39s ribosomal protein mitochondrial, snap_masked-scaffold15_size728074-processed-gene-0.1 (gene) Tigriopus kingsejongensis

Overview
Name39s ribosomal protein mitochondrial
Unique Namesnap_masked-scaffold15_size728074-processed-gene-0.1
Typegene
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Homology
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Match: EMLSAG00000011569 (supercontig:LSalAtl2s:LSalAtl2s800:159706:160242:-1 gene:EMLSAG00000011569 transcript:EMLSAT00000011569 description:"augustus_masked-LSalAtl2s800-processed-gene-1.10")

HSP 1 Score: 162.54 bits (410), Expect = 3.352e-51
Identity = 77/159 (48.43%), Postives = 109/159 (68.55%), Query Frame = 0
Query:   55 VRNRNPRNLEMMRIGYKPNGFQWERKSREYWNKLDLQITNQHTKAEVAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQRCLQAGISHVFLQIEKDDLQKERMTRFVNAIKEQGITIGEGKKYVQTEPHVRLN----RFRKHSKPWEVLDD 209
            +RN+NP NLE M+IGYKP GF  ++KS  YWN+L L+I+  HT A+V HWTG  V  AST EWAIRK LYN TDA AL  +  +I +R LQ G+  V LQ+ +++LQ+ERM+ FV +I++ G++  E  +Y Q  P  +L+    + + + KPWEV+D+
Sbjct:   20 IRNKNPLNLEHMKIGYKPQGFLLDKKSVSYWNRLFLEISQNHTTAKVIHWTGRPVAQASTREWAIRKHLYNYTDATALHLLGTIIGERTLQTGVLEVNLQMTQEELQRERMSSFVESIRKTGLSTSESFQYTQRNPFRQLSLASQKPKNNFKPWEVIDE 178          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|41017797|sp|Q9H0U6.1|RM18_HUMAN (RecName: Full=39S ribosomal protein L18, mitochondrial; Short=L18mt; Short=MRP-L18; AltName: Full=Mitochondrial large ribosomal subunit protein uL18m; Flags: Precursor)

HSP 1 Score: 105.916 bits (263), Expect = 1.321e-27
Identity = 54/137 (39.42%), Postives = 83/137 (60.58%), Query Frame = 0
Query:   48 DELIQTHVRNRNPRNLEMMRIGYKPNGFQWERKSREYWNKLDLQITNQHTKAEVAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQRCLQAGISHVFLQIEKDDLQKERMTRFVNAIKEQGITIGEGKK 184
            +E +     NRNPRNLE++ +  K  G++    SRE+W++L +  T  H +A V H  G  V  AST EWAI+K LY+T + VA E+I +V+AQRCL+AGI+ +  Q    +   + M R  +A+ E G+ + E ++
Sbjct:   41 NEAVAPEFTNRNPRNLELLSVARKERGWRTVFPSREFWHRLRVIRTQHHVEALVEHQNGKVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEAGINFMVYQPTPWEAASDSMKRLQSAMTEGGVVLREPQR 177          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|41017793|sp|Q9CQL5.1|RM18_MOUSE (RecName: Full=39S ribosomal protein L18, mitochondrial; Short=L18mt; Short=MRP-L18; Flags: Precursor)

HSP 1 Score: 104.76 bits (260), Expect = 3.578e-27
Identity = 60/173 (34.68%), Postives = 94/173 (54.34%), Query Frame = 0
Query:   12 RLLTRGMALGSGRSEVHTHLGPSPYIDESEKPLGPNDELIQTHVRNRNPRNLEMMRIGYKPNGFQWERKSREYWNKLDLQITNQHTKAEVAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQRCLQAGISHVFLQIEKDDLQKERMTRFVNAIKEQGITIGEGKK 184
            + L+    L  G + + T   P+   D   K     +E +     NRNPRNLE++ +  K  G+     +RE+W++L +  T  H +A V H  G  V  AST EWAI+K LY+T + VA E+I +V+AQRCL+AGI+ +  Q    +   + + R  NA+ E G+ + E ++
Sbjct:    9 KCLSVCRKLECGFAALSTSSVPAVQPDVESK----ENEAVAPEFTNRNPRNLELLGVARKERGWATVWPNREFWHRLRVVKTQHHVEAFVEHLNGQVVVSASTREWAIKKHLYSTRNVVACESIGRVLAQRCLEAGINFMVYQPTPWEASSDSIKRLQNAMTESGVMLREPRR 177          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|115502821|sp|Q3ZBR7.1|RM18_BOVIN (RecName: Full=39S ribosomal protein L18, mitochondrial; Short=L18mt; Short=MRP-L18; Flags: Precursor)

HSP 1 Score: 102.064 bits (253), Expect = 4.613e-26
Identity = 54/150 (36.00%), Postives = 84/150 (56.00%), Query Frame = 0
Query:   35 PYIDESEKPLGPNDELIQTHVRNRNPRNLEMMRIGYKPNGFQWERKSREYWNKLDLQITNQHTKAEVAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQRCLQAGISHVFLQIEKDDLQKERMTRFVNAIKEQGITIGEGKK 184
            P +     P+G  +E +     NRNPRNLE++ +  K  G+     SRE+W++L +  +  H +A V H  G  V  AST EWAI+K LY+T   VA E++ +V+AQRCL+AGI+ +  Q    +   + M R    + E G+ + E ++
Sbjct:   30 PVVKPEADPVG--NEAVAPEFTNRNPRNLELLAVARKERGWGTVWPSREFWHRLRVIRSQHHIEALVEHRNGQVVVSASTREWAIKKHLYSTKSVVACESVGRVLAQRCLEAGINFMVYQPTPWEAASDSMKRLQIGMIEGGVVLQEPRR 177          
BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Match: gi|465842|sp|P34378.1|RM18_CAEEL (RecName: Full=39S ribosomal protein L18, mitochondrial)

HSP 1 Score: 77.7962 bits (190), Expect = 6.917e-17
Identity = 47/128 (36.72%), Postives = 70/128 (54.69%), Query Frame = 0
Query:   57 NRNPRNLEMMRIGYKPNGFQWE--RKSREYWNKLDLQITNQHTKAEVAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQRCLQAGISHVFLQIEKDDLQK-ERMTRFVNAIKEQGITIGE 181
            NRNPRN E+M       G+Q+E  R +R Y  K++L     H +  + H+    V  AST E +I   LY+ TD  A   I +V+A RCLQ+GI        K+ ++K +  T F  A++E+G+T+ E
Sbjct:   11 NRNPRNNELMGRQAPNTGYQFEKDRAARSYIYKVELVEGKSHREGRLVHYQDGVVISASTKEPSIASQLYSKTDTSAALNIGRVLALRCLQSGIHFAMPGATKEAIEKSQHQTHFFKALEEEGLTLKE 138          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1061487240|gb|ODN04316.1| (39S ribosomal protein L18, mitochondrial [Orchesella cincta])

HSP 1 Score: 136.732 bits (343), Expect = 2.202e-36
Identity = 66/193 (34.20%), Postives = 114/193 (59.07%), Query Frame = 0
Query:   21 GSGRSEVHTHLGPSPYID----ESEKPLGPNDELIQTHVRNRNPRNLEMMRIGYKPNGFQWERKSREYWNKLDLQITNQHTKAEVAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQRCLQAGISHVFLQIEKDDLQKERMTRFVNAIKEQGITIGEGKKYVQTEPHVRLNRFRKHSKPWEVLDD 209
             S  + + + +  SP+       S+     ND +I   + NRNP+NLE +RIG KP G+ +E++ +++WN++ L I+++H  A + H+ G     AS+ EW I+K+LY+T DA A + + +V+AQRCLQAGI+ V      D+ +KE+++ F+ AI++ G+ + E     Q  P   +N +     PW++ +D
Sbjct:   21 NSSIAGLDSSIAASPFAQCRFFSSKNEFPSNDSIIPKFINNRNPKNLEKLRIGEKPKGWCFEKEDKKFWNRVTLDISSRHISASIIHYLGQSPVMASSKEWCIKKYLYSTNDACAAKLVGQVLAQRCLQAGITEVACFFTPDERKKEKVSLFIKAIEDFGVGLMEPP---QILPDWNVNHWEIPETPWDIHED 210          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1228360410|ref|XP_021957034.1| (39S ribosomal protein L18, mitochondrial-like [Folsomia candida] >gi|1215276065|gb|OXA62374.1| hypothetical protein Fcan01_03511 [Folsomia candida])

HSP 1 Score: 136.346 bits (342), Expect = 3.472e-36
Identity = 70/169 (41.42%), Postives = 104/169 (61.54%), Query Frame = 0
Query:   41 EKPLGPNDELIQTHVRNRNPRNLEMMRIGYKPNGFQWERKSREYWNKLDLQITNQHTKAEVAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQRCLQAGISHVFLQIEKDDLQKERMTRFVNAIKEQGITIGEGKKYVQTEPHVRLNRFRKHSKPWEVLDD 209
            +K   PN+ LI   V NRNPRNLE +RI  K +G+  E++ R YWNKL +++T +H  A+V H  G     AST EW I+KFLYNT D+V+ + I +V+A RCLQ GI+ +   + ++D +KE+++  + A+++ G+T+ E     Q E    LN      K WEV +D
Sbjct:   49 KKEFPPNNTLIMDKVSNRNPRNLEKLRIAEKISGWDLEKEGRSYWNKLTIELTGRHITAKVVHVLGQIPVSASTNEWCIKKFLYNTRDSVSAKTIGQVLAHRCLQVGITELSCYLSEEDRKKEKISLIIGALEDGGVTLEEPG---QIEIPWSLNYPTMPEKSWEVHED 214          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1132377466|ref|XP_019844489.1| (PREDICTED: 39S ribosomal protein L18, mitochondrial [Bactrocera dorsalis])

HSP 1 Score: 129.798 bits (325), Expect = 2.810e-34
Identity = 62/153 (40.52%), Postives = 99/153 (64.71%), Query Frame = 0
Query:   57 NRNPRNLEMMRIGYKPNGFQWERKSREYWNKLDLQITNQHTKAEVAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQRCLQAGISHVFLQIEKDDLQKERMTRFVNAIKEQGITIGEGKKYVQTEPHVRLNRFRKHSKPWEVLDD 209
            NRNPRNLE +RI +KPNG+  E+  R +W+KL+L ++ ++  AEV H+    +  AST+EWAI+K LY TTD  A   +A+V+A RCLQ+GI+ +   +  D +   ++ +F+  ++E G+ + E ++YV   P   +    +H KPW+VL+D
Sbjct:   31 NRNPRNLERLRIAHKPNGYFLEKPGRSFWHKLELTVSGRYVTAEVRHFQNGPIVGASTSEWAIKKHLYKTTDTPAFVNLARVLAMRCLQSGITEMACNV--DAVAGGKVEKFLKTLEENGVKLQEPERYVAPLPWDAV----RHEKPWDVLED 177          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1048047592|ref|XP_017478809.1| (PREDICTED: 39S ribosomal protein L18, mitochondrial [Rhagoletis zephyria])

HSP 1 Score: 129.413 bits (324), Expect = 4.038e-34
Identity = 68/173 (39.31%), Postives = 106/173 (61.27%), Query Frame = 0
Query:   37 IDESEKPLGPNDELIQTHVRNRNPRNLEMMRIGYKPNGFQWERKSREYWNKLDLQITNQHTKAEVAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQRCLQAGISHVFLQIEKDDLQKERMTRFVNAIKEQGITIGEGKKYVQTEPHVRLNRFRKHSKPWEVLDD 209
            I E  KP G      +  V NRNPRNLE +RI +KPNG+  E+  R +W+KL+L I+ ++  AEV H+    +  AST+EWAI+K LY T+D  A   +A+V+A RCLQ+GI+ +   I  + +   ++ +F+  ++E G+ + E +++V   P   +    +H KPWEVL+D
Sbjct:   17 IKEISKPTG------EPVVINRNPRNLERLRIAHKPNGYFLEKPGRSFWHKLELSISGRYVTAEVRHFENGPIIGASTSEWAIKKHLYKTSDTPAFVNLARVLAMRCLQSGITEMACNI--NAVAGGKVDKFLKTLEENGVKLQEPERFVAPLPWDAV----RHEKPWEVLED 177          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|929371356|ref|XP_014095591.1| (PREDICTED: 39S ribosomal protein L18, mitochondrial [Bactrocera oleae])

HSP 1 Score: 129.028 bits (323), Expect = 5.607e-34
Identity = 63/153 (41.18%), Postives = 98/153 (64.05%), Query Frame = 0
Query:   57 NRNPRNLEMMRIGYKPNGFQWERKSREYWNKLDLQITNQHTKAEVAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQRCLQAGISHVFLQIEKDDLQKERMTRFVNAIKEQGITIGEGKKYVQTEPHVRLNRFRKHSKPWEVLDD 209
            NRNPRNLE +RI +KPNG+  E+  R +W+KL+L ++ ++  AEV H+    +  AST+EWAI+K LY TTD  A   +A+V+A RCLQ+GI+ +   I  D +   ++ +F+  ++E G+ + E ++Y    P   +    +H KPWEVL+D
Sbjct:   31 NRNPRNLERLRIAHKPNGYFLEKPGRSFWHKLELTVSGRYVTAEVRHFQNGPIVGASTSEWAIKKHLYKTTDTPAFVNLARVLAMRCLQSGITEMACNI--DAVAGGKVDKFLKTLEENGVKLQEPERYDAPLPWDAV----RHEKPWEVLED 177          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1098645878|ref|XP_018788620.1| (PREDICTED: 39S ribosomal protein L18, mitochondrial [Bactrocera latifrons])

HSP 1 Score: 128.642 bits (322), Expect = 1.083e-33
Identity = 63/153 (41.18%), Postives = 97/153 (63.40%), Query Frame = 0
Query:   57 NRNPRNLEMMRIGYKPNGFQWERKSREYWNKLDLQITNQHTKAEVAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQRCLQAGISHVFLQIEKDDLQKERMTRFVNAIKEQGITIGEGKKYVQTEPHVRLNRFRKHSKPWEVLDD 209
            NRNPRNLE +RI +KPNG+  E+  R +W+KL+L ++ ++  AEV H+    +  AST+EWAI+K LY T D  A   +A+V+A RCLQ+GI  +   I  D +   ++ +F+  ++E G+ + E ++YV   P   +    +H KPWEVL+D
Sbjct:   31 NRNPRNLERLRIAHKPNGYFLEKPGRSFWHKLELTVSGRYVTAEVRHFQNGPIVGASTSEWAIKKHLYKTKDTPAFVNLARVLAMRCLQSGIVEMTCNI--DAVAGGKVEKFLKTLEENGVKLQEPERYVAPLPWDAV----RHEKPWEVLED 177          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1321308743|ref|XP_023296413.1| (39S ribosomal protein L18, mitochondrial [Lucilia cuprina])

HSP 1 Score: 127.487 bits (319), Expect = 1.896e-33
Identity = 59/158 (37.34%), Postives = 98/158 (62.03%), Query Frame = 0
Query:   53 THVRNRNPRNLEMMRIGYKPNGFQWERKSREYWNKLDLQITNQHTKAEVAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQRCLQAGISHVFLQIEKDDLQKERMTRFVNAIKEQGITIGEGKKYVQTEPHVRLNRFRKHSKPWEVLDDE 210
             ++ NRNPRNLE +RIGYKP+G+  E+  R +W+KL++ I+ ++  AEV H+    V  AST EWAI+K L+ T D  A   +A+V+A RC Q+GI+ +   IE   +   ++ +F+  ++E G+ + E  +Y+  +P        +  KPWE+L+++
Sbjct:   28 VYMTNRNPRNLEKLRIGYKPDGYHLEKPGRSFWHKLEVNISGRYVSAEVKHFENGPVISASTAEWAIKKQLFKTKDTAAFVNLARVLANRCQQSGITEMLCTIEA--VPGGKLHKFLKTVEENGVVLKEAPRYIHPKPW----DAERPEKPWEILEED 179          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|1325333197|ref|XP_023348450.1| (39S ribosomal protein L18, mitochondrial-like [Eurytemora affinis])

HSP 1 Score: 125.561 bits (314), Expect = 2.283e-33
Identity = 59/96 (61.46%), Postives = 71/96 (73.96%), Query Frame = 0
Query:   47 NDELIQTHVRNRNPRNLEMMRIGYKPNGFQWERKSREYWNKLDLQITNQHTKAEVAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQR 142
            N+++I   VRNRNP NLEMM IG KP GFQ +   R+YWN L LQI+NQHT AEV HWTG  V  AST EW IRK LYN TD+ A++ +AK+I+QR
Sbjct:   38 NNDIIAPRVRNRNPMNLEMMCIGRKPEGFQLDSAPRKYWNGLTLQISNQHTTAEVRHWTGRVVAKASTREWPIRKQLYNLTDSAAVQTVAKIISQR 133          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|751469761|ref|XP_011190081.1| (PREDICTED: 39S ribosomal protein L18, mitochondrial [Zeugodacus cucurbitae])

HSP 1 Score: 127.487 bits (319), Expect = 2.540e-33
Identity = 62/154 (40.26%), Postives = 99/154 (64.29%), Query Frame = 0
Query:   57 NRNPRNLEMMRIGYKPNGFQWERKSREYWNKLDLQITNQHTKAEVAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQRCLQAGISHVFLQIEKDDLQKERMTRFVNAIKEQGITIGEGKKYVQTEPHVRLNRFRKHSKPWEVLDDE 210
            NRNPRNLE +RI +KP G+  E+  R +W+KL+L ++ ++  AEV H+    +  AST+EWAI+K LY TTD  A   +A+V+A RCLQ+GI+ +   I  D +   ++ +F+  ++E G+ + E ++YV   P   +    ++ KPWEVL+D+
Sbjct:   31 NRNPRNLERLRIAHKPKGYFLEKPGRSFWHKLELTVSGRYVTAEVRHFQNGPIVGASTSEWAIKKHLYKTTDTPAFVNLARVLAMRCLQSGITEMACNI--DAVAGGKVEKFLKTLEENGVRLQEPERYVAPLPWDAV----RNEKPWEVLEDQ 178          
BLAST of 39s ribosomal protein mitochondrial vs. nr
Match: gi|939632330|ref|XP_014284559.1| (PREDICTED: 39S ribosomal protein L18, mitochondrial isoform X2 [Halyomorpha halys])

HSP 1 Score: 124.79 bits (312), Expect = 1.310e-32
Identity = 58/160 (36.25%), Postives = 96/160 (60.00%), Query Frame = 0
Query:   47 NDELIQTHVRNRNPRNLEMMRIGYKPNGFQWERKSREYWNKLDLQITNQHTKAEVAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQRCLQAGISHVFLQIEKDDLQKERMTRFVNAIKEQGITIGEGKKYVQTEPHVRLNRFRKHSKPWEV 206
            N   +  +V NRNPRNLE + IGYKP+G+  E+  R YW+K+ L++T ++  A V H++G     AST EWAI+K+LY+T D  A   + +++ +RCL+ GI+ ++  +      K  +  F+N + + GI++ E  +Y+  +P    +   +  KPWEV
Sbjct:   11 NYATVAGYVHNRNPRNLEKLTIGYKPDGWHLEKPGRSYWHKIILEVTGRNVTASVQHFSGTVPVTASTKEWAIKKYLYSTLDKAAYTNLGRILGRRCLETGITEMYCDLASPKGGKVEL--FLNELVKSGISLTEAPRYIHPKP----SDLERPEKPWEV 164          
The following BLAST results are available for this feature:
BLAST of 39s ribosomal protein mitochondrial vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1
Match NameE-valueIdentityDescription
EMLSAG000000115693.352e-5148.43supercontig:LSalAtl2s:LSalAtl2s800:159706:160242:-... [more]
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BLAST of 39s ribosomal protein mitochondrial vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
gi|41017797|sp|Q9H0U6.1|RM18_HUMAN1.321e-2739.42RecName: Full=39S ribosomal protein L18, mitochond... [more]
gi|41017793|sp|Q9CQL5.1|RM18_MOUSE3.578e-2734.68RecName: Full=39S ribosomal protein L18, mitochond... [more]
gi|115502821|sp|Q3ZBR7.1|RM18_BOVIN4.613e-2636.00RecName: Full=39S ribosomal protein L18, mitochond... [more]
gi|465842|sp|P34378.1|RM18_CAEEL6.917e-1736.72RecName: Full=39S ribosomal protein L18, mitochond... [more]
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BLAST of 39s ribosomal protein mitochondrial vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25
Match NameE-valueIdentityDescription
gi|1061487240|gb|ODN04316.1|2.202e-3634.2039S ribosomal protein L18, mitochondrial [Orchesel... [more]
gi|1228360410|ref|XP_021957034.1|3.472e-3641.4239S ribosomal protein L18, mitochondrial-like [Fol... [more]
gi|1132377466|ref|XP_019844489.1|2.810e-3440.52PREDICTED: 39S ribosomal protein L18, mitochondria... [more]
gi|1048047592|ref|XP_017478809.1|4.038e-3439.31PREDICTED: 39S ribosomal protein L18, mitochondria... [more]
gi|929371356|ref|XP_014095591.1|5.607e-3441.18PREDICTED: 39S ribosomal protein L18, mitochondria... [more]
gi|1098645878|ref|XP_018788620.1|1.083e-3341.18PREDICTED: 39S ribosomal protein L18, mitochondria... [more]
gi|1321308743|ref|XP_023296413.1|1.896e-3337.3439S ribosomal protein L18, mitochondrial [Lucilia ... [more]
gi|1325333197|ref|XP_023348450.1|2.283e-3361.4639S ribosomal protein L18, mitochondrial-like [Eur... [more]
gi|751469761|ref|XP_011190081.1|2.540e-3340.26PREDICTED: 39S ribosomal protein L18, mitochondria... [more]
gi|939632330|ref|XP_014284559.1|1.310e-3236.25PREDICTED: 39S ribosomal protein L18, mitochondria... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold15_size728074supercontigscaffold15_size728074:3390..4762 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt2018-04-19
T. kingsejongensis proteins Blastp vs. NR2018-05-15
Properties
Property NameValue
Note-
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1Tigriopus kingsejongensismRNA


Sequences
The following sequences are available for this feature:

gene from alignment at scaffold15_size728074:3390..4762+

Legend: mRNA
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold15_size728074-processed-gene-0.1 ID=snap_masked-scaffold15_size728074-processed-gene-0.1|Name=39s ribosomal protein mitochondrial|organism=Tigriopus kingsejongensis|type=gene|length=1373bp|location=Sequence derived from alignment at scaffold15_size728074:3390..4762+ (Tigriopus kingsejongensis)
GTTTGTGGAGGATCTTGGCCCCATTTCCCCAATCCCCAGCATGTTCGCCG TCGGACCCGTTCGGGCGTGTCCCCGCCTGTTGACCCGAGGTATGGCCCTT GGGAGTGGTCGATCAGAGGTCCACACCCACCTGGGCCCCTCCCCTTACAT TGATGAGTCGGAGAAGCCTTTGGGTGAGATGAGTTTATGGTTCCACCAGG CGTGGGACGAGGTGTTAATCTGAGTGGGCGCAGTACTTATCCCCCAATCT TGCTCCAGGACCCAACGACGAACTGATCCAGACCCACGTGAGGAATCGCA ATCCTCGGAACCTGGAGATGATGCGCATCGGGTACAAGCCGAATGGCTTC CAATGGGAGAGAAAATCGCGCGAATACTGGAACAAACTGGATCTTCAGAT CACCAACCAGCACACCAAAGCCGAGGTGGCTCACTGGACGGGCTTGAGAG TGTGCCACGCATCCACCACGGAATGGGCCATACGGAAATTCTTGTACAAC ACCACCGATGCCGTCGCCCTGGAGGCCATTGCCAAGGTGAGCAGTCAAAC CAATGTCCTTGATTCAAACCGCCAAATACTGGCCCAGCTCTTCATGCCAT CGATGACCATGCAGAGCTCTATCGCCCTGTGAAACTCGCTCGATCACGGC CAAGTCACCCAGAATGGAATCAAAGGCCTCGATAACACTCTGACCTGAGT GAACCTTGTTAGCAACTCGCCGTTTCCTGGCGTGAGCCAAGGTTTGAATT TGTACCCATTGCGTCTTATACATTTCGTCCTCATGTTGTGTTACTAGAAG CAAATTCTTTCGCTTATTACAACTGCTTACATGCACCTGAACACATATAC ATCTCTGACCGGTTCAAAGTCGCTTGGACCATTTTTTAACCGATATTCAA AAGCAGCCCCGTGCTCAAATTGGTCTTTTGGCTGCCATTTTTTATAATGG TTTGGCTGAAGCCAGATCAACATCTCTTCACGGGATATGGTCAGCACCTT CGGTTTTATTAAAAAAAACCTGTCCAAGGGCGCCATGAATGCATGTCTTT TTTTTGGGGGGGGAGGGTCCGAGCTATTTCTAATCGTTCTCATTGCCATA TATTGTAGGTGATTGCCCAGCGATGTCTCCAGGCCGGGATTAGTCATGTG TTCCTCCAAATCGAGAAGGATGACCTGCAGAAGGAACGCATGACCCGATT TGTGAATGCCATCAAAGAGCAAGGCATCACCATTGGAGAGGGGAAAAAGT ACGTTCAAACCGAGCCCCACGTGAGGCTCAACCGATTTAGGAAACACTCC AAGCCTTGGGAAGTGTTGGATGACGAGTAATTTGGGTTGCCTTGTGCTAA ATGTAATAAAATATTCACTTTGC
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Synonyms
The feature '39s ribosomal protein mitochondrial' has the following synonyms
Synonym
Tk08837
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