transcriptional repressor ctcf, snap_masked-scaffold22_size673200-processed-gene-5.2 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000007779 (supercontig:LSalAtl2s:LSalAtl2s455:42339:47933:1 gene:EMLSAG00000007779 transcript:EMLSAT00000007779 description:"maker-LSalAtl2s455-snap-gene-0.19") HSP 1 Score: 776.163 bits (2003), Expect = 0.000e+0 Identity = 417/647 (64.45%), Postives = 462/647 (71.41%), Query Frame = 0
Query: 37 VVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQE---------------------AKAGEA----------------------------------EDGEA--GPSGVYDFDADDPGEFDDD------------------FEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESD-VMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGKNQDDVTNCFGFDEDDD 607
V+LNAGGDQ+QTV IVPSDT EVSYVLIVQ P +E K G+A E GE GP G +D D+ EF + K K LK + KRSQ V Q HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPH+CKFCE+CFTTSGELVRHVRYRHTHEKPH+C+EC Y SVELSKLKRHMRCHTGERP+QCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCE CPTTCGRKTDLRLHVQKLHTS+ PMHCKMCGK FPDRYTLKVHKKTH+GEKCFKCDLCPYSSISQRHLESHMLIHTDQKP+ CDQCDQSFRQKQLLKRHQNLYHNPNYVPP PKEKTHEC ECGRSFRHKGNLIRHMALHDPES+AQEKA+ALK GRQR+IQI++GQ VEV TG+++D+ E+D E + E ESD VM+V+S DG YVVLEVIQL G S+ + ++S K I +++ + S +AP S+ + K ++D+ CFGFD+D+D
Sbjct: 80 VMLNAGGDQYQTVTIVPSDTNPGEVSYVLIVQQPQEEERVEAELKEEEELKEEEEEEESKKGGKAFPSVSSGEKQKKKVVALSSLASLVPLAAPRVMLSECGEGSVGPVGPGVYDFDEGNEFGGSGVLESGQEGEEGGVELEXETVSXGKRKSLKVN-KRSQCVSQAHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHKCKFCESCFTTSGELVRHVRYRHTHEKPHKCSECGYKSVELSKLKRHMRCHTGERPFQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCEFCPTTCGRKTDLRLHVQKLHTSEIPMHCKMCGKMFPDRYTLKVHKKTHDGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPYLCDQCDQSFRQKQLLKRHQNLYHNPNYVPPEPKEKTHECHECGRSFRHKGNLIRHMALHDPESSAQEKALALKXGRQRRIQIIDGQQVEVLTGDEDDEVGEDDVEAVDSE-------ESDKVMSVESHDGSQYVVLEVIQL--GNSKSHSESNSSIK------IIEGKTAAIQDSNICDVSSLRAPNEEYSNLA-------------KKRNDMATCFGFDDDED 697
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000012829 (supercontig:LSalAtl2s:LSalAtl2s97:1131613:1133645:-1 gene:EMLSAG00000012829 transcript:EMLSAT00000012829 description:"maker-LSalAtl2s97-augustus-gene-11.2") HSP 1 Score: 145.591 bits (366), Expect = 2.518e-37 Identity = 70/165 (42.42%), Postives = 92/165 (55.76%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGD 295
C+YC + LL RH++ H+ ERPH C +C +GF T +SL H H+G KPH+C C CFT S L H + H EKPH+CT C S LK H HTG P++C C LK HL +H+G+KP+ CDICH +F S +L+AH H +
Sbjct: 319 CHYCGKAFDRPSLLKRHIRIHTGERPHVCDICSKGFSTSSSLNTHRRIHSGEKPHQCGVCGKCFTASSNLYYH-KMTHVKEKPHKCTMCSKSFPTPGDLKSHTYVHTGTWPFKCHICHRGFSKQTNLKNHLLLHSGDKPFSCDICHKKFALSCNLRAHLKTHEAE 482 HSP 2 Score: 124.79 bits (312), Expect = 2.129e-30 Identity = 69/169 (40.83%), Postives = 93/169 (55.03%), Query Frame = 0
Query: 244 CPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSF----RQKQLLKRHQNLYHN 408
C +C A LKRH+RIHTGE+P+ CDIC F+ S+SL HR IH+G+KP QC +C ++L H + H ++P C MC KSFP LK H H G FKC +C Q +L++H+L+H+ KPF CD C + F + LK H+ Y N
Sbjct: 319 CHYCGKAFDRPSLLKRHIRIHTGERPHVCDICSKGFSTSSSLNTHRRIHSGEKP-HQCGVCGKCFTASSNLYYH-KMTHVKEKPHKCTMCSKSFPTPGDLKSHTYVHTGTWPFKCHICHRGFSKQTNLKNHLLLHSGDKPFSCDICHKKFALSCNLRAHLKTHEAEYQN 485 HSP 3 Score: 121.709 bits (304), Expect = 2.270e-29 Identity = 62/167 (37.13%), Postives = 90/167 (53.89%), Query Frame = 0
Query: 153 EERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQ 319
E++ C C + F + L+ H+ HTG +PH C C F+TS L H R H+ EKPH+C C S L H H E+P++C C+ + P LK H +HTG P++C ICH F++ +LK H L+H+GDKP F C++C +LR H++
Sbjct: 313 EKKELPCHYCGKAFDRPSLLKRHIRIHTGERPHVCDICSKGFSTSSSLNTHRRI-HSGEKPHQCGVCGKCFTASSNLYYHKMTHVKEKPHKCTMCSKSFPTPGDLKSHTYVHTGTWPFKCHICHRGFSKQTNLKNHLLLHSGDKP-FSCDICHKKFALSCNLRAHLK 477 HSP 4 Score: 89.7373 bits (221), Expect = 4.967e-19 Identity = 47/139 (33.81%), Postives = 70/139 (50.36%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGE 267
H+C+ C+ L+ H + HS E+PH+C VC + F ++L H TH KPH+C C F T G+L H Y HT P +C C + + LK H+ H+G++P+ C C + L+ HL+ H E
Sbjct: 345 HVCDICSKGFSTSSSLNTHRRIHSGEKPHQCGVCGKCFTASSNLYYHKMTHVKEKPHKCTMCSKSFPTPGDLKSHT-YVHTGTWPFKCHICHRGFSKQTNLKNHLLLHSGDKPFSCDICHKKFALSCNLRAHLKTHEAE 482 HSP 5 Score: 65.855 bits (159), Expect = 1.577e-11 Identity = 40/114 (35.09%), Postives = 54/114 (47.37%), Query Frame = 0
Query: 330 CKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALH 443
C CGK+F LK H + H GE+ CD+C + L +H IH+ +KP QC C + F L YH +V KEK H+C C +SF G+L H +H
Sbjct: 319 CHYCGKAFDRPSLLKRHIRIHTGERPHVCDICSKGFSTSSSLNTHRRIHSGEKPHQCGVCGKCFTASSNL-----YYHKMTHV----KEKPHKCTMCSKSFPTPGDLKSHTYVH 423 HSP 6 Score: 57.3806 bits (137), Expect = 6.393e-9 Identity = 35/105 (33.33%), Postives = 49/105 (46.67%), Query Frame = 0
Query: 112 GKVLKAST-----KRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHE 211
GK AS+ K + + + H C C+ + P L H H+ P KC +C RGF +L+NH+ H+G KP C C F S L H++ THE
Sbjct: 379 GKCFTASSNLYYHKMTHVKEKPHKCTMCSKSFPTPGDLKSHTYVHTGTWPFKCHICHRGFSKQTNLKNHLLLHSGDKPFSCDICHKKFALSCNLRAHLK---THE 480
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000012553 (supercontig:LSalAtl2s:LSalAtl2s926:114223:115801:1 gene:EMLSAG00000012553 transcript:EMLSAT00000012553 description:"maker-LSalAtl2s926-augustus-gene-1.3") HSP 1 Score: 135.961 bits (341), Expect = 3.179e-35 Identity = 70/162 (43.21%), Postives = 90/162 (55.56%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIH 292
C+YC + LL+RH+++H+ ERPH C VC++GF T +SL H H+G KPH C+ C FT S L H R H EKPH+C C S LK HM H G P++C C LK HL +HTGEKP+EC +C RF ++KAH H
Sbjct: 215 CDYCGKCFDRPSLLNRHLRTHTGERPHVCDVCDKGFSTSSSLNTHRRIHSGEKPHECETCGKRFTASSNLYYH-RMTHVKEKPHKCELCQKSFPTPGDLKSHMYIHNGSWPHRCHICDRGFSKVTNLKNHLFLHTGEKPHECPVCGKRFALGCNMKAHLKTH 375 HSP 2 Score: 110.153 bits (274), Expect = 2.111e-26 Identity = 69/196 (35.20%), Postives = 90/196 (45.92%), Query Frame = 0
Query: 257 LKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEK 452
L RHLR HTGE+P+ CD+C F+ S+SL HR IH+G+K P C+ CGK F L H+ TH EK KC+LC S + L+SHM IH P +C CD+ F + LK H L+ EK HECP CG+ F N+ H+ H +T+ K
Sbjct: 228 LNRHLRTHTGERPHVCDVCDKGFSTSSSLNTHRRIHSGEK------------------------------PHECETCGKRFTASSNLYYHRMTHVKEKPHKCELCQKSFPTPGDLKSHMYIHNGSWPHRCHICDRGFSKVTNLKNHLFLHTG---------EKPHECPVCGKRFALGCNMKAHLKTHHTNNTSPSK 384 HSP 3 Score: 109.383 bits (272), Expect = 4.956e-26 Identity = 61/177 (34.46%), Postives = 92/177 (51.98%), Query Frame = 0
Query: 149 KSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSD 325
K+ S+++ C C + F + L H+ THTG +PH C C+ F+TS L H R H+ EKPH C C S L H H E+P++C C + P LK H+ IH G P+ C IC F++ +LK H +HTG+KP +C +C +++ H++ HT++
Sbjct: 205 KADSKKKMLPCDYCGKCFDRPSLLNRHLRTHTGERPHVCDVCDKGFSTSSSLNTHRRI-HSGEKPHECETCGKRFTASSNLYYHRMTHVKEKPHKCELCQKSFPTPGDLKSHMYIHNGSWPHRCHICDRGFSKVTNLKNHLFLHTGEKP-HECPVCGKRFALGCNMKAHLKTHHTNN 379 HSP 4 Score: 105.916 bits (263), Expect = 5.906e-25 Identity = 62/187 (33.16%), Postives = 86/187 (45.99%), Query Frame = 0
Query: 227 SKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVP 413
S L RH+R HTGERP+ C C + L H RIH+GEKP+EC+ C RFT S++L HR+ H +KP C++C KSFP LK H H G +C +C +L++H+ +HT +KP +C C + F +K H +H N P
Sbjct: 226 SLLNRHLRTHTGERPHVCDVCDKGFSTSSSLNTHRRIHSGEKPHECETCGKRFTASSNLYYHRMTHVKEKP------------------------------HKCELCQKSFPTPGDLKSHMYIHNGSWPHRCHICDRGFSKVTNLKNHLFLHTGEKPHECPVCGKRFALGCNMKAHLKTHHTNNTSP 382 HSP 5 Score: 66.6254 bits (161), Expect = 5.428e-12 Identity = 40/115 (34.78%), Postives = 56/115 (48.70%), Query Frame = 0
Query: 330 CKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHD 444
C CGK F L H +TH GE+ CD+C + L +H IH+ +KP +C+ C + F L YH +V KEK H+C C +SF G+L HM +H+
Sbjct: 215 CDYCGKCFDRPSLLNRHLRTHTGERPHVCDVCDKGFSTSSSLNTHRRIHSGEKPHECETCGKRFTASSNL-----YYHRMTHV----KEKPHKCELCQKSFPTPGDLKSHMYIHN 320 HSP 6 Score: 65.855 bits (159), Expect = 9.021e-12 Identity = 30/81 (37.04%), Postives = 42/81 (51.85%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHT 209
H C C + P L HM H+ PH+C +C+RGF + +L+NH+ HTG KPH C C F + H++ HT
Sbjct: 297 HKCELCQKSFPTPGDLKSHMYIHNGSWPHRCHICDRGFSKVTNLKNHLFLHTGEKPHECPVCGKRFALGCNMKAHLKTHHT 377
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000008067 (supercontig:LSalAtl2s:LSalAtl2s47:261473:266026:-1 gene:EMLSAG00000008067 transcript:EMLSAT00000008067 description:"maker-LSalAtl2s47-augustus-gene-2.33") HSP 1 Score: 141.354 bits (355), Expect = 3.428e-35 Identity = 95/283 (33.57%), Postives = 130/283 (45.94%), Query Frame = 0
Query: 128 KHMCNYCNYTTPKRYLLSRHMKSHSEERP-----------------------HK------CSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRH--THE---KPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGD-KPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHM 375
KH+C YC + L H+K+HS E P HK C+VC R + ++L+ H HTG KPH+C C+ FT +L H++ H HE K H C+ CD S L +H + H ER ++C C A LK HL H+GE+P+ C C F ++LK H IHTG+ K ++C CP T +DL++H K H+ + P C C K+F + L H TH G K F+C C S S L H
Sbjct: 348 KHVCEYCGRLYDNLHYLRIHVKTHSTEAPLFPCEECHEKFSSISALKIHQKFHKGETQFTCTVCRRTCLSKSALETHSLIHTGYKPHQCDQCDRRFTQKSQLNYHLKTVHASIHENKPKTHFCSFCDKGFFTSSALNKHTKTHNQERNFKCVECGKAFIQKAHLKTHLLQHSGERPFVCVTCGKSFFTHSNLKEHSKIHTGEKKKYYECSACPATYVNASDLKIHTLK-HSGESPFSCDFCKKTFRSKRHLGYHICTHIGMKRFQCKNCNKSFTSPSGLRQHF 629 HSP 2 Score: 136.732 bits (343), Expect = 1.038e-33 Identity = 110/356 (30.90%), Postives = 163/356 (45.79%), Query Frame = 0
Query: 126 VQKHMCNYCNYT-----TPKRYLLSRHMKSHSEE---------RPHKCSVCERGFKTLASLQNHVNTHTGTKP-HRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLR-----IHTGE-KPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEK--CFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDP-ESTAQEKAIALK 457
++ +MC YC T K++LL + +S S E H C C R + L L+ HV TH+ P C+ C F++ L H ++ H E CT C + + S L+ H HTG +P+QC C +L HL+ IH + K + C C F S++L H H ++ F+C C +K L+ H+ + H+ +RP C CGKSF LK H K H GEK ++C CP + ++ L+ H L H+ + PF CD C ++FR K+ L YH ++ K +C C +SF L +H + HD TA E A +K
Sbjct: 304 LRHNMCPYCGKTFSAASNMKKHLLIHNQQSDSNEDGKSSTEQQFKHVCEYCGRLYDNLHYLRIHVKTHSTEAPLFPCEECHEKFSSISALKIHQKF-HKGETQFTCTVCRRTCLSKSALETHSLIHTGYKPHQCDQCDRRFTQKSQLNYHLKTVHASIHENKPKTHFCSFCDKGFFTSSALNKHTKTHNQERN-FKCVECGKAFIQKAHLKTHLLQ-HSGERPFVCVTCGKSFFTHSNLKEHSKIHTGEKKKYYECSACPATYVNASDLKIHTLKHSGESPFSCDFCKKTFRSKRHLG-----YHICTHI----GMKRFQCKNCNKSFTSPSGLRQHFSHHDTCHQTASEGAYTIK 647 HSP 3 Score: 127.102 bits (318), Expect = 1.232e-30 Identity = 126/459 (27.45%), Postives = 191/459 (41.61%), Query Frame = 0
Query: 22 STRATAPSGATAENRVVLNAGGDQFQTVHIVPSDTGSNEVSYVL--IVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEF-----DDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNH-VNTH----TGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTG---ERPYQCPHCTYASPDTFKLKRHLRIH-----TGEKPYECDICHARFTQSNSLKAHRLIHT--------GDKPVFQ-----CELCPTTCGRKTDLRLHVQKLHTSDRPMH-CKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
ST A + + L GG+ I D S+E+ L ++P Q +KA G DF + +P F F ++ K+L + ++ C C + + L+ H++ H++E+P+ C +C + F + L +H +N H T TK CE C G V R+ H+KP D E + + G ++ ++C C F K HL +H G + C C F+ ++++K H LIH G Q CE C LR+HV K H+++ P+ C+ C + F LK+H+K H+GE F C +C + +S+ LE+H LIHT KP QCDQCD+ F QK L H H + P KTH C C + F L +H H+ E
Sbjct: 55 STSAFLLGSVSKSIKHALLQGGEL-----IYLPDVSSSELRIFLNKFLEP---QHSKADSKVIFSVGCLLGIDFPSSEPSVFPCPHCSKKFTLN----KLLSRHLRVVHSTNPEYQCLICLHRCRSKSELTIHVRIHTKEKPYPCHICSKFFAQTSQLNDHLINVHNESITPTKKGCSNVCEICGLKLGSRVAVRRHIKIHQKPDVKEMSDIEDEEEDEDEDDEEELLGDEEKKSFECIFC----KKRFSQKSHLSVHEQGTHQGLRHNMCPYCGKTFSAASNMKKHLLIHNQQSDSNEDGKSSTEQQFKHVCEYCGRLYDNLHYLRIHV-KTHSTEAPLFPCEECHEKFSSISALKIHQKFHKGETQFTCTVCRRTCLSKSALETHSLIHTGYKPHQCDQCDRRFTQKSQLNYHLKTVHASIHENKP---KTHFCSFCDKGFFTSSALNKHTKTHNQE 493 HSP 4 Score: 124.405 bits (311), Expect = 1.091e-29 Identity = 88/314 (28.03%), Postives = 141/314 (44.90%), Query Frame = 0
Query: 154 ERPHKCSVCERGFKTLASLQNH-VNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTH-------------EKPHRCTECDYSSVELSKLKRHMRCHTGERP-YQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTS---DRPM--HCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPES 447
++ +C C++ F + L H TH G + + C +C F+ + + +H+ + + H C C L L+ H++ H+ E P + C C LK H + H GE + C +C ++L+ H LIHTG KP QC+ C +K+ L H++ +H S ++P C C K F L H KTH E+ FKC C + I + HL++H+L H+ ++PF C C +SF LK H ++ K+K +EC C ++ + +L H H ES
Sbjct: 275 KKSFECIFCKKRFSQKSHLSVHEQGTHQGLRHNMCPYCGKTFSAASNMKKHLLIHNQQSDSNEDGKSSTEQQFKHVCEYCGRLYDNLHYLRIHVKTHSTEAPLFPCEECHEKFSSISALKIHQKFHKGETQFTCTVCRRTCLSKSALETHSLIHTGYKP-HQCDQCDRRFTQKSQLNYHLKTVHASIHENKPKTHFCSFCDKGFFTSSALNKHTKTHNQERNFKCVECGKAFIQKAHLKTHLLQHSGERPFVCVTCGKSFFTHSNLKEHSKIH-------TGEKKKYYECSACPATYVNASDLKIHTLKHSGES 580 HSP 5 Score: 75.485 bits (184), Expect = 2.344e-14 Identity = 62/224 (27.68%), Postives = 96/224 (42.86%), Query Frame = 0
Query: 242 YQCPHCTYASPDTFKLKRHLR-IHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHT-SDRPMH------CKMCGKSFPDRYTLKVHKKTHEGEKCFKC-DLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLK-----RHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQE 451
+ CPHC+ L RHLR +H+ Y+C IC R + L H IHT +KP + C +C + + L H+ +H S P C++CG R ++ H K H+ + D+ E +L ++K F+C C + F QK L HQ L HN CP CG++F N+ +H+ +H+ +S + E
Sbjct: 128 FPCPHCSKKFTLNKLLSRHLRVVHSTNPEYQCLICLHRCRSKSELTIHVRIHTKEKP-YPCHICSKFFAQTSQLNDHLINVHNESITPTKKGCSNVCEICGLKLGSRVAVRRHIKIHQKPDVKEMSDIEDEEEDEDEDDEEELLGDEEKKSFECIFCKKRFSQKSHLSVHEQGTHQGLRHN-------------MCPYCGKTFSAASNMKKHLLIHNQQSDSNE 337
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000010896 (supercontig:LSalAtl2s:LSalAtl2s726:269584:271775:1 gene:EMLSAG00000010896 transcript:EMLSAT00000010896 description:"maker-LSalAtl2s726-augustus-gene-2.17") HSP 1 Score: 129.798 bits (325), Expect = 1.549e-32 Identity = 93/304 (30.59%), Postives = 147/304 (48.36%), Query Frame = 0
Query: 134 CNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPH--CTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVH-KKTHEGEKCFKCDLCPYSSISQRHLESHM--------------LIHTDQKP-FQCDQCDQSFRQKQLLKRHQNLYHNPN---YVPPPP 416
C++++ +L RH ++H+ E+P C C + F L+ H H+G KP+ C C S L +H R HTHE+P C C Y + + S+L H+R HTG+ P+ CPH C + LKRH+RIHTGEKPY C C + T ++L++H + +QC+LC R T L+ H +K H+S + C +C + + L H +K H + C C ++ + L +H+ L + P F+C C+ F ++ L H + +P+ + PP P
Sbjct: 96 CHFSSKYPQVLLRHERTHTGEKPFSCQECGKSFSRRDKLKTHSRVHSGEKPYACAECSYRAIDSSSLQKHRRV-HTHERPFACQLCPYKAKDSSQLTVHLRSHTGDSPFICPHEGCASSFKTNSDLKRHVRIHTGEKPYTCPYCDHKVTIKSNLESHISSNHRKAGGYQCKLCNFQTDRLTFLKEH-KKSHSSTL-LKCALCDFTSTTQMALSAHVRKKHGPKHLHHCSYCDFTCRWEGALSAHVNKKHGRSAGDSKTTLTKSLCNPNFRCHLCNAGFVREDSLSSHLRQHKSPSQGIFSPPLP 396 HSP 2 Score: 118.242 bits (295), Expect = 1.261e-28 Identity = 80/244 (32.79%), Postives = 118/244 (48.36%), Query Frame = 0
Query: 200 LVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQC--ELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVH-KKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHM 440
L+RH R HT EKP C EC S KLK H R H+GE+PY C C+Y + D+ L++H R+HT E+P+ C +C + S+ L H HTGD P F C E C ++ +DL+ HV ++HT ++P C C + L+ H H ++C LC + + L+ H H+ +C CD + + L H H P ++ H C C + R +G L H+
Sbjct: 106 LLRHER-THTGEKPFSCQECGKSFSRRDKLKTHSRVHSGEKPYACAECSYRAIDSSSLQKHRRVHTHERPFACQLCPYKAKDSSQLTVHLRSHTGDSP-FICPHEGCASSFKTNSDLKRHV-RIHTGEKPYTCPYCDHKVTIKSNLESHISSNHRKAGGYQCKLCNFQTDRLTFLKEHKKSHSSTL-LKCALCDFTSTTQMALSAHVRKKHGPKHL--------HHCSYCDFTCRWEGALSAHV 337 HSP 3 Score: 98.9821 bits (245), Expect = 3.484e-22 Identity = 78/266 (29.32%), Postives = 112/266 (42.11%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTE--CDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRI-HTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKC---------------FKCDLCPYSSISQRHLESHMLIH 378
C C + +R L H + HS E+P+ C+ C +SLQ H HT +P C+ C S +L H+R HT + P C C S S LKRH+R HTGE+PY CP+C + L+ H+ H Y+C +C+ + + LK H+ H+ + +C LC T + L HV+K H HC C + L H G F+C LC + + L SH+ H
Sbjct: 121 CQECGKSFSRRDKLKTHSRVHSGEKPYACAECSYRAIDSSSLQKHRRVHTHERPFACQLCPYKAKDSSQLTVHLR-SHTGDSPFICPHEGCASSFKTNSDLKRHVRIHTGEKPYTCPYCDHKVTIKSNLESHISSNHRKAGGYQCKLCNFQTDRLTFLKEHKKSHSST--LLKCALCDFTSTTQMALSAHVRKKHGPKHLHHCSYCDFTCRWEGALSAHVNKKHGRSAGDSKTTLTKSLCNPNFRCHLCNAGFVREDSLSSHLRQH 383
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000010052 (supercontig:LSalAtl2s:LSalAtl2s662:157810:165887:1 gene:EMLSAG00000010052 transcript:EMLSAT00000010052 description:"maker-LSalAtl2s662-augustus-gene-1.19") HSP 1 Score: 129.798 bits (325), Expect = 2.347e-31 Identity = 78/258 (30.23%), Postives = 124/258 (48.06%), Query Frame = 0
Query: 156 PHKCSVCERGFKTL--ASLQNHVNTH--TGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHL-RIH-TGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYH 407
P++C ER + TL ++ H H + +K ++C C+ L H+ H P +C CDY++ L + RH + H+ +P+ C C++ + L H+ RIH E+ C +C F L H+L H+ ++ F C++C K+ L H ++HT + + C++C S R L H KTH GEK F CD+C + I + L+ H +IH+ +KPF C C +K LK H H
Sbjct: 1711 PYQCP--ERPYWTLNKTRMRFHSKMHETSDSKNYKCPMCDITIKWKQGLRAHIICNHIKGPPFKCDLCDYTNDSLQPVLRHRKSHSEIKPFACSQCSHKTKTKKLLVAHIKRIHGRDEEKLPCSLCPKHFVSQRDLDLHQLSHSTEQK-FTCDICGFKTKYKSYLMTH-SRIHTG-QTLRCQLCSFSTLRRIHLDAHIKTHTGEKNFVCDVCKKAFIEKSQLKRHSVIHSGEKPFACHICPFRSNRKDKLKNHVTKKH 1963 HSP 2 Score: 114.39 bits (285), Expect = 1.808e-26 Identity = 72/252 (28.57%), Postives = 116/252 (46.03%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSH--SEERPHKCSVCERGFKTLASLQNH-VNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTG--ERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHM 375
+ C Y T + + H K H S+ + +KC +C+ K L+ H + H P +C C+ + ++RH R H+ KP C++C + + L H++ G E C C L H H+ E+ + CDIC + + L H IHTG +C+LC + R+ L H+ K HT ++ C +C K+F ++ LK H H GEK F C +CP+ S + L++H+
Sbjct: 1712 YQCPERPYWTLNKTRMRFHSKMHETSDSKNYKCPMCDITIKWKQGLRAHIICNHIKGPPFKCDLCDYTNDSLQPVLRH-RKSHSEIKPFACSQCSHKTKTKKLLVAHIKRIHGRDEEKLPCSLCPKHFVSQRDLDLHQLSHSTEQKFTCDICGFKTKYKSYLMTHSRIHTGQ--TLRCQLCSFSTLRRIHLDAHI-KTHTGEKNFVCDVCKKAFIEKSQLKRHSVIHSGEKPFACHICPFRSNRKDKLKNHV 1959 HSP 3 Score: 108.227 bits (269), Expect = 1.387e-24 Identity = 64/229 (27.95%), Postives = 102/229 (44.54%), Query Frame = 0
Query: 127 QKHMCNYCNYTTPKRYLLSRHMK-SHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVR-----------------------------YRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSD 325
+ + C C+ T + L H+ +H + P KC +C+ +L + H +H+ KP C C T LV H++ H+ E+ C C + + S L H R HTG+ +C C++++ L H++ HTGEK + CD+C F + + LK H +IH+G+KP F C +CP RK L+ HV K H ++
Sbjct: 1740 KNYKCPMCDITIKWKQGLRAHIICNHIKGPPFKCDLCDYTNDSLQPVLRHRKSHSEIKPFACSQCSHKTKTKKLLVAHIKRIHGRDEEKLPCSLCPKHFVSQRDLDLHQLSHSTEQKFTCDICGFKTKYKSYLMTHSRIHTGQ-TLRCQLCSFSTLRRIHLDAHIKTHTGEKNFVCDVCKKAFIEKSQLKRHSVIHSGEKP-FACHICPFRSNRKDKLKNHVTKKHGNE 1966
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000009081 (supercontig:LSalAtl2s:LSalAtl2s570:200913:204341:1 gene:EMLSAG00000009081 transcript:EMLSAT00000009081 description:"maker-LSalAtl2s570-snap-gene-1.23") HSP 1 Score: 122.865 bits (307), Expect = 4.055e-31 Identity = 56/134 (41.79%), Postives = 84/134 (62.69%), Query Frame = 0
Query: 159 CSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIH 292
C +C + + ++L+ H+ TH+G +P+RC C+ F+ + L H R H+ EKP C+ C+ + S + HMR H+GERPY+C C A D+ L +HLRIH+GEKPY+C +CH +F+QS +L H IH
Sbjct: 193 CGICGKTYARPSTLKTHMRTHSGERPYRCYDCDKSFSQAANLTAHCR-THSGEKPFHCSICNRKFSQSSSVTTHMRTHSGERPYRCRMCKKAFSDSSTLTKHLRIHSGEKPYQCKLCHLKFSQSGNLXRHMRIH 325 HSP 2 Score: 108.612 bits (270), Expect = 4.042e-26 Identity = 58/153 (37.91%), Postives = 85/153 (55.56%), Query Frame = 0
Query: 113 KVLKA-STKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIH 264
K+LK S+ S K++C C T + L HM++HS ERP++C C++ F A+L H TH+G KP C C F+ S + H+R H+ E+P+RC C + + S L +H+R H+GE+PYQC C + L RH+RIH
Sbjct: 174 KILKNPSSPDSSTDNTKNVCGICGKTYARPSTLKTHMRTHSGERPYRCYDCDKSFSQAANLTAHCRTHSGEKPFHCSICNRKFSQSSSVTTHMR-THSGERPYRCRMCKKAFSDSSTLTKHLRIHSGEKPYQCKLCHLKFSQSGNLXRHMRIH 325 HSP 3 Score: 95.1301 bits (235), Expect = 1.314e-21 Identity = 46/133 (34.59%), Postives = 74/133 (55.64%), Query Frame = 0
Query: 187 CKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQ 319
C C + L H+R H+ E+P+RC +CD S + + L H R H+GE+P+ C C + + H+R H+GE+PY C +C F+ S++L H IH+G+KP +QC+LC + +L H++
Sbjct: 193 CGICGKTYARPSTLKTHMR-THSGERPYRCYDCDKSFSQAANLTAHCRTHSGEKPFHCSICNRKFSQSSSVTTHMRTHSGERPYRCRMCKKAFSDSSTLTKHLRIHSGEKP-YQCKLCHLKFSQSGNLXRHMR 323 HSP 4 Score: 93.5893 bits (231), Expect = 5.039e-21 Identity = 50/159 (31.45%), Postives = 74/159 (46.54%), Query Frame = 0
Query: 248 TYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLY 406
TYA P T LK H+R H+GE+PY C C F+Q+ +L AH H+G+K P HC +C + F ++ H +TH GE+ ++C +C + L H+ IH+ +KP+QC C F Q L RH ++
Sbjct: 199 TYARPST--LKTHMRTHSGERPYRCYDCDKSFSQAANLTAHCRTHSGEK------------------------------PFHCSICNRKFSQSSSVTTHMRTHSGERPYRCRMCKKAFSDSSTLTKHLRIHSGEKPYQCKLCHLKFSQSGNLXRHMRIH 325 HSP 5 Score: 86.2705 bits (212), Expect = 1.406e-18 Identity = 45/143 (31.47%), Postives = 69/143 (48.25%), Query Frame = 0
Query: 301 CELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALH 443
C +C T R + L+ H+ + H+ +RP C C KSF L H +TH GEK F C +C + +HM H+ ++P++C C ++F L +H ++ EK ++C C F GNL RHM +H
Sbjct: 193 CGICGKTYARPSTLKTHM-RTHSGERPYRCYDCDKSFSQAANLTAHCRTHSGEKPFHCSICNRKFSQSSSVTTHMRTHSGERPYRCRMCKKAFSDSSTLTKHLRIH---------SGEKPYQCKLCHLKFSQSGNLXRHMRIH 325 HSP 6 Score: 71.633 bits (174), Expect = 9.572e-14 Identity = 42/147 (28.57%), Postives = 67/147 (45.58%), Query Frame = 0
Query: 330 CKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALK------IGRQRKIQIVNGQ 470
C +CGK++ TLK H +TH GE+ ++C C S +L +H H+ +KPF C C++ F Q + H + E+ + C C ++F L +H+ +H E Q K LK + R +I NG+
Sbjct: 193 CGICGKTYARPSTLKTHMRTHSGERPYRCYDCDKSFSQAANLTAHCRTHSGEKPFHCSICNRKFSQSSSVTTHMRTH---------SGERPYRCRMCKKAFSDSSTLTKHLRIHSGEKPYQCKLCHLKFSQSGNLXRHMRIHAQNGR 330
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000012096 (supercontig:LSalAtl2s:LSalAtl2s867:142067:146208:1 gene:EMLSAG00000012096 transcript:EMLSAT00000012096 description:"maker-LSalAtl2s867-augustus-gene-0.23") HSP 1 Score: 127.487 bits (319), Expect = 5.374e-31 Identity = 122/453 (26.93%), Postives = 185/453 (40.84%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHC--TYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKT-HEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHM--------------ALHDPESTAQEKAIALKIGRQRKIQIVN-GQAVEVF-TGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTS 564
C CN T ++ HM+ + C CE F L +H+ +C C + EL+ H R H+ ++ +E Y+C C T+ S + ++ R H+ EKPY C +C F++ L H+ IHTG++P FQCE+C T +K++L HV H + + CK+CG F R L H K H GEK KCD C S + H ++H+ IH+ KP+ C+ C + F + H+ + +K +EC CG F K +L+ HM ++ P+ A I +I + IVN GQ V V G D+ EED VG ES Y +++V+ E + + A + S A P ++ + S EA A S
Sbjct: 242 CQLCNITFDQKKQKIDHMRKAHRPPSYPCVRCEVDFTVKKELDDHLEYTDCGLQFKCFLCSYICRKTEELIIHQRESHSPQQ-----------IEEGPSINDQFIQHDPSEYKCDQCNRTFGSKQARGIHKN-RCHSNEKPYPCTLCPKTFSRKMGLIDHQRIHTGERP-FQCEMCGATFKQKSNLASHVDGTHLNVKRHRCKICGAMFKRRRLLDYHTKAKHTGEKPHKCDHCDASFVYPDHFKAHLRIHSGDKPYGCEICHRRFASRDNRNTHRFTHST---------KKQYECSVCGLGFMRKPHLLTHMKSAGHMLDDGNAEIIINTPKLPAH--LIPNQIDTESTTSIVNPGQIVGVVEQGTDDIAVVEEDS----------VGAESV-----------YYMMDVLDGNESKVQSAIISISNAGD----PLVSSMASSNEAVATAXKS 645 HSP 2 Score: 124.405 bits (311), Expect = 6.492e-30 Identity = 70/196 (35.71%), Postives = 102/196 (52.04%), Query Frame = 0
Query: 128 KHMCNYCNYTTPKRYLLSRHM-KSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRC-HTGERPYQCPHC--TYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQ 319
++ C+ CN T + H + HS E+P+ C++C + F L +H HTG +P +C+ C A F L HV H + K HRC C L H + HTGE+P++C HC ++ PD FK HLRIH+G+KPY C+ICH RF ++ HR H+ K ++C +C RK L H++
Sbjct: 341 EYKCDQCNRTFGSKQARGIHKNRCHSNEKPYPCTLCPKTFSRKMGLIDHQRIHTGERPFQCEMCGATFKQKSNLASHVDGTHLNVKRHRCKICGAMFKRRRLLDYHTKAKHTGEKPHKCDHCDASFVYPDHFKA--HLRIHSGDKPYGCEICHRRFASRDNRNTHRFTHSTKKQ-YECSVCGLGFMRKPHLLTHMK 533 HSP 3 Score: 112.849 bits (281), Expect = 3.434e-26 Identity = 75/213 (35.21%), Postives = 101/213 (47.42%), Query Frame = 0
Query: 84 EAGPSGVYDFDADDPGEFDDD-----FEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVN-THTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHC--TYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH 288
E GPS F DP E+ D F QA+G R + + C C T ++ L H + H+ ERP +C +C FK ++L +HV+ TH K HRCK C A F L H + +HT EKPH+C CD S V K H+R H+G++PY C C +AS D R H+ +K YEC +C F + L H
Sbjct: 325 EEGPSINDQFIQHDPSEYKCDQCNRTFGSKQARG----IHKNRCHSNEKPYPCTLCPKTFSRKMGLIDHQRIHTGERPFQCEMCGATFKQKSNLASHVDGTHLNVKRHRCKICGAMFKRRRLLDYHTKAKHTGEKPHKCDHCDASFVYPDHFKAHLRIHSGDKPYGCEICHRRFASRDNRNTHRF--THSTKKQYECSVCGLGFMRKPHLLTH 531
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000001251 (supercontig:LSalAtl2s:LSalAtl2s1202:85194:88065:1 gene:EMLSAG00000001251 transcript:EMLSAT00000001251 description:"maker-LSalAtl2s1202-snap-gene-0.44") HSP 1 Score: 120.553 bits (301), Expect = 8.409e-31 Identity = 66/167 (39.52%), Postives = 97/167 (58.08%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTH---------TGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH 288
C+ C+Y T L H ++HSE++P CS CE+ FK LA L+NH+ TH + +C+ C+ F+ S L +HV+ H+ KP+ C C++S+ + LK HMR HTGE+PY+C C Y + D L+RH HTGEKP++C C QS++L+ H
Sbjct: 86 CSICDYKTFYSKNLEVHSQTHSEDKPFLCSKCEKSFKQLAQLKNHMVTHLDKEKDVVPSWYAKKKCELCDKLFSDSKCLKKHVQAVHSKLKPYICQVCNHSTSRKAMLKMHMRQHTGEKPYECDICAYKTGDHNSLRRHKYRHTGEKPHKCKFCVYSTVQSSALRRH 252 HSP 2 Score: 86.2705 bits (212), Expect = 5.498e-19 Identity = 55/167 (32.93%), Postives = 81/167 (48.50%), Query Frame = 0
Query: 244 CPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVF-------QCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRH 402
C C Y + + L+ H + H+ +KP+ C C F Q LK H + H +K V +CELC L+ HVQ +H+ +P C++C S + LK+H + H GEK ++CD+C Y + L H HT +KP +C C S Q L+RH
Sbjct: 86 CSICDYKTFYSKNLEVHSQTHSEDKPFLCSKCEKSFKQLAQLKNHMVTHLDKEKDVVPSWYAKKKCELCDKLFSDSKCLKKHVQAVHSKLKPYICQVCNHSTSRKAMLKMHMRQHTGEKPYECDICAYKTGDHNSLRRHKYRHTGEKPHKCKFCVYSTVQSSALRRH 252 HSP 3 Score: 68.5514 bits (166), Expect = 5.284e-13 Identity = 34/97 (35.05%), Postives = 53/97 (54.64%), Query Frame = 0
Query: 112 GKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRH 208
K LK + ++ ++C CN++T ++ +L HM+ H+ E+P++C +C SL+ H HTG KPH+CKFC S L RHV +H
Sbjct: 161 SKCLKKHVQAVHSKLKPYICQVCNHSTSRKAMLKMHMRQHTGEKPYECDICAYKTGDHNSLRRHKYRHTGEKPHKCKFCVYSTVQSSALRRHVTTKH 257 HSP 4 Score: 62.003 bits (149), Expect = 7.257e-11 Identity = 63/235 (26.81%), Postives = 95/235 (40.43%), Query Frame = 0
Query: 232 HMRCHTGE------RPYQCPHCTYASPDTFKLKRHLRIHTGEK------PYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPM--------HCKMCGKSFPDRYTLKVH-KKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDP 445
H+ CHT E Y C C PD F + +H + C IC + S +L+ H H+ DKP F C C + + L+ H+ ++ + C++C K F D LK H + H K + C +C +S+ + L+ HM HT +KP++CD C L+RH+ + EK H+C C S L RH+ P
Sbjct: 38 HLLCHTNELEEGSASSYSCFKC----PDIFDKWGNCALHLWKTHGIDIGLLCCSICDYKTFYSKNLEVHSQTHSEDKP-FLCSKCEKSFKQLAQLKNHMVTHLDKEKDVVPSWYAKKKCELCDKLFSDSKCLKKHVQAVHSKLKPYICQVCNHSTSRKAMLKMHMRQHTGEKPYECDICAYKTGDHNSLRRHKYRH---------TGEKPHKCKFCVYSTVQSSALRRHVTTKHP 258 HSP 5 Score: 56.6102 bits (135), Expect = 4.964e-9 Identity = 57/201 (28.36%), Postives = 84/201 (41.79%), Query Frame = 0
Query: 275 CHARFTQSNSLKAHRLIHT-----GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHC-KMCG-KSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKP---------FQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIG 459
C F+Q + + H L HT G + C CP + + LH+ K H D + C +C K+F + L+VH +TH +K F C C S L++HM+ H D++ +C+ CD+ F + LK+H H+ K K + C C S K L HM H E + A K G
Sbjct: 26 CSYTFSQKD-YETHLLCHTNELEEGSASSYSCFKCPDIFDKWGNCALHLWKTHGIDIGLLCCSICDYKTFYSK-NLEVHSQTHSEDKPFLCSKCEKSFKQLAQLKNHMVTHLDKEKDVVPSWYAKKKCELCDKLFSDSKCLKKHVQAVHS--------KLKPYICQVCNHSTSRKAMLKMHMRQHTGEKPYECDICAYKTG 216 HSP 6 Score: 54.299 bits (129), Expect = 2.820e-8 Identity = 64/222 (28.83%), Postives = 88/222 (39.64%), Query Frame = 0
Query: 245 PHCTYASPDTFKLK---RHLRIHTGE------KPYECDICHARFTQSNSLKAHRL-IHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTH-EGEKCF--------KCDLCPYSSISQRHLESHM-LIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
P+C+Y TF K HL HT E Y C C F + + H H D + C +C +L +H Q H+ D+P C C KSF LK H TH + EK KC+LC + L+ H+ +H+ KP+ C C+ S +K +LK H + EK +EC C +L RH H E
Sbjct: 24 PNCSY----TFSQKDYETHLLCHTNELEEGSASSYSCFKCPDIFDKWGNCALHLWKTHGIDIGLLCCSICDYKTFYSKNLEVHSQ-THSEDKPFLCSKCEKSFKQLAQLKNHMVTHLDKEKDVVPSWYAKKKCELCDKLFSDSKCLKKHVQAVHSKLKPYICQVCNHSTSRKAMLKMHMRQH---------TGEKPYECDICAYKTGDHNSLRRHKYRHTGE 231
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000009059 (supercontig:LSalAtl2s:LSalAtl2s568:158020:159603:-1 gene:EMLSAG00000009059 transcript:EMLSAT00000009059 description:"maker-LSalAtl2s568-snap-gene-1.72") HSP 1 Score: 121.324 bits (303), Expect = 1.693e-30 Identity = 96/303 (31.68%), Postives = 137/303 (45.21%), Query Frame = 0
Query: 38 VLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDG--QEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKV-----LKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMK-SHSEERPHKCSVCERGFKTLASLQNHVNT-HTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMR-CHTGERPYQCPHCTYASPDTFKLKRHLR-IHTGEKPYECDICHARFTQSNSLKAH-RLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPM 328
VL G QTV I S + + L P G Q AGE E G G + F D + K L+A K V+ C+YC YT + LL +H + H++ERPHKC VC F ++NH+N+ H KP C+ C T G L +HV+ H EK C C + ++ HM H E+P+ CPHC+Y S L +H+R +H EKPY+C +C F Q L H + IH + P ++C C + G +L++H + H + P+
Sbjct: 6 VLTTNGSPHQTVEIQTSPHQT-YTTVPLSGAPLAGAHQVITAGEVEFTPGGHHGA-----------EKSFACDLCEXKFFQKVHLEAHVKNVHSKVKPFKCSYCTYTCSNKGLLDKHFRVVHNKERPHKCHVCGNRFGQKIHMENHINSVHIQDKPFHCESCSYKAATKGHLEKHVKTVHNKEKRFPCEICGNRFGQKIHMQNHMMAIHKKEKPFGCPHCSYRSSTKGMLDKHVRVVHNKEKPYKCLLCANTFGQKVHLDNHVKNIHNVENP-YKCIQCEASFGTMNNLKIHSKLAHDTLVPV 295 HSP 2 Score: 110.153 bits (274), Expect = 1.235e-26 Identity = 76/247 (30.77%), Postives = 117/247 (47.37%), Query Frame = 0
Query: 179 HTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMR-CHTGERPYQCPHCTYASPDTFKLKRHLR-IHTGEKPYECDICHARFTQSNSLKAH-RLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCG-----KSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHML-IHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPP 416
H K C CE F L HV+ H+ KP +C+ C Y+ L +H R H ERP++C C ++ H+ +H +KP+ C+ C + L+ H + +H +K F CE+C G+K ++ H+ +H ++P C C K D++ VH K EK +KC LC + + HL++H+ IH + P++C QC+ SF LK H L H+ VP PP
Sbjct: 57 HGAEKSFACDLCEXKFFQKVHLEAHVKNVHSKVKPFKCSYCTYTCSNKGLLDKHFRVVHNKERPHKCHVCGNRFGQKIHMENHINSVHIQDKPFHCESCSYKAATKGHLEKHVKTVHNKEKR-FPCEICGNRFGQKIHMQNHMMAIHKKEKPFGCPHCSYRSSTKGMLDKHVRVVHNK----EKPYKCLLCANTFGQKVHLDNHVKNIHNVENPYKCIQCEASFGTMNNLKIHSKLAHD-TLVPVPP 297 HSP 3 Score: 98.5969 bits (244), Expect = 9.129e-23 Identity = 73/276 (26.45%), Postives = 122/276 (44.20%), Query Frame = 0
Query: 196 TSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMR-CHTGERPYQCPHCTYASPDTFKLKRHLRI-HTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKT-HEGEKCFKCDLCPYSSISQRHLESHML-IHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMA-LHDPESTAQEKAIALKIGRQRKIQI 466
T+GE+ H EK C C+ + L+ H++ H+ +P++C +CTY + L +H R+ H E+P++C +C RF G+K + H+ +H D+P HC+ C + L+ H KT H EK F C++C + H+++HM+ IH +KPF C C K +L +H + HN KEK ++C C +F K +L H+ +H+ E+ + G ++I
Sbjct: 45 TAGEVEFTPGGHHGAEKSFACDLCEXKFFQKVHLEAHVKNVHSKVKPFKCSYCTYTCSNKGLLDKHFRVVHNKERPHKCHVCGNRF-----------------------------GQKIHMENHINSVHIQDKPFHCESCSYKAATKGHLEKHVKTVHNKEKRFPCEICGNRFGQKIHMQNHMMAIHKKEKPFGCPHCSYRSSTKGMLDKHVRVVHN--------KEKPYKCLLCANTFGQKVHLDNHVKNIHNVENPYKCIQCEASFGTMNNLKI 283
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|134035365|sp|Q571J5.2|Z354C_MOUSE (RecName: Full=Zinc finger protein 354C; AltName: Full=Kidney, ischemia, and developmentally-regulated protein 3) HSP 1 Score: 225.328 bits (573), Expect = 1.038e-64 Identity = 132/374 (35.29%), Postives = 198/374 (52.94%), Query Frame = 0
Query: 79 EAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEK 452
E + E+ P+ + + D P +FD G+ + H+C+ C + L H + H+ E+P+KCS C + F +SL H THTG KP++C CE F +S L++H+R HT EKP+RC +C + + S L H R HTGE+ Y+C C A KL RH RIHTGEKPY+C C ++Q SL H+ +HTG++ + QC C T R + L H Q++HT +P C CGK+F + H+K H GEK + C+ C + + +L H IHT +KP+QC+QC ++F Q L H+ ++ EK ++C ECG+++ ++ NL RH +H E + K
Sbjct: 181 EGDPTESVPATYHTSEKDLPQDFDLMRSFQMYPGQ-------------KPHVCSECGKGFTQSLHLLEHKRLHTGEKPYKCSECGKSFSHRSSLLAHQRTHTGEKPYKCSECEKAFGSSSTLIKHLRV-HTGEKPYRCRQCGKAFSQCSTLTVHQRIHTGEKLYKCAECDKAFNCRAKLHRHQRIHTGEKPYKCAECGKGYSQFPSLAEHQRLHTGEQ-LCQCLQCGRTFTRVSTLIEH-QRIHTGQKPYQCNECGKTFNQYSSFNEHRKIHTGEKLYTCEECGKAFGCKSNLYRHQRIHTGEKPYQCNQCGKAFSQYSFLTEHERIHTG---------EKLYKCMECGKAYSYRSNLCRHKKVHLKERLYKWK 529 HSP 2 Score: 130.568 bits (327), Expect = 7.644e-31 Identity = 80/226 (35.40%), Postives = 118/226 (52.21%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEK 354
+ C C+ R L RH + H+ E+P+KC+ C +G+ SL H HTG + +C C FT L+ H R HT +KP++C EC + + S H + HTGE+ Y C C A L RH RIHTGEKPY+C+ C F+Q + L H IHTG+K +++C C +++L H +K+H +R K G F +L ++K +G+K
Sbjct: 330 YKCAECDKAFNCRAKLHRHQRIHTGEKPYKCAECGKGYSQFPSLAEHQRLHTGEQLCQCLQCGRTFTRVSTLIEHQRI-HTGQKPYQCNECGKTFNQYSSFNEHRKIHTGEKLYTCEECGKAFGCKSNLYRHQRIHTGEKPYQCNQCGKAFSQYSFLTEHERIHTGEK-LYKCMECGKAYSYRSNLCRH-KKVHLKERLYKWKEYGTPFIYGSSLTPYQKFLKGDK 552 HSP 3 Score: 93.5893 bits (231), Expect = 7.327e-19 Identity = 55/167 (32.93%), Postives = 81/167 (48.50%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKP 297
C C T + L H + H+ ++P++C+ C + F +S H HTG K + C+ C F L RH R HT EKP++C +C + + S L H R HTGE+ Y+C C A L RH ++H E+ Y+ F +SL ++ GDKP
Sbjct: 388 CLQCGRTFTRVSTLIEHQRIHTGQKPYQCNECGKTFNQYSSFNEHRKIHTGEKLYTCEECGKAFGCKSNLYRHQRI-HTGEKPYQCNQCGKAFSQYSFLTEHERIHTGEKLYKCMECGKAYSYRSNLCRHKKVHLKERLYKWKEYGTPFIYGSSLTPYQKFLKGDKP 553
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|81917272|sp|Q9EPU7.1|Z354C_RAT (RecName: Full=Zinc finger protein 354C; AltName: Full=Protein AJ18) HSP 1 Score: 223.402 bits (568), Expect = 5.033e-64 Identity = 124/324 (38.27%), Postives = 181/324 (55.86%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEK 452
++C+ C + L H + H+ E+P+KCS C + F +SL H THTG KP++C CE F +S L++H+R HT EKP+RC EC + + S L H R HTGE+ Y+C C A KL RH RIHTGEKPY+C C ++Q SL H+ +HTG + + QC C T R + L H Q++HT +P C CGK+F + H+K H GEK + C+ C + + +L H IHT +KP+QC+QC ++F Q L H+ ++ EK ++C ECG+++ ++ NL RH +H E + K
Sbjct: 218 YVCSECGKGFSQSLHLLEHKRIHTGEKPYKCSECGKSFSHRSSLLAHQRTHTGEKPYKCSECEKAFGSSSTLIKHLRV-HTGEKPYRCRECGKAFSQCSTLTVHQRIHTGEKLYKCAECDKAFNCRAKLHRHQRIHTGEKPYKCAECGKGYSQFPSLAEHQRLHTGGQ-LCQCLQCGRTFTRVSTLIEH-QRIHTGQKPYQCNECGKTFNQYSSFNEHRKIHTGEKLYTCEECGKAFGCKSNLYRHQRIHTGEKPYQCNQCGKAFSQYSFLTEHERIHTG---------EKLYKCMECGKAYSYRSNLCRHKKVHLKERLYKWK 529 HSP 2 Score: 180.644 bits (457), Expect = 2.742e-48 Identity = 108/320 (33.75%), Postives = 170/320 (53.12%), Query Frame = 0
Query: 120 KRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRH 439
KR + + C+ C + R L H ++H+ E+P+KCS CE+ F + ++L H+ HTG KP+RC+ C F+ L H R HT EK ++C ECD + +KL RH R HTGE+PY+C C L H R+HTG + +C C FT+ ++L H+ IHTG KP +QC C T + + H +K+HT ++ C+ CGK+F + L H++ H GEK ++C+ C + L H IHT +K ++C +C +++ + L RH+ ++ KE+ ++ E G F + +L H
Sbjct: 237 KRIHTGEKPYKCSECGKSFSHRSSLLAHQRTHTGEKPYKCSECEKAFGSSSTLIKHLRVHTGEKPYRCRECGKAFSQCSTLTVHQRI-HTGEKLYKCAECDKAFNCRAKLHRHQRIHTGEKPYKCAECGKGYSQFPSLAEHQRLHTGGQLCQCLQCGRTFTRVSTLIEHQRIHTGQKP-YQCNECGKTFNQYSSFNEH-RKIHTGEKLYTCEECGKAFGCKSNLYRHQRIHTGEKPYQCNQCGKAFSQYSFLTEHERIHTGEKLYKCMECGKAYSYRSNLCRHKKVH---------LKERLYKWKEYGTPFMYGSSLAPH 544 HSP 3 Score: 179.104 bits (453), Expect = 8.628e-48 Identity = 102/279 (36.56%), Postives = 147/279 (52.69%), Query Frame = 0
Query: 172 LQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQ 450
L + + G KP+ C C F+ S L+ H R HT EKP++C+EC S S L H R HTGE+PY+C C A + L +HLR+HTGEKPY C C F+Q ++L H+ IHTG+K +++C C + L H Q++HT ++P C CGK + +L H++ H G + +C C + L H IHT QKP+QC++C ++F Q H+ ++ EK + C ECG++F K NL RH +H E Q
Sbjct: 205 LMRNFQIYPGQKPYVCSECGKGFSQSLHLLEHKRI-HTGEKPYKCSECGKSFSHRSSLLAHQRTHTGEKPYKCSECEKAFGSSSTLIKHLRVHTGEKPYRCRECGKAFSQCSTLTVHQRIHTGEK-LYKCAECDKAFNCRAKLHRH-QRIHTGEKPYKCAECGKGYSQFPSLAEHQRLHTGGQLCQCLQCGRTFTRVSTLIEHQRIHTGQKPYQCNECGKTFNQYSSFNEHRKIHTG---------EKLYTCEECGKAFGCKSNLYRHQRIHTGEKPYQ 471 HSP 4 Score: 133.65 bits (335), Expect = 6.587e-32 Identity = 81/226 (35.84%), Postives = 118/226 (52.21%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEK 354
+ C C+ R L RH + H+ E+P+KC+ C +G+ SL H HTG + +C C FT L+ H R HT +KP++C EC + + S H + HTGE+ Y C C A L RH RIHTGEKPY+C+ C F+Q + L H IHTG+K +++C C +++L H +K+H +R K G F +L H++ +GEK
Sbjct: 330 YKCAECDKAFNCRAKLHRHQRIHTGEKPYKCAECGKGYSQFPSLAEHQRLHTGGQLCQCLQCGRTFTRVSTLIEHQRI-HTGQKPYQCNECGKTFNQYSSFNEHRKIHTGEKLYTCEECGKAFGCKSNLYRHQRIHTGEKPYQCNQCGKAFSQYSFLTEHERIHTGEK-LYKCMECGKAYSYRSNLCRH-KKVHLKERLYKWKEYGTPFMYGSSLAPHQRCLKGEK 552 HSP 5 Score: 116.316 bits (290), Expect = 3.352e-26 Identity = 71/209 (33.97%), Postives = 107/209 (51.20%), Query Frame = 0
Query: 252 PDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGR 460
P F L R+ +I+ G+KPY C C F+QS L H+ IHTG+KP ++C C + ++ L H Q+ HT ++P C C K+F TL H + H GEK ++C C + L H IHT +K ++C +CD++F + L RHQ ++ EK ++C ECG+ + +L H LH T + L+ GR
Sbjct: 200 PQDFDLMRNFQIYPGQKPYVCSECGKGFSQSLHLLEHKRIHTGEKP-YKCSECGKSFSHRSSLLAH-QRTHTGEKPYKCSECEKAFGSSSTLIKHLRVHTGEKPYRCRECGKAFSQCSTLTVHQRIHTGEKLYKCAECDKAFNCRAKLHRHQRIHTG---------EKPYKCAECGKGYSQFPSLAEHQRLH----TGGQLCQCLQCGR 393 HSP 6 Score: 93.5893 bits (231), Expect = 7.935e-19 Identity = 55/167 (32.93%), Postives = 81/167 (48.50%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKP 297
C C T + L H + H+ ++P++C+ C + F +S H HTG K + C+ C F L RH R HT EKP++C +C + + S L H R HTGE+ Y+C C A L RH ++H E+ Y+ F +SL H+ G+KP
Sbjct: 388 CLQCGRTFTRVSTLIEHQRIHTGQKPYQCNECGKTFNQYSSFNEHRKIHTGEKLYTCEECGKAFGCKSNLYRHQRI-HTGEKPYQCNQCGKAFSQYSFLTEHERIHTGEKLYKCMECGKAYSYRSNLCRHKKVHLKERLYKWKEYGTPFMYGSSLAPHQRCLKGEKP 553 HSP 7 Score: 57.3806 bits (137), Expect = 1.908e-7 Identity = 33/112 (29.46%), Postives = 53/112 (47.32%), Query Frame = 0
Query: 335 KSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
K P + L + + + G+K + C C HL H IHT +KP++C +C +SF + L HQ + EK ++C EC ++F LI+H+ +H E
Sbjct: 197 KDLPQDFDLMRNFQIYPGQKPYVCSECGKGFSQSLHLLEHKRIHTGEKPYKCSECGKSFSHRSSLLAHQRTHTG---------EKPYKCSECEKAFGSSSTLIKHLRVHTGE 299
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|134044257|sp|Q9UJW8.2|ZN180_HUMAN (RecName: Full=Zinc finger protein 180; AltName: Full=HHZ168) HSP 1 Score: 225.713 bits (574), Expect = 9.198e-64 Identity = 125/303 (41.25%), Postives = 171/303 (56.44%), Query Frame = 0
Query: 144 LSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
L+++M+++SEE+P +C+ C + F + L H THTG KP+ C C F+ S LV H R HT EKP+RC +C S + L H R HTGE+PY+C C + ++KL H R HTGEKPYEC+ C F QS L AH+ IHTG+KP ++C C + + L H Q+ HT ++P C CGKSF L H++TH GEK ++C C S HL H IHT +KP++C+QC +SF Q +L HQ + EK +EC +CG+SFR L +H H E
Sbjct: 340 LTQNMRNNSEEKPFECNQCGKSFSWSSHLVAHQRTHTGEKPYECSECGKSFSRSSHLVSHQR-THTGEKPYRCNQCGKSFSQSYVLVVHQRTHTGEKPYECNQCGKSFRQSYKLIAHQRTHTGEKPYECNQCGKSFIQSYKLIAHQRIHTGEKP-YECNQCGKSFSQSYKLVAH-QRTHTGEKPFECNQCGKSFSWSSQLVAHQRTHTGEKPYECSECGKSFNRSSHLVMHQRIHTGEKPYECNQCGKSFSQSYVLVVHQRTH---------TGEKPYECSQCGKSFRQSSCLTQHQRTHTGE 630 HSP 2 Score: 224.942 bits (572), Expect = 1.625e-63 Identity = 129/347 (37.18%), Postives = 187/347 (53.89%), Query Frame = 0
Query: 105 FEMDQAKGKVLKAST-----KRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
FE +Q GK S+ +R+ + + C+ C + + L H ++H+ E+P++C+ C + F L H THTG KP+ C C F S +L+ H R HT EKP+ C +C S ++ KL H R HTGE+PY+C C + ++KL H R HTGEKP+EC+ C F+ S+ L AH+ HTG+KP ++C C + R + L +H Q++HT ++P C CGKSF Y L VH++TH GEK ++C C S L H HT +KPF+C+QC ++F L HQ + EK C +CG++F + LIRH A H E
Sbjct: 353 FECNQC-GKSFSWSSHLVAHQRTHTGEKPYECSECGKSFSRSSHLVSHQRTHTGEKPYRCNQCGKSFSQSYVLVVHQRTHTGEKPYECNQCGKSFRQSYKLIAHQR-THTGEKPYECNQCGKSFIQSYKLIAHQRIHTGEKPYECNQCGKSFSQSYKLVAHQRTHTGEKPFECNQCGKSFSWSSQLVAHQRTHTGEKP-YECSECGKSFNRSSHLVMH-QRIHTGEKPYECNQCGKSFSQSYVLVVHQRTHTGEKPYECSQCGKSFRQSSCLTQHQRTHTGEKPFECNQCGKTFSLSARLIVHQRTH---------TGEKPFTCIQCGKAFINSYKLIRHQATHTEE 686 HSP 3 Score: 190.66 bits (483), Expect = 4.403e-51 Identity = 113/294 (38.44%), Postives = 155/294 (52.72%), Query Frame = 0
Query: 153 EERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
EE +KCS +SL ++ ++ KP C C F+ S LV H R HT EKP+ C+EC S S L H R HTGE+PY+C C + ++ L H R HTGEKPYEC+ C F QS L AH+ HTG+KP ++C C + + L H Q++HT ++P C CGKSF Y L H++TH GEK F+C+ C S L +H HT +KP++C +C +SF + L HQ ++ EK +EC +CG+SF L+ H H E
Sbjct: 325 EESQYKCSETSHS----SSLTQNMRNNSEEKPFECNQCGKSFSWSSHLVAHQR-THTGEKPYECSECGKSFSRSSHLVSHQRTHTGEKPYRCNQCGKSFSQSYVLVVHQRTHTGEKPYECNQCGKSFRQSYKLIAHQRTHTGEKP-YECNQCGKSFIQSYKLIAH-QRIHTGEKPYECNQCGKSFSQSYKLVAHQRTHTGEKPFECNQCGKSFSWSSQLVAHQRTHTGEKPYECSECGKSFNRSSHLVMHQRIH---------TGEKPYECNQCGKSFSQSYVLVVHQRTHTGE 602 HSP 4 Score: 183.726 bits (465), Expect = 1.166e-48 Identity = 102/257 (39.69%), Postives = 143/257 (55.64%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCD 387
CN C + + Y L H ++H+ E+P++C+ C + F L H HTG KP+ C C F+ S +LV H R HT EKP C +C S S+L H R HTGE+PY+C C + + L H RIHTGEKPYEC+ C F+QS L H+ HTG+KP ++C C + + + L H Q+ HT ++P C CGK+F L VH++TH GEK F C C + I+ L H HT++K ++C+
Sbjct: 439 CNQCGKSFRQSYKLIAHQRTHTGEKPYECNQCGKSFIQSYKLIAHQRIHTGEKPYECNQCGKSFSQSYKLVAHQR-THTGEKPFECNQCGKSFSWSSQLVAHQRTHTGEKPYECSECGKSFNRSSHLVMHQRIHTGEKPYECNQCGKSFSQSYVLVVHQRTHTGEKP-YECSQCGKSFRQSSCLTQH-QRTHTGEKPFECNQCGKTFSLSARLIVHQRTHTGEKPFTCIQCGKAFINSYKLIRHQATHTEEKLYECN 692 HSP 5 Score: 97.8265 bits (242), Expect = 4.923e-20 Identity = 61/174 (35.06%), Postives = 89/174 (51.15%), Query Frame = 0
Query: 105 FEMDQAKGKVLKASTK-----RSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECD 273
FE +Q GK S++ R+ + + C+ C + + L H + H+ E+P++C+ C + F L H THTG KP+ C C F S L +H R HT EKP C +C + ++L H R HTGE+P+ C C A +++KL RH HT EK YEC+
Sbjct: 521 FECNQC-GKSFSWSSQLVAHQRTHTGEKPYECSECGKSFNRSSHLVMHQRIHTGEKPYECNQCGKSFSQSYVLVVHQRTHTGEKPYECSQCGKSFRQSSCLTQHQR-THTGEKPFECNQCGKTFSLSARLIVHQRTHTGEKPFTCIQCGKAFINSYKLIRHQATHTEEKLYECN 692
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|74762345|sp|Q6NX49.1|ZN544_HUMAN (RecName: Full=Zinc finger protein 544) HSP 1 Score: 223.787 bits (569), Expect = 5.350e-63 Identity = 119/316 (37.66%), Postives = 177/316 (56.01%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
C C + + Y L H ++H+ E+P++C +C + F + L H HTG KP++C C F + L+ H R HT EKP+ CT C S + +L H R HTGE+P++C C + + L H R HTGEKPYEC++C F+QS+ L H+ IHTG+KP +QC C + ++L +H Q++HT ++P C CGKSF Y L HK+TH GEK ++C+ C + L H+ IHT +KP++C+QC+++F + L HQ + EK EC +CG++F NL+ H +H E
Sbjct: 382 CTQCGKSFSQSYDLVIHQRTHTGEKPYECDLCGKSFTQRSKLITHQRIHTGEKPYQCIECRKSFRWNSNLIVHQRI-HTGEKPYECTHCGKSFSQSYELVTHKRTHTGEKPFKCTQCGKSFSQKYDLVVHQRTHTGEKPYECNLCGKSFSQSSKLITHQRIHTGEKP-YQCIECGKSFRWNSNLVIH-QRIHTGEKPYDCTHCGKSFSQSYQLVAHKRTHTGEKPYECNECGKAFNRSTQLIRHLQIHTGEKPYKCNQCNKAFARSSYLVMHQRTH---------TGEKPFECSQCGKAFSGSSNLLSHHRIHSGE 685 HSP 2 Score: 202.986 bits (515), Expect = 2.079e-55 Identity = 117/316 (37.03%), Postives = 168/316 (53.16%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
C+ C + +R L H + H+ E+P++C C + F+ ++L H HTG KP+ C C F+ S ELV H R HT EKP +CT+C S + L H R HTGE+PY+C C + + KL H RIHTGEKPY+C C F +++L H+ IHTG+KP + C C + + L H ++ HT ++P C CGK+F L H + H GEK +KC+ C + +L H HT +KPF+C QC ++F L H ++ EK +EC +CG+SFR + L+ H H E
Sbjct: 410 CDLCGKSFTQRSKLITHQRIHTGEKPYQCIECRKSFRWNSNLIVHQRIHTGEKPYECTHCGKSFSQSYELVTHKR-THTGEKPFKCTQCGKSFSQKYDLVVHQRTHTGEKPYECNLCGKSFSQSSKLITHQRIHTGEKPYQCIECGKSFRWNSNLVIHQRIHTGEKP-YDCTHCGKSFSQSYQLVAH-KRTHTGEKPYECNECGKAFNRSTQLIRHLQIHTGEKPYKCNQCNKAFARSSYLVMHQRTHTGEKPFECSQCGKAFSGSSNLLSHHRIHSG---------EKPYECSDCGKSFRQQSQLVVHRRTHTGE 713 HSP 3 Score: 194.126 bits (492), Expect = 2.678e-52 Identity = 114/296 (38.51%), Postives = 160/296 (54.05%), Query Frame = 0
Query: 116 KASTKRSQMVVQKHM--------CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQ 403
K+ T+RS+++ + + C C + L H + H+ E+P++C+ C + F L H THTG KP +C C F+ +LV H R HT EKP+ C C S + SKL H R HTGE+PYQC C + L H RIHTGEKPY+C C F+QS L AH+ HTG+KP ++C C R T L H+Q +HT ++P C C K+F L +H++TH GEK F+C C + +L SH IH+ +KP++C C +SFRQ+ L H+
Sbjct: 415 KSFTQRSKLITHQRIHTGEKPYQCIECRKSFRWNSNLIVHQRIHTGEKPYECTHCGKSFSQSYELVTHKRTHTGEKPFKCTQCGKSFSQKYDLVVHQR-THTGEKPYECNLCGKSFSQSSKLITHQRIHTGEKPYQCIECGKSFRWNSNLVIHQRIHTGEKPYDCTHCGKSFSQSYQLVAHKRTHTGEKP-YECNECGKAFNRSTQLIRHLQ-IHTGEKPYKCNQCNKAFARSSYLVMHQRTHTGEKPFECSQCGKAFSGSSNLLSHHRIHSGEKPYECSDCGKSFRQQSQLVVHR 707 HSP 4 Score: 186.037 bits (471), Expect = 2.387e-49 Identity = 102/253 (40.32%), Postives = 137/253 (54.15%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKP 383
C +C + + Y L H ++H+ E+P KC+ C + F L H THTG KP+ C C F+ S +L+ H R HT EKP++C EC S S L H R HTGE+PY C HC + +++L H R HTGEKPYEC+ C F +S L H IHTG+KP ++C C R + L +H Q+ HT ++P C CGK+F L H + H GEK ++C C S Q L H HT +KP
Sbjct: 466 CTHCGKSFSQSYELVTHKRTHTGEKPFKCTQCGKSFSQKYDLVVHQRTHTGEKPYECNLCGKSFSQSSKLITHQRI-HTGEKPYQCIECGKSFRWNSNLVIHQRIHTGEKPYDCTHCGKSFSQSYQLVAHKRTHTGEKPYECNECGKAFNRSTQLIRHLQIHTGEKP-YKCNQCNKAFARSSYLVMH-QRTHTGEKPFECSQCGKAFSGSSNLLSHHRIHSGEKPYECSDCGKSFRQQSQLVVHRRTHTGEKP 715 HSP 5 Score: 181.415 bits (459), Expect = 8.959e-48 Identity = 118/338 (34.91%), Postives = 167/338 (49.41%), Query Frame = 0
Query: 128 KHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNL-------------------YHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
++ C+ C T + L + +S E P +C F +S + T KP C C F+ + H R HT EKP CT+C S + L H R HTGE+PY+C C + KL H RIHTGEKPY+C C F +++L H+ IHTG+KP ++C C + + +L H ++ HT ++P C CGKSF +Y L VH++TH GEK ++C+LC S L +H IHT +KP+QC +C +SFR L HQ + Y + EK +EC ECG++F LIRH+ +H E
Sbjct: 297 QYECDECRETCSESLCLVQTERSGPGETPFRCEERCAAFPMASSFSDCNIIQTTEKPSVCNQCGKSFSCCKLI--HQR-THTGEKPFECTQCGKSFSQSYDLVIHQRTHTGEKPYECDLCGKSFTQRSKLITHQRIHTGEKPYQCIECRKSFRWNSNLIVHQRIHTGEKP-YECTHCGKSFSQSYELVTH-KRTHTGEKPFKCTQCGKSFSQKYDLVVHQRTHTGEKPYECNLCGKSFSQSSKLITHQRIHTGEKPYQCIECGKSFRWNSNLVIHQRIHTGEKPYDCTHCGKSFSQSYQLVAHKRTHTGEKPYECNECGKAFNRSTQLIRHLQIHTGE 629 HSP 6 Score: 147.517 bits (371), Expect = 3.688e-36 Identity = 93/242 (38.43%), Postives = 120/242 (49.59%), Query Frame = 0
Query: 209 THEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQ 450
T EKP C +C S KL H R HTGE+P++C C + ++ L H R HTGEKPYECD+C FTQ + L H+ IHTG+KP +QC C + ++L +H Q++HT ++P C CGKSF Y L HK+TH GE KPF+C QC +SF QK L HQ + EK +EC CG+SF LI H +H E Q
Sbjct: 349 TTEKPSVCNQCG-KSFSCCKLI-HQRTHTGEKPFECTQCGKSFSQSYDLVIHQRTHTGEKPYECDLCGKSFTQRSKLITHQRIHTGEKP-YQCIECRKSFRWNSNLIVH-QRIHTGEKPYECTHCGKSFSQSYELVTHKRTHTGE----------------------------KPFKCTQCGKSFSQKYDLVVHQRTH---------TGEKPYECNLCGKSFSQSSKLITHQRIHTGEKPYQ 549 HSP 7 Score: 117.857 bits (294), Expect = 1.872e-26 Identity = 73/212 (34.43%), Postives = 106/212 (50.00%), Query Frame = 0
Query: 236 HTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTD-LRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
H G+ Y+C C ++ L + R GE P+ C+ A F ++S +I T +KP +C CG+ +L Q+ HT ++P C CGKSF Y L +H++TH GEK ++CDLC S + L +H IHT +KP+QC +C +SFR L HQ ++ EK +EC CG+SF L+ H H E
Sbjct: 292 HFGKSQYECDECRETCSESLCLVQTERSGPGETPFRCEERCAAFPMASSFSDCNIIQTTEKP----SVC-NQCGKSFSCCKLIHQRTHTGEKPFECTQCGKSFSQSYDLVIHQRTHTGEKPYECDLCGKSFTQRSKLITHQRIHTGEKPYQCIECRKSFRWNSNLIVHQRIH---------TGEKPYECTHCGKSFSQSYELVTHKRTHTGE 489 HSP 8 Score: 62.7734 bits (151), Expect = 5.538e-9 Identity = 69/246 (28.05%), Postives = 103/246 (41.87%), Query Frame = 0
Query: 210 HEKPHRCTECDYSSVELSKLKRHMRCHTGER-PYQCPHCTYASPDTFK----LKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQ 450
H + H+C S+ LSKL TG++ PY+ S D+ L H R + +K +C F+ S SL + +H G K ++C+ C TC L + ++ + P C+ +FP + EK C+ C S + + H HT +KPF+C QC +SF Q L HQ + EK +EC CG+SF + LI H +H E Q
Sbjct: 212 HCESHQCARAFCQSIYLSKLGN---VETGKKNPYE----YIVSGDSLNYGSSLCFHGRTFSVKKSDDCKDYGNLFSHSVSLNEQKPVHFG-KSQYECDECRETCSESLCL-VQTERSGPGETPFRCEERCAAFPMASSFSDCNIIQTTEKPSVCNQCGKSFSCCKLI--HQRTHTGEKPFECTQCGKSFSQSYDLVIHQRTH---------TGEKPYECDLCGKSFTQRSKLITHQRIHTGEKPYQ 437
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|74756138|sp|Q5SXM1.1|ZN678_HUMAN (RecName: Full=Zinc finger protein 678) HSP 1 Score: 219.55 bits (558), Expect = 6.750e-63 Identity = 127/353 (35.98%), Postives = 195/353 (55.24%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDED 481
+ C+ C+ L+ H K HS E+P+ C C + F ++L H HTG KP++CK C F L +H R HT EKP++C EC E S L RH R HTGE+PY+C C A L RH RIHTGEKPY+C+ C F + + L +H+ IHTG+KP ++CE C T + ++L H +++HT ++P CK CGK+F +L H++ H G K +KC+ C HL SH IHT +KP++C +C ++F Q +L +H+ ++ +EK ++C ECG++F +L RH +H T +++ + G+ ++ + ++TGE+ D
Sbjct: 181 YKCDECDKVFNWWSQLTSHKKIHSGEKPYPCEECGKAFTQFSNLTQHKRIHTGEKPYKCKECCKAFNKFSNLTQHKRI-HTGEKPYKCEECGNVFNECSHLTRHRRIHTGEKPYKCEECGKAFTQFASLTRHKRIHTGEKPYQCEECGKTFNRCSHLSSHKRIHTGEKP-YKCEECGRTFTQFSNLTQH-KRIHTGEKPYKCKECGKAFNKFSSLTQHRRIHTGVKPYKCEECGKVFKQCSHLTSHKRIHTGEKPYKCKECGKAFYQSSILSKHKRIH---------TEEKPYKCEECGKAFNQFSSLTRHKRIH----TGEKRYKCKECGKGFYQSSIHSKYKRIYTGEEPD 517 HSP 2 Score: 199.904 bits (507), Expect = 1.167e-55 Identity = 119/358 (33.24%), Postives = 191/358 (53.35%), Query Frame = 0
Query: 92 DFDADDPGEFDDDFEMDQAKG------KVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALH 443
+ D+ D +++ KG ++ + S+ +S++ C C R +L+ H + H+ E+P+KC C + F ++L H HTG KP++C C F +L H + HT EKP++C ECD S+L H + H+GE+PY C C A L +H RIHTGEKPY+C C F + ++L H+ IHTG+KP ++CE C + L H +++HT ++P C+ CGK+F +L HK+ H GEK ++C+ C + HL SH IHT +KP++C++C ++F Q L +H+ ++ EK ++C ECG++F +L +H +H
Sbjct: 58 SWGLDNLHLVKDWRTVNEGKGQKEYCNRLTQCSSTKSKIF----QCIECGRNFSWRSILTEHKRIHTGEKPYKCEECGKVFNRCSNLTKHKRIHTGEKPYKCDECGKVFNWWSQLTNHKKI-HTGEKPYKCDECDKVFNWWSQLTSHKKIHSGEKPYPCEECGKAFTQFSNLTQHKRIHTGEKPYKCKECCKAFNKFSNLTQHKRIHTGEKP-YKCEECGNVFNECSHLTRH-RRIHTGEKPYKCEECGKAFTQFASLTRHKRIHTGEKPYQCEECGKTFNRCSHLSSHKRIHTGEKPYKCEECGRTFTQFSNLTQHKRIH---------TGEKPYKCKECGKAFNKFSSLTQHRRIH 399 HSP 3 Score: 179.874 bits (455), Expect = 2.391e-48 Identity = 105/297 (35.35%), Postives = 161/297 (54.21%), Query Frame = 0
Query: 150 SHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
S ++ + +C C R F + L H HTG KP++C+ C F L +H R HT EKP++C EC S+L H + HTGE+PY+C C +L H +IH+GEKPY C+ C FTQ ++L H+ IHTG+KP ++C+ C + ++L H +++HT ++P C+ CG F + L H++ H GEK +KC+ C + L H IHT +KP+QC++C ++F + L H+ ++ EK ++C ECGR+F NL +H +H E
Sbjct: 90 SSTKSKIFQCIECGRNFSWRSILTEHKRIHTGEKPYKCEECGKVFNRCSNLTKHKRI-HTGEKPYKCDECGKVFNWWSQLTNHKKIHTGEKPYKCDECDKVFNWWSQLTSHKKIHSGEKPYPCEECGKAFTQFSNLTQHKRIHTGEKP-YKCKECCKAFNKFSNLTQH-KRIHTGEKPYKCEECGNVFNECSHLTRHRRIHTGEKPYKCEECGKAFTQFASLTRHKRIHTGEKPYQCEECGKTFNRCSHLSSHKRIH---------TGEKPYKCEECGRTFTQFSNLTQHKRIHTGE 374 HSP 4 Score: 167.933 bits (424), Expect = 4.207e-44 Identity = 95/246 (38.62%), Postives = 139/246 (56.50%), Query Frame = 0
Query: 144 LSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQC 389
L+RH + H+ E+P+KC C + F ASL H HTG KP++C+ C F L H R HT EKP++C EC + + S L +H R HTGE+PY+C C A L +H RIHTG KPY+C+ C F Q + L +H+ IHTG+KP ++C+ C + + L H +++HT ++P C+ CGK+F +L HK+ H GEK +KC C + I+T ++P +C +C
Sbjct: 280 LTRHRRIHTGEKPYKCEECGKAFTQFASLTRHKRIHTGEKPYQCEECGKTFNRCSHLSSHKRI-HTGEKPYKCEECGRTFTQFSNLTQHKRIHTGEKPYKCKECGKAFNKFSSLTQHRRIHTGVKPYKCEECGKVFKQCSHLTSHKRIHTGEKP-YKCKECGKAFYQSSILSKH-KRIHTEEKPYKCEECGKAFNQFSSLTRHKRIHTGEKRYKCKECGKGFYQSSIHSKYKRIYTGEEPDKCKKC 522 HSP 5 Score: 148.288 bits (373), Expect = 3.865e-37 Identity = 88/242 (36.36%), Postives = 127/242 (52.48%), Query Frame = 0
Query: 209 THEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQ 450
T K +C EC + S L H R HTGE+PY+C C L +H RIHTGEKPY+CD C F + L H+ IHTG+KP ++C+ C + L H +K+H+ ++P C+ CGK+F L HK+ H GEK +KC C + +L H IHT +KP++C++C F + L RH+ ++ EK ++C ECG++F +L RH +H E Q
Sbjct: 92 TKSKIFQCIECGRNFSWRSILTEHKRIHTGEKPYKCEECGKVFNRCSNLTKHKRIHTGEKPYKCDECGKVFNWWSQLTNHKKIHTGEKP-YKCDECDKVFNWWSQLTSH-KKIHSGEKPYPCEECGKAFTQFSNLTQHKRIHTGEKPYKCKECCKAFNKFSNLTQHKRIHTGEKPYKCEECGNVFNECSHLTRHRRIH---------TGEKPYKCEECGKAFTQFASLTRHKRIHTGEKPYQ 322 HSP 6 Score: 130.954 bits (328), Expect = 3.345e-31 Identity = 79/209 (37.80%), Postives = 114/209 (54.55%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGR---KTDLRLHVQKLHTSDRPMHCKMCG 334
+ C C T + LS H + H+ E+P+KC C R F ++L H HTG KP++CK C F L +H R HT KP++C EC + S L H R HTGE+PY+C C A + L +H RIHT EKPY+C+ C F Q +SL H+ IHTG+K ++C+ CG+ ++ + ++++T + P CK CG
Sbjct: 321 YQCEECGKTFNRCSHLSSHKRIHTGEKPYKCEECGRTFTQFSNLTQHKRIHTGEKPYKCKECGKAFNKFSSLTQHRRI-HTGVKPYKCEECGKVFKQCSHLTSHKRIHTGEKPYKCKECGKAFYQSSILSKHKRIHTEEKPYKCEECGKAFNQFSSLTRHKRIHTGEKR-YKCK----ECGKGFYQSSIHSKYKRIYTGEEPDKCKKCG 523 HSP 7 Score: 118.627 bits (296), Expect = 4.497e-27 Identity = 69/181 (38.12%), Postives = 98/181 (54.14%), Query Frame = 0
Query: 117 ASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKP 297
+S KR + + C C T + L++H + H+ E+P+KC C + F +SL H HTG KP++C+ C F L H R HT EKP++C EC + + S L +H R HT E+PY+C C A L RH RIHTGEK Y+C C F QS+ ++ I+TG++P
Sbjct: 337 SSHKRIHTGEKPYKCEECGRTFTQFSNLTQHKRIHTGEKPYKCKECGKAFNKFSSLTQHRRIHTGVKPYKCEECGKVFKQCSHLTSHKRI-HTGEKPYKCKECGKAFYQSSILSKHKRIHTEEKPYKCEECGKAFNQFSSLTRHKRIHTGEKRYKCKECGKGFYQSSIHSKYKRIYTGEEP 516
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|172046146|sp|Q6ZNA1.2|ZN836_HUMAN (RecName: Full=Zinc finger protein 836) HSP 1 Score: 226.098 bits (575), Expect = 1.216e-62 Identity = 130/345 (37.68%), Postives = 192/345 (55.65%), Query Frame = 0
Query: 107 MDQAKGKVLKASTK--RSQMV---VQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
M + GK + S+ QMV + + CN C + LL+ H H+ +P++C VC + F+ + L NH +HTG KP++C C F+ S L H R HT EKP++C EC + + S L H HTGE+PYQC C L H RIHTGEKPY+C+IC F+QS++L H+ +H+G+KP ++C+ C T R + L H Q +HT ++P C +C K F R L H+++H GEK +KC+ C HL H IHT +KP++CD+C ++F+Q LL RH+ ++ +EK ++C ECG+ F L+RH+ +H E
Sbjct: 219 MCKGCGKAFRVSSSLINHQMVHTTEKPYKCNECGKAFHRGSLLTIHQIVHTRGKPYQCGVCGKIFRQNSDLVNHRRSHTGEKPYKCNECGKSFSQSYNLAIHQRI-HTGEKPYKCNECGKTFKQGSCLTTHQIIHTGEKPYQCDICGKVFRQNSNLVNHQRIHTGEKPYKCNICGKSFSQSSNLATHQTVHSGNKP-YKCDECGKTFKRSSSLTTH-QIIHTGEKPYTCDVCDKVFSQRSQLARHQRSHTGEKPYKCNECGKVFSQTSHLVGHRRIHTGEKPYKCDKCGKAFKQGSLLTRHKIIH---------TREKRYQCGECGKVFSENSCLVRHLRIHTGE 551 HSP 2 Score: 206.068 bits (523), Expect = 1.476e-55 Identity = 113/298 (37.92%), Postives = 163/298 (54.70%), Query Frame = 0
Query: 149 KSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
K+H E+P+ C C + F+ +SL NH HT KP++C C F L H + HT KP++C C + S L H R HTGE+PY+C C + ++ L H RIHTGEKPY+C+ C F Q + L H++IHTG+KP +QC++C + ++L H Q++HT ++P C +CGKSF L H+ H G K +KCD C + L +H +IHT +KP+ CD CD+ F Q+ L RHQ + EK ++C ECG+ F +L+ H +H E
Sbjct: 210 KTHIREKPYMCKGCGKAFRVSSSLINHQMVHTTEKPYKCNECGKAFHRGSLLTIH-QIVHTRGKPYQCGVCGKIFRQNSDLVNHRRSHTGEKPYKCNECGKSFSQSYNLAIHQRIHTGEKPYKCNECGKTFKQGSCLTTHQIIHTGEKP-YQCDICGKVFRQNSNLVNH-QRIHTGEKPYKCNICGKSFSQSSNLATHQTVHSGNKPYKCDECGKTFKRSSSLTTHQIIHTGEKPYTCDVCDKVFSQRSQLARHQRSH---------TGEKPYKCNECGKVFSQTSHLVGHRRIHTGE 495 HSP 3 Score: 205.297 bits (521), Expect = 2.681e-55 Identity = 123/337 (36.50%), Postives = 175/337 (51.93%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLY-----HNPN--------------YVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
+ C+ C T + L+ H H+ E+P+ C VC++ F + L H +HTG KP++C C F+ + LV H R HT EKP++C +C + + S L RH HT E+ YQC C + L RHLRIHTGE+PY+C++C F S +L H+ IHTG+KP FQC C T + L H+ ++HT +P C +CGK F D L HK+ H GEK F+C+ C L H IHT +KP++C+ C +++ Q+ L +H ++ +N N Y P EK H+C CGR+F H L H H E
Sbjct: 414 YKCDECGKTFKRSSSLTTHQIIHTGEKPYTCDVCDKVFSQRSQLARHQRSHTGEKPYKCNECGKVFSQTSHLVGHRRI-HTGEKPYKCDKCGKAFKQGSLLTRHKIIHTREKRYQCGECGKVFSENSCLVRHLRIHTGEQPYKCNVCGKVFNYSGNLSIHKRIHTGEKP-FQCNECGTVFRNYSCLARHL-RIHTGQKPYKCNVCGKVFNDSGNLSNHKRIHTGEKPFQCNECGKVFSYYSCLARHRKIHTGEKPYKCNDCGKAYTQRSSLTKHLIIHTGEKPYNCNEFGGAFIQSSKLARYHRNPTGEKPHKCSHCGRTFSHITGLTYHQRRHTGE 747 HSP 4 Score: 192.586 bits (488), Expect = 6.689e-51 Identity = 108/273 (39.56%), Postives = 152/273 (55.68%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQ 403
CN C L+RH K H+ E+P+KC+ C + + +SL H+ HTG KP+ C F S +L R+ R T EKPH+C+ C + ++ L H R HTGE PY+C C T L RH RIHTGEKPY+C+ C F ++L HR IHTG+KP + C C ++ L H QK+HT D+P C CGK+F +R L H++ H GEK +KC C + L H +IH+ +KP++C++C +SF + L +HQ
Sbjct: 640 CNECGKVFSYYSCLARHRKIHTGEKPYKCNDCGKAYTQRSSLTKHLIIHTGEKPYNCNEFGGAFIQSSKLARYHR-NPTGEKPHKCSHCGRTFSHITGLTYHQRRHTGEMPYKCIECGQVFNSTSNLARHRRIHTGEKPYKCNECGKVFRHQSTLARHRSIHTGEKP-YVCNECGKAFRVRSILVNH-QKMHTGDKPYKCNECGKAFIERSKLVYHQRNHTGEKPYKCIECGKAFGRFSCLNKHQMIHSGEKPYKCNECGKSFISRSGLTKHQ 909 HSP 5 Score: 192.586 bits (488), Expect = 6.948e-51 Identity = 116/347 (33.43%), Postives = 168/347 (48.41%), Query Frame = 0
Query: 127 QKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPV---------------------------FQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
+++ C C + L RH++ H+ E+P+KC+VC + F +L H HTG KP +C C F L RH+R HT +KP++C C + L H R HTGE+P+QC C L RH +IHTGEKPY+C+ C +TQ +SL H +IHTG+KP +C C T T L H Q+ HT + P C CG+ F L H++ H GEK +KC+ C Q L H IHT +KP+ C++C ++FR + +L HQ ++ +K ++C ECG++F + L+ H H E
Sbjct: 524 KRYQCGECGKVFSENSCLVRHLRIHTGEQPYKCNVCGKVFNYSGNLSIHKRIHTGEKPFQCNECGTVFRNYSCLARHLRI-HTGQKPYKCNVCGKVFNDSGNLSNHKRIHTGEKPFQCNECGKVFSYYSCLARHRKIHTGEKPYKCNDCGKAYTQRSSLTKHLIIHTGEKPYNCNEFGGAFIQSSKLARYHRNPTGEKPHKCSHCGRTFSHITGLTYH-QRRHTGEMPYKCIECGQVFNSTSNLARHRRIHTGEKPYKCNECGKVFRHQSTLARHRSIHTGEKPYVCNECGKAFRVRSILVNHQKMH---------TGDKPYKCNECGKAFIERSKLVYHQRNHTGE 859 HSP 6 Score: 190.66 bits (483), Expect = 2.772e-50 Identity = 116/345 (33.62%), Postives = 172/345 (49.86%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPY----------------------------QCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPES 447
CN C L+RH++ H+ ++P+KC+VC + F +L NH HTG KP +C C F+ L RH R HT EKP++C +C + + S L +H+ HTGE+PY +C HC L H R HTGE PY+C C F +++L HR IHTG+KP ++C C ++ L H + +HT ++P C CGK+F R L H+K H G+K +KC+ C + I + L H HT +KP++C +C ++F + L +HQ ++ EK ++C ECG+SF + L +H H ES
Sbjct: 584 CNECGTVFRNYSCLARHLRIHTGQKPYKCNVCGKVFNDSGNLSNHKRIHTGEKPFQCNECGKVFSYYSCLARH-RKIHTGEKPYKCNDCGKAYTQRSSLTKHLIIHTGEKPYNCNEFGGAFIQSSKLARYHRNPTGEKPHKCSHCGRTFSHITGLTYHQRRHTGEMPYKCIECGQVFNSTSNLARHRRIHTGEKP-YKCNECGKVFRHQSTLARH-RSIHTGEKPYVCNECGKAFRVRSILVNHQKMHTGDKPYKCNECGKAFIERSKLVYHQRNHTGEKPYKCIECGKAFGRFSCLNKHQMIH---------SGEKPYKCNECGKSFISRSGLTKHQTKHTAES 916 HSP 7 Score: 188.734 bits (478), Expect = 1.113e-49 Identity = 113/343 (32.94%), Postives = 172/343 (50.15%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCK----------------------------MCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALH 443
+ C+ C + LL+RH H+ E+ ++C C + F + L H+ HTG +P++C C F SG L H R HT EKP +C EC S L RH+R HTG++PY+C C D+ L H RIHTGEKP++C+ C F+ + L HR IHTG+KP ++C C +++ L H+ +HT ++P +C CG++F L H++ H GE +KC C S +L H IHT +KP++C++C + FR + L RH++++ EK + C ECG++FR + L+ H +H
Sbjct: 498 YKCDKCGKAFKQGSLLTRHKIIHTREKRYQCGECGKVFSENSCLVRHLRIHTGEQPYKCNVCGKVFNYSGNLSIHKRI-HTGEKPFQCNECGTVFRNYSCLARHLRIHTGQKPYKCNVCGKVFNDSGNLSNHKRIHTGEKPFQCNECGKVFSYYSCLARHRKIHTGEKP-YKCNDCGKAYTQRSSLTKHLI-IHTGEKPYNCNEFGGAFIQSSKLARYHRNPTGEKPHKCSHCGRTFSHITGLTYHQRRHTGEMPYKCIECGQVFNSTSNLARHRRIHTGEKPYKCNECGKVFRHQSTLARHRSIH---------TGEKPYVCNECGKAFRVRSILVNHQKMH 828 HSP 8 Score: 87.8113 bits (216), Expect = 9.252e-17 Identity = 67/217 (30.88%), Postives = 99/217 (45.62%), Query Frame = 0
Query: 262 RIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGE 478
+ H EKPY C C F S+SL H+++HT +KP ++C C R + L +H Q +HT +P C +CGK F L H+++H GE KP++C++C +SF Q L HQ ++ EK ++C ECG++F+ L H +H E Q I K+ RQ +VN Q + TGE
Sbjct: 210 KTHIREKPYMCKGCGKAFRVSSSLINHQMVHTTEKP-YKCNECGKAFHRGSLLTIH-QIVHTRGKPYQCGVCGKIFRQNSDLVNHRRSHTGE----------------------------KPYKCNECGKSFSQSYNLAIHQRIH---------TGEKPYKCNECGKTFKQGSCLTTHQIIHTGEKPYQ-CDICGKVFRQNS-NLVNHQRIH--TGE 383
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|94730445|sp|P51523.2|ZNF84_HUMAN (RecName: Full=Zinc finger protein 84; AltName: Full=Zinc finger protein HPF2) HSP 1 Score: 223.016 bits (567), Expect = 1.492e-62 Identity = 137/375 (36.53%), Postives = 199/375 (53.07%), Query Frame = 0
Query: 116 KASTKRSQMVVQKHM--------CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPES----TAQEKAIALKIGRQRKIQIVNGQAVEVFTGE 478
KA +++SQ+V C+ C ++ L RH H+ E+P++CS C + F+ +SL NH THTG KPH C C F+ L+ H + HT EKP C++C + S+L RH R HTGE+PY+C C A + L H RIHTGEKPY C C F Q + L +H+ HTG+KP ++C C G K+ L H Q+ HT ++P C+ C K+F + L H++ H GEK ++C LC + + L H+ HT +KP++C++C ++FR+K L HQ ++ EK EC ECG++F K +LI H H E + KA + +K Q+VN Q + TGE
Sbjct: 354 KAFSRKSQLVTHHRTHTGTKPFGCSDCRKAFFEKSELIRHQTIHTGEKPYECSECRKAFRERSSLINHQRTHTGEKPHGCIQCGKAFSQKSHLISH-QMTHTGEKPFICSKCGKAFSRKSQLVRHQRTHTGEKPYECSECGKAFSEKLSLTNHQRIHTGEKPYVCSECGKAFCQKSHLISHQRTHTGEKP-YECSECGKAFGEKSSLATH-QRTHTGEKPYECRDCEKAFSQKSQLNTHQRIHTGEKPYECSLCRKAFFEKSELIRHLRTHTGEKPYECNECRKAFREKSSLINHQRIH---------TGEKPFECSECGKAFSRKSHLIPHQRTHTGEKPYGCSECRKAFS------QKSQLVNHQRIH--TGE 708 HSP 2 Score: 199.134 bits (505), Expect = 7.409e-54 Identity = 109/274 (39.78%), Postives = 153/274 (55.84%), Query Frame = 0
Query: 130 MCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQ 403
+C+ C ++ L RH ++H+ E+P++CS C + F SL NH HTG KP+ C C F L+ H R HT EKP+ C+EC + E S L H R HTGE+PY+C C A +L H RIHTGEKPYEC +C F + + L H HTG+KP ++C C K+ L H Q++HT ++P C CGK+F + L H++TH GEK + C C + + L +H IHT +KP++C +C ++F QK L HQ
Sbjct: 460 ICSKCGKAFSRKSQLVRHQRTHTGEKPYECSECGKAFSEKLSLTNHQRIHTGEKPYVCSECGKAFCQKSHLISHQR-THTGEKPYECSECGKAFGEKSSLATHQRTHTGEKPYECRDCEKAFSQKSQLNTHQRIHTGEKPYECSLCRKAFFEKSELIRHLRTHTGEKP-YECNECRKAFREKSSLINH-QRIHTGEKPFECSECGKAFSRKSHLIPHQRTHTGEKPYGCSECRKAFSQKSQLVNHQRIHTGEKPYRCIECGKAFSQKSQLINHQ 730 HSP 3 Score: 174.481 bits (441), Expect = 2.985e-45 Identity = 123/388 (31.70%), Postives = 184/388 (47.42%), Query Frame = 0
Query: 87 PSGVY-DFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDL----RLHV-----------------------QKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
P G Y ++DD FD+ F L + + + ++ + C+ + K ++ H ++ E+ ++CS C + F SL H + H C C F + + H R HT EKP+ C++C + + S+L H R HTGE+PY+C C A L H R HTGEKPY C+ C F++ ++L H+ IHTG+KP F+C C RK+ L R H Q +HT ++P C C K+F +R +L H++TH GEK C C + + HL SH + HT +KPF C +C ++F +K L RHQ + EK +EC ECG++F K +L H +H E
Sbjct: 146 PKGDYGKAESDDFNVFDNFF---------LHSKPEDTDTWLKYYDCDKYKESYKKSQIIIYH-RNRLGEKLYECSECRKRFSKKPSLIKHQSRHIRDIAFGCGNCGKTFPQKSQFITHHR-THTGEKPYNCSQCGKAFSQKSQLTSHQRTHTGEKPYECGECGKAFSRKSHLISHWRTHTGEKPYGCNECGRAFSEKSNLINHQRIHTGEKP-FECRECGKAFSRKSQLVTHHRTHTGTKPFGCSDCRKAFFEKSELIRHQTIHTGEKPYECSECRKAFRERSSLINHQRTHTGEKPHGCIQCGKAFSQKSHLISHQMTHTGEKPFICSKCGKAFSRKSQLVRHQRTH---------TGEKPYECSECGKAFSEKLSLTNHQRIHTGE 512 HSP 4 Score: 172.555 bits (436), Expect = 1.423e-44 Identity = 104/278 (37.41%), Postives = 152/278 (54.68%), Query Frame = 0
Query: 113 KVLKASTKRSQMVVQK--------HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQK 382
K KA +++SQ+V + + C+ C ++ L+ H + H+ E+P+ CS C + F + L +H THTG KP+ C C F L H R HT EKP+ C +C+ + + S+L H R HTGE+PY+C C A + +L RHLR HTGEKPYEC+ C F + +SL H+ IHTG+KP F+C C RK+ L H Q+ HT ++P C C K+F + L H++ H GEK ++C C + + L +H HT +K
Sbjct: 463 KCGKAFSRKSQLVRHQRTHTGEKPYECSECGKAFSEKLSLTNHQRIHTGEKPYVCSECGKAFCQKSHLISHQRTHTGEKPYECSECGKAFGEKSSLATHQR-THTGEKPYECRDCEKAFSQKSQLNTHQRIHTGEKPYECSLCRKAFFEKSELIRHLRTHTGEKPYECNECRKAFREKSSLINHQRIHTGEKP-FECSECGKAFSRKSHLIPH-QRTHTGEKPYGCSECRKAFSQKSQLVNHQRIHTGEKPYRCIECGKAFSQKSQLINHQRTHTVKK 737
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|586946340|sp|E9QAG8.1|ZN431_MOUSE (RecName: Full=Zinc finger protein 431; AltName: Full=Zinc finger protein 932) HSP 1 Score: 218.009 bits (554), Expect = 2.483e-62 Identity = 120/307 (39.09%), Postives = 177/307 (57.65%), Query Frame = 0
Query: 144 LSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQ 450
L RH + H+ E+P+KC+ C + F ASL+ H THTG KP+ CK C F + G+L +H R HT EKP++C +C + K ++H R H GE+PY+C CT + KL++H RIHTGEKPYEC C F N L+ H IHTG+KP ++C+ C ++ L++H +K HT ++P C CGK+F LKVHK TH GEK +KC+ C + L+ H HT +KP++C+QC ++F + + H+ ++ EK ++C +CG++F +L RH +H T Q
Sbjct: 231 LKRHERVHTGEKPYKCNECGKAFVCNASLRTHKTTHTGVKPYECKQCTKSFASHGQLQKHERI-HTGEKPYKCDQCGKAFASHDKFQKHERIHIGEKPYKCKQCTKSFASHDKLQKHERIHTGEKPYECKQCTKSFASHNKLQKHERIHTGEKP-YKCDQCNKAFVYESYLQVH-KKTHTGEKPYKCNECGKAFARHSHLKVHKITHTGEKPYKCNQCGKALAYHSTLQVHQRTHTGEKPYECEQCGKAFANQSYFQVHKRIH---------TGEKPYKCDQCGKAFVGSSDLKRHERVHTGRETLQ 525 HSP 2 Score: 198.364 bits (503), Expect = 4.764e-55 Identity = 113/320 (35.31%), Postives = 175/320 (54.69%), Query Frame = 0
Query: 127 QKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
+++ CN C+ + +L H ++HS E+P++C+ C + F + L+ H+ THTG KP++C C F L H R HT EKP+ C +C + L+ H R HTGE+PY+C C A LKRH R+HTGEKPY+C+ C F + SL+ H+ HTG KP ++C+ C + L+ H +++HT ++P C CGK+F + H++ H GEK +KC C S S L+ H IHT +KP++C QC +SF L++H+ ++ EK ++C +C ++F ++ L H H E
Sbjct: 102 KRYKCNQCDKAYSRHSILQIHKRTHSGEKPYECNQCGKAFTQHSHLKIHMVTHTGEKPYKCDQCGKAFAFHSTLQVHKR-THTGEKPYECNQCSKAFAHHCHLRVHKRIHTGEKPYKCDQCGKAFVGQNDLKRHERVHTGEKPYKCNECGKAFVCNASLRTHKTTHTGVKP-YECKQCTKSFASHGQLQKH-ERIHTGEKPYKCDQCGKAFASHDKFQKHERIHIGEKPYKCKQCTKSFASHDKLQKHERIHTGEKPYECKQCTKSFASHNKLQKHERIH---------TGEKPYKCDQCNKAFVYESYLQVHKKTHTGE 409 HSP 3 Score: 194.897 bits (494), Expect = 8.057e-54 Identity = 118/327 (36.09%), Postives = 170/327 (51.99%), Query Frame = 0
Query: 120 KRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
KR+ + + CN C + L HM +H+ E+P+KC C + F ++LQ H THTG KP+ C C F L H R HT EKP++C +C + V + LKRH R HTGE+PY+C C A L+ H HTG KPYEC C F L+ H IHTG+KP ++C+ C + H +++H ++P CK C KSF L+ H++ H GEK ++C C S S L+ H IHT +KP++CDQC+++F + L+ H+ + EK ++C ECG++F +L H H E
Sbjct: 123 KRTHSGEKPYECNQCGKAFTQHSHLKIHMVTHTGEKPYKCDQCGKAFAFHSTLQVHKRTHTGEKPYECNQCSKAFAHHCHLRVHKRI-HTGEKPYKCDQCGKAFVGQNDLKRHERVHTGEKPYKCNECGKAFVCNASLRTHKTTHTGVKPYECKQCTKSFASHGQLQKHERIHTGEKP-YKCDQCGKAFASHDKFQKH-ERIHIGEKPYKCKQCTKSFASHDKLQKHERIHTGEKPYECKQCTKSFASHNKLQKHERIHTGEKPYKCDQCNKAFVYESYLQVHKKTH---------TGEKPYKCNECGKAFARHSHLKVHKITHTGE 437 HSP 4 Score: 192.2 bits (487), Expect = 9.682e-53 Identity = 115/366 (31.42%), Postives = 186/366 (50.82%), Query Frame = 0
Query: 105 FEMDQAKGKVLKASTKRSQMVVQK----HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQI 466
+E +Q + S + MV + C+ C L H ++H+ E+P++C+ C + F L+ H HTG KP++C C F +L RH R HT EKP++C EC + V + L+ H HTG +PY+C CT + +L++H RIHTGEKPY+CD C F + + H IH G+KP ++C+ C + L+ H +++HT ++P CK C KSF L+ H++ H GEK +KCD C + + + +L+ H HT +KP++C++C ++F + LK H+ + EK ++C +CG++ + L H H E + + Q Q+
Sbjct: 132 YECNQCGKAFTQHSHLKIHMVTHTGEKPYKCDQCGKAFAFHSTLQVHKRTHTGEKPYECNQCSKAFAHHCHLRVHKRIHTGEKPYKCDQCGKAFVGQNDLKRHERV-HTGEKPYKCNECGKAFVCNASLRTHKTTHTGVKPYECKQCTKSFASHGQLQKHERIHTGEKPYKCDQCGKAFASHDKFQKHERIHIGEKP-YKCKQCTKSFASHDKLQKH-ERIHTGEKPYECKQCTKSFASHNKLQKHERIHTGEKPYKCDQCNKAFVYESYLQVHKKTHTGEKPYKCNECGKAFARHSHLKVHKITH---------TGEKPYKCNQCGKALAYHSTLQVHQRTHTGEKPYECEQCGKAFANQSYFQV 485 HSP 5 Score: 187.963 bits (476), Expect = 2.814e-51 Identity = 111/296 (37.50%), Postives = 158/296 (53.38%), Query Frame = 0
Query: 151 HSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
H+ E+ +KC+ C++ + + LQ H TH+G KP+ C C FT L H+ HT EKP++C +C + S L+ H R HTGE+PY+C C+ A L+ H RIHTGEKPY+CD C F N LK H +HTG+KP ++C C LR H + HT +P CK C KSF L+ H++ H GEK +KCD C + S + H IH +KP++C QC +SF L++H+ ++ EK +EC +C +SF L +H +H E
Sbjct: 98 HTGEKRYKCNQCDKAYSRHSILQIHKRTHSGEKPYECNQCGKAFTQHSHLKIHM-VTHTGEKPYKCDQCGKAFAFHSTLQVHKRTHTGEKPYECNQCSKAFAHHCHLRVHKRIHTGEKPYKCDQCGKAFVGQNDLKRHERVHTGEKP-YKCNECGKAFVCNASLRTH-KTTHTGVKPYECKQCTKSFASHGQLQKHERIHTGEKPYKCDQCGKAFASHDKFQKHERIHIGEKPYKCKQCTKSFASHDKLQKHERIH---------TGEKPYECKQCTKSFASHNKLQKHERIHTGE 381 HSP 6 Score: 176.792 bits (447), Expect = 3.666e-47 Identity = 96/266 (36.09%), Postives = 149/266 (56.02%), Query Frame = 0
Query: 120 KRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQ 385
K + V+ + C C + L +H + H+ E+P+KC C + F + Q H H G KP++CK C F + +L +H R HT EKP+ C +C S +KL++H R HTGE+PY+C C A L+ H + HTGEKPY+C+ C F + + LK H++ HTG+KP ++C C + L++H Q+ HT ++P C+ CGK+F ++ +VHK+ H GEK +KCD C + + L+ H +HT ++ Q
Sbjct: 263 KTTHTGVKPYECKQCTKSFASHGQLQKHERIHTGEKPYKCDQCGKAFASHDKFQKHERIHIGEKPYKCKQCTKSFASHDKLQKHERI-HTGEKPYECKQCTKSFASHNKLQKHERIHTGEKPYKCDQCNKAFVYESYLQVHKKTHTGEKPYKCNECGKAFARHSHLKVHKITHTGEKP-YKCNQCGKALAYHSTLQVH-QRTHTGEKPYECEQCGKAFANQSYFQVHKRIHTGEKPYKCDQCGKAFVGSSDLKRHERVHTGRETLQ 525 HSP 7 Score: 145.206 bits (365), Expect = 4.915e-36 Identity = 89/245 (36.33%), Postives = 134/245 (54.69%), Query Frame = 0
Query: 202 RHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
RH R HT EKP+ + + V S L+ HTGE+ Y+C C A L+ H R H+GEKPYEC+ C FTQ + LK H + HTG+KP ++C+ C + L++H ++ HT ++P C C K+F L+VHK+ H GEK +KCD C + + Q L+ H +HT +KP++C++C ++F L+ H+ + V P +EC +C +SF G L +H +H E
Sbjct: 65 RHER-NHTGEKPYEGIQYGEAFVHHSSLQMRKIIHTGEKRYKCNQCDKAYSRHSILQIHKRTHSGEKPYECNQCGKAFTQHSHLKIHMVTHTGEKP-YKCDQCGKAFAFHSTLQVH-KRTHTGEKPYECNQCSKAFAHHCHLRVHKRIHTGEKPYKCDQCGKAFVGQNDLKRHERVHTGEKPYKCNECGKAFVCNASLRTHKTTH---TGVKP------YECKQCTKSFASHGQLQKHERIHTGE 297
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|317373492|sp|Q8IZ26.3|ZNF34_HUMAN (RecName: Full=Zinc finger protein 34; AltName: Full=Zinc finger protein KOX32) HSP 1 Score: 217.238 bits (552), Expect = 8.844e-62 Identity = 122/315 (38.73%), Postives = 170/315 (53.97%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALH 443
H C+YC T L +H + H+EE+P+KC C + F NH H+G P+RC C FT L++H R HT EKP++C EC S L H R HTGE+PY+C C A D L RH R HTGEKP+EC C FTQS++L H+ IHTG+KP ++C C +KT L H Q+ HT ++P C CGK F L H++ H GEK +KC C + + L H +H +KP++C C ++F Q L +H+ ++ EK ++C ECG++FRH N+ +H +H
Sbjct: 251 HYCSYCGKTFRYSANLVKHQRLHTEEKPYKCDECGKAFSQSCEFINHRRMHSGEIPYRCDECGKTFTRRPNLMKHQRI-HTGEKPYKCGECGKHFSAYSSLIYHQRIHTGEKPYKCNDCGKAFSDGSILIRHRRTHTGEKPFECKECGKGFTQSSNLIQHQRIHTGEKP-YKCNECEKAFIQKTKLVEH-QRSHTGEKPYECNDCGKVFSQSTHLIQHQRIHTGEKPYKCSECGKAFHNSSRLIHHQRLHHGEKPYRCSDCKKAFSQSTYLIQHRRIHTG---------EKPYKCSECGKAFRHSSNMCQHQRIH 553 HSP 2 Score: 190.274 bits (482), Expect = 8.162e-52 Identity = 117/332 (35.24%), Postives = 165/332 (49.70%), Query Frame = 0
Query: 143 LLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTH----------------------------TGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
LLSR + ++RPHKC +CE+ F+ + L NH H TG K H C +C F S LV+H R HT EKP++C EC + + + H R H+GE PY+C C L +H RIHTGEKPY+C C F+ +SL H+ IHTG+KP ++C C + L H ++ HT ++P CK CGK F L H++ H GEK +KC+ C + I + L H HT +KP++C+ C + F Q L +HQ ++ EK ++C ECG++F + LI H LH E
Sbjct: 184 LLSRPV---PDQRPHKCDICEQSFEQRSYLNNHKRVHRSKKTNTVRNSGEIFSANLVVKEDQKIPTGKKLHYCSYCGKTFRYSANLVKHQRL-HTEEKPYKCDECGKAFSQSCEFINHRRMHSGEIPYRCDECGKTFTRRPNLMKHQRIHTGEKPYKCGECGKHFSAYSSLIYHQRIHTGEKP-YKCNDCGKAFSDGSILIRH-RRTHTGEKPFECKECGKGFTQSSNLIQHQRIHTGEKPYKCNECEKAFIQKTKLVEHQRSHTGEKPYECNDCGKVFSQSTHLIQHQRIHTG---------EKPYKCSECGKAFHNSSRLIHHQRLHHGE 500 HSP 3 Score: 188.348 bits (477), Expect = 3.844e-51 Identity = 106/290 (36.55%), Postives = 154/290 (53.10%), Query Frame = 0
Query: 157 HKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
H CS C + F+ A+L H HT KP++C C F+ S E + H R H+ E P+RC EC + L +H R HTGE+PY+C C L H RIHTGEKPY+C+ C F+ + L HR HTG+KP F+C+ C + ++L H Q++HT ++P C C K+F + L H+++H GEK ++C+ C HL H IHT +KP++C +C ++F L HQ L+H EK + C +C ++F LI+H +H E
Sbjct: 251 HYCSYCGKTFRYSANLVKHQRLHTEEKPYKCDECGKAFSQSCEFINHRRM-HSGEIPYRCDECGKTFTRRPNLMKHQRIHTGEKPYKCGECGKHFSAYSSLIYHQRIHTGEKPYKCNDCGKAFSDGSILIRHRRTHTGEKP-FECKECGKGFTQSSNLIQH-QRIHTGEKPYKCNECEKAFIQKTKLVEHQRSHTGEKPYECNDCGKVFSQSTHLIQHQRIHTGEKPYKCSECGKAFHNSSRLIHHQRLHHG---------EKPYRCSDCKKAFSQSTYLIQHRRIHTGE 528 HSP 4 Score: 93.5893 bits (231), Expect = 8.746e-19 Identity = 50/139 (35.97%), Postives = 75/139 (53.96%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGE 267
+ CN C ++ L H +SH+ E+P++C+ C + F L H HTG KP++C C F S L+ H R H EKP+RC++C + + + L +H R HTGE+PY+C C A + + +H RIH E
Sbjct: 419 YKCNECEKAFIQKTKLVEHQRSHTGEKPYECNDCGKVFSQSTHLIQHQRIHTGEKPYKCSECGKAFHNSSRLIHHQRLHHG-EKPYRCSDCKKAFSQSTYLIQHRRIHTGEKPYKCSECGKAFRHSSNMCQHQRIHLRE 556 HSP 5 Score: 73.9442 bits (180), Expect = 1.360e-12 Identity = 42/120 (35.00%), Postives = 65/120 (54.17%), Query Frame = 0
Query: 120 KRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGE 239
+RS + + CN C + L +H + H+ E+P+KCS C + F + L +H H G KP+RC C+ F+ S L++H R HT EKP++C+EC + S + +H R H E
Sbjct: 438 QRSHTGEKPYECNDCGKVFSQSTHLIQHQRIHTGEKPYKCSECGKAFHNSSRLIHHQRLHHGEKPYRCSDCKKAFSQSTYLIQHRRI-HTGEKPYKCSECGKAFRHSSNMCQHQRIHLRE 556
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|296453062|sp|Q7Z7L9.2|ZSCA2_HUMAN (RecName: Full=Zinc finger and SCAN domain-containing protein 2; AltName: Full=Zinc finger protein 29 homolog; Short=Zfp-29; AltName: Full=Zinc finger protein 854) HSP 1 Score: 218.394 bits (555), Expect = 9.376e-62 Identity = 119/316 (37.66%), Postives = 170/316 (53.80%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
C C + + L H ++H+ E+P+ C C + F +SL H HTG KP+ CK C F+ + L+RH R HT EKP++CT+C + S L H R HTGE+PYQC C + + L H R H EKPY+C +C F+QS+SL AH+ +HTG+KP ++C C + ++L H Q++HT ++P C CGK F R L VH++TH GEK +KC +C S L H H KP++C +C + F +L HQ ++ EK ++CPECG+ F + N I H H E
Sbjct: 308 CAECGKSFSRSPNLIAHQRTHTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEKPYECKECGESFSYNSNLIRHQRI-HTGEKPYKCTDCGQRFSQSSALITHRRTHTGEKPYQCSECGKSFSRSSNLATHRRTHMVEKPYKCGVCGKSFSQSSSLIAHQGMHTGEKP-YECLTCGESFSWSSNLLKH-QRIHTGEKPYKCSECGKCFSQRSQLVVHQRTHTGEKPYKCLMCGKSFSRGSILVMHQRAHLGDKPYRCPECGKGFSWNSVLIIHQRIHTG---------EKPYKCPECGKGFSNSSNFITHQRTHMKE 611 HSP 2 Score: 214.927 bits (546), Expect = 2.264e-60 Identity = 138/416 (33.17%), Postives = 200/416 (48.08%), Query Frame = 0
Query: 55 DTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGE-----FDDDFEMDQAKG--------------KVLKASTKRSQMVVQK--------HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALH 443
D NE S + + P+G+ A+ + E +G+ PGE D E+ Q G + K +++S ++ + + C+ C + SRH +H+ E+P+KC C + F A+L H HTG KP +C C F+ S L+ H R HT EKP+ C EC S S L H HTGE+PY+C C + L RH RIHTGEKPY+C C RF+QS++L HR HTG+KP +QC C + R ++L H ++ H ++P C +CGKSF +L H+ H GEK ++C C S +L H IHT +KP++C +C + F Q+ L HQ + EK ++C CG+SF L+ H H
Sbjct: 150 DMFENE-SRKIFSEMPEGESAQHSDGESDFERDAGIQRLQGHSPGEDHGEVVSQDREVGQLIGLQGTYLGEKPYECPQCGKTFSRKSHLITHERTHTGEKYYKCDECGKSFSDGSNFSRHQTTHTGEKPYKCRDCGKSFSRSANLITHQRIHTGEKPFQCAECGKSFSRSPNLIAHQR-THTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEKPYECKECGESFSYNSNLIRHQRIHTGEKPYKCTDCGQRFSQSSALITHRRTHTGEKP-YQCSECGKSFSRSSNLATH-RRTHMVEKPYKCGVCGKSFSQSSSLIAHQGMHTGEKPYECLTCGESFSWSSNLLKHQRIHTGEKPYKCSECGKCFSQRSQLVVHQRTHTG---------EKPYKCLMCGKSFSRGSILVMHQRAH 552 HSP 3 Score: 166.777 bits (421), Expect = 4.623e-43 Identity = 93/254 (36.61%), Postives = 135/254 (53.15%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPF 384
C C + L RH + H+ E+P+KC+ C + F ++L H THTG KP++C C F+ S L H R H EKP++C C S + S L H HTGE+PY+C C + + L +H RIHTGEKPY+C C F+Q + L H+ HTG+KP ++C +C + R + L +H Q+ H D+P C CGK F L +H++ H GEK +KC C + + +H H +K +
Sbjct: 364 CKECGESFSYNSNLIRHQRIHTGEKPYKCTDCGQRFSQSSALITHRRTHTGEKPYQCSECGKSFSRSSNLATH-RRTHMVEKPYKCGVCGKSFSQSSSLIAHQGMHTGEKPYECLTCGESFSWSSNLLKHQRIHTGEKPYKCSECGKCFSQRSQLVVHQRTHTGEKP-YKCLMCGKSFSRGSILVMH-QRAHLGDKPYRCPECGKGFSWNSVLIIHQRIHTGEKPYKCPECGKGFSNSSNFITHQRTHMKEKLY 614 HSP 4 Score: 149.443 bits (376), Expect = 4.955e-37 Identity = 81/228 (35.53%), Postives = 120/228 (52.63%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCF 356
+ C C + L H ++H+ E+P++CS C + F ++L H TH KP++C C F+ S L+ H + HT EKP+ C C S S L +H R HTGE+PY+C C +L H R HTGEKPY+C +C F++ + L H+ H GDKP ++C C + L +H Q++HT ++P C CGK F + H++TH EK +
Sbjct: 390 YKCTDCGQRFSQSSALITHRRTHTGEKPYQCSECGKSFSRSSNLATHRRTHMVEKPYKCGVCGKSFSQSSSLIAH-QGMHTGEKPYECLTCGESFSWSSNLLKHQRIHTGEKPYKCSECGKCFSQRSQLVVHQRTHTGEKPYKCLMCGKSFSRGSILVMHQRAHLGDKP-YRCPECGKGFSWNSVLIIH-QRIHTGEKPYKCPECGKGFSNSSNFITHQRTHMKEKLY 614 HSP 5 Score: 141.354 bits (355), Expect = 2.197e-34 Identity = 81/219 (36.99%), Postives = 115/219 (52.51%), Query Frame = 0
Query: 236 HTGERPYQCPHCTYASPDTFKLKRHL----RIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQ 450
+ GE+PY+CP C TF K HL R HTGEK Y+CD C F+ ++ H+ HTG+KP ++C C + R +L H Q++HT ++P C CGKSF L H++TH GEK + C C S ++ L +H IHT +KP++C +C +SF L RHQ ++ EK ++C +CG+ F LI H H E Q
Sbjct: 216 YLGEKPYECPQCG----KTFSRKSHLITHERTHTGEKYYKCDECGKSFSDGSNFSRHQTTHTGEKP-YKCRDCGKSFSRSANLITH-QRIHTGEKPFQCAECGKSFSRSPNLIAHQRTHTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEKPYECKECGESFSYNSNLIRHQRIHTG---------EKPYKCTDCGQRFSQSSALITHRRTHTGEKPYQ 419 HSP 6 Score: 84.3445 bits (207), Expect = 8.796e-16 Identity = 46/137 (33.58%), Postives = 67/137 (48.91%), Query Frame = 0
Query: 310 RKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
R+ + +Q + ++P C CGK+F + L H++TH GEK +KCD C S + H HT +KP++C C +SF + L HQ ++ EK +C ECG+SF NLI H H E
Sbjct: 204 REVGQLIGLQGTYLGEKPYECPQCGKTFSRKSHLITHERTHTGEKYYKCDECGKSFSDGSNFSRHQTTHTGEKPYKCRDCGKSFSRSANLITHQRIHTG---------EKPFQCAECGKSFSRSPNLIAHQRTHTGE 331 HSP 7 Score: 59.6918 bits (143), Expect = 3.905e-8 Identity = 34/102 (33.33%), Postives = 51/102 (50.00%), Query Frame = 0
Query: 349 THEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQ 450
T+ GEK ++C C + + HL +H HT +K ++CD+C +SF RHQ + EK ++C +CG+SF NLI H +H E Q
Sbjct: 215 TYLGEKPYECPQCGKTFSRKSHLITHERTHTGEKYYKCDECGKSFSDGSNFSRHQTTHTG---------EKPYKCRDCGKSFSRSANLITHQRIHTGEKPFQ 307 HSP 8 Score: 55.4546 bits (132), Expect = 9.303e-7 Identity = 29/98 (29.59%), Postives = 49/98 (50.00%), Query Frame = 0
Query: 116 KASTKRSQMVVQK--------HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVR 205
K ++RSQ+VV + + C C + + +L H ++H ++P++C C +GF + L H HTG KP++C C F+ S + H R
Sbjct: 509 KCFSQRSQLVVHQRTHTGEKPYKCLMCGKSFSRGSILVMHQRAHLGDKPYRCPECGKGFSWNSVLIIHQRIHTGEKPYKCPECGKGFSNSSNFITHQR 606
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957761|ref|XP_021923327.1| (transcriptional repressor CTCF-like isoform X1 [Zootermopsis nevadensis] >gi|1227957763|ref|XP_021923334.1| transcriptional repressor CTCF-like isoform X1 [Zootermopsis nevadensis] >gi|1227957765|ref|XP_021923343.1| transcriptional repressor CTCF-like isoform X1 [Zootermopsis nevadensis] >gi|1227957767|ref|XP_021923353.1| transcriptional repressor CTCF-like isoform X1 [Zootermopsis nevadensis]) HSP 1 Score: 792.727 bits (2046), Expect = 0.000e+0 Identity = 400/626 (63.90%), Postives = 471/626 (75.24%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS A + A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 94 MTVVSGVADPSSEASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 695
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957773|ref|XP_021923380.1| (transcriptional repressor CTCF-like isoform X4 [Zootermopsis nevadensis]) HSP 1 Score: 792.341 bits (2045), Expect = 0.000e+0 Identity = 400/626 (63.90%), Postives = 471/626 (75.24%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS A + A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 92 MTVVSGVADPSSEASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 693
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957775|ref|XP_021923389.1| (transcriptional repressor CTCF-like isoform X5 [Zootermopsis nevadensis]) HSP 1 Score: 790.801 bits (2041), Expect = 0.000e+0 Identity = 400/626 (63.90%), Postives = 472/626 (75.40%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS+ + E A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 94 MTVVSDPSSE---ASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 692
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957771|ref|XP_021923373.1| (transcriptional repressor CTCF-like isoform X3 [Zootermopsis nevadensis]) HSP 1 Score: 790.415 bits (2040), Expect = 0.000e+0 Identity = 400/626 (63.90%), Postives = 471/626 (75.24%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS P + A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 94 MTVVSVADPSS-EASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 694
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957777|ref|XP_021923399.1| (transcriptional repressor CTCF-like isoform X6 [Zootermopsis nevadensis]) HSP 1 Score: 789.26 bits (2037), Expect = 0.000e+0 Identity = 400/626 (63.90%), Postives = 471/626 (75.24%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS A + A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 43 MTVVSGVADPSSEASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 644
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1339063903|ref|XP_023711918.1| (transcriptional repressor CTCF isoform X5 [Cryptotermes secundus] >gi|1330932403|gb|PNF42638.1| hypothetical protein B7P43_G01275 [Cryptotermes secundus] >gi|1330932407|gb|PNF42642.1| hypothetical protein B7P43_G01275 [Cryptotermes secundus]) HSP 1 Score: 786.563 bits (2030), Expect = 0.000e+0 Identity = 404/625 (64.64%), Postives = 458/625 (73.28%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAP--------------------SGATAENRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEG--AATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGKNQDDVTNCFGF 602
MTVVS A + S A+ A P +G + +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV E++ E + ++MAV+ QDGQ YVVLEVIQL +G+ E A T A A+ E IE + K + K E K D+ NCFGF
Sbjct: 94 MTVVSGVANASSEVSDGSSEATYVAMQPQEGHVEETITSMDASDDGNTTGGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAVHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMA--------------GEEDDDEDDDTDGEMMAVE-QDGQQYVVLEVIQLQDGDGEQAVAVVTGDAAHTMEQAVALHTDLTDDEDVIETLRNSRKLSRKDALTIRKRIETEK----------DMQNCFGF 686
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1330932406|gb|PNF42641.1| (hypothetical protein B7P43_G01275 [Cryptotermes secundus] >gi|1330932409|gb|PNF42644.1| hypothetical protein B7P43_G01275 [Cryptotermes secundus]) HSP 1 Score: 786.178 bits (2029), Expect = 0.000e+0 Identity = 404/625 (64.64%), Postives = 458/625 (73.28%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAP--------------------SGATAENRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEG--AATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGKNQDDVTNCFGF 602
MTVVS A + S A+ A P +G + +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV E++ E + ++MAV+ QDGQ YVVLEVIQL +G+ E A T A A+ E IE + K + K E K D+ NCFGF
Sbjct: 93 MTVVSGVANASSEVSDGSSEATYVAMQPQEGHVEETITSMDASDDGNTTGGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAVHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMA--------------GEEDDDEDDDTDGEMMAVE-QDGQQYVVLEVIQLQDGDGEQAVAVVTGDAAHTMEQAVALHTDLTDDEDVIETLRNSRKLSRKDALTIRKRIETEK----------DMQNCFGF 685
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1330932404|gb|PNF42639.1| (hypothetical protein B7P43_G01275 [Cryptotermes secundus]) HSP 1 Score: 785.408 bits (2027), Expect = 0.000e+0 Identity = 404/625 (64.64%), Postives = 458/625 (73.28%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAP--------------------SGATAENRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEG--AATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGKNQDDVTNCFGF 602
MTVVS A + S A+ A P +G + +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV E++ E + ++MAV+ QDGQ YVVLEVIQL +G+ E A T A A+ E IE + K + K E K D+ NCFGF
Sbjct: 71 MTVVSGVANASSEVSDGSSEATYVAMQPQEGHVEETITSMDASDDGNTTGGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAVHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMA--------------GEEDDDEDDDTDGEMMAVE-QDGQQYVVLEVIQLQDGDGEQAVAVVTGDAAHTMEQAVALHTDLTDDEDVIETLRNSRKLSRKDALTIRKRIETEK----------DMQNCFGF 663
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957769|ref|XP_021923364.1| (transcriptional repressor CTCFL-like isoform X2 [Zootermopsis nevadensis]) HSP 1 Score: 783.097 bits (2021), Expect = 0.000e+0 Identity = 393/626 (62.78%), Postives = 469/626 (74.92%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS A + A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGEL+RH+RY+HTHEKPH+CT CDY+SVELSK++ HMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 94 MTVVSGVADPSSEASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELIRHIRYKHTHEKPHKCTICDYASVELSKMRNHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 695
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1339063891|ref|XP_023711869.1| (transcriptional repressor CTCFL isoform X1 [Cryptotermes secundus] >gi|1339063893|ref|XP_023711879.1| transcriptional repressor CTCFL isoform X1 [Cryptotermes secundus] >gi|1339063895|ref|XP_023711886.1| transcriptional repressor CTCFL isoform X1 [Cryptotermes secundus] >gi|1330932401|gb|PNF42636.1| hypothetical protein B7P43_G01275 [Cryptotermes secundus]) HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0 Identity = 388/554 (70.04%), Postives = 438/554 (79.06%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAP--------------------SGATAENRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAA 533
MTVVS A + S A+ A P +G + +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV E++ E + ++MAV+ QDGQ YVVLEVIQL +G+ E A
Sbjct: 94 MTVVSGVANASSEVSDGSSEATYVAMQPQEGHVEETITSMDASDDGNTTGGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAVHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMA--------------GEEDDDEDDDTDGEMMAVE-QDGQQYVVLEVIQLQDGDGEQAV 625 The following BLAST results are available for this feature:
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of transcriptional repressor ctcf vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of transcriptional repressor ctcf vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold22_size673200:489101..492241- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold22_size673200-processed-gene-5.2 ID=snap_masked-scaffold22_size673200-processed-gene-5.2|Name=transcriptional repressor ctcf|organism=Tigriopus kingsejongensis|type=gene|length=3141bp|location=Sequence derived from alignment at scaffold22_size673200:489101..492241- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'transcriptional repressor ctcf' has the following synonyms
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