probable ribosome biogenesis protein nep1, snap_masked-scaffold17_size721972-processed-gene-1.3 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of probable ribosome biogenesis protein nep1 vs. L. salmonis genes
Match: EMLSAG00000000678 (supercontig:LSalAtl2s:LSalAtl2s1107:261868:262668:-1 gene:EMLSAG00000000678 transcript:EMLSAT00000000678 description:"maker-LSalAtl2s1107-augustus-gene-1.40") HSP 1 Score: 287.73 bits (735), Expect = 9.896e-99 Identity = 153/261 (58.62%), Postives = 188/261 (72.03%), Query Frame = 0 Query: 1 MGKNRRKREQSESAAAETAAKKAKPATPADDDGVDPSRLERVNGASRPTAADQRLIVVLAGAHLETVKSGR-GFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADS-SVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259 MGK KR+ A E AAKK K TP D + SRL + + RLIV+L AHLE +KS + F LLN D+H+G +RK R + RPDITHQCLLMLLDSPLNRAG LQV+I TA+NVLIE+NPQTRIPRTF RF+GLMVQLLHK+S++A+DS +KLLKVIKNPI+DHLP G K+ MS+S+ P +++ P + P+C+V+GAIAKGAI DYTD+ +G+YPLSAALTC K+TSAFE AWGVF Sbjct: 1 MGK---KRKLEREEAEEAAAKKQK--TPLDSGIKEVSRLA--------SKKEGRLIVILYAAHLEIIKSDKKSFDLLNSDQHTGFIRKTGRQLTDCRPDITHQCLLMLLDSPLNRAGLLQVYIQTAKNVLIEINPQTRIPRTFKRFSGLMVQLLHKFSVRASDSGGLKLLKVIKNPITDHLPPGIRKICMSFSSKEVVKPADII--PKNPEPICVVIGAIAKGAINPDYTDQDLRIGNYPLSAALTCTKITSAFEEAWGVF 246
BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|32699982|sp|Q9W4J5.2|NEP1_DROME (RecName: Full=Ribosomal RNA small subunit methyltransferase NEP1; AltName: Full=18S rRNA (pseudouridine-N1)-methyltransferase; AltName: Full=Ribosome biogenesis protein NEP1) HSP 1 Score: 270.396 bits (690), Expect = 2.698e-90 Identity = 131/215 (60.93%), Postives = 157/215 (73.02%), Query Frame = 0 Query: 49 TAADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDS-----HVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258 A ++RLI+VL GA LETVK F LLN D+H+GI+RK RD S RPDITHQCLLML DSPLNRAG LQVF+ T NVLIE+NPQTRIPRTF RFAGLMVQLLHK+ I+A DSS +L+ VIKNPI+DH+PVGC K MS+S +LVP D PV +V+GA A G ++TDYT+E + +YPLSAA+ C+K+ SAFE WGV Sbjct: 37 NATEKRLIIVLEGAQLETVKVHNTFELLNCDDHAGIMRKNQRDPGSCRPDITHQCLLMLFDSPLNRAGLLQVFVRTEHNVLIEINPQTRIPRTFKRFAGLMVQLLHKFQIRANDSSRRLMSVIKNPITDHVPVGCKKYAMSFSGKLLPNCRDLVPHGDETSASYDEPVVIVIGAFAHGVLKTDYTEELFSISNYPLSAAIACSKICSAFEEVWGV 251
BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|20532172|sp|Q92979.4|NEP1_HUMAN (RecName: Full=Ribosomal RNA small subunit methyltransferase NEP1; AltName: Full=18S rRNA (pseudouridine(1248)-N1)-methyltransferase; AltName: Full=18S rRNA Psi1248 methyltransferase; AltName: Full=Nucleolar protein EMG1 homolog; AltName: Full=Protein C2f; AltName: Full=Ribosome biogenesis protein NEP1) HSP 1 Score: 269.24 bits (687), Expect = 4.845e-90 Identity = 139/230 (60.43%), Postives = 162/230 (70.43%), Query Frame = 0 Query: 30 DDDGVDPSRLERVNGASRPTAADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259 D D + P R R+ ++ +RLIVVL GA LETVK G+ + LLN D+H IL K RD ARPDITHQ LLML+DSPLNRAG LQV+IHT +NVLIEVNPQTRIPRTF RF GLMVQLLHK S++AAD KLLKVIKNP+SDH PVGC KV S+S ELVP D P+ VVGA A G + +YT++ + +YPLSAALTCAKLT+AFE WGV Sbjct: 21 DWDALPPKR-PRLGAGNK--IGGRRLIVVLEGASLETVKVGKTYELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVGTSFSIPVVSDVRELVPSSD---PIVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWGVI 244
BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|20532163|sp|O35130.1|NEP1_MOUSE (RecName: Full=Ribosomal RNA small subunit methyltransferase NEP1; AltName: Full=18S rRNA (pseudouridine(1248)-N1)-methyltransferase; AltName: Full=18S rRNA Psi1248 methyltransferase; AltName: Full=Nucleolar protein EMG1 homolog; AltName: Full=Protein C2f; AltName: Full=Ribosome biogenesis protein NEP1) HSP 1 Score: 266.159 bits (679), Expect = 9.439e-89 Identity = 136/230 (59.13%), Postives = 160/230 (69.57%), Query Frame = 0 Query: 30 DDDGVDPSRLERVNGASRPTAADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259 D + P +L R+ S+ +RLIVVL GA LETVK G+ + LLN D H +L K RD RPDITHQ LLML+DSPLNRAG LQV+IHT +NVLIEVNPQTRIPRTF RF GLMVQLLHK S++AAD KLLKVIKNP+SDH PVGC K+ S+S ELVP D PV VVGA A G + +YT++ + +YPLSAALTCAK+T+AFE WGV Sbjct: 21 DWETTPPKKL-RLGAGSK--CGGRRLIVVLEGASLETVKVGKTYELLNCDRHKSMLLKNGRDPGEVRPDITHQSLLMLMDSPLNRAGLLQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKIGTSFSVEDISDIRELVPSSD---PVVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKVTTAFEEVWGVI 244
BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|20532185|sp|Q9XX15.1|NEP1_CAEEL (RecName: Full=Ribosomal RNA small subunit methyltransferase nep-1; AltName: Full=18S rRNA (pseudouridine-N1)-methyltransferase; AltName: Full=Ribosome biogenesis protein nep-1) HSP 1 Score: 237.654 bits (605), Expect = 1.112e-77 Identity = 112/205 (54.63%), Postives = 148/205 (72.20%), Query Frame = 0 Query: 55 LIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259 L VVL G LET K G + +L+ D+H+ LRK +D + RPDI HQCLL LLDSPLNRAG+L+VF T++NVL++V+PQ RIPRTF RF GLMVQLLHK SI+AA+++ KL+ V+KNP+S+HLPVG K+LMS++ +LV P++ P+ L++G IA+G I DY D + +YPLSAALTCAK+TS E WG+ Sbjct: 28 LYVVLEGCSLETAKVGGEYAILSSDKHANFLRKQKKDPADYRPDILHQCLLNLLDSPLNRAGKLRVFFRTSKNVLVDVSPQCRIPRTFDRFCGLMVQLLHKLSIRAAETTQKLMSVVKNPVSNHLPVGSRKMLMSFNVPELTMANKLV-APETDEPLVLIIGGIARGKIVVDYNDSETKISNYPLSAALTCAKVTSGLEEIWGII 231
BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|20532182|sp|Q9P8P7.1|NEP1_CANAX (RecName: Full=Ribosomal RNA small subunit methyltransferase NEP1; AltName: Full=18S rRNA (pseudouridine-N1)-methyltransferase) HSP 1 Score: 233.032 bits (593), Expect = 2.267e-75 Identity = 117/215 (54.42%), Postives = 146/215 (67.91%), Query Frame = 0 Query: 53 QRLIVVLAGAHLETVKSGRG------FGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGA--IQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259 QRLIVVL+ A LET K G F LLN D+H G+LRK RD + ARPDITHQCLL LLDSP+N+AGRLQV+I TA+ VLIEVNP RIPRTF RF+GLMVQLLHK SI++ +S LLKVIKNPI+DHLP C KV +S+ A ++ V D + +C+ VGA+A+G ++ DE L YPLSA++ C+K E WG++ Sbjct: 54 QRLIVVLSQACLETYKMNSGGPGGDRFALLNCDDHQGLLRKMGRDIAEARPDITHQCLLTLLDSPINKAGRLQVYIQTARGVLIEVNPSVRIPRTFKRFSGLMVQLLHKLSIRSENSKEVLLKVIKNPITDHLPTKCRKVTLSFDAELK-RVQDYVTTLDENESICVFVGAMARGKDNFADEFVDEKIGLSDYPLSASVACSKFCHGCEDVWGIY 267
BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|20532165|sp|Q06287.1|NEP1_YEAST (RecName: Full=Ribosomal RNA small subunit methyltransferase NEP1; AltName: Full=18S rRNA (pseudouridine(1189)-N1)-methyltransferase; Short=18S rRNA Psi1189 methyltransferase; AltName: Full=Essential for mitotic growth protein 1; AltName: Full=Nucleolar essential protein 1) HSP 1 Score: 228.024 bits (580), Expect = 1.072e-73 Identity = 113/215 (52.56%), Postives = 146/215 (67.91%), Query Frame = 0 Query: 53 QRLIVVLAGAHLETVK------SGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGA--IQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259 +R+IVVLA A LET K G + LLN D+H G+L+K RD S ARPDITHQCLL LLDSP+N+AG+LQV+I T++ +LIEVNP RIPRTF RF+GLMVQLLHK SI++ +S KLLKVIKNPI+DHLP C KV +S+ A ++ + D +C+ VGA+A+G +Y DE L +YPLSA++ C+K E AW + Sbjct: 39 KRMIVVLAMASLETHKISSNGPGGDKYVLLNCDDHQGLLKKMGRDISEARPDITHQCLLTLLDSPINKAGKLQVYIQTSRGILIEVNPTVRIPRTFKRFSGLMVQLLHKLSIRSVNSEEKLLKVIKNPITDHLPTKCRKVTLSFDAP-VIRVQDYIEKLDDDESICVFVGAMARGKDNFADEYVDEKVGLSNYPLSASVACSKFCHGAEDAWNIL 252
BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|6016598|sp|Q10107.2|NEP1_SCHPO (RecName: Full=Ribosomal RNA small subunit methyltransferase mra1; AltName: Full=18S rRNA (pseudouridine-N1)-methyltransferase; AltName: Full=Multicopy suppressor of ras1-deficiency protein) HSP 1 Score: 224.557 bits (571), Expect = 7.832e-71 Identity = 112/212 (52.83%), Postives = 144/212 (67.92%), Query Frame = 0 Query: 53 QRLIVVLAGAHLETVKSGRG----FGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGA--IQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258 QRLIVVL A LE K G+ + LLN D+H GIL+K NR+ + ARPDITHQCLL LLDSPLN+AGRLQV+IHTA+ VLIEVNP RIPRTF RF+GLMVQLLHK SI++ + + KLLKVIKNP++D+LP C K +S+ A T P + + + VC+ +GA+A G + DE + YPLSA++ C+K + E G+ Sbjct: 148 QRLIVVLDQACLEIYKVGKAKDAKYQLLNCDDHQGILKKLNRNIAQARPDITHQCLLTLLDSPLNKAGRLQVYIHTAKKVLIEVNPSVRIPRTFKRFSGLMVQLLHKLSIRSVNGNEKLLKVIKNPVTDYLPPNCRKATLSFDAP-TVPPRKYLETLQPNQSVCIAIGAMAHGPDDFSDGWVDEKISISDYPLSASIACSKFLHSMEDFLGI 358
BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|20532174|sp|Q96UP2.1|NEP1_CANGA (RecName: Full=Ribosomal RNA small subunit methyltransferase NEP1; AltName: Full=18S rRNA (pseudouridine-N1)-methyltransferase [[Candida] glabrata CBS 138]) HSP 1 Score: 213.386 bits (542), Expect = 3.178e-68 Identity = 112/221 (50.68%), Postives = 145/221 (65.61%), Query Frame = 0 Query: 43 NGASRPTAADQRLIVVLAGAHLETVKSG-RGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSS-VKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKG--AIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259 N +S + RL VVL A LET S LLN D+H GILRK RD + ARPDITHQCLL LLDSP+N+AG LQV+I T +NVLIEVNP RIPRTF RF+GLMVQLLHK SI++ +SS LL+V+KNP++ +LP C KV +S+ A P+E + S VC+ VGA+A+G + +Y D+ + +YPLSA++ C+K E AW + Sbjct: 13 NNSSVTKKQEPRLYVVLCEASLETYTSNDHRTSLLNCDDHQGILRKMGRDIAEARPDITHQCLLTLLDSPINKAGLLQVYILTKKNVLIEVNPSVRIPRTFKRFSGLMVQLLHKLSIRSMESSNTHLLRVVKNPVTKYLPADCRKVTLSFDA-EVMRPQEYLGDKQS---VCVFVGAMARGHDSFADEYVDDKIAISNYPLSASVACSKFCHGAEDAWAII 229
BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|73921208|sp|Q5JI44.1|NEP1_THEKO (RecName: Full=Ribosomal RNA small subunit methyltransferase Nep1; AltName: Full=16S rRNA (pseudouridine-N1-)-methyltransferase Nep1) HSP 1 Score: 83.5741 bits (205), Expect = 3.234e-18 Identity = 54/186 (29.03%), Postives = 83/186 (44.62%), Query Frame = 0 Query: 74 GLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLP-VGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258 +L+ H L+K RPDI H CLL L+S N+ G L+V++HT + +I + P+TR+PR + RF GLM L K A ++LL++ K P+ + + V + + P SH +VVG G L PL A +++ FE+A G+ Sbjct: 38 AILDSTYHHAALKKLPDGDRRGRPDIVHICLLNALESIANKEGFLRVYVHTRNDEVIHIKPETRLPRNYNRFLGLMESLFKK---GAVPEGLELLRIEKKPLESLIEDINPDTVFIMHEEGELIRPRSFGEILASHQNPVVVVGGFPHGDFMRPIEGTKVSLYREPLMAWTVVSEVIVNFEAALGL 220
BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Match: gi|20532164|sp|O50087.1|NEP1_PYRHO (RecName: Full=Ribosomal RNA small subunit methyltransferase Nep1; AltName: Full=16S rRNA (pseudouridine-N1-)-methyltransferase Nep1) HSP 1 Score: 82.8037 bits (203), Expect = 8.171e-18 Identity = 61/224 (27.23%), Postives = 98/224 (43.75%), Query Frame = 0 Query: 53 QRLIVVLAGAHLETV-----------------KSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHL-PVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258 +RL +++A A LETV K +L+ H LR+ RPDI H CLL LDS LN+ RL+V++HT + +I + P+TR+PR + RF GLM L K A ++LL++ K +++ + + V + + P+ D ++VG G ++ L PL A ++ ++E W V Sbjct: 5 KRLHLIIADAELETVPPEILDHPAIVNYAKRRKKRPEKIILDSTYHHAALRQLEDGERRGRPDIVHICLLNALDSILNKEDRLRVYVHTRNDYVIYIKPETRLPRNYNRFIGLMENLFEK---GAVPEDLELLRMEKKTLNELIEEINPDVVFIMHEEGELMIPKNFGKLLDKFKKPTVIVGGFPHGDFKSKVDGVKISLYREPLMAWTIVNEVIVSYE--WEV 223
BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|1325283645|ref|XP_023326523.1| (ribosomal RNA small subunit methyltransferase NEP1-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 313.153 bits (801), Expect = 4.942e-105 Identity = 146/209 (69.86%), Postives = 173/209 (82.78%), Query Frame = 0 Query: 51 ADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259 +++RLI++L GAHLET K+G+ F LLN+DEH GIL + RDFS+ARPDITHQCLLML DSPLNRAG LQV+I TA NVLIE+NP TRIPRTF RFAGLMVQLLHKYSI AA+S+VKLLKVIKNP++DHLPVG K+LMSYSA + P LV P+ P+ +VVGAIAKGAI TDYT+E+ + +YPLSAALTC+KL AFE AWG+F Sbjct: 28 SEKRLIIILEGAHLETCKAGKEFSLLNIDEHRGILNRAGRDFSTARPDITHQCLLMLFDSPLNRAGLLQVYIRTANNVLIEINPSTRIPRTFKRFAGLMVQLLHKYSITAAESTVKLLKVIKNPVTDHLPVGSRKLLMSYSAEKAVRPSTLV--PEGEEPIVIVVGAIAKGAIVTDYTEENISISNYPLSAALTCSKLCDAFEQAWGIF 234
BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|1153814571|ref|XP_020283141.1| (ribosomal RNA small subunit methyltransferase NEP1 [Pseudomyrmex gracilis]) HSP 1 Score: 296.204 bits (757), Expect = 3.275e-98 Identity = 145/259 (55.98%), Postives = 186/259 (71.81%), Query Frame = 0 Query: 1 MGKNRRKREQSESAAAETAAKKAKPATPADDDGVDPSRLERVNGASRPTAADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259 MG+ R+KR+ SE + PA PS L+ ++RL+VVL A LE+VK G F LLN D+H+ IL+K NRD + RPDITHQCLLML+DSPLNRAG LQV++HT +NVLIE+NPQTRIPRTF RFAGL+VQLLHKYS++A+D +KLLKVIKNP+SDHLPVGC K+LMS+SA + P E+VPP D P+ +VVGA+A G ++TDYT+++ + +YPLS A+TC+KL +AFE WGV Sbjct: 1 MGQKRKKRDDSEY--------EYDPA---------PSHLQ----IGHIKNQEKRLVVVLESAQLESVKVGSTFELLNCDDHANILKKNNRDPGTCRPDITHQCLLMLMDSPLNRAGLLQVYVHTEKNVLIEINPQTRIPRTFKRFAGLIVQLLHKYSVRASDGPMKLLKVIKNPVSDHLPVGCRKILMSFSANKVINPREIVPPED---PITIVVGAMAHGQVKTDYTEDTFSISNYPLSGAVTCSKLCTAFEEVWGVL 235
BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|749780041|ref|XP_011144495.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Harpegnathos saltator] >gi|307201554|gb|EFN81317.1| Probable ribosome biogenesis protein NEP1 [Harpegnathos saltator]) HSP 1 Score: 295.434 bits (755), Expect = 6.522e-98 Identity = 134/208 (64.42%), Postives = 169/208 (81.25%), Query Frame = 0 Query: 52 DQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259 ++RLIV+L A LE+VK+G F LLN D+H+ IL+KYNRD S RPDITHQCLLML+DSPLNRAG LQV+IHT +NVLIE+NPQTRIPRTF RFAGL+VQLLHKY+I+A+D +KLLKVIKNP+SDHLPVGC K+LMS+S+ + P ELVP S P+ +V+GA+A G ++TDYT++ + YPLSAA+TC+KL +AFE WG+ Sbjct: 31 EKRLIVILEYAQLESVKNGNNFELLNCDDHTAILKKYNRDPGSCRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLIVQLLHKYNIRASDGPMKLLKVIKNPVSDHLPVGCRKILMSFSSNKVQNPRELVP---SEEPIAIVIGAMAHGQVKTDYTEDIIAISKYPLSAAITCSKLCTAFEEVWGII 235
BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|769866503|ref|XP_011645237.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Pogonomyrmex barbatus]) HSP 1 Score: 295.049 bits (754), Expect = 7.518e-98 Identity = 133/207 (64.25%), Postives = 168/207 (81.16%), Query Frame = 0 Query: 52 DQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258 ++RLIV+L A LE+VK G F LLN D+H IL+KYNRD ++RPDI HQCLLML+DSPLNRAG LQV+IHT +NVLIE+NPQTRIPRTF RFAGLMVQLLHKYS++A+D +KLLKVIKNP+++HLPVGC K+LMS+S+ + P ELVP D P+ +VVGA+A G ++TDYT+E+ + +YPLS ALTC+KL +AFE WG+ Sbjct: 31 EKRLIVILENAQLESVKVGNSFELLNCDDHVSILKKYNRDPGTSRPDIAHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKYSVRASDGPMKLLKVIKNPVTNHLPVGCRKILMSFSSNKVLNPRELVPTED---PIAIVVGAMAHGQVKTDYTEETFAISNYPLSGALTCSKLCTAFEEVWGI 234
BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|861635185|gb|KMQ91481.1| (ribosomal rna small subunit methyltransferase nep1-like protein [Lasius niger]) HSP 1 Score: 295.049 bits (754), Expect = 9.054e-98 Identity = 134/207 (64.73%), Postives = 166/207 (80.19%), Query Frame = 0 Query: 52 DQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258 ++RLIV+L A LE+VKSG F LLN D+H IL+KYNRD + RPDI HQCLLML+DSPLNRAG LQV+IHT +NVLIE+NPQTRIPRTF RFAGLMVQLLHKY ++A+D +KLLKVIKNPISDHLPVGC K+LMS+SA + P E VP D P+ +VVGA+A G ++TDYT+++ + +YPLS A+TC+KL +AFE WG+ Sbjct: 31 EKRLIVILENAQLESVKSGNSFELLNCDDHINILKKYNRDPGTCRPDIVHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKYGVRASDGPMKLLKVIKNPISDHLPVGCHKILMSFSANKVLNPREFVPSED---PIAIVVGAMAHGQVKTDYTEDTISISNYPLSGAVTCSKLCTAFEEVWGI 234
BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|951571486|ref|XP_014483947.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Dinoponera quadriceps] >gi|951571489|ref|XP_014483948.1| PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Dinoponera quadriceps]) HSP 1 Score: 292.352 bits (747), Expect = 1.037e-96 Identity = 135/208 (64.90%), Postives = 166/208 (79.81%), Query Frame = 0 Query: 52 DQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259 ++RLIV+L A LE+VK+G F LLN D+H I +KYNRD S RPDITHQCLLML+DSPLNRAG LQV++HT +NVLIE+NPQTRIPRTF RFAGLMVQLLHKYSI+A+D ++LLKVIKNP+SDHLPVGC K+LMS+SA + P EL P S P+ +VVGA+A G I+TDYT+++ + YPLSAA+TC+KL AFE WG+ Sbjct: 31 EKRLIVILEQAQLESVKNGNSFELLNCDDHPAIYKKYNRDPGSCRPDITHQCLLMLMDSPLNRAGLLQVYVHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKYSIRASDGPMRLLKVIKNPVSDHLPVGCRKILMSFSADKVQHPRELAP---SEEPIAIVVGAMAHGQIKTDYTEDTISISKYPLSAAITCSKLCIAFEEVWGII 235
BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|1069808360|ref|XP_018328143.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Agrilus planipennis]) HSP 1 Score: 291.582 bits (745), Expect = 2.185e-96 Identity = 140/240 (58.33%), Postives = 174/240 (72.50%), Query Frame = 0 Query: 20 AKKAKPATPADDDGVDPSRLERVNGASRPTAADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259 KK K DD+ DP V G + ++RLIV+L A LE+VK G F LLN D+H+ L+K NRD S RPDI HQCLLMLLDSPLNRA LQV++HT N+LIE+NPQTRIPRTF RFAGLMVQLLHK+S++A+D ++KLLKVIKNP++DHLPVG K+ MS+S+ + P ELVP + PV +VVGA+A G ++ DYT+E+ + +YPLSAALTC KL SAFE AWGV Sbjct: 2 GKKRKLKNKEDDNEFDPVPKHFVTGHIK--NQEKRLIVILEEAQLESVKVGNSFDLLNCDDHANFLKKSNRDPGSCRPDIVHQCLLMLLDSPLNRAALLQVYVHTNHNILIEINPQTRIPRTFKRFAGLMVQLLHKFSVRASDGNMKLLKVIKNPVTDHLPVGVKKICMSFSSNKVVNPRELVPQTED--PVVVVVGAMAHGKLEIDYTEETVAISNYPLSAALTCTKLCSAFEEAWGVL 237
BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|1032752921|ref|XP_003425868.2| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Nasonia vitripennis]) HSP 1 Score: 291.197 bits (744), Expect = 3.433e-96 Identity = 142/259 (54.83%), Postives = 183/259 (70.66%), Query Frame = 0 Query: 1 MGKNRRKREQSESAAAETAAKKAKPATPADDDGVDPSRLERVNGASRPTAADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259 MGK R+ R+ ++ + A K + A + + +RLIV+L A LE+VK G F LLN D+H+GIL+K +R+ S+RPDITHQCLLML+DSPLNRAG LQV+IHT +NVLIEVNPQTRIPRTF RFAGLMVQLLHKYS++A+D +KLLK+IKNPI+DHLPVGC K+ MS+SA + P ELVP + P+ +VVGA+A G ++ DYT+E+ + +YPLSAA+TC+KL S FE WGV Sbjct: 5 MGKKRKNRDDNDETEFDPAPKHLQTAHIKNQE--------------------KRLIVILENAQLESVKVGSSFELLNCDDHAGILKKNSREPGSSRPDITHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEVNPQTRIPRTFKRFAGLMVQLLHKYSVRASDGPMKLLKIIKNPITDHLPVGCKKLGMSFSAKKVTHPRELVPADE---PIAIVVGAMAHGQVKADYTEETFSISNYPLSAAITCSKLCSGFEEVWGVI 240
BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|826500104|ref|XP_012541838.1| (PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Monomorium pharaonis]) HSP 1 Score: 289.271 bits (739), Expect = 1.759e-95 Identity = 141/258 (54.65%), Postives = 181/258 (70.16%), Query Frame = 0 Query: 1 MGKNRRKREQSESAAAETAAKKAKPATPADDDGVDPSRLERVNGASRPTAADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGV 258 MG R+KR++S+ D G P L+ ++RLIV+L A LE+VK G F LLN D+H+ IL+K NRD + RPDI HQCLLML+DSPLNRAG LQV+IHT +NVLIE+NPQTRIPRTF RFAGLMVQLLHKY ++A+D +KLLKVIKNP+++HLPVGC K+LMS+SA + P ELVP D P+ +VVGA+A G ++TDYT+E+ + +YPLS A+TC+KL +AFE WG+ Sbjct: 1 MGNKRKKRDESDYEY---------------DSG--PKHLQ----IGHIKNQEKRLIVILENAQLESVKVGNSFELLNCDDHTNILKKNNRDPGTCRPDIAHQCLLMLMDSPLNRAGLLQVYIHTEKNVLIEINPQTRIPRTFKRFAGLMVQLLHKYGVRASDGPMKLLKVIKNPVTNHLPVGCHKLLMSFSANKVLNPRELVPDKD---PIAIVVGAMAHGQVKTDYTEETFSISNYPLSGAVTCSKLCTAFEEVWGI 234
BLAST of probable ribosome biogenesis protein nep1 vs. nr
Match: gi|817181647|ref|XP_012275371.1| (ribosomal RNA small subunit methyltransferase NEP1 isoform X2 [Orussus abietinus]) HSP 1 Score: 288.886 bits (738), Expect = 2.217e-95 Identity = 138/259 (53.28%), Postives = 183/259 (70.66%), Query Frame = 0 Query: 1 MGKNRRKREQSESAAAETAAKKAKPATPADDDGVDPSRLERVNGASRPTAADQRLIVVLAGAHLETVKSGRGFGLLNVDEHSGILRKYNRDFSSARPDITHQCLLMLLDSPLNRAGRLQVFIHTAQNVLIEVNPQTRIPRTFPRFAGLMVQLLHKYSIKAADSSVKLLKVIKNPISDHLPVGCAKVLMSYSATRTCTPEELVPPPDSHVPVCLVVGAIAKGAIQTDYTDESACLGHYPLSAALTCAKLTSAFESAWGVF 259 MG+ R+ RE E DD G DP + + + ++RLI++L A LE+VK G F LLN D+H+ +L+KYNR+ + RPDITHQCLLML+DSPLNRAG LQV++HT +N LIE+NPQTRIPRTF RFAGLMVQLLHK+S++A++ S+KLLKVIKNP+++HLPVGC K+ MS+S+ P ELVP + P+ +VVGA+A G +Q DYT+++ + +YPLSAA+TC+KL SAFE WGV Sbjct: 1 MGQKRKNREAKE-----------------DDYGYDP--VPKHFQVAHIKNQEKRLIIILEQAQLESVKVGNNFQLLNCDDHTSVLKKYNREPGTCRPDITHQCLLMLMDSPLNRAGLLQVYVHTERNALIEINPQTRIPRTFKRFAGLMVQLLHKFSVRASNGSMKLLKVIKNPVTNHLPVGCRKIAMSFSSKVVKNPRELVPADE---PIAIVVGAMAHGQVQADYTEDTYSISNYPLSAAITCSKLCSAFEETWGVL 237 The following BLAST results are available for this feature:
BLAST of probable ribosome biogenesis protein nep1 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of probable ribosome biogenesis protein nep1 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of probable ribosome biogenesis protein nep1 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold17_size721972:111068..111847+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold17_size721972-processed-gene-1.3 ID=snap_masked-scaffold17_size721972-processed-gene-1.3|Name=probable ribosome biogenesis protein nep1|organism=Tigriopus kingsejongensis|type=gene|length=780bp|location=Sequence derived from alignment at scaffold17_size721972:111068..111847+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'probable ribosome biogenesis protein nep1' has the following synonyms
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