snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1, snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1 (mRNA) Tigriopus kingsejongensis

Overview
Namesnap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1
Unique Namesnap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1
TypemRNA
OrganismTigriopus kingsejongensis (Tigriopus kingsejongensis)
Associated RNAi Experiments

Nothing found

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold15_size728074supercontigscaffold15_size728074:3390..4762 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
maker2018-02-12 .496401
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
39s ribosomal protein mitochondrialsnap_masked-scaffold15_size728074-processed-gene-0.1Tigriopus kingsejongensisgene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1:exon:1032snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1:exon:1032Tigriopus kingsejongensisexon
snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1:exon:1033snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1:exon:1033Tigriopus kingsejongensisexon
snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1:exon:1034snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1:exon:1034Tigriopus kingsejongensisexon
snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1:five_prime_utrsnap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1:five_prime_utrTigriopus kingsejongensisexon
snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1:cdsTigriopus kingsejongensisexon
snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1:cdssnap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1:cds-1953457Tigriopus kingsejongensisexon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
polypeptide-auto1953458auto1953458Tigriopus kingsejongensispolypeptide
Tk08837Tk08837Tigriopus kingsejongensispolypeptide


Sequences
The following sequences are available for this feature:

protein sequence of Tk08837

>Tk08837 ID=Tk08837|Name=Tk08837|organism=Tigriopus kingsejongensis|type=polypeptide|length=210bp
MFAVGPVRACPRLLTRGMALGSGRSEVHTHLGPSPYIDESEKPLGPNDEL
IQTHVRNRNPRNLEMMRIGYKPNGFQWERKSREYWNKLDLQITNQHTKAE
VAHWTGLRVCHASTTEWAIRKFLYNTTDAVALEAIAKVIAQRCLQAGISH
VFLQIEKDDLQKERMTRFVNAIKEQGITIGEGKKYVQTEPHVRLNRFRKH
SKPWEVLDDE
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mRNA from alignment at scaffold15_size728074:3390..4762+

Legend: exonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1 ID=snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1|Name=snap_masked-scaffold15_size728074-processed-gene-0.1-mRNA-1|organism=Tigriopus kingsejongensis|type=mRNA|length=1373bp|location=Sequence derived from alignment at scaffold15_size728074:3390..4762+ (Tigriopus kingsejongensis)
GTTTGTGGAGGATCTTGGCCCCATTTCCCCAATCCCCAGCATGTTCGCCG
TCGGACCCGTTCGGGCGTGTCCCCGCCTGTTGACCCGAGGTATGGCCCTT
GGGAGTGGTCGATCAGAGGTCCACACCCACCTGGGCCCCTCCCCTTACAT
TGATGAGTCGGAGAAGCCTTTGGGTGAGATGAGTTTATGGTTCCACCAGG
CGTGGGACGAGGTGTTAATCTGAGTGGGCGCAGTACTTATCCCCCAATCT
TGCTCCAGGACCCAACGACGAACTGATCCAGACCCACGTGAGGAATCGCA
ATCCTCGGAACCTGGAGATGATGCGCATCGGGTACAAGCCGAATGGCTTC
CAATGGGAGAGAAAATCGCGCGAATACTGGAACAAACTGGATCTTCAGAT
CACCAACCAGCACACCAAAGCCGAGGTGGCTCACTGGACGGGCTTGAGAG
TGTGCCACGCATCCACCACGGAATGGGCCATACGGAAATTCTTGTACAAC
ACCACCGATGCCGTCGCCCTGGAGGCCATTGCCAAGGTGAGCAGTCAAAC
CAATGTCCTTGATTCAAACCGCCAAATACTGGCCCAGCTCTTCATGCCAT
CGATGACCATGCAGAGCTCTATCGCCCTGTGAAACTCGCTCGATCACGGC
CAAGTCACCCAGAATGGAATCAAAGGCCTCGATAACACTCTGACCTGAGT
GAACCTTGTTAGCAACTCGCCGTTTCCTGGCGTGAGCCAAGGTTTGAATT
TGTACCCATTGCGTCTTATACATTTCGTCCTCATGTTGTGTTACTAGAAG
CAAATTCTTTCGCTTATTACAACTGCTTACATGCACCTGAACACATATAC
ATCTCTGACCGGTTCAAAGTCGCTTGGACCATTTTTTAACCGATATTCAA
AAGCAGCCCCGTGCTCAAATTGGTCTTTTGGCTGCCATTTTTTATAATGG
TTTGGCTGAAGCCAGATCAACATCTCTTCACGGGATATGGTCAGCACCTT
CGGTTTTATTAAAAAAAACCTGTCCAAGGGCGCCATGAATGCATGTCTTT
TTTTTGGGGGGGGAGGGTCCGAGCTATTTCTAATCGTTCTCATTGCCATA
TATTGTAGGTGATTGCCCAGCGATGTCTCCAGGCCGGGATTAGTCATGTG
TTCCTCCAAATCGAGAAGGATGACCTGCAGAAGGAACGCATGACCCGATT
TGTGAATGCCATCAAAGAGCAAGGCATCACCATTGGAGAGGGGAAAAAGT
ACGTTCAAACCGAGCCCCACGTGAGGCTCAACCGATTTAGGAAACACTCC
AAGCCTTGGGAAGTGTTGGATGACGAGTAATTTGGGTTGCCTTGTGCTAA
ATGTAATAAAATATTCACTTTGC
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