTTTACCTTGAATAAAGTTC
ATATCTATCCTCGGGACATCCTCGGAACAAAAGAGAACCCTCCATATTGG
TTTCCAAGTGAATATGTTTCATAGTGTACTTCATTTGCACCCACATGCGA
ATTTGTTGGAATTCTTCCATTCCCCAAAAATGTATCACTTTCTGTGGCAT
AATGTTCAGGCTCATTTGTGTGATGTTCAACCTCTGACATCAATAGTATC
TCGAAAAAACACATGTGGAAGAGTATTATCAGGAAAACGAAGCTGAGTGT
GTTTCATTGTGTTGAAAGCAACTCCCCTCAGAGTGGATCTGCCGACAATT
CTAAATTTTGTCGCTGAAAACATTACTATTGGAAGAAGGGCTTTATGGAT
TAGATTGACTCTGACCTGTGAACATAGCAGCGAAATTAGAAGGTAATAAA
GTTTAAAATGATCATTGATTGGGAATTTTTACAGCACCTATGTCTGCTTT
AATCCGAACAATAAAACTCTTGAGTCCACCACACACTCTCTCGTGCAGCG
CAAGTACGTTCAGTACGACGTCTTAATTGCTTATAGACAGTTAAGGATCT
TGGCCAAGGATGAGTGTGAATGGGATTTCGATTAAGAATTCAATTGTATT
CTGAGCACAGTGCACACTTGCAGGAGACAAACAATACTCGATCATCGTAC
CCTTCCTTGACTATTACTTGGCGCGCAAGTGTGTTACTAAGTGATTGGCG
TGAACCATAATAAGCTTTGTAATGTGTATGTGTGTTCAATCTAGCATGTG
TCTTTGTCGCACATGGATTAACACTGAGCCACAAAGTACAAATGCAATAC
CGAGTGCCTGGTATTTTATGACGCTTTTTTGATTGGCAAATGTCAGTCGG
CGAATTGAACGCATTTCCAAATTTTGTGATGATCAGGCTTTAAGCGTCAT
TCTTCTGACTAAACTGGGGGGCTAAATCAAACATTGAGGGCTTTCTCAGC
AACTCTAGAGACAAATCTATAAGTGAATCAAATCGGGTTTAATCTGCAAA
TGCAGACTGAGTGTTTGGATGAATATAAGCAAATTCTTCAAAAAGTGTGG
GTGCCGGCGAGGTTGGGCCAATTGAACCAGCAGAGGTTGTGGCTGAGGAA
CCACTTCGTGACAGGGTTGTCTCAGAGCTACTCGGCCCAGATGGAGTTGT
GTCGGGTACTCTGA

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