cytoplasmic type 5, snap_masked-scaffold228_size248166-processed-gene-1.12 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Match: EMLSAG00000008694 (supercontig:LSalAtl2s:LSalAtl2s539:269247:270712:-1 gene:EMLSAG00000008694 transcript:EMLSAT00000008694 description:"maker-LSalAtl2s539-augustus-gene-1.16") HSP 1 Score: 241.506 bits (615), Expect = 3.478e-75 Identity = 145/430 (33.72%), Postives = 228/430 (53.02%), Query Frame = 0 Query: 5 EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-RPRHVGVMV-------GMGKKDSY-IGEEAQSKRGI--LSLRYP---------IEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERG---------------------------------YSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYL----GMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAP---PERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 E ALV D G + G+AG+D P+A PS VG P H + G K G+ + + I SL YP ++ G++ NW+ E++ ++++ ++ EEHPVL +EAP N KA REK+T+IMFE +N+PA ++ A+L+ +A+GR++G+V+DSG T +P+++GY L AI++ LAG LT + L ER S+ N R +++D + + V+ DE T S+ Q YE P+G + +ERF+ PEALF P+ + V S+ CD+D+R LY +++++GG+++ G DR++++L P++M++K+I+ ER+Y WIGGSILASL +FQQMWI+K E+ E+G V RK Sbjct: 10 EXGALVFDPGHFSFRVGYAGEDCPKAEIPSFVGVAPEHEKEVSQESMEIDGTDTKPRLNTGKNGKLRYYIDTCSLHYPKKGMEISTFMKDGMIDNWEVFEELMNYSYSQIIKSKAEEHPVLFSEAPWNQKARREKLTEIMFEKYNIPAFFLAKNAILAAFANGRSSGLVLDSGATHTSAIPVHDGYVLQQAIVKSPLAGDFLTSQCKQFLDERNVEIIPPYIIASKEEVKEGDPPKWTKKKNIPDVTMSWHNYMCRNVIQDFQTSVLQVSDCSYDEETI---STIPHQSYEFPNGYNDEYESERFKIPEALFDPSIIRAPQAASMLSPAHVVTTSVGMCDIDLRPALYGSVIVTGGNSLLSGFTDRLNRDLSQKTPTNMRLKLISANGNQERRYGSWIGGSILASLGSFQQMWISKAEYQESGKVQVDRK 436
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Match: EMLSAG00000009807 (supercontig:LSalAtl2s:LSalAtl2s639:236938:238236:1 gene:EMLSAG00000009807 transcript:EMLSAT00000009807 description:"snap_masked-LSalAtl2s639-processed-gene-2.16") HSP 1 Score: 212.616 bits (540), Expect = 6.736e-65 Identity = 121/363 (33.33%), Postives = 193/363 (53.17%), Query Frame = 0 Query: 5 EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAG 367 +I LVVD G+ K G+ D P + P+IVGR RH G M+ +G KD Y+G +AQ+ RGIL+L P++ G V NWDD++ ++ + L H VLLT PL+PK + +K+ I+ E+ V +Y+ ++ L++Y GRTTG+ +DSG+ T+ VP EG +P A L L G+ +TD L++ L YSF + R+ + + A + AR S + ++E+ S+ CD +R L SNI L GG+++ PG+ +R+ KEL L PS+ +++ A R++ W GG+ L+SL++FQ++WI++ +F E+G Sbjct: 3 DIRNLVVDLGTCTTKIGWCSDSEPHMMLPTIVGRGRHKGAMLNLGLKDRYVGRQAQNLRGILNLESPLKDGSVQNWDDVQVLWEYIRDRYLGEERSAH-VLLTVPPLSPKEDWKKLGSILLESQGVAGVYLANKSALAMYGGGRTTGVCVDSGEDTTYIVPCLEGIPIPGATLVQRLGGKHVTDTLLKQLSNGKYSFIDDTFLLWKRNTSKNANHTAKN--------ARLS-VASRFEV--------------------------------------SVQLCDESLRSRLMSNIALVGGNSLLPGMDERLSKELTALFPSNFPVRVQAQKGREFFSWEGGAHLSSLNSFQELWISRSDFLESG 317
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Match: EMLSAG00000000036 (supercontig:LSalAtl2s:LSalAtl2s1006:32711:34092:-1 gene:EMLSAG00000000036 transcript:EMLSAT00000000036 description:"snap_masked-LSalAtl2s1006-processed-gene-0.20") HSP 1 Score: 122.094 bits (305), Expect = 2.741e-31 Identity = 99/396 (25.00%), Postives = 163/396 (41.16%), Query Frame = 0 Query: 8 ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRY--PIEHGIVTNWDDMEKIYHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEM--TTAARSSAITQKYELPD-----------------------GQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRKM 375 V+DNG KAGF+ PR V P+ + + + K+ +IG++ R + SL Y P + G +TNWD +KI+ + F V + ++ E N + +E + +I+ T PA +V+D G TH VP G + A LR+D+ G+ LT++L I+ R + E ++ KE C+V+ DF +M T + ++IT+ Y LPD Q + + NERF PE LF P+ DV GGST + + +R+ KE+ P + +++I P W GG+ + F + ++++EF E G + + Sbjct: 5 TFVIDNGGYFLKAGFSNQSPPRLV-PNCITKAKS-------EKRKPFIGDQINECRDLSSLYYCLPFQKGYLTNWDTQKKIWDYLFSESCCNVDTRDTNLIFMEPLFNFNSVQEGINEIITNT--DPAH----------------ACLVLDIGYSFTHIVPYIHGLRIKEATLRIDVGGKLLTNHLKEIVSYRQLHVLD--ETYVMNACKEDCCFVSLDFHADMNETLKHKGNSITRDYILPDFHNLRRGVMKSLEKSTGRPKDENEQFVRMNNERFTVPEILFNPS--------------------DV-------------GGSTKFSNMRERVEKEIREWIPDLIDVQVIHPQNPITYSWEGGAAFSEDPCFLKTCVSRKEFLERGHSVCDERF 339
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Match: EMLSAG00000002538 (supercontig:LSalAtl2s:LSalAtl2s14:70836:75333:1 gene:EMLSAG00000002538 transcript:EMLSAT00000002538 description:"maker-LSalAtl2s14-augustus-gene-0.7") HSP 1 Score: 108.997 bits (271), Expect = 2.285e-25 Identity = 93/369 (25.20%), Postives = 176/369 (47.70%), Query Frame = 0 Query: 9 LVVDNGSGMCKAGFAG--DDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSK--RGILSLRYPIEHG-----IVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAERE--IVRDIKEKLCYVATDFEDEMTT-----AARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQ 361 ++VD G +AG A P+ FPS++ + +++ Y G +A + R L +P+ ++ EKI+ ++ P E+ + L+ + ++ ++FE F + ++ + QAV S+YA TGIV+D G+ + +PI +GY + + R + GR+L + + L+ + ++ + ++ + ++R EK YVA +F+ E+ S AI + +G ERF E LF+P G++ GVH V ++ C VD+RK++ +I SGG + PG A+R+ E++ L P ++K K+ A ++ ++G A F M ++++ Sbjct: 989 IIVDFGGASVRAGIASRIPTLPKIFFPSVMA-------VAKDNEREKYFGLDAFAPEVRARCDLFHPMSFDRRTIDLIAFQGMFEKIFKDLGIDD----PAEYELQLSVPRSLDDKTKIAVSSVLFEEFAIRSLNMAHQAVFSMYAYQSKTGIVVDIGERMD-IIPIVDGYKVGSGMSRSPVGGRELRNRTAQYLQVKNHNLSTSSPVDDYVLRAALEKSAYVARNFDRELEIYEDNYDEHSQAIPYGGGG---XELILGXERFEAIEGLFKPELWGLDQAGVHVLVHKAVRECPVDVRKEVTKSIYCSGGLSSVPGFAERLELEMERLTP-NVKPKVHASLYSYHAAYLGAESHALSEGFDDMKMSRE 1341
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Match: EMLSAG00000001328 (supercontig:LSalAtl2s:LSalAtl2s1223:231177:233933:-1 gene:EMLSAG00000001328 transcript:EMLSAT00000001328 description:"maker-LSalAtl2s1223-augustus-gene-2.59") HSP 1 Score: 97.0561 bits (240), Expect = 1.375e-21 Identity = 87/366 (23.77%), Postives = 154/366 (42.08%), Query Frame = 0 Query: 5 EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVAT----------DFEDEMTTAARSSAITQKYELPDGQIIDV-GNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLA---PSSMKIKI-------IAPPERKYSVWIGGSILAS 349 E A+V+D GS K G+AG+ PR + PS P+ + G D+ + +D+ H ++ L + P++ V++ E+ + R +++F+ F V ++ ++ L+ G +G+V+D G +P+YEG + A + LA + L L ++ + ++ ++ DI + C+VA FE + + +S +T Y + ++I V G+ R E LF+ + + + +SI C +D RK L NIV GG T PG R+ KE+ L P K+KI + P + W+G SI + Sbjct: 441 EKHAVVLDVGSAYTKLGYAGEYQPRKIIPS----PK--NLFKGNKISDNEL------------------------YDEFVSFIHSLYFEHLLINPKDRRVVIVESVIGYARFRNIFARVLFKHFEVLSVLFAPSHLMPLFLLGIRSGLVLDVGYSEAELIPVYEGVPILKAWQALPLASEVVQKSLKNALDDQDDAISSW----VIEDIAVRFCFVANYKRGQEIQNAKFEGKPFQKSIASNLT--YPIKGNKVIQVSGDIRESVCEVLFEQ---DNDRLSIPTMILDSITSCSIDTRKLLAENIVFIGGCTQIPGFKSRVIKEIKDLCETEPHYSKLKIKDNFKVHMTPGGANCAAWLGASIFGA 767
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Match: EMLSAG00000003772 (supercontig:LSalAtl2s:LSalAtl2s203:384038:386282:-1 gene:EMLSAG00000003772 transcript:EMLSAT00000003772 description:"snap-LSalAtl2s203-processed-gene-3.23") HSP 1 Score: 88.5817 bits (218), Expect = 2.430e-21 Identity = 37/46 (80.43%), Postives = 43/46 (93.48%), Query Frame = 0 Query: 334 PERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRKMDPGD 379 PERKYSVWIGGSI+ASLSTFQQMWI+KQE+DE+GP IVHRK+ G+ Sbjct: 8 PERKYSVWIGGSIMASLSTFQQMWISKQEYDESGPSIVHRKLGEGE 53
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Match: EMLSAG00000009419 (supercontig:LSalAtl2s:LSalAtl2s600:263530:266051:-1 gene:EMLSAG00000009419 transcript:EMLSAT00000009419 description:"maker-LSalAtl2s600-augustus-gene-3.31") HSP 1 Score: 58.151 bits (139), Expect = 2.634e-9 Identity = 30/113 (26.55%), Postives = 55/113 (48.67%), Query Frame = 0 Query: 236 AITQKYELPDGQI----IDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGG 344 I ++ E+P + + + ER R PE LFQP+ +G E G+ ET+ + + D +++ L +NI ++G + PGI +R+ ++ + P K + W G Sbjct: 439 GIPEEQEIPTDSLEWYQLHLSTERIRAPEILFQPSIIGHEQGGISETLEFILSKFDPELQGKLVNNIFVTGSLALLPGIKERLENDIMAMRPFQSKFNVSVAKCPSLDSWYGA 551 HSP 2 Score: 56.6102 bits (135), Expect = 7.785e-9 Identity = 37/178 (20.79%), Postives = 80/178 (44.94%), Query Frame = 0 Query: 7 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGIL--SLRYPIEHGIVTNWDDMEKI----YHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTT--GIVMDSGDGVTHTVPIYEGYSLPHAI 176 +A+++DNGS C+ G++ P ++ ++V R R + + IG + S + +L+ P + +VT + E + + H N P HPV+++ +NP ++ M +++FE ++VP + + + S + + +++ H +P G H + Sbjct: 32 SAIIIDNGSYNCRMGWSTSPEPELIYRNVVARSRKEKS----KEAELQIGNDISSGETLRGGTLKSPFDRNVVTQFQTQEMLLDYGFAHLGINSQESVP--HPVVISHPIMNPNLSQNLMNELLFECYSVPKVAYFVDXLTSYHQNKDLAQDALIVSLSHHTMHFIPWISGKIAGHGL 203
BLAST of cytoplasmic type 5 vs. SwissProt
Match: gi|1703127|sp|P53506.1|ACT8_XENLA (RecName: Full=Actin, cytoplasmic type 8) HSP 1 Score: 704.131 bits (1816), Expect = 0.000e+0 Identity = 326/374 (87.17%), Postives = 354/374 (94.65%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 M ++EIAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEK CYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHRK Sbjct: 1 MAEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKPCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
BLAST of cytoplasmic type 5 vs. SwissProt
Match: gi|21263373|sp|P79818.2|ACTB_ORYLA (RecName: Full=Actin, cytoplasmic 1; AltName: Full=Beta-actin; AltName: Full=OlCA1; Contains: RecName: Full=Actin, cytoplasmic 1, N-terminally processed) HSP 1 Score: 704.131 bits (1816), Expect = 0.000e+0 Identity = 326/372 (87.63%), Postives = 354/372 (95.16%), Query Frame = 0 Query: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 DD+IAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET +NSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHRK Sbjct: 2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373
BLAST of cytoplasmic type 5 vs. SwissProt
Match: gi|1703114|sp|P53471.1|ACT2_SCHMA (RecName: Full=Actin-2) HSP 1 Score: 703.745 bits (1815), Expect = 0.000e+0 Identity = 325/374 (86.90%), Postives = 354/374 (94.65%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 M D+E+ ALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMES GVHET FNSIM+CDVDIRKDLY+N VLSGG+TM+PGIADRM KE+ LAPS+MKIKI+APPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GPGIVHRK Sbjct: 1 MADEEVQALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVGIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGVHETTFNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRK 374
BLAST of cytoplasmic type 5 vs. SwissProt
Match: gi|12644115|sp|P10987.4|ACT1_DROME (RecName: Full=Actin-5C; Flags: Precursor >gi|67462097|sp|P84184.1|ACT3B_HELAM RecName: Full=Actin-A3b, cytoplasmic; Flags: Precursor >gi|67462098|sp|P84185.1|ACT5C_ANOGA RecName: Full=Actin-5C; AltName: Full=Actin-1D, cytoplasmic; Flags: Precursor >gi|67462113|sp|P84183.1|ACT4_BOMMO RecName: Full=Actin, cytoplasmic A4; Flags: Precursor) HSP 1 Score: 703.745 bits (1815), Expect = 0.000e+0 Identity = 324/374 (86.63%), Postives = 355/374 (94.92%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGME+CG+HET +NSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHRK Sbjct: 1 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
BLAST of cytoplasmic type 5 vs. SwissProt
Match: gi|1703117|sp|P53501.1|ACT3_DROME (RecName: Full=Actin-57B; Flags: Precursor) HSP 1 Score: 703.36 bits (1814), Expect = 0.000e+0 Identity = 323/374 (86.36%), Postives = 358/374 (95.72%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 M DDE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGI+TNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIV+DSGDGV+HTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA S+++ + YELPDGQ+I +GNERFRCPE+LFQP++LGMESCG+HETV+NSIM+CDVDIRKDLY+NIV+SGG+TMYPGIADRM KE+ LAPS++KIKIIAPPERKYSVWIGGSILASLSTFQQMWI+K+E+DE+GPGIVHRK Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYANIVMSGGTTMYPGIADRMQKEITSLAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGIVHRK 374
BLAST of cytoplasmic type 5 vs. nr
Match: gi|327288208|ref|XP_003228820.1| (PREDICTED: actin, cytoplasmic type 5 [Anolis carolinensis]) HSP 1 Score: 711.064 bits (1834), Expect = 0.000e+0 Identity = 330/374 (88.24%), Postives = 355/374 (94.92%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 M DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEA+FQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGGSTMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHRK Sbjct: 1 MADDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAVFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGSTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
BLAST of cytoplasmic type 5 vs. nr
Match: gi|700387978|ref|XP_009934170.1| (PREDICTED: actin, cytoplasmic type 5 isoform X1 [Opisthocomus hoazin] >gi|677551489|gb|KFR11729.1| Actin, cytoplasmic type 5 [Opisthocomus hoazin]) HSP 1 Score: 710.679 bits (1833), Expect = 0.000e+0 Identity = 329/374 (87.97%), Postives = 356/374 (95.19%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 M D+EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EMTTAA SS++ + YELPDGQ+I +GNERFRCPEA+FQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHRK Sbjct: 1 MADEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMTTAASSSSLEKSYELPDGQVITIGNERFRCPEAIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
BLAST of cytoplasmic type 5 vs. nr
Match: gi|1083269293|ref|XP_018595388.1| (PREDICTED: actin, cytoplasmic 2 [Scleropages formosus]) HSP 1 Score: 710.294 bits (1832), Expect = 0.000e+0 Identity = 329/372 (88.44%), Postives = 355/372 (95.43%), Query Frame = 0 Query: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM+TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHRK Sbjct: 2 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 373
BLAST of cytoplasmic type 5 vs. nr
Match: gi|706122744|ref|XP_010196911.1| (PREDICTED: actin, cytoplasmic type 5 isoform X1 [Colius striatus] >gi|677062173|gb|KFP24955.1| Actin, cytoplasmic type 5 [Colius striatus]) HSP 1 Score: 710.294 bits (1832), Expect = 0.000e+0 Identity = 329/374 (87.97%), Postives = 355/374 (94.92%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 M DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEA+FQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHRK Sbjct: 1 MADDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
BLAST of cytoplasmic type 5 vs. nr
Match: gi|556965732|ref|XP_005992382.1| (PREDICTED: actin, cytoplasmic 1 [Latimeria chalumnae]) HSP 1 Score: 710.294 bits (1832), Expect = 0.000e+0 Identity = 329/374 (87.97%), Postives = 355/374 (94.92%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 M +DEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHRK Sbjct: 1 MMEDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
BLAST of cytoplasmic type 5 vs. nr
Match: gi|1227483394|pdb|5NW4|V (Chain V, Human Cytoplasmic Dynein-1 Bound To Dynactin And An N-terminal Construct Of Bicd2) HSP 1 Score: 709.909 bits (1831), Expect = 0.000e+0 Identity = 329/374 (87.97%), Postives = 355/374 (94.92%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 M D+EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHRK Sbjct: 21 MGDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 394
BLAST of cytoplasmic type 5 vs. nr
Match: gi|938060553|gb|KPP63191.1| (Actin, cytoplasmic 2-like [Scleropages formosus]) HSP 1 Score: 709.909 bits (1831), Expect = 0.000e+0 Identity = 328/372 (88.17%), Postives = 354/372 (95.16%), Query Frame = 0 Query: 3 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPV LTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM+TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHRK Sbjct: 28 DDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVXLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 399
BLAST of cytoplasmic type 5 vs. nr
Match: gi|1160114458|ref|XP_020366648.1| (actin, cytoplasmic type 5 isoform X2 [Rhincodon typus] >gi|1160114460|ref|XP_020366650.1| actin, cytoplasmic type 5 isoform X2 [Rhincodon typus] >gi|1160114462|ref|XP_020366651.1| actin, cytoplasmic type 5 isoform X2 [Rhincodon typus]) HSP 1 Score: 709.523 bits (1830), Expect = 0.000e+0 Identity = 329/374 (87.97%), Postives = 355/374 (94.92%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 M DDEIAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHRK Sbjct: 1 MADDEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
BLAST of cytoplasmic type 5 vs. nr
Match: gi|701416470|ref|XP_009999633.1| (PREDICTED: actin-like protein 9 isoform X1 [Chaetura pelagica] >gi|678116881|gb|KFU92405.1| Actin, cytoplasmic type 5 [Chaetura pelagica]) HSP 1 Score: 709.523 bits (1830), Expect = 0.000e+0 Identity = 328/374 (87.70%), Postives = 355/374 (94.92%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 M D+EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEA+FQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHRK Sbjct: 1 MLDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEAIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITSLAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374
BLAST of cytoplasmic type 5 vs. nr
Match: gi|975120048|ref|XP_015275502.1| (PREDICTED: actin, cytoplasmic type 5 [Gekko japonicus] >gi|207298859|gb|ACI23578.1| beta-actin [Acipenser transmontanus]) HSP 1 Score: 709.523 bits (1830), Expect = 0.000e+0 Identity = 329/374 (87.97%), Postives = 355/374 (94.92%), Query Frame = 0 Query: 1 MYDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHVGVMVGMGKKDSYIGEEAQSKRGILSLRYPIEHGIVTNWDDMEKIYHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVNIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYSLPHAILRVDLAGRDLTDYLMRILRERGYSFTNTAEREIVRDIKEKLCYVATDFEDEMTTAARSSAITQKYELPDGQIIDVGNERFRCPEALFQPAYLGMESCGVHETVFNSIMRCDVDIRKDLYSNIVLSGGSTMYPGIADRMHKELDHLAPSSMKIKIIAPPERKYSVWIGGSILASLSTFQQMWITKQEFDEAGPGIVHRK 374 M D+EIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH GVMVGMG+KDSY+G+EAQSKRGIL+L+YPIEHGIVTNWDDMEKI+HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYV IQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGY+LPHAILR+DLAGRDLTDYLM+IL ERGYSFT TAEREIVRDIKEKLCYVA DFE EM TAA SS++ + YELPDGQ+I +GNERFRCPEALFQP++LGMESCG+HET FNSIM+CDVDIRKDLY+N VLSGG+TMYPGIADRM KE+ LAPS+MKIKIIAPPERKYSVWIGGSILASLSTFQQMWI+KQE+DE+GP IVHRK Sbjct: 1 MADEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRK 374 The following BLAST results are available for this feature:
BLAST of cytoplasmic type 5 vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 17
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BLAST of cytoplasmic type 5 vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of cytoplasmic type 5 vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold228_size248166:210845..213145+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold228_size248166-processed-gene-1.12 ID=snap_masked-scaffold228_size248166-processed-gene-1.12|Name=cytoplasmic type 5|organism=Tigriopus kingsejongensis|type=gene|length=2301bp|location=Sequence derived from alignment at scaffold228_size248166:210845..213145+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'cytoplasmic type 5' has the following synonyms
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