hypothetical protein DAPPUDRAFT_215551, snap_masked-scaffold1912_size25034-processed-gene-0.4 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. L. salmonis genes
Match: EMLSAG00000001138 (supercontig:LSalAtl2s:LSalAtl2s118:399399:402184:1 gene:EMLSAG00000001138 transcript:EMLSAT00000001138 description:"maker-LSalAtl2s118-augustus-gene-4.15") HSP 1 Score: 66.6254 bits (161), Expect = 9.489e-15 Identity = 38/64 (59.38%), Postives = 43/64 (67.19%), Query Frame = 0 Query: 59 AVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRRE 122 A+V+QVLDELGLQLN L VP G +A PG K+ + A GG DADADLQ RLD LRRE Sbjct: 162 AIVSQVLDELGLQLNDQLKD--VPAGXSTLAAPGAKEK-KAVAAGGVEDADADLQERLDALRRE 222
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. SwissProt
Match: gi|73917738|sp|Q7ZW25.1|CHM2A_DANRE (RecName: Full=Charged multivesicular body protein 2a; AltName: Full=Chromatin-modifying protein 2a; Short=CHMP2a) HSP 1 Score: 52.7582 bits (125), Expect = 2.975e-8 Identity = 41/71 (57.75%), Postives = 52/71 (73.24%), Query Frame = 0 Query: 51 EDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRR 121 EDDEEESDAVV+QVLDELGL L+ +L+ + GSL+VA GK+A P + DADADL+ RL++LRR Sbjct: 154 EDDEEESDAVVSQVLDELGLTLSDELSNLPATGGSLSVA--AGKKAEPQPTLA---DADADLEERLNNLRR 219
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. SwissProt
Match: gi|75206464|sp|Q9SKI2.2|VPS2A_ARATH (RecName: Full=Vacuolar protein sorting-associated protein 2 homolog 1; Short=AtVPS2-1; AltName: Full=Charged multivesicular body protein 2 homolog 1; AltName: Full=ESCRT-III complex subunit VPS2 homolog 1; AltName: Full=SNF7-like protein) HSP 1 Score: 52.7582 bits (125), Expect = 3.390e-8 Identity = 31/65 (47.69%), Postives = 42/65 (64.62%), Query Frame = 0 Query: 60 VVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDA---DADLQARLDDLRR 121 +V+QVLDE+G+ +NQ+L P+G AVA P K V GA D+ D+DLQARLD+LR+ Sbjct: 164 LVSQVLDEIGIDINQELVN--APSG--AVAVPAAKNKVVQAEATGAEDSGGIDSDLQARLDNLRK 224
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|1253266322|gb|PDM62504.1| (vps-2 [Pristionchus pacificus]) HSP 1 Score: 77.7962 bits (190), Expect = 1.187e-14 Identity = 43/87 (49.43%), Postives = 57/87 (65.52%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGA----VGGAT-----DADADLQARLDDLRRE 122 DDA+G+E D+ ES+ +VNQVLDELG+Q+ +++ G+ VP G + A G VP GA GG++ D D DLQARLD LRRE Sbjct: 197 DDALGDEADDAESEQIVNQVLDELGIQMGEEMGGLVVPTGQIGAAERTGPAKVPIGAGGVPAGGSSASASNDLDDDLQARLDALRRE 283
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|597836144|gb|EYB85793.1| (hypothetical protein Y032_0290g1524 [Ancylostoma ceylanicum]) HSP 1 Score: 73.9442 bits (180), Expect = 1.745e-14 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRRE 122 DDA+G+E D+ ES+ +VNQVLDELG+Q+ +++AG+ G + V+ GG++A A GGA D D DLQARLD LRRE Sbjct: 46 DDALGDEADDAESEQIVNQVLDELGIQMGEEMAGLPTTGGQIGVS--GGEKARQPVAAGGA-DIDDDLQARLDQLRRE 120
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|748336599|gb|KIH46868.1| (SNF7 family protein [Ancylostoma duodenale]) HSP 1 Score: 74.7146 bits (182), Expect = 2.040e-14 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRRE 122 DDA+G+E D+ ES+ +VNQVLDELG+Q+ +++AG+ G + V+ GG++A A GGA D D DLQARLD LRRE Sbjct: 87 DDALGDEADDAESEQIVNQVLDELGIQMGEEMAGLPTTGGQIGVS--GGEKARQPVAAGGA-DIDDDLQARLDQLRRE 161
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|510856045|gb|EPB71841.1| (SNF7 family protein [Ancylostoma ceylanicum]) HSP 1 Score: 75.0998 bits (183), Expect = 2.862e-14 Identity = 42/78 (53.85%), Postives = 57/78 (73.08%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRRE 122 DDA+G+E D+ ES+ +VNQVLDELG+Q+ +++AG+ G + V+ GG++A A GGA D D DLQARLD LRRE Sbjct: 123 DDALGDEADDAESEQIVNQVLDELGIQMGEEMAGLPTTGGQIGVS--GGEKARQPVAAGGA-DIDDDLQARLDQLRRE 197
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|1174757342|gb|OQV25290.1| (Charged multivesicular body protein 2a [Hypsibius dujardini]) HSP 1 Score: 76.2554 bits (186), Expect = 3.545e-14 Identity = 39/82 (47.56%), Postives = 58/82 (70.73%), Query Frame = 0 Query: 43 IEDDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGG--KQAVPSGAVGGATDADADLQARLDDLRRE 122 + DDAMG+++DEEE+D +VN+VLDELGLQ+ + + + G++A PGG + P+ G +D DADL+ARL++LRRE Sbjct: 205 VMDDAMGDDNDEEETDQIVNKVLDELGLQIADQVGNLPIGQGTVA---PGGGVAKKTPTAQPAGGSDLDADLEARLENLRRE 283
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|1199401281|ref|XP_021196044.1| (charged multivesicular body protein 2a [Helicoverpa armigera]) HSP 1 Score: 75.0998 bits (183), Expect = 4.815e-14 Identity = 48/82 (58.54%), Postives = 57/82 (69.51%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVA--TPGGKQAVPSGAVGGAT--DADADLQARLDDLRRE 122 D+AM +DDEEESD VV+Q+LDELGLQLN L+G+ GSL+VA TPG V G DADA+LQARLD+LRRE Sbjct: 148 DEAMAADDDEEESDQVVSQILDELGLQLNDTLSGLPQATGSLSVAARTPGAAAPVAVAGGSGPAPPDADAELQARLDNLRRE 229
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|1228392780|ref|XP_021955087.1| (charged multivesicular body protein 2a-like [Folsomia candida] >gi|1228392782|ref|XP_021955088.1| charged multivesicular body protein 2a-like [Folsomia candida] >gi|1215266843|gb|OXA53157.1| Charged multivesicular body protein 2a [Folsomia candida]) HSP 1 Score: 74.7146 bits (182), Expect = 6.111e-14 Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRRE 122 DDA+G E+DE+ESDA+V+QVLDELGLQL L+ + +G L P K+ V +D DADLQARLD+LRRE Sbjct: 148 DDALGGEEDEDESDAIVSQVLDELGLQLKDQLSSLPAASGGL--KNPAAKEPV----AAALSDTDADLQARLDNLRRE 219
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|939682005|ref|XP_014285936.1| (PREDICTED: charged multivesicular body protein 2a [Halyomorpha halys]) HSP 1 Score: 74.7146 bits (182), Expect = 7.026e-14 Identity = 40/65 (61.54%), Postives = 50/65 (76.92%), Query Frame = 0 Query: 60 VVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVP-SGAVGG-ATDADADLQARLDDLRRE 122 +V+QVLDELGLQLN L+G+ P + +++ GGK A P +GA GG TDADADLQARLD+LRRE Sbjct: 163 IVSQVLDELGLQLNDQLSGL--PQATASLSVSGGKTATPVAGATGGMTTDADADLQARLDNLRRE 225
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|1061470211|gb|ODM89684.1| (Charged multivesicular body protein 2a [Orchesella cincta]) HSP 1 Score: 73.9442 bits (180), Expect = 1.213e-13 Identity = 44/81 (54.32%), Postives = 54/81 (66.67%), Query Frame = 0 Query: 42 QIEDDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRRE 122 ++ DDA+G ++DEEES+AVV QVLDELGLQ+ LA + G L TPG Q A +D DADLQARLD+LRRE Sbjct: 145 EVVDDALGGDNDEEESEAVVAQVLDELGLQIGDQLAALPTAQGRL--ETPGRNQRELVAA--AVSDVDADLQARLDNLRRE 221
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Match: gi|402587699|gb|EJW81634.1| (SNF7 family protein [Wuchereria bancrofti]) HSP 1 Score: 73.559 bits (179), Expect = 1.293e-13 Identity = 40/78 (51.28%), Postives = 56/78 (71.79%), Query Frame = 0 Query: 45 DDAMGEEDDEEESDAVVNQVLDELGLQLNQDLAGMAVPNGSLAVATPGGKQAVPSGAVGGATDADADLQARLDDLRRE 122 DDA+ +E DEEE++A+V QVLDELG+Q+N++L+ + GSL P + P A+ +DADADLQARL++LRRE Sbjct: 135 DDAIADEGDEEETEAIVAQVLDELGIQMNEELSAIPAAQGSL---KPADQNRQPQPAL---SDADADLQARLENLRRE 206 The following BLAST results are available for this feature:
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 2
BLAST of hypothetical protein DAPPUDRAFT_215551 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold1912_size25034:13034..17578- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold1912_size25034-processed-gene-0.4 ID=snap_masked-scaffold1912_size25034-processed-gene-0.4|Name=hypothetical protein DAPPUDRAFT_215551|organism=Tigriopus kingsejongensis|type=gene|length=4545bp|location=Sequence derived from alignment at scaffold1912_size25034:13034..17578- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'hypothetical protein DAPPUDRAFT_215551' has the following synonyms
Add to Basket
|