30s ribosomal protein s12, snap_masked-scaffold2261_size17928-processed-gene-0.0 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of 30s ribosomal protein s12 vs. L. salmonis genes
Match: EMLSAG00000004150 (supercontig:LSalAtl2s:LSalAtl2s219:335604:337147:1 gene:EMLSAG00000004150 transcript:EMLSAT00000004150 description:"maker-LSalAtl2s219-augustus-gene-3.23") HSP 1 Score: 96.2857 bits (238), Expect = 1.076e-26 Identity = 47/85 (55.29%), Postives = 61/85 (71.76%), Query Frame = 0
Query: 19 SKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLD 103
SK+P N P +GV L+ R PKKPNSA RK +RL++G EV AY+ GEGHNLQEH++VL+R G ++D+PGV+ VRG LD
Sbjct: 77 SKNPLGYNVPFAKGVVLRTVIRKPKKPNSANRKCVLVRLSSGKEVTAYVPGEGHNLQEHNVVLVRVGNLQDVPGVKLKCVRGKLD 161
BLAST of 30s ribosomal protein s12 vs. SwissProt
Match: gi|90111771|sp|Q39KH2.1|RS12_BURL3 (RecName: Full=30S ribosomal protein S12 >gi|119366758|sp|Q1BRU3.1|RS12_BURCA RecName: Full=30S ribosomal protein S12 >gi|122324271|sp|Q0BJ51.1|RS12_BURCM RecName: Full=30S ribosomal protein S12 >gi|158512276|sp|A0K3M0.1|RS12_BURCH RecName: Full=30S ribosomal protein S12 >gi|166231852|sp|A4JAN5.1|RS12_BURVG RecName: Full=30S ribosomal protein S12 >gi|226708469|sp|B1YRC5.1|RS12_BURA4 RecName: Full=30S ribosomal protein S12 >gi|226708470|sp|B1JU17.1|RS12_BURCC RecName: Full=30S ribosomal protein S12 >gi|226708471|sp|B4E5B5.1|RS12_BURCJ RecName: Full=30S ribosomal protein S12 >gi|226708472|sp|A9ADI8.1|RS12_BURM1 RecName: Full=30S ribosomal protein S12) HSP 1 Score: 218.779 bits (556), Expect = 5.033e-74 Identity = 105/126 (83.33%), Postives = 115/126 (91.27%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPKADK 126
MPTINQLVRKGR+ TKSKSPAL +CPQRRGVC +VYT TPKKPNSALRKVAK+RLTNG+EVI+YIGGEGHNLQEHS+VLIRGGRVKDLPGVRYH+VRGSLDT GV RKQ+RSKYGAK+ KA K
Sbjct: 1 MPTINQLVRKGRQSETTKSKSPALQDCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHMVRGSLDTQGVKDRKQARSKYGAKRAKAAK 126
BLAST of 30s ribosomal protein s12 vs. SwissProt
Match: gi|226708474|sp|B2T756.1|RS12_BURPP (RecName: Full=30S ribosomal protein S12) HSP 1 Score: 218.779 bits (556), Expect = 6.199e-74 Identity = 105/126 (83.33%), Postives = 115/126 (91.27%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPKADK 126
MPTINQLVRKGR+ TKSKSPAL +CPQRRGVC +VYT TPKKPNSALRKVAK+RLTNG+EVI+YIGGEGHNLQEHS+VLIRGGRVKDLPGVRYH+VRGSLDT GV RKQ+RSKYGAK+ KA K
Sbjct: 1 MPTINQLVRKGRQSETTKSKSPALQDCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHMVRGSLDTQGVKDRKQARSKYGAKRAKAGK 126
BLAST of 30s ribosomal protein s12 vs. SwissProt
Match: gi|60390787|sp|Q63Q06.1|RS12_BURPS (RecName: Full=30S ribosomal protein S12 >gi|90111770|sp|Q3JMQ7.1|RS12_BURP1 RecName: Full=30S ribosomal protein S12 >gi|115305655|sp|Q2SU22.1|RS12_BURTA RecName: Full=30S ribosomal protein S12 >gi|158513538|sp|A3P0B8.1|RS12_BURP0 RecName: Full=30S ribosomal protein S12 >gi|166231851|sp|A3NEI4.1|RS12_BURP6 RecName: Full=30S ribosomal protein S12) HSP 1 Score: 218.394 bits (555), Expect = 8.245e-74 Identity = 105/126 (83.33%), Postives = 114/126 (90.48%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPKADK 126
MPTINQLVRKGR TKSKSPAL +CPQRRGVC +VYT TPKKPNSALRKVAK+RLTNG+EVI+YIGGEGHNLQEHS+VLIRGGRVKDLPGVRYH+VRGSLDT GV RKQ+RSKYGAK+ KA K
Sbjct: 1 MPTINQLVRKGRASETTKSKSPALQDCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHMVRGSLDTQGVKDRKQARSKYGAKRAKAAK 126
BLAST of 30s ribosomal protein s12 vs. SwissProt
Match: gi|226708486|sp|A9BPR3.1|RS12_DELAS (RecName: Full=30S ribosomal protein S12) HSP 1 Score: 218.009 bits (554), Expect = 1.005e-73 Identity = 105/124 (84.68%), Postives = 113/124 (91.13%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPKA 124
MPTINQLVR+GR V KSKSPA+ NCPQRRGVC +VYT TPKKPNSALRKVAK+RLTNG+EVI+YIGGEGHNLQEHS+VL+RGGRVKDLPGVRYHIVRGSLD GV RKQSRSKYGAKKPKA
Sbjct: 1 MPTINQLVRQGRTVEVVKSKSPAMENCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGSLDLQGVKDRKQSRSKYGAKKPKA 124
BLAST of 30s ribosomal protein s12 vs. SwissProt
Match: gi|226708473|sp|B2JIH1.1|RS12_BURP8 (RecName: Full=30S ribosomal protein S12) HSP 1 Score: 218.009 bits (554), Expect = 1.146e-73 Identity = 105/126 (83.33%), Postives = 114/126 (90.48%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPKADK 126
MPTINQLVRKGR TKSKSPAL +CPQRRGVC +VYT TPKKPNSALRKVAK+RLTNG+EVI+YIGGEGHNLQEHS+VLIRGGRVKDLPGVRYH+VRGSLDT GV RKQ+RSKYGAK+ KA K
Sbjct: 1 MPTINQLVRKGRTSETTKSKSPALQDCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHMVRGSLDTQGVKDRKQARSKYGAKRAKAGK 126
BLAST of 30s ribosomal protein s12 vs. SwissProt
Match: gi|119366759|sp|Q13TG5.1|RS12_BURXL (RecName: Full=30S ribosomal protein S12) HSP 1 Score: 217.624 bits (553), Expect = 1.336e-73 Identity = 105/126 (83.33%), Postives = 114/126 (90.48%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPKADK 126
MPTINQLVRKGR TKSKSPAL +CPQRRGVC +VYT TPKKPNSALRKVAK+RLTNG+EVI+YIGGEGHNLQEHS+VLIRGGRVKDLPGVRYH+VRGSLDT GV RKQ+RSKYGAK+ KA K
Sbjct: 1 MPTINQLVRKGRASETTKSKSPALQDCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHMVRGSLDTQGVKDRKQARSKYGAKRAKAGK 126
BLAST of 30s ribosomal protein s12 vs. SwissProt
Match: gi|60390783|sp|Q62GK0.1|RS12_BURMA (RecName: Full=30S ribosomal protein S12 >gi|166231848|sp|A3MRU9.1|RS12_BURM7 RecName: Full=30S ribosomal protein S12 >gi|166231849|sp|A2S7H1.1|RS12_BURM9 RecName: Full=30S ribosomal protein S12 >gi|166231850|sp|A1V8A8.1|RS12_BURMS RecName: Full=30S ribosomal protein S12) HSP 1 Score: 217.238 bits (552), Expect = 2.165e-73 Identity = 104/126 (82.54%), Postives = 114/126 (90.48%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPKADK 126
MPTINQLVRKGR TKSKSPAL +CPQRRGVC +VYT TPKKPNSALRKVAK+RLTNG+EVI+YIGGEGHNLQEHS+VLIRGGRVKDLPGVRYH+VRGSLDT GV R+Q+RSKYGAK+ KA K
Sbjct: 1 MPTINQLVRKGRASETTKSKSPALQDCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHMVRGSLDTQGVKDRRQARSKYGAKRAKAAK 126
BLAST of 30s ribosomal protein s12 vs. SwissProt
Match: gi|158513892|sp|A1W2Q2.1|RS12_ACISJ (RecName: Full=30S ribosomal protein S12 >gi|254811084|sp|B9MB68.1|RS12_ACIET RecName: Full=30S ribosomal protein S12) HSP 1 Score: 216.853 bits (551), Expect = 2.581e-73 Identity = 104/124 (83.87%), Postives = 113/124 (91.13%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPKA 124
MPTINQLVR+GR V KSKSPA+ NCPQRRGVC +VYT TPKKPNSALRKVAK+RLTNG+EVI+YIGGEGHNLQEHS+VL+RGGRVKDLPGVRYHIVRGSLD GV RKQ+RSKYGAKKPKA
Sbjct: 1 MPTINQLVRQGRTVEVVKSKSPAMENCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGSLDLQGVKDRKQARSKYGAKKPKA 124
BLAST of 30s ribosomal protein s12 vs. SwissProt
Match: gi|226712611|sp|B1Y7G7.1|RS12_LEPCP (RecName: Full=30S ribosomal protein S12) HSP 1 Score: 216.853 bits (551), Expect = 3.043e-73 Identity = 103/123 (83.74%), Postives = 114/123 (92.68%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPK 123
MPTINQLVR+GR+ VTKSKSPA+ NCPQRRGVC +VYT TPKKPNSALRKVAK+RLTNG+EVI+YIGGEGHNLQEHS+VL+RGGRVKDLPGVRYHIVRGSLD GV RKQSRSKYG+K+PK
Sbjct: 1 MPTINQLVRQGREVEVTKSKSPAMQNCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGSLDLQGVKDRKQSRSKYGSKRPK 123
BLAST of 30s ribosomal protein s12 vs. SwissProt
Match: gi|122946534|sp|Q0K609.1|RS12_CUPNH (RecName: Full=30S ribosomal protein S12 >gi|226708483|sp|B3R7T3.1|RS12_CUPTR RecName: Full=30S ribosomal protein S12) HSP 1 Score: 215.312 bits (547), Expect = 1.099e-72 Identity = 105/124 (84.68%), Postives = 112/124 (90.32%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPKA 124
MPTINQLVRK R V KSKSPAL NCPQRRGVC +VYT TPKKPNSALRKVAK+RLTNG+EVI+YIGGEGHNLQEHS+VLIRGGRVKDLPGVRYHIVRGSLD GV RKQ+RSKYGAK+PKA
Sbjct: 1 MPTINQLVRKPRVSEVVKSKSPALENCPQRRGVCTRVYTTTPKKPNSALRKVAKVRLTNGFEVISYIGGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGSLDLQGVKDRKQARSKYGAKRPKA 124
BLAST of 30s ribosomal protein s12 vs. nr
Match: gi|1200467453|gb|OUV82763.1| (30S ribosomal protein S12 [Verrucomicrobiaceae bacterium TMED137]) HSP 1 Score: 244.973 bits (624), Expect = 5.947e-82 Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPK 123
MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAK+RLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQ RSKYGAKKPK
Sbjct: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKVRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQGRSKYGAKKPK 123
BLAST of 30s ribosomal protein s12 vs. nr
Match: gi|517940283|ref|WP_019110491.1| (MULTISPECIES: 30S ribosomal protein S12 [unclassified Verrucomicrobia (miscellaneous)]) HSP 1 Score: 242.276 bits (617), Expect = 8.754e-81 Identity = 119/123 (96.75%), Postives = 121/123 (98.37%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPK 123
MPTINQLVRKGRKKAV KSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAK+RLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQ+RSKYGAKK K
Sbjct: 1 MPTINQLVRKGRKKAVAKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKVRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQARSKYGAKKSK 123
BLAST of 30s ribosomal protein s12 vs. nr
Match: gi|1200395051|gb|OUV13008.1| (30S ribosomal protein S12 [Verrucomicrobiaceae bacterium TMED86]) HSP 1 Score: 239.58 bits (610), Expect = 8.973e-80 Identity = 118/123 (95.93%), Postives = 120/123 (97.56%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPK 123
MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAK+RLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGV GR Q RSKYGAK+PK
Sbjct: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKVRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVTGRMQGRSKYGAKRPK 123
BLAST of 30s ribosomal protein s12 vs. nr
Match: gi|1200258785|gb|OUT81870.1| (30S ribosomal protein S12 [Roseibacillus sp. TMED18]) HSP 1 Score: 235.728 bits (600), Expect = 2.579e-78 Identity = 114/123 (92.68%), Postives = 121/123 (98.37%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPK 123
MPTINQLVRKGRK+AV KSKSPAL+NCPQRRGVCLQVYTRTPKKPNSALRKVAK+RLTNG+EVIAYIGGEGHNLQEHSIVL+RGGRVKDLPGVRYHIVRGSLDTLGV+ RKQSRSKYGAK+PK
Sbjct: 1 MPTINQLVRKGRKQAVRKSKSPALSNCPQRRGVCLQVYTRTPKKPNSALRKVAKVRLTNGFEVIAYIGGEGHNLQEHSIVLVRGGRVKDLPGVRYHIVRGSLDTLGVENRKQSRSKYGAKRPK 123
BLAST of 30s ribosomal protein s12 vs. nr
Match: gi|1200370780|gb|OUU89776.1| (30S ribosomal protein S12 [Verrucomicrobiaceae bacterium TMED76]) HSP 1 Score: 230.72 bits (587), Expect = 2.736e-76 Identity = 111/125 (88.80%), Postives = 118/125 (94.40%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPKAD 125
MPTINQLVR+GRK KSKSPAL+NCPQRRGVCLQVYTRTPKKPNSALRKVAK+RLTNG EVIAYIGGEGHNLQEHSIVL+RGGRVKDLPGVRYH+VRG+LDTLGVD RKQSRSKYGAK+PKA
Sbjct: 1 MPTINQLVRQGRKSPFEKSKSPALSNCPQRRGVCLQVYTRTPKKPNSALRKVAKVRLTNGQEVIAYIGGEGHNLQEHSIVLVRGGRVKDLPGVRYHVVRGALDTLGVDNRKQSRSKYGAKRPKAS 125
BLAST of 30s ribosomal protein s12 vs. nr
Match: gi|737641675|ref|WP_035611694.1| (30S ribosomal protein S12 [Haloferula sp. BvORR071]) HSP 1 Score: 228.409 bits (581), Expect = 3.693e-75 Identity = 110/123 (89.43%), Postives = 116/123 (94.31%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPK 123
MPTINQLVRKGR+ KSKSPA+ NCPQRRGVCLQV TRTPKKPNSALRKVAK+RLTNGYEVIAYIGGEGHNLQEHSIVL+RGGRVKDLPGVRYHIVRGSLDTLGVD R+QSRSKYGAK+PK
Sbjct: 1 MPTINQLVRKGRQTPTEKSKSPAMTNCPQRRGVCLQVMTRTPKKPNSALRKVAKVRLTNGYEVIAYIGGEGHNLQEHSIVLVRGGRVKDLPGVRYHIVRGSLDTLGVDKRRQSRSKYGAKRPK 123
BLAST of 30s ribosomal protein s12 vs. nr
Match: gi|1232180466|gb|OYV07082.1| (30S ribosomal protein S12 [Verrucomicrobiales bacterium VVV1]) HSP 1 Score: 226.868 bits (577), Expect = 1.642e-74 Identity = 110/123 (89.43%), Postives = 116/123 (94.31%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPK 123
MPTINQLVRKGR+ KSKSPAL NCPQRRGVCLQV TRTPKKPNSALRKVAK+RLTNG+EVIAYIGGEGHNLQEHSIVL+RGGRVKDLPGVRYHIVRGSLDTLGVD R+QSRSKYGAK+PK
Sbjct: 1 MPTINQLVRKGRQTPAEKSKSPALVNCPQRRGVCLQVMTRTPKKPNSALRKVAKVRLTNGFEVIAYIGGEGHNLQEHSIVLVRGGRVKDLPGVRYHIVRGSLDTLGVDKRRQSRSKYGAKRPK 123
BLAST of 30s ribosomal protein s12 vs. nr
Match: gi|1240606961|gb|PAW61477.1| (30S ribosomal protein S12 [Verrucomicrobiae bacterium Tous-C3TDCM] >gi|1241360553|gb|PAZ04256.1| 30S ribosomal protein S12 [Verrucomicrobiae bacterium AMD-G2]) HSP 1 Score: 226.483 bits (576), Expect = 2.283e-74 Identity = 110/123 (89.43%), Postives = 116/123 (94.31%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPK 123
MPTINQLVRKGRK V KSKSPAL NCP RRGVCLQV TRTPKKPNSALRKVAK+RLTNG+EVIAYIGGEGHNLQEHSIVL+RGGRVKDLPGVRYHIVRG+LDTLGVD R+QSRSKYGAK+PK
Sbjct: 1 MPTINQLVRKGRKTPVDKSKSPALANCPARRGVCLQVMTRTPKKPNSALRKVAKVRLTNGFEVIAYIGGEGHNLQEHSIVLVRGGRVKDLPGVRYHIVRGALDTLGVDKRRQSRSKYGAKRPK 123
BLAST of 30s ribosomal protein s12 vs. nr
Match: gi|1088666504|gb|OHE78089.1| (30S ribosomal protein S12 [Verrucomicrobia bacterium RIFCSPHIGHO2_12_FULL_41_10]) HSP 1 Score: 223.787 bits (569), Expect = 2.092e-73 Identity = 108/124 (87.10%), Postives = 118/124 (95.16%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPKA 124
MPTINQLVRKGR+K + KSKSPAL NCPQRRGVC+QV TRTPKKPNSALRKVAK+RLTNG EVIAYI GEGHNLQEHSIVL+RGGRVKDLPGVRYHIVRG+LD+LGVDGR++SRSKYGAK+PKA
Sbjct: 1 MPTINQLVRKGRRKVLVKSKSPALVNCPQRRGVCVQVMTRTPKKPNSALRKVAKVRLTNGQEVIAYIPGEGHNLQEHSIVLVRGGRVKDLPGVRYHIVRGTLDSLGVDGRRRSRSKYGAKRPKA 124
BLAST of 30s ribosomal protein s12 vs. nr
Match: gi|648601067|ref|WP_026292818.1| (30S ribosomal protein S12 [Rubritalea marina]) HSP 1 Score: 222.246 bits (565), Expect = 5.867e-73 Identity = 109/123 (88.62%), Postives = 115/123 (93.50%), Query Frame = 0
Query: 1 MPTINQLVRKGRKKAVTKSKSPALNNCPQRRGVCLQVYTRTPKKPNSALRKVAKIRLTNGYEVIAYIGGEGHNLQEHSIVLIRGGRVKDLPGVRYHIVRGSLDTLGVDGRKQSRSKYGAKKPK 123
MPTINQLVRKGRK V +SKS ALN CPQRRGVCLQV TRTPKKPNSALRKVAK+RLTNG EV+AYIGGEGHNLQEHSIVL+RGGRVKDLPGVRYHIVRG+LDTLGVDGRKQSRSKYG K+PK
Sbjct: 1 MPTINQLVRKGRKTPVEQSKSRALNACPQRRGVCLQVMTRTPKKPNSALRKVAKVRLTNGKEVMAYIGGEGHNLQEHSIVLVRGGRVKDLPGVRYHIVRGALDTLGVDGRKQSRSKYGVKRPK 123 The following BLAST results are available for this feature:
BLAST of 30s ribosomal protein s12 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 1
BLAST of 30s ribosomal protein s12 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of 30s ribosomal protein s12 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2261_size17928:8620..9000+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold2261_size17928-processed-gene-0.0 ID=snap_masked-scaffold2261_size17928-processed-gene-0.0|Name=30s ribosomal protein s12|organism=Tigriopus kingsejongensis|type=gene|length=381bp|location=Sequence derived from alignment at scaffold2261_size17928:8620..9000+ (Tigriopus kingsejongensis)back to top Synonyms
The feature '30s ribosomal protein s12' has the following synonyms
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