probable ribosome biogenesis protein nep1, snap_masked-scaffold17_size721972-processed-gene-1.3 (gene) Tigriopus kingsejongensis

Overview


Name	probable ribosome biogenesis protein nep1
Unique Name	snap_masked-scaffold17_size721972-processed-gene-1.3
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of probable ribosome biogenesis protein nep1 vs. L. salmonis genes
Match: EMLSAG00000000678 (supercontig:LSalAtl2s:LSalAtl2s1107:261868:262668:-1 gene:EMLSAG00000000678 transcript:EMLSAT00000000678 description:"maker-LSalAtl2s1107-augustus-gene-1.40")

HSP 1 Score: 287.73 bits (735), Expect = 9.896e-99
Identity = 153/261 (58.62%), Postives = 188/261 (72.03%), Query Frame = 0

Query:    1 MGKNRRKREQSESAAAETAAKKAKPATPADDDGVDPSRLERVNGASRPTAADQRLIVVLAGAHLETVKSGR-GFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADS-SVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259
            MGK   KR+     A E AAKK K  TP D    + SRL         +  + RLIV+L  AHLE +KS +  F LLN D+H+G +RK  R  +  RPDITHQCLLMLLDSPLNRAG LQV+I TA+NVLIE+NPQTRIPRTF RF+GLMVQLLHK+S++A+DS  +KLLKVIKNPI+DHLP G  K+ MS+S+     P +++  P +  P+C+V+GAIAKGAI  DYTD+   +G+YPLSAALTC K+TSAFE AWGVF
Sbjct:    1 MGK---KRKLEREEAEEAAAKKQK--TPLDSGIKEVSRLA--------SKKEGRLIVILYAAHLEIIKSDKKSFDLLNSDQHTGFIRKTGRQLTDCRPDITHQCLLMLLDSPLNRAGLLQVYIQTAKNVLIEINPQTRIPRTFKRFSGLMVQLLHKFSVRASDSGGLKLLKVIKNPITDHLPPGIRKICMSFSSKEVVKPADII--PKNPEPICVVIGAIAKGAINPDYTDQDLRIGNYPLSAALTCTKITSAFEEAWGVF 246

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BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|32699982|sp|Q9W4J5.2|NEP1_DROME (RecName: Full=Ribosomal RNA small subunit methyltransferase NEP1; AltName: Full=18S rRNA (pseudouridine-N1)-methyltransferase; AltName: Full=Ribosome biogenesis protein NEP1)

HSP 1 Score: 270.396 bits (690), Expect = 2.698e-90
Identity = 131/215 (60.93%), Postives = 157/215 (73.02%), Query Frame = 0

Query:   49 TAADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDS-----HVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258
             A ++RLI+VL GA LETVK    F LLN D+H+GI+RK  RD  S RPDITHQCLLML DSPLNRAG LQVF+ T  NVLIE+NPQTRIPRTF RFAGLMVQLLHK+ I+A DSS +L+ VIKNPI+DH+PVGC K  MS+S        +LVP  D        PV +V+GA A G ++TDYT+E   + +YPLSAA+ C+K+ SAFE  WGV
Sbjct:   37 NATEKRLIIVLEGAQLETVKVHNTFELLNCDDHAGIMRKNQRDPGSCRPDITHQCLLMLFDSPLNRAGLLQVFVRTEHNVLIEINPQTRIPRTFKRFAGLMVQLLHKFQIRANDSSRRLMSVIKNPITDHVPVGCKKYAMSFSGKLLPNCRDLVPHGDETSASYDEPVVIVIGAFAHGVLKTDYTEELFSISNYPLSAAIACSKICSAFEEVWGV 251

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BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|20532172|sp|Q92979.4|NEP1_HUMAN (RecName: Full=Ribosomal RNA small subunit methyltransferase NEP1; AltName: Full=18S rRNA (pseudouridine(1248)-N1)-methyltransferase; AltName: Full=18S rRNA Psi1248 methyltransferase; AltName: Full=Nucleolar protein EMG1 homolog; AltName: Full=Protein C2f; AltName: Full=Ribosome biogenesis protein NEP1)

HSP 1 Score: 269.24 bits (687), Expect = 4.845e-90
Identity = 139/230 (60.43%), Postives = 162/230 (70.43%), Query Frame = 0

Query:   30 DDDGVDPSRLERVNGASRPTAADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259
            D D + P R  R+   ++     +RLIVVL GA LETVK G+ + LLN D+H  IL K  RD   ARPDITHQ LLML+DSPLNRAG LQV+IHT +NVLIEVNPQTRIPRTF RF GLMVQLLHK S++AAD   KLLKVIKNP+SDH PVGC KV  S+S        ELVP  D   P+  VVGA A G +  +YT++   + +YPLSAALTCAKLT+AFE  WGV 
Sbjct:   21 DWDALPPKR-PRLGAGNK--IGGRRLIVVLEGASLETVKVGKTYELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSSD---PIVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWGVI 244

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BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|20532163|sp|O35130.1|NEP1_MOUSE (RecName: Full=Ribosomal RNA small subunit methyltransferase NEP1; AltName: Full=18S rRNA (pseudouridine(1248)-N1)-methyltransferase; AltName: Full=18S rRNA Psi1248 methyltransferase; AltName: Full=Nucleolar protein EMG1 homolog; AltName: Full=Protein C2f; AltName: Full=Ribosome biogenesis protein NEP1)

HSP 1 Score: 266.159 bits (679), Expect = 9.439e-89
Identity = 136/230 (59.13%), Postives = 160/230 (69.57%), Query Frame = 0

Query:   30 DDDGVDPSRLERVNGASRPTAADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259
            D +   P +L R+   S+     +RLIVVL GA LETVK G+ + LLN D H  +L K  RD    RPDITHQ LLML+DSPLNRAG LQV+IHT +NVLIEVNPQTRIPRTF RF GLMVQLLHK S++AAD   KLLKVIKNP+SDH PVGC K+  S+S        ELVP  D   PV  VVGA A G +  +YT++   + +YPLSAALTCAK+T+AFE  WGV 
Sbjct:   21 DWETTPPKKL-RLGAGSK--CGGRRLIVVLEGASLETVKVGKTYELLNCDRHKSMLLKNGRDPGEVRPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKIGTSFSVEDISDIRELVPSSD---PVVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKVTTAFEEVWGVI 244

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BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|20532185|sp|Q9XX15.1|NEP1_CAEEL (RecName: Full=Ribosomal RNA small subunit methyltransferase nep-1; AltName: Full=18S rRNA (pseudouridine-N1)-methyltransferase; AltName: Full=Ribosome biogenesis protein nep-1)

HSP 1 Score: 237.654 bits (605), Expect = 1.112e-77
Identity = 112/205 (54.63%), Postives = 148/205 (72.20%), Query Frame = 0

Query:   55 LIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259
            L VVL G  LET K G  + +L+ D+H+  LRK  +D +  RPDI HQCLL LLDSPLNRAG+L+VF  T++NVL++V+PQ RIPRTF RF GLMVQLLHK SI+AA+++ KL+ V+KNP+S+HLPVG  K+LMS++        +LV  P++  P+ L++G IA+G I  DY D    + +YPLSAALTCAK+TS  E  WG+ 
Sbjct:   28 LYVVLEGCSLETAKVGGEYAILSSDKHANFLRKQKKDPADYRPDILHQCLLNLLDSPLNRAGKLRVFFRTSKNVLVDVSPQCRIPRTFDRFCGLMVQLLHKLSIRAAETTQKLMSVVKNPVSNHLPVGSRKMLMSFNVPELTMANKLV-APETDEPLVLIIGGIARGKIVVDYNDSETKISNYPLSAALTCAKVTSGLEEIWGII 231

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BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|20532182|sp|Q9P8P7.1|NEP1_CANAX (RecName: Full=Ribosomal RNA small subunit methyltransferase NEP1; AltName: Full=18S rRNA (pseudouridine-N1)-methyltransferase)

HSP 1 Score: 233.032 bits (593), Expect = 2.267e-75
Identity = 117/215 (54.42%), Postives = 146/215 (67.91%), Query Frame = 0

Query:   53 QRLIVVLAGAHLETVKSGRG------FGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGA--IQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259
            QRLIVVL+ A LET K   G      F LLN D+H G+LRK  RD + ARPDITHQCLL LLDSP+N+AGRLQV+I TA+ VLIEVNP  RIPRTF RF+GLMVQLLHK SI++ +S   LLKVIKNPI+DHLP  C KV +S+ A      ++ V   D +  +C+ VGA+A+G      ++ DE   L  YPLSA++ C+K     E  WG++
Sbjct:   54 QRLIVVLSQACLETYKMNSGGPGGDRFALLNCDDHQGLLRKMGRDIAEARPDITHQCLLTLLDSPINKAGRLQVYIQTARGVLIEVNPSVRIPRTFKRFSGLMVQLLHKLSIRSENSKEVLLKVIKNPITDHLPTKCRKVTLSFDAELK-RVQDYVTTLDENESICVFVGAMARGKDNFADEFVDEKIGLSDYPLSASVACSKFCHGCEDVWGIY 267

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BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|20532165|sp|Q06287.1|NEP1_YEAST (RecName: Full=Ribosomal RNA small subunit methyltransferase NEP1; AltName: Full=18S rRNA (pseudouridine(1189)-N1)-methyltransferase; Short=18S rRNA Psi1189 methyltransferase; AltName: Full=Essential for mitotic growth protein 1; AltName: Full=Nucleolar essential protein 1)

HSP 1 Score: 228.024 bits (580), Expect = 1.072e-73
Identity = 113/215 (52.56%), Postives = 146/215 (67.91%), Query Frame = 0

Query:   53 QRLIVVLAGAHLETVK------SGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGA--IQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259
            +R+IVVLA A LET K       G  + LLN D+H G+L+K  RD S ARPDITHQCLL LLDSP+N+AG+LQV+I T++ +LIEVNP  RIPRTF RF+GLMVQLLHK SI++ +S  KLLKVIKNPI+DHLP  C KV +S+ A      ++ +   D    +C+ VGA+A+G      +Y DE   L +YPLSA++ C+K     E AW + 
Sbjct:   39 KRMIVVLAMASLETHKISSNGPGGDKYVLLNCDDHQGLLKKMGRDISEARPDITHQCLLTLLDSPINKAGKLQVYIQTSRGILIEVNPTVRIPRTFKRFSGLMVQLLHKLSIRSVNSEEKLLKVIKNPITDHLPTKCRKVTLSFDAP-VIRVQDYIEKLDDDESICVFVGAMARGKDNFADEYVDEKVGLSNYPLSASVACSKFCHGAEDAWNIL 252

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BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|6016598|sp|Q10107.2|NEP1_SCHPO (RecName: Full=Ribosomal RNA small subunit methyltransferase mra1; AltName: Full=18S rRNA (pseudouridine-N1)-methyltransferase; AltName: Full=Multicopy suppressor of ras1-deficiency protein)

HSP 1 Score: 224.557 bits (571), Expect = 7.832e-71
Identity = 112/212 (52.83%), Postives = 144/212 (67.92%), Query Frame = 0

Query:   53 QRLIVVLAGAHLETVKSGRG----FGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGA--IQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258
            QRLIVVL  A LE  K G+     + LLN D+H GIL+K NR+ + ARPDITHQCLL LLDSPLN+AGRLQV+IHTA+ VLIEVNP  RIPRTF RF+GLMVQLLHK SI++ + + KLLKVIKNP++D+LP  C K  +S+ A  T  P + +     +  VC+ +GA+A G       + DE   +  YPLSA++ C+K   + E   G+
Sbjct:  148 QRLIVVLDQACLEIYKVGKAKDAKYQLLNCDDHQGILKKLNRNIAQARPDITHQCLLTLLDSPLNKAGRLQVYIHTAKKVLIEVNPSVRIPRTFKRFSGLMVQLLHKLSIRSVNGNEKLLKVIKNPVTDYLPPNCRKATLSFDAP-TVPPRKYLETLQPNQSVCIAIGAMAHGPDDFSDGWVDEKISISDYPLSASIACSKFLHSMEDFLGI 358

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BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|20532174|sp|Q96UP2.1|NEP1_CANGA (RecName: Full=Ribosomal RNA small subunit methyltransferase NEP1; AltName: Full=18S rRNA (pseudouridine-N1)-methyltransferase [[Candida] glabrata CBS 138])

HSP 1 Score: 213.386 bits (542), Expect = 3.178e-68
Identity = 112/221 (50.68%), Postives = 145/221 (65.61%), Query Frame = 0

Query:   43 NGASRPTAADQRLIVVLAGAHLETVKSG-RGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSS-VKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKG--AIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259
            N +S     + RL VVL  A LET  S      LLN D+H GILRK  RD + ARPDITHQCLL LLDSP+N+AG LQV+I T +NVLIEVNP  RIPRTF RF+GLMVQLLHK SI++ +SS   LL+V+KNP++ +LP  C KV +S+ A     P+E +    S   VC+ VGA+A+G  +   +Y D+   + +YPLSA++ C+K     E AW + 
Sbjct:   13 NNSSVTKKQEPRLYVVLCEASLETYTSNDHRTSLLNCDDHQGILRKMGRDIAEARPDITHQCLLTLLDSPINKAGLLQVYILTKKNVLIEVNPSVRIPRTFKRFSGLMVQLLHKLSIRSMESSNTHLLRVVKNPVTKYLPADCRKVTLSFDA-EVMRPQEYLGDKQS---VCVFVGAMARGHDSFADEYVDDKIAISNYPLSASVACSKFCHGAEDAWAII 229

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BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|73921208|sp|Q5JI44.1|NEP1_THEKO (RecName: Full=Ribosomal RNA small subunit methyltransferase Nep1; AltName: Full=16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)

HSP 1 Score: 83.5741 bits (205), Expect = 3.234e-18
Identity = 54/186 (29.03%), Postives = 83/186 (44.62%), Query Frame = 0

Query:   74 GLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLP-VGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258
             +L+   H   L+K        RPDI H CLL  L+S  N+ G L+V++HT  + +I + P+TR+PR + RF GLM  L  K    A    ++LL++ K P+   +  +    V + +       P        SH    +VVG    G            L   PL A    +++   FE+A G+
Sbjct:   38 AILDSTYHHAALKKLPDGDRRGRPDIVHICLLNALESIANKEGFLRVYVHTRNDEVIHIKPETRLPRNYNRFLGLMESLFKK---GAVPEGLELLRIEKKPLESLIEDINPDTVFIMHEEGELIRPRSFGEILASHQNPVVVVGGFPHGDFMRPIEGTKVSLYREPLMAWTVVSEVIVNFEAALGL 220

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BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|20532164|sp|O50087.1|NEP1_PYRHO (RecName: Full=Ribosomal RNA small subunit methyltransferase Nep1; AltName: Full=16S rRNA (pseudouridine-N1-)-methyltransferase Nep1)

HSP 1 Score: 82.8037 bits (203), Expect = 8.171e-18
Identity = 61/224 (27.23%), Postives = 98/224 (43.75%), Query Frame = 0

Query:   53 QRLIVVLAGAHLETV-----------------KSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHL-PVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258
            +RL +++A A LETV                 K      +L+   H   LR+        RPDI H CLL  LDS LN+  RL+V++HT  + +I + P+TR+PR + RF GLM  L  K    A    ++LL++ K  +++ +  +    V + +       P+      D      ++VG    G  ++        L   PL A     ++  ++E  W V
Sbjct:    5 KRLHLIIADAELETVPPEILDHPAIVNYAKRRKKRPEKIILDSTYHHAALRQLEDGERRGRPDIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLMENLFEK---GAVPEDLELLRMEKKTLNELIEEINPDVVFIMHEEGELMIPKNFGKLLDKFKKPTVIVGGFPHGDFKSKVDGVKISLYREPLMAWTIVNEVIVSYE--WEV 223

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BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|1069680266|ref|XP_018301791.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Trachymyrmex zeteki] >gi|1012982836|gb|KYQ56596.1| putative ribosome biogenesis protein NEP1 [Trachymyrmex zeteki])

HSP 1 Score: 288.115 bits (736), Expect = 4.755e-95
Identity = 129/207 (62.32%), Postives = 167/207 (80.68%), Query Frame = 0

Query:   52 DQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258
            ++RLIV+L  + LE+VK G  F LLN D+H+ IL+KY RD  + RPDITHQCLLML+DSPLNRAG LQV+IHT +NVLIE+NPQTRIPRTF RFAGLMVQLLHKY ++A+D  +KLLKVIKNPI++HLPVGC K+LMS++A++   P ELVP  D   P+ +VVGA+A G ++TDYT+++  + +YPLS A+ C+KL +AFE  WG+
Sbjct:   31 EKRLIVILENSQLESVKVGNSFELLNCDDHTNILKKYKRDPGTCRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKYGVRASDGPMKLLKVIKNPITNHLPVGCRKILMSFNASKVLNPRELVPTED---PIAIVVGAMAHGQVKTDYTEDTYSISNYPLSGAIACSKLCTAFEEVWGI 234

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BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|1230020984|ref|XP_022176596.1| (ribosomal RNA small subunit methyltransferase NEP1 [Myzus persicae] >gi|1230021018|ref|XP_022176597.1| ribosomal RNA small subunit methyltransferase NEP1 [Myzus persicae] >gi|1230021081|ref|XP_022176598.1| ribosomal RNA small subunit methyltransferase NEP1 [Myzus persicae])

HSP 1 Score: 287.73 bits (735), Expect = 5.644e-95
Identity = 142/259 (54.83%), Postives = 177/259 (68.34%), Query Frame = 0

Query:    1 MGKNRRKREQSESAAAETAAKKAKPATPADDDGVDPSRLERVNGASRPTAADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259
            MGK RR+ ++         AK+ K     DD+                   ++RLIV+L  A LETVK G+ F LLN DEHS ILRK+ R+  + RPDI+HQCLLML DSPLNRAG LQV+IHT  NVLIE+NPQTRIPRTF RFAGLMVQLLHK+S++AA++S KL+KVIKNPI+DHLP GC KV  S+SA +   P ELVP      P+  VVGA+A G I+ DY +++  + +YPLSAALTC K+ SAFE +WG+ 
Sbjct:    1 MGKKRRRTDEDTEFDLTRKAKEVK-----DDN-------------------EKRLIVILENAQLETVKVGKSFELLNPDEHSHILRKHGREIGNCRPDISHQCLLMLFDSPLNRAGLLQVYIHTENNVLIEINPQTRIPRTFKRFAGLMVQLLHKFSVRAAETSAKLMKVIKNPITDHLPAGCRKVATSFSAEKPIKPSELVP---QDAPIAFVVGAMAHGQIKADYAEQTVAISNYPLSAALTCTKICSAFEDSWGIL 232

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BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|795058819|ref|XP_011872645.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Vollenhovia emeryi])

HSP 1 Score: 287.73 bits (735), Expect = 5.982e-95
Identity = 132/207 (63.77%), Postives = 165/207 (79.71%), Query Frame = 0

Query:   52 DQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258
            ++RLIVVL  A LE+VK G  F LLN D+H+ ILRK NRD  + RPDI HQCLLML+DSPLNRAG LQV+IHT +NVLIE+NPQTRIPRTF RFAGLMVQLLHKY ++A+D  +KLLKVIKNPI++HLPVGC K+LMS++A +   P ELVP  D   P+ +VVGA+A G ++TDYT+++  + +YPLS A+ C+KL +AFE  WGV
Sbjct:   31 EKRLIVVLENAQLESVKVGNSFELLNCDDHTNILRKNNRDPGTCRPDIAHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKYGVRASDGPMKLLKVIKNPITNHLPVGCRKILMSFNANKVLNPRELVPAED---PIAIVVGAMAHGQVKTDYTEDTYSISNYPLSGAVACSKLCTAFEEVWGV 234

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BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|746844618|ref|XP_011052573.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Acromyrmex echinatior] >gi|332026522|gb|EGI66643.1| Putative ribosome biogenesis protein NEP1 [Acromyrmex echinatior])

HSP 1 Score: 287.345 bits (734), Expect = 9.467e-95
Identity = 129/207 (62.32%), Postives = 167/207 (80.68%), Query Frame = 0

Query:   52 DQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258
            ++RLIV+L  + LE+VK G  F LLN D+H+ IL+KY RD  + RPDITHQCLLML+DSPLNRAG LQV+IHT +NVLIE+NPQTRIPRTF RFAGLMVQLLHKY ++A+D  +KLLKVIKNPI++HLPVGC K+LMS++A++   P +LVP  D   P+ +VVGA+A G ++TDYT+++  + +YPLS A+ C+KL +AFE  WGV
Sbjct:   31 EKRLIVILENSQLESVKVGNSFELLNCDDHTNILKKYKRDPGTCRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKYGVRASDGPMKLLKVIKNPITNHLPVGCRKILMSFNASKVLNPRDLVPTED---PIAVVVGAMAHGQVKTDYTEDTYSISNYPLSGAIACSKLCTAFEEVWGV 234

[Close]

BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|755944106|ref|XP_011299347.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Fopius arisanus])

HSP 1 Score: 286.574 bits (732), Expect = 1.637e-94
Identity = 139/240 (57.92%), Postives = 175/240 (72.92%), Query Frame = 0

Query:   20 AKKAKPATPADDDGVDPSRLERVNGASRPTAADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259
             KK       DD+  DP+   +    +     ++RLI++L GA LE+VK G  F LLN D+H GIL+K NRD  S RPDI HQCLLMLLDSPLNRAG LQV+IHT +NVLIEVNPQTRIPRTF RFAGLMVQLLHK+S++A+D  +KLLKVIKNP++DHLPVGC K+ MS+S+     P ELVP  +   P+ +VVGA+A G ++TDYT+++  + +YPLS ALTC+KL SAFE  W + 
Sbjct:    2 GKKRNREANKDDNEYDPA--PKHLQVAHIKNQEKRLIIILDGAQLESVKVGNNFELLNCDDHIGILKKNNRDPGSCRPDIAHQCLLMLLDSPLNRAGLLQVYIHTEKNVLIEVNPQTRIPRTFKRFAGLMVQLLHKFSVRASDGHMKLLKVIKNPVTDHLPVGCRKLAMSFSSKVVKNPRELVPGEE---PIAIVVGAMAHGQVKTDYTEDTLSISNYPLSGALTCSKLCSAFEEVWNII 236

[Close]

BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|1070131058|ref|XP_018347188.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Trachymyrmex septentrionalis] >gi|1009427413|gb|KYN45437.1| putative ribosome biogenesis protein NEP1 [Trachymyrmex septentrionalis])

HSP 1 Score: 286.574 bits (732), Expect = 1.746e-94
Identity = 128/207 (61.84%), Postives = 167/207 (80.68%), Query Frame = 0

Query:   52 DQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258
            ++RLIV+L  + LE+VK G  F LLN D+H+ IL+KY RD  + RPDITHQCLLML+DSPLNRAG LQV+IHT +NVLIE+NPQTRIPRTF RFAGLMVQLLHKY ++A+D  +KLLKVIKNPI++HLPVGC K+LMS++A++   P +LVP  D   P+ +VVGA+A G ++TDYT+++  + +YPLS A+ C+KL +AFE  WG+
Sbjct:   31 EKRLIVILENSQLESVKVGNSFELLNCDDHTNILKKYKRDPGTCRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKYGVRASDGPMKLLKVIKNPITNHLPVGCRKILMSFNASKVLNPRDLVPTED---PIAIVVGAMAHGQVKTDYTEDTYSISNYPLSGAIACSKLCTAFEEVWGI 234

[Close]

BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|383859383|ref|XP_003705174.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Megachile rotundata])

HSP 1 Score: 286.574 bits (732), Expect = 2.247e-94
Identity = 133/208 (63.94%), Postives = 164/208 (78.85%), Query Frame = 0

Query:   52 DQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259
            ++RLIV+L  A LE+VK G  F LLN D+H+ ILRK NRD  S RPDITHQCLLML+DSPLNRAG LQV++HT +NVLIEVNPQTRIPRTF RFAGLMVQLLHK+S++A+D  +KLLKVIKNP++DHLPVGC K+ MS+SA +   P ELVP   S  P+ + VGA+A G I  DYT+++  + +YPLS ALTC+KL +AFE  WG+ 
Sbjct:   32 EKRLIVILEKAQLESVKVGNSFELLNCDDHASILRKNNRDAGSCRPDITHQCLLMLMDSPLNRAGLLQVYVHTEKNVLIEVNPQTRIPRTFKRFAGLMVQLLHKFSVRASDGPMKLLKVIKNPVTDHLPVGCRKIAMSFSAKKVQNPRELVP---SDEPIAIAVGAMAHGQITPDYTEDTISISNYPLSGALTCSKLCTAFEEVWGII 236

[Close]

BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|985401778|ref|XP_015368623.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Diuraphis noxia])

HSP 1 Score: 286.189 bits (731), Expect = 2.469e-94
Identity = 140/259 (54.05%), Postives = 177/259 (68.34%), Query Frame = 0

Query:    1 MGKNRRKREQSESAAAETAAKKAKPATPADDDGVDPSRLERVNGASRPTAADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259
            MGK RR+ ++         AK+ K     DD+                   ++RLIV+L  A LETVK G+ F LLN DEH+ ILRK+ R+  + RPDI+HQCLLML DSPLNRAG LQV+IHT  NVLIE+NPQTRIPRTF RFAGLMVQLLHK+S++AA++S KL+KVIKNPI+DHLP GC KV  S+SA +   P ELVP      P+  +VGA+A G I+ DY +++  + +YPLSAALTC K+ SAFE +WG+ 
Sbjct:    1 MGKKRRRTDEDTEFDLTRKAKEVK-----DDN-------------------EKRLIVILENAQLETVKVGKSFELLNPDEHAHILRKHGREIGNCRPDISHQCLLMLFDSPLNRAGLLQVYIHTENNVLIEINPQTRIPRTFKRFAGLMVQLLHKFSVRAAETSAKLMKVIKNPITDHLPAGCRKVATSFSAEKPIKPSELVP---QDAPIAFIVGAMAHGQIKADYAEQTVAISNYPLSAALTCTKICSAFEDSWGIL 232

[Close]

BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|1070186528|ref|XP_018366271.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Trachymyrmex cornetzi])

HSP 1 Score: 286.189 bits (731), Expect = 2.697e-94
Identity = 129/207 (62.32%), Postives = 167/207 (80.68%), Query Frame = 0

Query:   52 DQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258
            ++RLIV+L  + LE+VK G  F LLN D+H+ IL+KYNRD  + RPDITHQCLLML+DSPLNRAG LQV+IHT +NVLIE+NPQTRIPRTF RFAGLMVQLLHKY ++A+D  +KLLKVIKNPI++HLPVGC K+LMS++A++   P +LV   D   P+ +VVGA+A G ++TDYT+++  + +YPLS A+ C+KL +AFE  WGV
Sbjct:   29 EKRLIVILENSQLESVKVGNSFELLNCDDHTNILKKYNRDPGTCRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKYGVRASDGPMKLLKVIKNPITNHLPVGCRKILMSFNASKVLNPRDLVLTED---PIAIVVGAMAHGQVKTDYTEDTYSISNYPLSGAIACSKLCTAFEEVWGV 232

[Close]

BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|801397685|ref|XP_012059260.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Atta cephalotes])

HSP 1 Score: 285.804 bits (730), Expect = 3.553e-94
Identity = 128/209 (61.24%), Postives = 167/209 (79.90%), Query Frame = 0

Query:   50 AADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258
            + ++RLIV+L  + LE+VK G  F LLN D+H+ IL+KY RD  + RPDITHQCLLML+DSPLNRAG LQV+IHT +NVLIE+NPQTRIPRTF RFAGLMVQLLHKY ++A+D  +KLLKVIKNPI++HLPVGC K+LMS++A++   P +LVP  D   P+ +VVGA+A G ++TDYT+++  + +YPLS A+ C+KL + FE  WGV
Sbjct:   29 SQEKRLIVILENSQLESVKVGNSFELLNCDDHTNILKKYKRDPGTCRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKYGVRASDGPMKLLKVIKNPITNHLPVGCRKILMSFNASKILNPRDLVPTED---PIAIVVGAMAHGQVKTDYTEDTYSISNYPLSGAIACSKLCTTFEEVWGV 234

The following BLAST results are available for this feature:

BLAST of probable ribosome biogenesis protein nep1 vs. L. salmonis genes
BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
BLAST of probable ribosome biogenesis protein nep1 vs. nr

BLAST of probable ribosome biogenesis protein nep1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 1


Match Name	E-value	Identity	Description
EMLSAG00000000678	9.896e-99	58.62	supercontig:LSalAtl2s:LSalAtl2s1107:261868:262668:...	[more]

BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|32699982\|sp\|Q9W4J5.2\|NEP1_DROME	2.698e-90	60.93	RecName: Full=Ribosomal RNA small subunit methyltr...	[more]
gi\|20532172\|sp\|Q92979.4\|NEP1_HUMAN	4.845e-90	60.43	RecName: Full=Ribosomal RNA small subunit methyltr...	[more]
gi\|20532163\|sp\|O35130.1\|NEP1_MOUSE	9.439e-89	59.13	RecName: Full=Ribosomal RNA small subunit methyltr...	[more]
gi\|20532185\|sp\|Q9XX15.1\|NEP1_CAEEL	1.112e-77	54.63	RecName: Full=Ribosomal RNA small subunit methyltr...	[more]
gi\|20532182\|sp\|Q9P8P7.1\|NEP1_CANAX	2.267e-75	54.42	RecName: Full=Ribosomal RNA small subunit methyltr...	[more]
gi\|20532165\|sp\|Q06287.1\|NEP1_YEAST	1.072e-73	52.56	RecName: Full=Ribosomal RNA small subunit methyltr...	[more]
gi\|6016598\|sp\|Q10107.2\|NEP1_SCHPO	7.832e-71	52.83	RecName: Full=Ribosomal RNA small subunit methyltr...	[more]
gi\|20532174\|sp\|Q96UP2.1\|NEP1_CANGA	3.178e-68	50.68	RecName: Full=Ribosomal RNA small subunit methyltr...	[more]
gi\|73921208\|sp\|Q5JI44.1\|NEP1_THEKO	3.234e-18	29.03	RecName: Full=Ribosomal RNA small subunit methyltr...	[more]
gi\|20532164\|sp\|O50087.1\|NEP1_PYRHO	8.171e-18	27.23	RecName: Full=Ribosomal RNA small subunit methyltr...	[more]

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BLAST of probable ribosome biogenesis protein nep1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|1069680266\|ref\|XP_018301791.1\|	4.755e-95	62.32	PREDICTED: ribosomal RNA small subunit methyltrans...	[more]
gi\|1230020984\|ref\|XP_022176596.1\|	5.644e-95	54.83	ribosomal RNA small subunit methyltransferase NEP1...	[more]
gi\|795058819\|ref\|XP_011872645.1\|	5.982e-95	63.77	PREDICTED: ribosomal RNA small subunit methyltrans...	[more]
gi\|746844618\|ref\|XP_011052573.1\|	9.467e-95	62.32	PREDICTED: ribosomal RNA small subunit methyltrans...	[more]
gi\|755944106\|ref\|XP_011299347.1\|	1.637e-94	57.92	PREDICTED: ribosomal RNA small subunit methyltrans...	[more]
gi\|1070131058\|ref\|XP_018347188.1\|	1.746e-94	61.84	PREDICTED: ribosomal RNA small subunit methyltrans...	[more]
gi\|383859383\|ref\|XP_003705174.1\|	2.247e-94	63.94	PREDICTED: ribosomal RNA small subunit methyltrans...	[more]
gi\|985401778\|ref\|XP_015368623.1\|	2.469e-94	54.05	PREDICTED: ribosomal RNA small subunit methyltrans...	[more]
gi\|1070186528\|ref\|XP_018366271.1\|	2.697e-94	62.32	PREDICTED: ribosomal RNA small subunit methyltrans...	[more]
gi\|801397685\|ref\|XP_012059260.1\|	3.553e-94	61.24	PREDICTED: ribosomal RNA small subunit methyltrans...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold17_size721972	supercontig	scaffold17_size721972:111068..111847 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	P:methylation

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold17_size721972-processed-gene-1.3-mRNA-1	snap_masked-scaffold17_size721972-processed-gene-1.3-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold17_size721972:111068..111847+

gene from alignment at scaffold17_size721972:111068..111847+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold17_size721972-processed-gene-1.3 ID=snap_masked-scaffold17_size721972-processed-gene-1.3|Name=probable ribosome biogenesis protein nep1|organism=Tigriopus kingsejongensis|type=gene|length=780bp|location=Sequence derived from alignment at scaffold17_size721972:111068..111847+ (Tigriopus kingsejongensis)
ATGGGCAAGAATCGGCGGAAGCGCGAGCAGAGCGAGAGTGCAGCGGCCGA
GACAGCGGCCAAGAAAGCCAAGCCCGCCACTCCGGCCGACGACGACGGCG
TGGACCCGAGCCGGCTCGAGCGGGTCAACGGCGCGAGTCGGCCCACGGCC
GCAGACCAGCGGCTGATCGTGGTCTTGGCCGGCGCCCACCTCGAGACGGT
CAAGTCGGGGCGCGGGTTCGGCCTGCTCAACGTGGACGAGCACTCGGGCA
TCCTGCGCAAGTACAACCGGGACTTCTCCTCGGCCCGCCCCGACATCACG
CACCAGTGCCTGCTCATGCTCTTGGACTCGCCGCTCAACCGGGCCGGACG
CCTCCAAGTCTTCATCCACACGGCCCAGAACGTGCTGATCGAGGTCAATC
CGCAGACGCGCATTCCGCGCACCTTCCCACGCTTCGCGGGCCTCATGGTC
CAGCTGCTGCACAAGTACTCGATCAAGGCCGCCGACTCCTCGGTCAAGCT
GCTCAAGGTCATCAAGAACCCGATCAGCGACCACCTGCCCGTGGGCTGCG
CCAAGGTGCTCATGAGCTACAGCGCCACGCGCACTTGCACGCCCGAGGAG
CTGGTGCCGCCGCCCGACTCGCACGTGCCCGTCTGCCTGGTGGTGGGCGC
CATCGCCAAGGGCGCCATCCAGACCGACTACACGGACGAGAGCGCCTGTC
TGGGCCACTATCCCCTGTCGGCCGCGCTGACCTGCGCCAAGCTCACCTCG
GCCTTCGAGAGCGCGTGGGGCGTGTTCTAA

Synonyms

The feature 'probable ribosome biogenesis protein nep1' has the following synonyms


Synonym
Tk09954

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