transcriptional repressor ctcf, snap_masked-scaffold22_size673200-processed-gene-5.2 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000007779 (supercontig:LSalAtl2s:LSalAtl2s455:42339:47933:1 gene:EMLSAG00000007779 transcript:EMLSAT00000007779 description:"maker-LSalAtl2s455-snap-gene-0.19") HSP 1 Score: 776.163 bits (2003), Expect = 0.000e+0 Identity = 417/647 (64.45%), Postives = 462/647 (71.41%), Query Frame = 0
Query: 37 VVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQE---------------------AKAGEA----------------------------------EDGEA--GPSGVYDFDADDPGEFDDD------------------FEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESD-VMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGKNQDDVTNCFGFDEDDD 607
V+LNAGGDQ+QTV IVPSDT EVSYVLIVQ P +E K G+A E GE GP G +D D+ EF + K K LK + KRSQ V Q HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPH+CKFCE+CFTTSGELVRHVRYRHTHEKPH+C+EC Y SVELSKLKRHMRCHTGERP+QCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCE CPTTCGRKTDLRLHVQKLHTS+ PMHCKMCGK FPDRYTLKVHKKTH+GEKCFKCDLCPYSSISQRHLESHMLIHTDQKP+ CDQCDQSFRQKQLLKRHQNLYHNPNYVPP PKEKTHEC ECGRSFRHKGNLIRHMALHDPES+AQEKA+ALK GRQR+IQI++GQ VEV TG+++D+ E+D E + E ESD VM+V+S DG YVVLEVIQL G S+ + ++S K I +++ + S +AP S+ + K ++D+ CFGFD+D+D
Sbjct: 80 VMLNAGGDQYQTVTIVPSDTNPGEVSYVLIVQQPQEEERVEAELKEEEELKEEEEEEESKKGGKAFPSVSSGEKQKKKVVALSSLASLVPLAAPRVMLSECGEGSVGPVGPGVYDFDEGNEFGGSGVLESGQEGEEGGVELEXETVSXGKRKSLKVN-KRSQCVSQAHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHKCKFCESCFTTSGELVRHVRYRHTHEKPHKCSECGYKSVELSKLKRHMRCHTGERPFQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCEFCPTTCGRKTDLRLHVQKLHTSEIPMHCKMCGKMFPDRYTLKVHKKTHDGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPYLCDQCDQSFRQKQLLKRHQNLYHNPNYVPPEPKEKTHECHECGRSFRHKGNLIRHMALHDPESSAQEKALALKXGRQRRIQIIDGQQVEVLTGDEDDEVGEDDVEAVDSE-------ESDKVMSVESHDGSQYVVLEVIQL--GNSKSHSESNSSIK------IIEGKTAAIQDSNICDVSSLRAPNEEYSNLA-------------KKRNDMATCFGFDDDED 697
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000012829 (supercontig:LSalAtl2s:LSalAtl2s97:1131613:1133645:-1 gene:EMLSAG00000012829 transcript:EMLSAT00000012829 description:"maker-LSalAtl2s97-augustus-gene-11.2") HSP 1 Score: 145.591 bits (366), Expect = 2.518e-37 Identity = 70/165 (42.42%), Postives = 92/165 (55.76%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGD 295
C+YC + LL RH++ H+ ERPH C +C +GF T +SL H H+G KPH+C C CFT S L H + H EKPH+CT C S LK H HTG P++C C LK HL +H+G+KP+ CDICH +F S +L+AH H +
Sbjct: 319 CHYCGKAFDRPSLLKRHIRIHTGERPHVCDICSKGFSTSSSLNTHRRIHSGEKPHQCGVCGKCFTASSNLYYH-KMTHVKEKPHKCTMCSKSFPTPGDLKSHTYVHTGTWPFKCHICHRGFSKQTNLKNHLLLHSGDKPFSCDICHKKFALSCNLRAHLKTHEAE 482 HSP 2 Score: 124.79 bits (312), Expect = 2.129e-30 Identity = 69/169 (40.83%), Postives = 93/169 (55.03%), Query Frame = 0
Query: 244 CPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSF----RQKQLLKRHQNLYHN 408
C +C A LKRH+RIHTGE+P+ CDIC F+ S+SL HR IH+G+KP QC +C ++L H + H ++P C MC KSFP LK H H G FKC +C Q +L++H+L+H+ KPF CD C + F + LK H+ Y N
Sbjct: 319 CHYCGKAFDRPSLLKRHIRIHTGERPHVCDICSKGFSTSSSLNTHRRIHSGEKP-HQCGVCGKCFTASSNLYYH-KMTHVKEKPHKCTMCSKSFPTPGDLKSHTYVHTGTWPFKCHICHRGFSKQTNLKNHLLLHSGDKPFSCDICHKKFALSCNLRAHLKTHEAEYQN 485 HSP 3 Score: 121.709 bits (304), Expect = 2.270e-29 Identity = 62/167 (37.13%), Postives = 90/167 (53.89%), Query Frame = 0
Query: 153 EERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQ 319
E++ C C + F + L+ H+ HTG +PH C C F+TS L H R H+ EKPH+C C S L H H E+P++C C+ + P LK H +HTG P++C ICH F++ +LK H L+H+GDKP F C++C +LR H++
Sbjct: 313 EKKELPCHYCGKAFDRPSLLKRHIRIHTGERPHVCDICSKGFSTSSSLNTHRRI-HSGEKPHQCGVCGKCFTASSNLYYHKMTHVKEKPHKCTMCSKSFPTPGDLKSHTYVHTGTWPFKCHICHRGFSKQTNLKNHLLLHSGDKP-FSCDICHKKFALSCNLRAHLK 477 HSP 4 Score: 89.7373 bits (221), Expect = 4.967e-19 Identity = 47/139 (33.81%), Postives = 70/139 (50.36%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGE 267
H+C+ C+ L+ H + HS E+PH+C VC + F ++L H TH KPH+C C F T G+L H Y HT P +C C + + LK H+ H+G++P+ C C + L+ HL+ H E
Sbjct: 345 HVCDICSKGFSTSSSLNTHRRIHSGEKPHQCGVCGKCFTASSNLYYHKMTHVKEKPHKCTMCSKSFPTPGDLKSHT-YVHTGTWPFKCHICHRGFSKQTNLKNHLLLHSGDKPFSCDICHKKFALSCNLRAHLKTHEAE 482 HSP 5 Score: 65.855 bits (159), Expect = 1.577e-11 Identity = 40/114 (35.09%), Postives = 54/114 (47.37%), Query Frame = 0
Query: 330 CKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALH 443
C CGK+F LK H + H GE+ CD+C + L +H IH+ +KP QC C + F L YH +V KEK H+C C +SF G+L H +H
Sbjct: 319 CHYCGKAFDRPSLLKRHIRIHTGERPHVCDICSKGFSTSSSLNTHRRIHSGEKPHQCGVCGKCFTASSNL-----YYHKMTHV----KEKPHKCTMCSKSFPTPGDLKSHTYVH 423 HSP 6 Score: 57.3806 bits (137), Expect = 6.393e-9 Identity = 35/105 (33.33%), Postives = 49/105 (46.67%), Query Frame = 0
Query: 112 GKVLKAST-----KRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHE 211
GK AS+ K + + + H C C+ + P L H H+ P KC +C RGF +L+NH+ H+G KP C C F S L H++ THE
Sbjct: 379 GKCFTASSNLYYHKMTHVKEKPHKCTMCSKSFPTPGDLKSHTYVHTGTWPFKCHICHRGFSKQTNLKNHLLLHSGDKPFSCDICHKKFALSCNLRAHLK---THE 480
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000012553 (supercontig:LSalAtl2s:LSalAtl2s926:114223:115801:1 gene:EMLSAG00000012553 transcript:EMLSAT00000012553 description:"maker-LSalAtl2s926-augustus-gene-1.3") HSP 1 Score: 135.961 bits (341), Expect = 3.179e-35 Identity = 70/162 (43.21%), Postives = 90/162 (55.56%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIH 292
C+YC + LL+RH+++H+ ERPH C VC++GF T +SL H H+G KPH C+ C FT S L H R H EKPH+C C S LK HM H G P++C C LK HL +HTGEKP+EC +C RF ++KAH H
Sbjct: 215 CDYCGKCFDRPSLLNRHLRTHTGERPHVCDVCDKGFSTSSSLNTHRRIHSGEKPHECETCGKRFTASSNLYYH-RMTHVKEKPHKCELCQKSFPTPGDLKSHMYIHNGSWPHRCHICDRGFSKVTNLKNHLFLHTGEKPHECPVCGKRFALGCNMKAHLKTH 375 HSP 2 Score: 110.153 bits (274), Expect = 2.111e-26 Identity = 69/196 (35.20%), Postives = 90/196 (45.92%), Query Frame = 0
Query: 257 LKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEK 452
L RHLR HTGE+P+ CD+C F+ S+SL HR IH+G+K P C+ CGK F L H+ TH EK KC+LC S + L+SHM IH P +C CD+ F + LK H L+ EK HECP CG+ F N+ H+ H +T+ K
Sbjct: 228 LNRHLRTHTGERPHVCDVCDKGFSTSSSLNTHRRIHSGEK------------------------------PHECETCGKRFTASSNLYYHRMTHVKEKPHKCELCQKSFPTPGDLKSHMYIHNGSWPHRCHICDRGFSKVTNLKNHLFLHTG---------EKPHECPVCGKRFALGCNMKAHLKTHHTNNTSPSK 384 HSP 3 Score: 109.383 bits (272), Expect = 4.956e-26 Identity = 61/177 (34.46%), Postives = 92/177 (51.98%), Query Frame = 0
Query: 149 KSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSD 325
K+ S+++ C C + F + L H+ THTG +PH C C+ F+TS L H R H+ EKPH C C S L H H E+P++C C + P LK H+ IH G P+ C IC F++ +LK H +HTG+KP +C +C +++ H++ HT++
Sbjct: 205 KADSKKKMLPCDYCGKCFDRPSLLNRHLRTHTGERPHVCDVCDKGFSTSSSLNTHRRI-HSGEKPHECETCGKRFTASSNLYYHRMTHVKEKPHKCELCQKSFPTPGDLKSHMYIHNGSWPHRCHICDRGFSKVTNLKNHLFLHTGEKP-HECPVCGKRFALGCNMKAHLKTHHTNN 379 HSP 4 Score: 105.916 bits (263), Expect = 5.906e-25 Identity = 62/187 (33.16%), Postives = 86/187 (45.99%), Query Frame = 0
Query: 227 SKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVP 413
S L RH+R HTGERP+ C C + L H RIH+GEKP+EC+ C RFT S++L HR+ H +KP C++C KSFP LK H H G +C +C +L++H+ +HT +KP +C C + F +K H +H N P
Sbjct: 226 SLLNRHLRTHTGERPHVCDVCDKGFSTSSSLNTHRRIHSGEKPHECETCGKRFTASSNLYYHRMTHVKEKP------------------------------HKCELCQKSFPTPGDLKSHMYIHNGSWPHRCHICDRGFSKVTNLKNHLFLHTGEKPHECPVCGKRFALGCNMKAHLKTHHTNNTSP 382 HSP 5 Score: 66.6254 bits (161), Expect = 5.428e-12 Identity = 40/115 (34.78%), Postives = 56/115 (48.70%), Query Frame = 0
Query: 330 CKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHD 444
C CGK F L H +TH GE+ CD+C + L +H IH+ +KP +C+ C + F L YH +V KEK H+C C +SF G+L HM +H+
Sbjct: 215 CDYCGKCFDRPSLLNRHLRTHTGERPHVCDVCDKGFSTSSSLNTHRRIHSGEKPHECETCGKRFTASSNL-----YYHRMTHV----KEKPHKCELCQKSFPTPGDLKSHMYIHN 320 HSP 6 Score: 65.855 bits (159), Expect = 9.021e-12 Identity = 30/81 (37.04%), Postives = 42/81 (51.85%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHT 209
H C C + P L HM H+ PH+C +C+RGF + +L+NH+ HTG KPH C C F + H++ HT
Sbjct: 297 HKCELCQKSFPTPGDLKSHMYIHNGSWPHRCHICDRGFSKVTNLKNHLFLHTGEKPHECPVCGKRFALGCNMKAHLKTHHT 377
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000008067 (supercontig:LSalAtl2s:LSalAtl2s47:261473:266026:-1 gene:EMLSAG00000008067 transcript:EMLSAT00000008067 description:"maker-LSalAtl2s47-augustus-gene-2.33") HSP 1 Score: 141.354 bits (355), Expect = 3.428e-35 Identity = 95/283 (33.57%), Postives = 130/283 (45.94%), Query Frame = 0
Query: 128 KHMCNYCNYTTPKRYLLSRHMKSHSEERP-----------------------HK------CSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRH--THE---KPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGD-KPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHM 375
KH+C YC + L H+K+HS E P HK C+VC R + ++L+ H HTG KPH+C C+ FT +L H++ H HE K H C+ CD S L +H + H ER ++C C A LK HL H+GE+P+ C C F ++LK H IHTG+ K ++C CP T +DL++H K H+ + P C C K+F + L H TH G K F+C C S S L H
Sbjct: 348 KHVCEYCGRLYDNLHYLRIHVKTHSTEAPLFPCEECHEKFSSISALKIHQKFHKGETQFTCTVCRRTCLSKSALETHSLIHTGYKPHQCDQCDRRFTQKSQLNYHLKTVHASIHENKPKTHFCSFCDKGFFTSSALNKHTKTHNQERNFKCVECGKAFIQKAHLKTHLLQHSGERPFVCVTCGKSFFTHSNLKEHSKIHTGEKKKYYECSACPATYVNASDLKIHTLK-HSGESPFSCDFCKKTFRSKRHLGYHICTHIGMKRFQCKNCNKSFTSPSGLRQHF 629 HSP 2 Score: 136.732 bits (343), Expect = 1.038e-33 Identity = 110/356 (30.90%), Postives = 163/356 (45.79%), Query Frame = 0
Query: 126 VQKHMCNYCNYT-----TPKRYLLSRHMKSHSEE---------RPHKCSVCERGFKTLASLQNHVNTHTGTKP-HRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLR-----IHTGE-KPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEK--CFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDP-ESTAQEKAIALK 457
++ +MC YC T K++LL + +S S E H C C R + L L+ HV TH+ P C+ C F++ L H ++ H E CT C + + S L+ H HTG +P+QC C +L HL+ IH + K + C C F S++L H H ++ F+C C +K L+ H+ + H+ +RP C CGKSF LK H K H GEK ++C CP + ++ L+ H L H+ + PF CD C ++FR K+ L YH ++ K +C C +SF L +H + HD TA E A +K
Sbjct: 304 LRHNMCPYCGKTFSAASNMKKHLLIHNQQSDSNEDGKSSTEQQFKHVCEYCGRLYDNLHYLRIHVKTHSTEAPLFPCEECHEKFSSISALKIHQKF-HKGETQFTCTVCRRTCLSKSALETHSLIHTGYKPHQCDQCDRRFTQKSQLNYHLKTVHASIHENKPKTHFCSFCDKGFFTSSALNKHTKTHNQERN-FKCVECGKAFIQKAHLKTHLLQ-HSGERPFVCVTCGKSFFTHSNLKEHSKIHTGEKKKYYECSACPATYVNASDLKIHTLKHSGESPFSCDFCKKTFRSKRHLG-----YHICTHI----GMKRFQCKNCNKSFTSPSGLRQHFSHHDTCHQTASEGAYTIK 647 HSP 3 Score: 127.102 bits (318), Expect = 1.232e-30 Identity = 126/459 (27.45%), Postives = 191/459 (41.61%), Query Frame = 0
Query: 22 STRATAPSGATAENRVVLNAGGDQFQTVHIVPSDTGSNEVSYVL--IVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEF-----DDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNH-VNTH----TGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTG---ERPYQCPHCTYASPDTFKLKRHLRIH-----TGEKPYECDICHARFTQSNSLKAHRLIHT--------GDKPVFQ-----CELCPTTCGRKTDLRLHVQKLHTSDRPMH-CKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
ST A + + L GG+ I D S+E+ L ++P Q +KA G DF + +P F F ++ K+L + ++ C C + + L+ H++ H++E+P+ C +C + F + L +H +N H T TK CE C G V R+ H+KP D E + + G ++ ++C C F K HL +H G + C C F+ ++++K H LIH G Q CE C LR+HV K H+++ P+ C+ C + F LK+H+K H+GE F C +C + +S+ LE+H LIHT KP QCDQCD+ F QK L H H + P KTH C C + F L +H H+ E
Sbjct: 55 STSAFLLGSVSKSIKHALLQGGEL-----IYLPDVSSSELRIFLNKFLEP---QHSKADSKVIFSVGCLLGIDFPSSEPSVFPCPHCSKKFTLN----KLLSRHLRVVHSTNPEYQCLICLHRCRSKSELTIHVRIHTKEKPYPCHICSKFFAQTSQLNDHLINVHNESITPTKKGCSNVCEICGLKLGSRVAVRRHIKIHQKPDVKEMSDIEDEEEDEDEDDEEELLGDEEKKSFECIFC----KKRFSQKSHLSVHEQGTHQGLRHNMCPYCGKTFSAASNMKKHLLIHNQQSDSNEDGKSSTEQQFKHVCEYCGRLYDNLHYLRIHV-KTHSTEAPLFPCEECHEKFSSISALKIHQKFHKGETQFTCTVCRRTCLSKSALETHSLIHTGYKPHQCDQCDRRFTQKSQLNYHLKTVHASIHENKP---KTHFCSFCDKGFFTSSALNKHTKTHNQE 493 HSP 4 Score: 124.405 bits (311), Expect = 1.091e-29 Identity = 88/314 (28.03%), Postives = 141/314 (44.90%), Query Frame = 0
Query: 154 ERPHKCSVCERGFKTLASLQNH-VNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTH-------------EKPHRCTECDYSSVELSKLKRHMRCHTGERP-YQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTS---DRPM--HCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPES 447
++ +C C++ F + L H TH G + + C +C F+ + + +H+ + + H C C L L+ H++ H+ E P + C C LK H + H GE + C +C ++L+ H LIHTG KP QC+ C +K+ L H++ +H S ++P C C K F L H KTH E+ FKC C + I + HL++H+L H+ ++PF C C +SF LK H ++ K+K +EC C ++ + +L H H ES
Sbjct: 275 KKSFECIFCKKRFSQKSHLSVHEQGTHQGLRHNMCPYCGKTFSAASNMKKHLLIHNQQSDSNEDGKSSTEQQFKHVCEYCGRLYDNLHYLRIHVKTHSTEAPLFPCEECHEKFSSISALKIHQKFHKGETQFTCTVCRRTCLSKSALETHSLIHTGYKP-HQCDQCDRRFTQKSQLNYHLKTVHASIHENKPKTHFCSFCDKGFFTSSALNKHTKTHNQERNFKCVECGKAFIQKAHLKTHLLQHSGERPFVCVTCGKSFFTHSNLKEHSKIH-------TGEKKKYYECSACPATYVNASDLKIHTLKHSGES 580 HSP 5 Score: 75.485 bits (184), Expect = 2.344e-14 Identity = 62/224 (27.68%), Postives = 96/224 (42.86%), Query Frame = 0
Query: 242 YQCPHCTYASPDTFKLKRHLR-IHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHT-SDRPMH------CKMCGKSFPDRYTLKVHKKTHEGEKCFKC-DLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLK-----RHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQE 451
+ CPHC+ L RHLR +H+ Y+C IC R + L H IHT +KP + C +C + + L H+ +H S P C++CG R ++ H K H+ + D+ E +L ++K F+C C + F QK L HQ L HN CP CG++F N+ +H+ +H+ +S + E
Sbjct: 128 FPCPHCSKKFTLNKLLSRHLRVVHSTNPEYQCLICLHRCRSKSELTIHVRIHTKEKP-YPCHICSKFFAQTSQLNDHLINVHNESITPTKKGCSNVCEICGLKLGSRVAVRRHIKIHQKPDVKEMSDIEDEEEDEDEDDEEELLGDEEKKSFECIFCKKRFSQKSHLSVHEQGTHQGLRHN-------------MCPYCGKTFSAASNMKKHLLIHNQQSDSNE 337
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000010896 (supercontig:LSalAtl2s:LSalAtl2s726:269584:271775:1 gene:EMLSAG00000010896 transcript:EMLSAT00000010896 description:"maker-LSalAtl2s726-augustus-gene-2.17") HSP 1 Score: 129.798 bits (325), Expect = 1.549e-32 Identity = 93/304 (30.59%), Postives = 147/304 (48.36%), Query Frame = 0
Query: 134 CNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPH--CTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVH-KKTHEGEKCFKCDLCPYSSISQRHLESHM--------------LIHTDQKP-FQCDQCDQSFRQKQLLKRHQNLYHNPN---YVPPPP 416
C++++ +L RH ++H+ E+P C C + F L+ H H+G KP+ C C S L +H R HTHE+P C C Y + + S+L H+R HTG+ P+ CPH C + LKRH+RIHTGEKPY C C + T ++L++H + +QC+LC R T L+ H +K H+S + C +C + + L H +K H + C C ++ + L +H+ L + P F+C C+ F ++ L H + +P+ + PP P
Sbjct: 96 CHFSSKYPQVLLRHERTHTGEKPFSCQECGKSFSRRDKLKTHSRVHSGEKPYACAECSYRAIDSSSLQKHRRV-HTHERPFACQLCPYKAKDSSQLTVHLRSHTGDSPFICPHEGCASSFKTNSDLKRHVRIHTGEKPYTCPYCDHKVTIKSNLESHISSNHRKAGGYQCKLCNFQTDRLTFLKEH-KKSHSSTL-LKCALCDFTSTTQMALSAHVRKKHGPKHLHHCSYCDFTCRWEGALSAHVNKKHGRSAGDSKTTLTKSLCNPNFRCHLCNAGFVREDSLSSHLRQHKSPSQGIFSPPLP 396 HSP 2 Score: 118.242 bits (295), Expect = 1.261e-28 Identity = 80/244 (32.79%), Postives = 118/244 (48.36%), Query Frame = 0
Query: 200 LVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQC--ELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVH-KKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHM 440
L+RH R HT EKP C EC S KLK H R H+GE+PY C C+Y + D+ L++H R+HT E+P+ C +C + S+ L H HTGD P F C E C ++ +DL+ HV ++HT ++P C C + L+ H H ++C LC + + L+ H H+ +C CD + + L H H P ++ H C C + R +G L H+
Sbjct: 106 LLRHER-THTGEKPFSCQECGKSFSRRDKLKTHSRVHSGEKPYACAECSYRAIDSSSLQKHRRVHTHERPFACQLCPYKAKDSSQLTVHLRSHTGDSP-FICPHEGCASSFKTNSDLKRHV-RIHTGEKPYTCPYCDHKVTIKSNLESHISSNHRKAGGYQCKLCNFQTDRLTFLKEHKKSHSSTL-LKCALCDFTSTTQMALSAHVRKKHGPKHL--------HHCSYCDFTCRWEGALSAHV 337 HSP 3 Score: 98.9821 bits (245), Expect = 3.484e-22 Identity = 78/266 (29.32%), Postives = 112/266 (42.11%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTE--CDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRI-HTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKC---------------FKCDLCPYSSISQRHLESHMLIH 378
C C + +R L H + HS E+P+ C+ C +SLQ H HT +P C+ C S +L H+R HT + P C C S S LKRH+R HTGE+PY CP+C + L+ H+ H Y+C +C+ + + LK H+ H+ + +C LC T + L HV+K H HC C + L H G F+C LC + + L SH+ H
Sbjct: 121 CQECGKSFSRRDKLKTHSRVHSGEKPYACAECSYRAIDSSSLQKHRRVHTHERPFACQLCPYKAKDSSQLTVHLR-SHTGDSPFICPHEGCASSFKTNSDLKRHVRIHTGEKPYTCPYCDHKVTIKSNLESHISSNHRKAGGYQCKLCNFQTDRLTFLKEHKKSHSST--LLKCALCDFTSTTQMALSAHVRKKHGPKHLHHCSYCDFTCRWEGALSAHVNKKHGRSAGDSKTTLTKSLCNPNFRCHLCNAGFVREDSLSSHLRQH 383
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000010052 (supercontig:LSalAtl2s:LSalAtl2s662:157810:165887:1 gene:EMLSAG00000010052 transcript:EMLSAT00000010052 description:"maker-LSalAtl2s662-augustus-gene-1.19") HSP 1 Score: 129.798 bits (325), Expect = 2.347e-31 Identity = 78/258 (30.23%), Postives = 124/258 (48.06%), Query Frame = 0
Query: 156 PHKCSVCERGFKTL--ASLQNHVNTH--TGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHL-RIH-TGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYH 407
P++C ER + TL ++ H H + +K ++C C+ L H+ H P +C CDY++ L + RH + H+ +P+ C C++ + L H+ RIH E+ C +C F L H+L H+ ++ F C++C K+ L H ++HT + + C++C S R L H KTH GEK F CD+C + I + L+ H +IH+ +KPF C C +K LK H H
Sbjct: 1711 PYQCP--ERPYWTLNKTRMRFHSKMHETSDSKNYKCPMCDITIKWKQGLRAHIICNHIKGPPFKCDLCDYTNDSLQPVLRHRKSHSEIKPFACSQCSHKTKTKKLLVAHIKRIHGRDEEKLPCSLCPKHFVSQRDLDLHQLSHSTEQK-FTCDICGFKTKYKSYLMTH-SRIHTG-QTLRCQLCSFSTLRRIHLDAHIKTHTGEKNFVCDVCKKAFIEKSQLKRHSVIHSGEKPFACHICPFRSNRKDKLKNHVTKKH 1963 HSP 2 Score: 114.39 bits (285), Expect = 1.808e-26 Identity = 72/252 (28.57%), Postives = 116/252 (46.03%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSH--SEERPHKCSVCERGFKTLASLQNH-VNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTG--ERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHM 375
+ C Y T + + H K H S+ + +KC +C+ K L+ H + H P +C C+ + ++RH R H+ KP C++C + + L H++ G E C C L H H+ E+ + CDIC + + L H IHTG +C+LC + R+ L H+ K HT ++ C +C K+F ++ LK H H GEK F C +CP+ S + L++H+
Sbjct: 1712 YQCPERPYWTLNKTRMRFHSKMHETSDSKNYKCPMCDITIKWKQGLRAHIICNHIKGPPFKCDLCDYTNDSLQPVLRH-RKSHSEIKPFACSQCSHKTKTKKLLVAHIKRIHGRDEEKLPCSLCPKHFVSQRDLDLHQLSHSTEQKFTCDICGFKTKYKSYLMTHSRIHTGQ--TLRCQLCSFSTLRRIHLDAHI-KTHTGEKNFVCDVCKKAFIEKSQLKRHSVIHSGEKPFACHICPFRSNRKDKLKNHV 1959 HSP 3 Score: 108.227 bits (269), Expect = 1.387e-24 Identity = 64/229 (27.95%), Postives = 102/229 (44.54%), Query Frame = 0
Query: 127 QKHMCNYCNYTTPKRYLLSRHMK-SHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVR-----------------------------YRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSD 325
+ + C C+ T + L H+ +H + P KC +C+ +L + H +H+ KP C C T LV H++ H+ E+ C C + + S L H R HTG+ +C C++++ L H++ HTGEK + CD+C F + + LK H +IH+G+KP F C +CP RK L+ HV K H ++
Sbjct: 1740 KNYKCPMCDITIKWKQGLRAHIICNHIKGPPFKCDLCDYTNDSLQPVLRHRKSHSEIKPFACSQCSHKTKTKKLLVAHIKRIHGRDEEKLPCSLCPKHFVSQRDLDLHQLSHSTEQKFTCDICGFKTKYKSYLMTHSRIHTGQ-TLRCQLCSFSTLRRIHLDAHIKTHTGEKNFVCDVCKKAFIEKSQLKRHSVIHSGEKP-FACHICPFRSNRKDKLKNHVTKKHGNE 1966
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000009081 (supercontig:LSalAtl2s:LSalAtl2s570:200913:204341:1 gene:EMLSAG00000009081 transcript:EMLSAT00000009081 description:"maker-LSalAtl2s570-snap-gene-1.23") HSP 1 Score: 122.865 bits (307), Expect = 4.055e-31 Identity = 56/134 (41.79%), Postives = 84/134 (62.69%), Query Frame = 0
Query: 159 CSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIH 292
C +C + + ++L+ H+ TH+G +P+RC C+ F+ + L H R H+ EKP C+ C+ + S + HMR H+GERPY+C C A D+ L +HLRIH+GEKPY+C +CH +F+QS +L H IH
Sbjct: 193 CGICGKTYARPSTLKTHMRTHSGERPYRCYDCDKSFSQAANLTAHCR-THSGEKPFHCSICNRKFSQSSSVTTHMRTHSGERPYRCRMCKKAFSDSSTLTKHLRIHSGEKPYQCKLCHLKFSQSGNLXRHMRIH 325 HSP 2 Score: 108.612 bits (270), Expect = 4.042e-26 Identity = 58/153 (37.91%), Postives = 85/153 (55.56%), Query Frame = 0
Query: 113 KVLKA-STKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIH 264
K+LK S+ S K++C C T + L HM++HS ERP++C C++ F A+L H TH+G KP C C F+ S + H+R H+ E+P+RC C + + S L +H+R H+GE+PYQC C + L RH+RIH
Sbjct: 174 KILKNPSSPDSSTDNTKNVCGICGKTYARPSTLKTHMRTHSGERPYRCYDCDKSFSQAANLTAHCRTHSGEKPFHCSICNRKFSQSSSVTTHMR-THSGERPYRCRMCKKAFSDSSTLTKHLRIHSGEKPYQCKLCHLKFSQSGNLXRHMRIH 325 HSP 3 Score: 95.1301 bits (235), Expect = 1.314e-21 Identity = 46/133 (34.59%), Postives = 74/133 (55.64%), Query Frame = 0
Query: 187 CKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQ 319
C C + L H+R H+ E+P+RC +CD S + + L H R H+GE+P+ C C + + H+R H+GE+PY C +C F+ S++L H IH+G+KP +QC+LC + +L H++
Sbjct: 193 CGICGKTYARPSTLKTHMR-THSGERPYRCYDCDKSFSQAANLTAHCRTHSGEKPFHCSICNRKFSQSSSVTTHMRTHSGERPYRCRMCKKAFSDSSTLTKHLRIHSGEKP-YQCKLCHLKFSQSGNLXRHMR 323 HSP 4 Score: 93.5893 bits (231), Expect = 5.039e-21 Identity = 50/159 (31.45%), Postives = 74/159 (46.54%), Query Frame = 0
Query: 248 TYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLY 406
TYA P T LK H+R H+GE+PY C C F+Q+ +L AH H+G+K P HC +C + F ++ H +TH GE+ ++C +C + L H+ IH+ +KP+QC C F Q L RH ++
Sbjct: 199 TYARPST--LKTHMRTHSGERPYRCYDCDKSFSQAANLTAHCRTHSGEK------------------------------PFHCSICNRKFSQSSSVTTHMRTHSGERPYRCRMCKKAFSDSSTLTKHLRIHSGEKPYQCKLCHLKFSQSGNLXRHMRIH 325 HSP 5 Score: 86.2705 bits (212), Expect = 1.406e-18 Identity = 45/143 (31.47%), Postives = 69/143 (48.25%), Query Frame = 0
Query: 301 CELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALH 443
C +C T R + L+ H+ + H+ +RP C C KSF L H +TH GEK F C +C + +HM H+ ++P++C C ++F L +H ++ EK ++C C F GNL RHM +H
Sbjct: 193 CGICGKTYARPSTLKTHM-RTHSGERPYRCYDCDKSFSQAANLTAHCRTHSGEKPFHCSICNRKFSQSSSVTTHMRTHSGERPYRCRMCKKAFSDSSTLTKHLRIH---------SGEKPYQCKLCHLKFSQSGNLXRHMRIH 325 HSP 6 Score: 71.633 bits (174), Expect = 9.572e-14 Identity = 42/147 (28.57%), Postives = 67/147 (45.58%), Query Frame = 0
Query: 330 CKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALK------IGRQRKIQIVNGQ 470
C +CGK++ TLK H +TH GE+ ++C C S +L +H H+ +KPF C C++ F Q + H + E+ + C C ++F L +H+ +H E Q K LK + R +I NG+
Sbjct: 193 CGICGKTYARPSTLKTHMRTHSGERPYRCYDCDKSFSQAANLTAHCRTHSGEKPFHCSICNRKFSQSSSVTTHMRTH---------SGERPYRCRMCKKAFSDSSTLTKHLRIHSGEKPYQCKLCHLKFSQSGNLXRHMRIHAQNGR 330
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000012096 (supercontig:LSalAtl2s:LSalAtl2s867:142067:146208:1 gene:EMLSAG00000012096 transcript:EMLSAT00000012096 description:"maker-LSalAtl2s867-augustus-gene-0.23") HSP 1 Score: 127.487 bits (319), Expect = 5.374e-31 Identity = 122/453 (26.93%), Postives = 185/453 (40.84%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHC--TYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKT-HEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHM--------------ALHDPESTAQEKAIALKIGRQRKIQIVN-GQAVEVF-TGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTS 564
C CN T ++ HM+ + C CE F L +H+ +C C + EL+ H R H+ ++ +E Y+C C T+ S + ++ R H+ EKPY C +C F++ L H+ IHTG++P FQCE+C T +K++L HV H + + CK+CG F R L H K H GEK KCD C S + H ++H+ IH+ KP+ C+ C + F + H+ + +K +EC CG F K +L+ HM ++ P+ A I +I + IVN GQ V V G D+ EED VG ES Y +++V+ E + + A + S A P ++ + S EA A S
Sbjct: 242 CQLCNITFDQKKQKIDHMRKAHRPPSYPCVRCEVDFTVKKELDDHLEYTDCGLQFKCFLCSYICRKTEELIIHQRESHSPQQ-----------IEEGPSINDQFIQHDPSEYKCDQCNRTFGSKQARGIHKN-RCHSNEKPYPCTLCPKTFSRKMGLIDHQRIHTGERP-FQCEMCGATFKQKSNLASHVDGTHLNVKRHRCKICGAMFKRRRLLDYHTKAKHTGEKPHKCDHCDASFVYPDHFKAHLRIHSGDKPYGCEICHRRFASRDNRNTHRFTHST---------KKQYECSVCGLGFMRKPHLLTHMKSAGHMLDDGNAEIIINTPKLPAH--LIPNQIDTESTTSIVNPGQIVGVVEQGTDDIAVVEEDS----------VGAESV-----------YYMMDVLDGNESKVQSAIISISNAGD----PLVSSMASSNEAVATAXKS 645 HSP 2 Score: 124.405 bits (311), Expect = 6.492e-30 Identity = 70/196 (35.71%), Postives = 102/196 (52.04%), Query Frame = 0
Query: 128 KHMCNYCNYTTPKRYLLSRHM-KSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRC-HTGERPYQCPHC--TYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQ 319
++ C+ CN T + H + HS E+P+ C++C + F L +H HTG +P +C+ C A F L HV H + K HRC C L H + HTGE+P++C HC ++ PD FK HLRIH+G+KPY C+ICH RF ++ HR H+ K ++C +C RK L H++
Sbjct: 341 EYKCDQCNRTFGSKQARGIHKNRCHSNEKPYPCTLCPKTFSRKMGLIDHQRIHTGERPFQCEMCGATFKQKSNLASHVDGTHLNVKRHRCKICGAMFKRRRLLDYHTKAKHTGEKPHKCDHCDASFVYPDHFKA--HLRIHSGDKPYGCEICHRRFASRDNRNTHRFTHSTKKQ-YECSVCGLGFMRKPHLLTHMK 533 HSP 3 Score: 112.849 bits (281), Expect = 3.434e-26 Identity = 75/213 (35.21%), Postives = 101/213 (47.42%), Query Frame = 0
Query: 84 EAGPSGVYDFDADDPGEFDDD-----FEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVN-THTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHC--TYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH 288
E GPS F DP E+ D F QA+G R + + C C T ++ L H + H+ ERP +C +C FK ++L +HV+ TH K HRCK C A F L H + +HT EKPH+C CD S V K H+R H+G++PY C C +AS D R H+ +K YEC +C F + L H
Sbjct: 325 EEGPSINDQFIQHDPSEYKCDQCNRTFGSKQARG----IHKNRCHSNEKPYPCTLCPKTFSRKMGLIDHQRIHTGERPFQCEMCGATFKQKSNLASHVDGTHLNVKRHRCKICGAMFKRRRLLDYHTKAKHTGEKPHKCDHCDASFVYPDHFKAHLRIHSGDKPYGCEICHRRFASRDNRNTHRF--THSTKKQYECSVCGLGFMRKPHLLTH 531
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000001251 (supercontig:LSalAtl2s:LSalAtl2s1202:85194:88065:1 gene:EMLSAG00000001251 transcript:EMLSAT00000001251 description:"maker-LSalAtl2s1202-snap-gene-0.44") HSP 1 Score: 120.553 bits (301), Expect = 8.409e-31 Identity = 66/167 (39.52%), Postives = 97/167 (58.08%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTH---------TGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH 288
C+ C+Y T L H ++HSE++P CS CE+ FK LA L+NH+ TH + +C+ C+ F+ S L +HV+ H+ KP+ C C++S+ + LK HMR HTGE+PY+C C Y + D L+RH HTGEKP++C C QS++L+ H
Sbjct: 86 CSICDYKTFYSKNLEVHSQTHSEDKPFLCSKCEKSFKQLAQLKNHMVTHLDKEKDVVPSWYAKKKCELCDKLFSDSKCLKKHVQAVHSKLKPYICQVCNHSTSRKAMLKMHMRQHTGEKPYECDICAYKTGDHNSLRRHKYRHTGEKPHKCKFCVYSTVQSSALRRH 252 HSP 2 Score: 86.2705 bits (212), Expect = 5.498e-19 Identity = 55/167 (32.93%), Postives = 81/167 (48.50%), Query Frame = 0
Query: 244 CPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVF-------QCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRH 402
C C Y + + L+ H + H+ +KP+ C C F Q LK H + H +K V +CELC L+ HVQ +H+ +P C++C S + LK+H + H GEK ++CD+C Y + L H HT +KP +C C S Q L+RH
Sbjct: 86 CSICDYKTFYSKNLEVHSQTHSEDKPFLCSKCEKSFKQLAQLKNHMVTHLDKEKDVVPSWYAKKKCELCDKLFSDSKCLKKHVQAVHSKLKPYICQVCNHSTSRKAMLKMHMRQHTGEKPYECDICAYKTGDHNSLRRHKYRHTGEKPHKCKFCVYSTVQSSALRRH 252 HSP 3 Score: 68.5514 bits (166), Expect = 5.284e-13 Identity = 34/97 (35.05%), Postives = 53/97 (54.64%), Query Frame = 0
Query: 112 GKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRH 208
K LK + ++ ++C CN++T ++ +L HM+ H+ E+P++C +C SL+ H HTG KPH+CKFC S L RHV +H
Sbjct: 161 SKCLKKHVQAVHSKLKPYICQVCNHSTSRKAMLKMHMRQHTGEKPYECDICAYKTGDHNSLRRHKYRHTGEKPHKCKFCVYSTVQSSALRRHVTTKH 257 HSP 4 Score: 62.003 bits (149), Expect = 7.257e-11 Identity = 63/235 (26.81%), Postives = 95/235 (40.43%), Query Frame = 0
Query: 232 HMRCHTGE------RPYQCPHCTYASPDTFKLKRHLRIHTGEK------PYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPM--------HCKMCGKSFPDRYTLKVH-KKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDP 445
H+ CHT E Y C C PD F + +H + C IC + S +L+ H H+ DKP F C C + + L+ H+ ++ + C++C K F D LK H + H K + C +C +S+ + L+ HM HT +KP++CD C L+RH+ + EK H+C C S L RH+ P
Sbjct: 38 HLLCHTNELEEGSASSYSCFKC----PDIFDKWGNCALHLWKTHGIDIGLLCCSICDYKTFYSKNLEVHSQTHSEDKP-FLCSKCEKSFKQLAQLKNHMVTHLDKEKDVVPSWYAKKKCELCDKLFSDSKCLKKHVQAVHSKLKPYICQVCNHSTSRKAMLKMHMRQHTGEKPYECDICAYKTGDHNSLRRHKYRH---------TGEKPHKCKFCVYSTVQSSALRRHVTTKHP 258 HSP 5 Score: 56.6102 bits (135), Expect = 4.964e-9 Identity = 57/201 (28.36%), Postives = 84/201 (41.79%), Query Frame = 0
Query: 275 CHARFTQSNSLKAHRLIHT-----GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHC-KMCG-KSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKP---------FQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIG 459
C F+Q + + H L HT G + C CP + + LH+ K H D + C +C K+F + L+VH +TH +K F C C S L++HM+ H D++ +C+ CD+ F + LK+H H+ K K + C C S K L HM H E + A K G
Sbjct: 26 CSYTFSQKD-YETHLLCHTNELEEGSASSYSCFKCPDIFDKWGNCALHLWKTHGIDIGLLCCSICDYKTFYSK-NLEVHSQTHSEDKPFLCSKCEKSFKQLAQLKNHMVTHLDKEKDVVPSWYAKKKCELCDKLFSDSKCLKKHVQAVHS--------KLKPYICQVCNHSTSRKAMLKMHMRQHTGEKPYECDICAYKTG 216 HSP 6 Score: 54.299 bits (129), Expect = 2.820e-8 Identity = 64/222 (28.83%), Postives = 88/222 (39.64%), Query Frame = 0
Query: 245 PHCTYASPDTFKLK---RHLRIHTGE------KPYECDICHARFTQSNSLKAHRL-IHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTH-EGEKCF--------KCDLCPYSSISQRHLESHM-LIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
P+C+Y TF K HL HT E Y C C F + + H H D + C +C +L +H Q H+ D+P C C KSF LK H TH + EK KC+LC + L+ H+ +H+ KP+ C C+ S +K +LK H + EK +EC C +L RH H E
Sbjct: 24 PNCSY----TFSQKDYETHLLCHTNELEEGSASSYSCFKCPDIFDKWGNCALHLWKTHGIDIGLLCCSICDYKTFYSKNLEVHSQ-THSEDKPFLCSKCEKSFKQLAQLKNHMVTHLDKEKDVVPSWYAKKKCELCDKLFSDSKCLKKHVQAVHSKLKPYICQVCNHSTSRKAMLKMHMRQH---------TGEKPYECDICAYKTGDHNSLRRHKYRHTGE 231
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000009059 (supercontig:LSalAtl2s:LSalAtl2s568:158020:159603:-1 gene:EMLSAG00000009059 transcript:EMLSAT00000009059 description:"maker-LSalAtl2s568-snap-gene-1.72") HSP 1 Score: 121.324 bits (303), Expect = 1.693e-30 Identity = 96/303 (31.68%), Postives = 137/303 (45.21%), Query Frame = 0
Query: 38 VLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDG--QEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKV-----LKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMK-SHSEERPHKCSVCERGFKTLASLQNHVNT-HTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMR-CHTGERPYQCPHCTYASPDTFKLKRHLR-IHTGEKPYECDICHARFTQSNSLKAH-RLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPM 328
VL G QTV I S + + L P G Q AGE E G G + F D + K L+A K V+ C+YC YT + LL +H + H++ERPHKC VC F ++NH+N+ H KP C+ C T G L +HV+ H EK C C + ++ HM H E+P+ CPHC+Y S L +H+R +H EKPY+C +C F Q L H + IH + P ++C C + G +L++H + H + P+
Sbjct: 6 VLTTNGSPHQTVEIQTSPHQT-YTTVPLSGAPLAGAHQVITAGEVEFTPGGHHGA-----------EKSFACDLCEXKFFQKVHLEAHVKNVHSKVKPFKCSYCTYTCSNKGLLDKHFRVVHNKERPHKCHVCGNRFGQKIHMENHINSVHIQDKPFHCESCSYKAATKGHLEKHVKTVHNKEKRFPCEICGNRFGQKIHMQNHMMAIHKKEKPFGCPHCSYRSSTKGMLDKHVRVVHNKEKPYKCLLCANTFGQKVHLDNHVKNIHNVENP-YKCIQCEASFGTMNNLKIHSKLAHDTLVPV 295 HSP 2 Score: 110.153 bits (274), Expect = 1.235e-26 Identity = 76/247 (30.77%), Postives = 117/247 (47.37%), Query Frame = 0
Query: 179 HTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMR-CHTGERPYQCPHCTYASPDTFKLKRHLR-IHTGEKPYECDICHARFTQSNSLKAH-RLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCG-----KSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHML-IHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPP 416
H K C CE F L HV+ H+ KP +C+ C Y+ L +H R H ERP++C C ++ H+ +H +KP+ C+ C + L+ H + +H +K F CE+C G+K ++ H+ +H ++P C C K D++ VH K EK +KC LC + + HL++H+ IH + P++C QC+ SF LK H L H+ VP PP
Sbjct: 57 HGAEKSFACDLCEXKFFQKVHLEAHVKNVHSKVKPFKCSYCTYTCSNKGLLDKHFRVVHNKERPHKCHVCGNRFGQKIHMENHINSVHIQDKPFHCESCSYKAATKGHLEKHVKTVHNKEKR-FPCEICGNRFGQKIHMQNHMMAIHKKEKPFGCPHCSYRSSTKGMLDKHVRVVHNK----EKPYKCLLCANTFGQKVHLDNHVKNIHNVENPYKCIQCEASFGTMNNLKIHSKLAHD-TLVPVPP 297 HSP 3 Score: 98.5969 bits (244), Expect = 9.129e-23 Identity = 73/276 (26.45%), Postives = 122/276 (44.20%), Query Frame = 0
Query: 196 TSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMR-CHTGERPYQCPHCTYASPDTFKLKRHLRI-HTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKT-HEGEKCFKCDLCPYSSISQRHLESHML-IHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMA-LHDPESTAQEKAIALKIGRQRKIQI 466
T+GE+ H EK C C+ + L+ H++ H+ +P++C +CTY + L +H R+ H E+P++C +C RF G+K + H+ +H D+P HC+ C + L+ H KT H EK F C++C + H+++HM+ IH +KPF C C K +L +H + HN KEK ++C C +F K +L H+ +H+ E+ + G ++I
Sbjct: 45 TAGEVEFTPGGHHGAEKSFACDLCEXKFFQKVHLEAHVKNVHSKVKPFKCSYCTYTCSNKGLLDKHFRVVHNKERPHKCHVCGNRF-----------------------------GQKIHMENHINSVHIQDKPFHCESCSYKAATKGHLEKHVKTVHNKEKRFPCEICGNRFGQKIHMQNHMMAIHKKEKPFGCPHCSYRSSTKGMLDKHVRVVHN--------KEKPYKCLLCANTFGQKVHLDNHVKNIHNVENPYKCIQCEASFGTMNNLKI 283
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|122132254|sp|Q08DG8.1|ZN135_BOVIN (RecName: Full=Zinc finger protein 135) HSP 1 Score: 219.164 bits (557), Expect = 1.232e-61 Identity = 120/316 (37.97%), Postives = 171/316 (54.11%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
C C L H ++H+ ERP++C C +GF+ ++L H HTG KP++C C F L++H R HT EKP+ C+EC S S +H R HTGE+PY C C A + L +HLRIHTGEKPY+C C F+ S+SL H+ IHTG+KP ++C+ C + T L H Q++HT +RP C CG++F L H++ H GEK + C+ C + L H HT +KP+ C QC ++FRQ L +HQ + EK +EC +CG++F H +L +H +H E
Sbjct: 215 CQECGKAFSHSLALIEHHRTHTGERPYECPECGKGFRNSSALTKHQRIHTGEKPYKCAQCGRTFNQIAPLIQHQR-THTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYTCSQCGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKP-YECQACGKAFTQITPLIQH-QRIHTGERPYECSECGRAFSQSTLLTEHRRIHTGEKPYGCNECGKAFSHSSSLSQHERTHTGEKPYACSQCGKAFRQSTHLTQHQRTHTG---------EKPYECSDCGKAFSHSSSLTKHQRIHTGE 518 HSP 2 Score: 207.994 bits (528), Expect = 1.655e-57 Identity = 121/318 (38.05%), Postives = 171/318 (53.77%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
+ C C T + L +H ++H+ E+P++CS C + F +S H THTG KP+ C C F S L +H+R HT EKP++C EC + S L +H R HTGE+PY+C C A L +H RIHTGE+PYEC C F+QS L HR IHTG+KP + C C + L H ++ HT ++P C CGK+F L H++TH GEK ++C C + L H IHT +KP++C++C ++F Q L +HQ ++ EK +EC +CGR+F LI H +H E
Sbjct: 269 YKCAQCGRTFNQIAPLIQHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYTCSQCGKAFRQSIHLTQHLRI-HTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECQACGKAFTQITPLIQHQRIHTGERPYECSECGRAFSQSTLLTEHRRIHTGEKP-YGCNECGKAFSHSSSLSQH-ERTHTGEKPYACSQCGKAFRQSTHLTQHQRTHTGEKPYECSDCGKAFSHSSSLTKHQRIHTGEKPYECNECGKAFSQLAPLIQHQRIHTG---------EKPYECNQCGRAFSQSSLLIEHQRIHTKE 574 HSP 3 Score: 206.838 bits (525), Expect = 3.217e-57 Identity = 120/346 (34.68%), Postives = 181/346 (52.31%), Query Frame = 0
Query: 120 KRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLY-------------------HNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
+R+ + + C+ C + R S+H ++H+ E+P+ CS C + F+ L H+ HTG KP++C C F+ S L +H R HT EKP+ C C + +++ L +H R HTGERPY+C C A + L H RIHTGEKPY C+ C F+ S+SL H HTG+KP + C C + T L H Q+ HT ++P C CGK+F +L H++ H GEK ++C+ C + L H IHT +KP++C+QC ++F Q LL HQ ++ + EK ++C +CG+SFR + +L +H +H E
Sbjct: 288 QRTHTGEKPYECSECGKSFSFRSSFSQHERTHTGEKPYTCSQCGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSLTKHQRI-HTGEKPYECQACGKAFTQITPLIQHQRIHTGERPYECSECGRAFSQSTLLTEHRRIHTGEKPYGCNECGKAFSHSSSLSQHERTHTGEKP-YACSQCGKAFRQSTHLTQH-QRTHTGEKPYECSDCGKAFSHSSSLTKHQRIHTGEKPYECNECGKAFSQLAPLIQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKPYGCNECGKSFSHSSSLSQHERTHTGEKPYDCQDCGKSFRQRTHLTQHQRIHTGE 630 HSP 4 Score: 203.371 bits (516), Expect = 6.441e-56 Identity = 118/337 (35.01%), Postives = 171/337 (50.74%), Query Frame = 0
Query: 112 GKVLKASTKRSQMVV-----QKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALH 443
GK + S +Q + + + C C L++H + H+ E+P++C C + F + L H HTG +P+ C C F+ S L H R HT EKP+ C EC + S L +H R HTGE+PY C C A + L +H R HTGEKPYEC C F+ S+SL H+ IHTG+KP ++C C + L H Q++HT ++P C CG++F L H++ H EK + C+ C S L H HT +KP+ C C +SFRQ+ L +HQ ++ EK +EC +CG++F H + I+H H
Sbjct: 331 GKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECQACGKAFTQITPLIQHQRIHTGERPYECSECGRAFSQSTLLTEHRRI-HTGEKPYGCNECGKAFSHSSSLSQHERTHTGEKPYACSQCGKAFRQSTHLTQHQRTHTGEKPYECSDCGKAFSHSSSLTKHQRIHTGEKP-YECNECGKAFSQLAPLIQH-QRIHTGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKPYGCNECGKSFSHSSSLSQHERTHTGEKPYDCQDCGKSFRQRTHLTQHQRIHTG---------EKPYECRDCGKAFTHSSSFIKHQRTH 655 HSP 5 Score: 163.696 bits (413), Expect = 7.048e-42 Identity = 96/249 (38.55%), Postives = 134/249 (53.82%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHT 379
C+ C + LL+ H + H+ E+P+ C+ C + F +SL H THTG KP+ C C F S L +H R HT EKP+ C++C + S L +H R HTGE+PY+C C A L +H RIHTGEKPYEC+ C F+QS+ L H+ IHT +KP + C C + + L H ++ HT ++P C+ CGKSF R L H++ H GEK ++C C + H HT
Sbjct: 411 CSECGRAFSQSTLLTEHRRIHTGEKPYGCNECGKAFSHSSSLSQHERTHTGEKPYACSQCGKAFRQSTHLTQHQR-THTGEKPYECSDCGKAFSHSSSLTKHQRIHTGEKPYECNECGKAFSQLAPLIQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKP-YGCNECGKSFSHSSSLSQH-ERTHTGEKPYDCQDCGKSFRQRTHLTQHQRIHTGEKPYECRDCGKAFTHSSSFIKHQRTHT 656 HSP 6 Score: 154.451 bits (389), Expect = 1.101e-38 Identity = 89/222 (40.09%), Postives = 126/222 (56.76%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEG 352
CN C LS+H ++H+ E+P+ CS C + F+ L H THTG KP+ C C F+ S L +H R HT EKP+ C EC + +L+ L +H R HTGE+PY+C C A + L H RIHT EKPY C+ C F+ S+SL H HTG+KP + C+ C + ++T L H Q++HT ++P C+ CGK+F + H++TH G
Sbjct: 439 CNECGKAFSHSSSLSQHERTHTGEKPYACSQCGKAFRQSTHLTQHQRTHTGEKPYECSDCGKAFSHSSSLTKHQRI-HTGEKPYECNECGKAFSQLAPLIQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRIHTKEKPYGCNECGKSFSHSSSLSQHERTHTGEKP-YDCQDCGKSFRQRTHLTQH-QRIHTGEKPYECRDCGKAFTHSSSFIKHQRTHTG 657 HSP 7 Score: 148.673 bits (374), Expect = 1.037e-36 Identity = 86/236 (36.44%), Postives = 121/236 (51.27%), Query Frame = 0
Query: 211 EKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
EKP+ C EC + L H R HTGERPY+CP C ++ L +H RIHTGEKPY+C C F Q L H+ HTG+KP ++C C + ++ H ++ HT ++P C CGK+F L H + H GEK ++C C + L H IHT +KP++C C ++F Q L +HQ ++ E+ +EC ECGR+F L H +H E
Sbjct: 210 EKPYGCQECGKAFSHSLALIEHHRTHTGERPYECPECGKGFRNSSALTKHQRIHTGEKPYKCAQCGRTFNQIAPLIQHQRTHTGEKP-YECSECGKSFSFRSSFSQH-ERTHTGEKPYTCSQCGKAFRQSIHLTQHLRIHTGEKPYQCGECGKAFSHSSSLTKHQRIHTGEKPYECQACGKAFTQITPLIQHQRIHTG---------ERPYECSECGRAFSQSTLLTEHRRIHTGE 434 HSP 8 Score: 124.02 bits (310), Expect = 1.731e-28 Identity = 74/188 (39.36%), Postives = 99/188 (52.66%), Query Frame = 0
Query: 112 GKVLKAST-----KRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTG 294
GK + ST +R+ + + C+ C L++H + H+ E+P++C+ C + F LA L H HTG KP+ C C F+ S L+ H R HT EKP+ C EC S S L +H R HTGE+PY C C + L +H RIHTGEKPYEC C FT S+S H+ HTG
Sbjct: 471 GKAFRQSTHLTQHQRTHTGEKPYECSDCGKAFSHSSSLTKHQRIHTGEKPYECNECGKAFSQLAPLIQHQRIHTGEKPYECNQCGRAFSQSSLLIEHQRI-HTKEKPYGCNECGKSFSHSSSLSQHERTHTGEKPYDCQDCGKSFRQRTHLTQHQRIHTGEKPYECRDCGKAFTHSSSFIKHQRTHTG 657 HSP 9 Score: 74.3294 bits (181), Expect = 1.350e-12 Identity = 52/184 (28.26%), Postives = 77/184 (41.85%), Query Frame = 0
Query: 267 EKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQ 450
EKPY C C F+ S +L H HTG+ RP C CGK F + L H++ H GEK +KC C + L H HT +KP++C +C +SF + +H+ + EK + C +CG++FR +L +H+ +H E Q
Sbjct: 210 EKPYGCQECGKAFSHSLALIEHHRTHTGE------------------------------RPYECPECGKGFRNSSALTKHQRIHTGEKPYKCAQCGRTFNQIAPLIQHQRTHTGEKPYECSECGKSFSFRSSFSQHERTHTG---------EKPYTCSQCGKAFRQSIHLTQHLRIHTGEKPYQ 354 HSP 10 Score: 70.4774 bits (171), Expect = 2.076e-11 Identity = 49/160 (30.63%), Postives = 77/160 (48.12%), Query Frame = 0
Query: 319 QKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGE 478
QK ++P C+ CGK+F L H +TH GE+ ++C C + L H IHT +KP++C QC ++F Q L +HQ + EK +EC ECG+SF + + +H H T ++ + G+ + I Q + + TGE
Sbjct: 204 QKTCAKEKPYGCQECGKAFSHSLALIEHHRTHTGERPYECPECGKGFRNSSALTKHQRIHTGEKPYKCAQCGRTFNQIAPLIQHQRTHTG---------EKPYECSECGKSFSFRSSFSQHERTH----TGEKPYTCSQCGKAFRQSIHLTQHLRIHTGE 350
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|20141015|sp|Q96RE9.1|ZN300_HUMAN (RecName: Full=Zinc finger protein 300) HSP 1 Score: 217.238 bits (552), Expect = 2.541e-61 Identity = 132/363 (36.36%), Postives = 185/363 (50.96%), Query Frame = 0
Query: 88 SGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQ 450
+GV FD + G + F Q+ + TK V C C K+ L H + H+ ++P+ C C + F L H THTG KP+ C C F+ L+ H R HT EKP+ C+EC + + S L H R HTGE+PY+C C A +L H R HTGEKPYEC C F + + L H+ IHTG+KP ++C C RKT+L H Q +HT ++P C CGK+F + L +H++TH GEK +KC C + + HL H IHT +KP+ C +C ++F QK L HQ ++ EK + C ECG++F K +L+ H +H E Q
Sbjct: 236 NGVIPFDDNQCG---NVFRNTQSLIQYQNVETKEKSCV-----CVTCGKAFAKKSQLIVHQRIHTGKKPYDCGACGKAFSEKFHLVVHQRTHTGEKPYDCSECGKAFSQKSSLIIHQRV-HTGEKPYECSECGKAFSQKSPLIIHQRIHTGEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYECTECGKAFCEKSHLIIHKRIHTGEKP-YKCAQCEEAFSRKTELITH-QLVHTGEKPYECTECGKTFSRKSQLIIHQRTHTGEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFSQKSHLPGHQRIH---------TGEKPYICAECGKAFSQKSDLVLHQRIHTGERPYQ 578 HSP 2 Score: 216.468 bits (550), Expect = 4.458e-61 Identity = 123/336 (36.61%), Postives = 181/336 (53.87%), Query Frame = 0
Query: 116 KASTKRSQMVVQKHM--------CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALH 443
KA K+SQ++V + + C C +++ L H ++H+ E+P+ CS C + F +SL H HTG KP+ C C F+ L+ H R HT EKP+ C EC + + S+L H R HTGE+PY+C C A + L H RIHTGEKPY+C C F++ L H+L+HTG+KP ++C C T RK+ L +H Q+ HT ++P C CGK+F + L H++ H GEK + C C + + HL H IHT +KP+ C +C ++F QK L HQ ++ E+ ++C CG++F K L H +H
Sbjct: 276 KAFAKKSQLIVHQRIHTGKKPYDCGACGKAFSEKFHLVVHQRTHTGEKPYDCSECGKAFSQKSSLIIHQRVHTGEKPYECSECGKAFSQKSPLIIHQRI-HTGEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYECTECGKAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTELITHQLVHTGEKP-YECTECGKTFSRKSQLIIH-QRTHTGEKPYKCSECGKAFCQKSHLIGHQRIHTGEKPYICTECGKAFSQKSHLPGHQRIHTGEKPYICAECGKAFSQKSDLVLHQRIH---------TGERPYQCAICGKAFIQKSQLTVHQRIH 599 HSP 3 Score: 171.4 bits (433), Expect = 9.712e-45 Identity = 101/273 (37.00%), Postives = 145/273 (53.11%), Query Frame = 0
Query: 174 NHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
N H G P C F + L+++ T EK C C + + S+L H R HTG++PY C C A + F L H R HTGEKPY+C C F+Q +SL H+ +HTG+KP ++C C +K+ L +H Q++HT ++P C+ CGK+F + L +H + H GEK ++C C + + HL H IHT +KP++C QC+++F +K L HQ L H EK +EC ECG++F K LI H H E
Sbjct: 230 NLEKIHNGVIPFDDNQCGNVFRNTQSLIQYQNVE-TKEKSCVCVTCGKAFAKKSQLIVHQRIHTGKKPYDCGACGKAFSEKFHLVVHQRTHTGEKPYDCSECGKAFSQKSSLIIHQRVHTGEKP-YECSECGKAFSQKSPLIIH-QRIHTGEKPYECRECGKAFSQKSQLIIHHRAHTGEKPYECTECGKAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTELITHQ-LVHTG--------EKPYECTECGKTFSRKSQLIIHQRTHTGE 490 HSP 4 Score: 124.02 bits (310), Expect = 1.425e-28 Identity = 70/186 (37.63%), Postives = 96/186 (51.61%), Query Frame = 0
Query: 116 KASTKRSQMVVQKHM--------CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT 293
KA ++S +++ K + C C ++ L H H+ E+P++C+ C + F + L H THTG KP++C C F L+ H R HT EKP+ CTEC + + S L H R HTGE+PY C C A L H RIHTGE+PY+C IC F Q + L H+ IHT
Sbjct: 416 KAFCEKSHLIIHKRIHTGEKPYKCAQCEEAFSRKTELITHQLVHTGEKPYECTECGKTFSRKSQLIIHQRTHTGEKPYKCSECGKAFCQKSHLIGHQRI-HTGEKPYICTECGKAFSQKSHLPGHQRIHTGEKPYICAECGKAFSQKSDLVLHQRIHTGERPYQCAICGKAFIQKSQLTVHQRIHT 600
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|74758686|sp|Q6ZMW2.1|ZN782_HUMAN (RecName: Full=Zinc finger protein 782) HSP 1 Score: 219.164 bits (557), Expect = 2.635e-61 Identity = 119/313 (38.02%), Postives = 174/313 (55.59%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALH 443
C C ++ L +H ++H+ E+P+KC C++ F + L+ H THTG KP C C F L+ H R HT EKP C EC S +S L+ H R HTGERPY+C C A L++H R HTGEKPY+C+ C F Q + L+ H IHTG+KP ++C C +K++LR+H + HT ++P C+ CGK+F + L+ H++TH GEK ++C+ C + + L H HT +KP+ C+QC ++F QK L+ HQ + EK ++C +CGR+F K +L H H
Sbjct: 396 CPECGKAFSEKSRLRKHQRTHTGEKPYKCDGCDKAFSAKSGLRIHQRTHTGEKPFECHECGKSFNYKSILIVHQR-THTGEKPFECNECGKSFSHMSGLRNHRRTHTGERPYKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHHRIHTGEKP-YKCNHCGEAFSQKSNLRVH-HRTHTGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECGKAFSEKSVLRKHQRTHTGEKPYNCNQCGEAFSQKSNLRVHQRTH---------TGEKPYKCDKCGRTFSQKSSLREHQKAH 696 HSP 2 Score: 205.297 bits (521), Expect = 2.703e-56 Identity = 111/298 (37.25%), Postives = 166/298 (55.70%), Query Frame = 0
Query: 149 KSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
KSH+ E+P++C C + F + L+ H THTG KP++C C+ F+ L H R HT EKP C EC S S L H R HTGE+P++C C + L+ H R HTGE+PY+CD C F + L+ H HTG+KP ++C C G+K+ LR H ++HT ++P C CG++F + L+VH +TH GEK ++C+ C + + +L H HT +KP++C++C ++F +K +L++HQ + EK + C +CG +F K NL H H E
Sbjct: 386 KSHTGEKPYECPECGKAFSEKSRLRKHQRTHTGEKPYKCDGCDKAFSAKSGLRIHQR-THTGEKPFECHECGKSFNYKSILIVHQRTHTGEKPFECNECGKSFSHMSGLRNHRRTHTGERPYKCDECGKAFKLKSGLRKHHRTHTGEKP-YKCNQCGKAFGQKSQLRGH-HRIHTGEKPYKCNHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECGKAFSEKSVLRKHQRTH---------TGEKPYNCNQCGEAFSQKSNLRVHQRTHTGE 671 HSP 3 Score: 187.578 bits (475), Expect = 6.114e-50 Identity = 111/313 (35.46%), Postives = 165/313 (52.72%), Query Frame = 0
Query: 134 CNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
C T + S H K H +P++ + C + + L +HTG KP+ C C F+ L +H R HT EKP++C CD + S L+ H R HTGE+P++C C + L H R HTGEKP+EC+ C F+ + L+ HR HTG++P ++C+ C K+ LR H + HT ++P C CGK+F + L+ H + H GEK +KC+ C + + +L H HT +KP+QC++C ++FRQK L+ HQ + EK +EC ECG++F K L +H H E
Sbjct: 343 CTETFSYQSTFSVHQKVHIRAKPYEYNECGKSCSMNSHLIWPQKSHTGEKPYECPECGKAFSEKSRLRKHQR-THTGEKPYKCDGCDKAFSAKSGLRIHQRTHTGEKPFECHECGKSFNYKSILIVHQRTHTGEKPFECNECGKSFSHMSGLRNHRRTHTGERP-YKCDECGKAFKLKSGLRKH-HRTHTGEKPYKCNQCGKAFGQKSQLRGHHRIHTGEKPYKCNHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGHQRTH---------TGEKPYECNECGKAFSEKSVLRKHQRTHTGE 643 HSP 4 Score: 177.563 bits (449), Expect = 2.051e-46 Identity = 106/303 (34.98%), Postives = 156/303 (51.49%), Query Frame = 0
Query: 144 LSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
L H ++H+ ++ C F ++ H H KP+ C + + L+ + HT EKP+ C EC + E S+L++H R HTGE+PY+C C A L+ H R HTGEKP+EC C F + L H+ HTG+KP F+C C + + LR H ++ HT +RP C CGK+F + L+ H +TH GEK +KC+ C + + L H IHT +KP++C+ C ++F QK L+ H + EK ++C ECG++FR K NL H H E
Sbjct: 325 LPVHQRTHATDKYSDYHPCTETFSYQSTFSVHQKVHIRAKPYEYNECGKSCSMNSHLIWPQK-SHTGEKPYECPECGKAFSEKSRLRKHQRTHTGEKPYKCDGCDKAFSAKSGLRIHQRTHTGEKPFECHECGKSFNYKSILIVHQRTHTGEKP-FECNECGKSFSHMSGLRNH-RRTHTGERPYKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHHRIHTGEKPYKCNHCGEAFSQKSNLRVHHRTH---------TGEKPYQCEECGKTFRQKSNLRGHQRTHTGE 615 HSP 5 Score: 168.318 bits (425), Expect = 3.242e-43 Identity = 88/223 (39.46%), Postives = 128/223 (57.40%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGE 353
CN C + L H ++H+ ERP+KC C + FK + L+ H THTG KP++C C F +L H R HT EKP++C C + + S L+ H R HTGE+PYQC C L+ H R HTGEKPYEC+ C F++ + L+ H+ HTG+KP + C C +K++LR+H Q+ HT ++P C CG++F + +L+ H+K H G+
Sbjct: 480 CNECGKSFSHMSGLRNHRRTHTGERPYKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHHRI-HTGEKPYKCNHCGEAFSQKSNLRVHHRTHTGEKPYQCEECGKTFRQKSNLRGHQRTHTGEKPYECNECGKAFSEKSVLRKHQRTHTGEKP-YNCNQCGEAFSQKSNLRVH-QRTHTGEKPYKCDKCGRTFSQKSSLREHQKAHPGD 699 HSP 6 Score: 165.236 bits (417), Expect = 3.039e-42 Identity = 101/287 (35.19%), Postives = 146/287 (50.87%), Query Frame = 0
Query: 164 RGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQ 450
+ F ++L H TH K C F+ H + H KP+ EC S S L + HTGE+PY+CP C A + +L++H R HTGEKPY+CD C F+ + L+ H+ HTG+KP F+C C + K+ L +H Q+ HT ++P C CGKSF L+ H++TH GE+ +KCD C + + L H HT +KP++C+QC ++F QK L+ H ++ EK ++C CG +F K NL H H E Q
Sbjct: 317 KSFNRNSTLPVHQRTHATDKYSDYHPCTETFSYQSTFSVHQKV-HIRAKPYEYNECGKSCSMNSHLIWPQKSHTGEKPYECPECGKAFSEKSRLRKHQRTHTGEKPYKCDGCDKAFSAKSGLRIHQRTHTGEKP-FECHECGKSFNYKSILIVH-QRTHTGEKPFECNECGKSFSHMSGLRNHRRTHTGERPYKCDECGKAFKLKSGLRKHHRTHTGEKPYKCNQCGKAFGQKSQLRGHHRIH---------TGEKPYKCNHCGEAFSQKSNLRVHHRTHTGEKPYQ 591 HSP 7 Score: 121.324 bits (303), Expect = 1.455e-27 Identity = 84/278 (30.22%), Postives = 128/278 (46.04%), Query Frame = 0
Query: 222 SSVELSKLKRHMRCHTGERPY---------------QCPHCT--------------YASPDTFKLKRHLRI------------------------HTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
S + S ++ H R H G +P+ Q H T Y S + K H+R HTGEKPYEC C F++ + L+ H+ HTG+KP ++C+ C K+ LR+H Q+ HT ++P C CGKSF + L VH++TH GEK F+C+ C S L +H HT ++P++CD+C ++F+ K L++H + EK ++C +CG++F K L H +H E
Sbjct: 293 SFSQKSHIREHHRVHIGVKPFEYGKSFNRNSTLPVHQRTHATDKYSDYHPCTETFSYQSTFSVHQKVHIRAKPYEYNECGKSCSMNSHLIWPQKSHTGEKPYECPECGKAFSEKSRLRKHQRTHTGEKP-YKCDGCDKAFSAKSGLRIH-QRTHTGEKPFECHECGKSFNYKSILIVHQRTHTGEKPFECNECGKSFSHMSGLRNHRRTHTGERPYKCDECGKAFKLKSGLRKHHRTH---------TGEKPYKCNQCGKAFGQKSQLRGHHRIHTGE 559
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|3219985|sp|Q07230.1|ZSCA2_MOUSE (RecName: Full=Zinc finger and SCAN domain-containing protein 2; AltName: Full=Zinc finger protein 29; Short=Zfp-29) HSP 1 Score: 216.853 bits (551), Expect = 3.465e-61 Identity = 120/316 (37.97%), Postives = 166/316 (52.53%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
C C + + L H ++H+ E+P+ C C + F +SL H HTG KP+ CK C F+ + L+RH R HT EKP++CTEC + S L H R HTGE+PYQC C + L H R H EKPY+C +C F+QS+SL AH+ HTG+KP ++C C + ++L H Q+ HT ++P C CGK F R L VH++TH GEK +KC +C S L H H KP++C +C + F +L HQ ++ EK + CPECG+ F + N I H H E
Sbjct: 308 CAECGKSFSRSPNLIAHQRTHTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEKPYACKECGESFSYNSNLIRHQRI-HTGEKPYKCTECGQKFSQSSALITHRRTHTGEKPYQCGECGKNFSRSSNLATHRRTHLVEKPYKCGLCGKSFSQSSSLIAHQGTHTGEKP-YECLTCGESFSWSSNLIKH-QRTHTGEKPYRCGDCGKGFSQRSQLVVHQRTHTGEKPYKCLMCGKSFSRGSILVMHQRAHLGDKPYRCPECGKGFSWNSVLIIHQRIHTG---------EKPYRCPECGKGFSNSSNFITHQRTHLKE 611 HSP 2 Score: 209.149 bits (531), Expect = 2.781e-58 Identity = 120/324 (37.04%), Postives = 167/324 (51.54%), Query Frame = 0
Query: 120 KRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALH 443
+R+ + + C+ C + SRH +H+ E+P+KC C + F A+L H HTG KP +C C F+ S L+ H R HT EKP+ C EC S S L H HTGE+PY C C + L RH RIHTGEKPY+C C +F+QS++L HR HTG+KP +QC C R ++L H ++ H ++P C +CGKSF +L H+ TH GEK ++C C S +L H HT +KP++C C + F Q+ L HQ + EK ++C CG+SF L+ H H
Sbjct: 241 ERTHTGEKYYKCDECGKSFSDGSNFSRHQTTHTGEKPYKCRDCGKSFSRSANLITHQRIHTGEKPFQCAECGKSFSRSPNLIAHQR-THTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEKPYACKECGESFSYNSNLIRHQRIHTGEKPYKCTECGQKFSQSSALITHRRTHTGEKP-YQCGECGKNFSRSSNLATH-RRTHLVEKPYKCGLCGKSFSQSSSLIAHQGTHTGEKPYECLTCGESFSWSSNLIKHQRTHTGEKPYRCGDCGKGFSQRSQLVVHQRTHTG---------EKPYKCLMCGKSFSRGSILVMHQRAH 552 HSP 3 Score: 201.445 bits (511), Expect = 1.476e-55 Identity = 144/499 (28.86%), Postives = 226/499 (45.29%), Query Frame = 0
Query: 3 VVSEDAPETVPAPKAPSRASTR----ATAPSGATAENRVVLNAG-----GDQFQTVHIVPSDTG---------SNEVSYVLI-------------VQPPDGQEAKAGEAEDGEAGPSGVY-DFDADDPGE---FDDDFEMDQAKG-----------KVLKASTKRSQMVV---------QKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
V+ ED PE+ P P++ + S + A P GA R + + Q + ++P + S+E + L+ +Q +G+ + E E+ G++ + + G+ D DFE D G +V+ + + ++ + + C C T ++ L H ++H+ E+ +KC C + F ++ H THTG KP++C+ C F+ S L+ H R HT EKP +C EC S L H R HTGE+PY CP C + + L H IHTGEKPY C C F+ +++L H+ IHTG+KP ++C C + + L H ++ HT ++P C CGK+F L H++TH EK +KC LC S L +H HT +KP++C C +SF L +HQ + EK + C +CG+ F + L+ H H E
Sbjct: 43 VLQEDGPESEPFPQSAGKGSPQEEDAAEGPQGALVRFRELCRRWLRPEVHTKEQMLTVLPREIQAWLQEHRPESSEEAVALVEDLTQTFRHSDFEIQSENGENSNEDMFEGVES--HGMFLNISGGEGGQQSDGDSDFERDCGSGGAQGHAPGEDPRVVPSEGREVGQLIGLQGTYLGEKPYECPQCGKTFSRKSHLITHERTHTGEKYYKCDECGKSFSDGSNFSRHQTTHTGEKPYKCRDCGKSFSRSANLITHQRI-HTGEKPFQCAECGKSFSRSPNLIAHQRTHTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEKPYACKECGESFSYNSNLIRHQRIHTGEKP-YKCTECGQKFSQSSALITH-RRTHTGEKPYQCGECGKNFSRSSNLATHRRTHLVEKPYKCGLCGKSFSQSSSLIAHQGTHTGEKPYECLTCGESFSWSSNLIKHQRTHTG---------EKPYRCGDCGKGFSQRSQLVVHQRTHTGE 527 HSP 4 Score: 174.096 bits (440), Expect = 9.823e-46 Identity = 99/287 (34.49%), Postives = 147/287 (51.22%), Query Frame = 0
Query: 120 KRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLY 406
+R+ + + C C + R L+ H H+ E+P+ C C F ++L H HTG KP++C C F+ S L+ H R HT EKP++C EC + S L H R H E+PY+C C + + L H HTGEKPYEC C F+ S++L H+ HTG+KP ++C C +++ L +H Q+ HT ++P C MCGKSF L +H++ H G+K ++C C L H IHT +KP++C +C + F HQ +
Sbjct: 325 QRTHTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEKPYACKECGESFSYNSNLIRHQRIHTGEKPYKCTECGQKFSQSSALITH-RRTHTGEKPYQCGECGKNFSRSSNLATHRRTHLVEKPYKCGLCGKSFSQSSSLIAHQGTHTGEKPYECLTCGESFSWSSNLIKHQRTHTGEKP-YRCGDCGKGFSQRSQLVVH-QRTHTGEKPYKCLMCGKSFSRGSILVMHQRAHLGDKPYRCPECGKGFSWNSVLIIHQRIHTGEKPYRCPECGKGFSNSSNFITHQRTH 608 HSP 5 Score: 164.851 bits (416), Expect = 1.945e-42 Identity = 91/256 (35.55%), Postives = 134/256 (52.34%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPF 384
+ C C + L RH + H+ E+P+KC+ C + F ++L H THTG KP++C C F+ S L H R H EKP++C C S + S L H HTGE+PY+C C + + L +H R HTGEKPY C C F+Q + L H+ HTG+KP ++C +C + R + L +H Q+ H D+P C CGK F L +H++ H GEK ++C C + + +H H +K +
Sbjct: 362 YACKECGESFSYNSNLIRHQRIHTGEKPYKCTECGQKFSQSSALITHRRTHTGEKPYQCGECGKNFSRSSNLATH-RRTHLVEKPYKCGLCGKSFSQSSSLIAHQGTHTGEKPYECLTCGESFSWSSNLIKHQRTHTGEKPYRCGDCGKGFSQRSQLVVHQRTHTGEKP-YKCLMCGKSFSRGSILVMH-QRAHLGDKPYRCPECGKGFSWNSVLIIHQRIHTGEKPYRCPECGKGFSNSSNFITHQRTHLKEKLY 614 HSP 6 Score: 143.665 bits (361), Expect = 4.101e-35 Identity = 84/230 (36.52%), Postives = 118/230 (51.30%), Query Frame = 0
Query: 225 ELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHL----RIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQ 450
E+ +L + GE+PY+CP C TF K HL R HTGEK Y+CD C F+ ++ H+ HTG+KP ++C C + R +L H Q++HT ++P C CGKSF L H++TH GEK + C C S ++ L +H IHT +KP+ C +C +SF L RHQ ++ EK ++C ECG+ F LI H H E Q
Sbjct: 205 EVGQLIGLQGTYLGEKPYECPQCG----KTFSRKSHLITHERTHTGEKYYKCDECGKSFSDGSNFSRHQTTHTGEKP-YKCRDCGKSFSRSANLITH-QRIHTGEKPFQCAECGKSFSRSPNLIAHQRTHTGEKPYSCPECGKSFGNRSSLNTHQGIHTGEKPYACKECGESFSYNSNLIRHQRIHTG---------EKPYKCTECGQKFSQSSALITHRRTHTGEKPYQ 419 HSP 7 Score: 122.094 bits (305), Expect = 6.039e-28 Identity = 66/180 (36.67%), Postives = 94/180 (52.22%), Query Frame = 0
Query: 117 ASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDK 296
A+ +R+ +V + + C C + + L H +H+ E+P++C C F ++L H THTG KP+RC C F+ +LV H R HT EKP++C C S S L H R H G++PY+CP C L H RIHTGEKPY C C F+ S++ H+ H +K
Sbjct: 434 ATHRRTHLVEKPYKCGLCGKSFSQSSSLIAHQGTHTGEKPYECLTCGESFSWSSNLIKHQRTHTGEKPYRCGDCGKGFSQRSQLVVHQR-THTGEKPYKCLMCGKSFSRGSILVMHQRAHLGDKPYRCPECGKGFSWNSVLIIHQRIHTGEKPYRCPECGKGFSNSSNFITHQRTHLKEK 612
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|150387825|sp|P08043.2|ZFP2_MOUSE (RecName: Full=Zinc finger protein 2; Short=Zfp-2; AltName: Full=Protein mKR2) HSP 1 Score: 213.001 bits (541), Expect = 3.616e-61 Identity = 118/322 (36.65%), Postives = 178/322 (55.28%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQ 450
+ CN C+ +R L+ H ++H+ E+P+KC C + F +L H THTG KP++CK C F + L++H R HT EKP++C +C + + L H R HTGE+PY+C C A + L H R HTGEKPYEC C F++S++L H+ HTG+KP ++C C + + T L H Q+LH+ +P C CGK+F +L H++ H GEK ++C +C + L H +IHT +KP++C +C ++F Q L HQ ++ EK +EC +CG++F +LI H +H E Q
Sbjct: 128 YTCNVCDKHFIERSSLTVHQRTHTGEKPYKCHECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFRKNSSLIQHERI-HTGEKPYKCHDCGKAFTQSMNLTVHQRTHTGEKPYECNQCGKAFSQSMHLIVHQRSHTGEKPYECSECGKAFSKSSTLTLHQRNHTGEKP-YKCNKCGKSFSQSTYLIEH-QRLHSGVKPFECNQCGKAFSKNSSLTQHRRIHTGEKPYECMICGKHFTGRSSLTVHQVIHTGEKPYECTECGKAFSQSAYLIEHQRIH---------TGEKPYECDQCGKAFIKNSSLIVHQRIHTGEKPYQ 437 HSP 2 Score: 211.075 bits (536), Expect = 2.082e-60 Identity = 127/329 (38.60%), Postives = 178/329 (54.10%), Query Frame = 0
Query: 120 KRSQMVVQKHM--CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
K S+M VQK + C+ C T + L +H + H+ E+P+ C+VC++ F +SL H THTG KP++C C F+ S L H R HT EKP++C EC + + S L +H R HTGE+PY+C C A + L H R HTGEKPYEC+ C F+QS L H+ HTG+KP ++C C + + L LH Q+ HT ++P C CGKSF L H++ H G K F+C+ C + L H IHT +KP++C C + F + L HQ ++ EK +EC ECG++F LI H +H E
Sbjct: 89 KTSRMFVQKKVYGCDECGKTFRQSSSLLKHQRIHTGEKPYTCNVCDKHFIERSSLTVHQRTHTGEKPYKCHECGKAFSQSMNLTVHQR-THTGEKPYQCKECGKAFRKNSSLIQHERIHTGEKPYKCHDCGKAFTQSMNLTVHQRTHTGEKPYECNQCGKAFSQSMHLIVHQRSHTGEKP-YECSECGKAFSKSSTLTLH-QRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNQCGKAFSKNSSLTQHRRIHTGEKPYECMICGKHFTGRSSLTVHQVIH---------TGEKPYECTECGKAFSQSAYLIEHQRIHTGE 405 HSP 3 Score: 207.994 bits (528), Expect = 2.545e-59 Identity = 117/313 (37.38%), Postives = 170/313 (54.31%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALH 443
C+ C + L+ H ++H+ E+P++C C + F+ +SL H HTG KP++C C FT S L H R HT EKP+ C +C + + L H R HTGE+PY+C C A + L H R HTGEKPY+C+ C F+QS L H+ +H+G KP F+C C + + L H +++HT ++P C +CGK F R +L VH+ H GEK ++C C + +L H IHT +KP++CDQC ++F + L HQ ++ EK ++C ECG+SF NL RH H
Sbjct: 158 CHECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFRKNSSLIQHERIHTGEKPYKCHDCGKAFTQSMNLTVHQR-THTGEKPYECNQCGKAFSQSMHLIVHQRSHTGEKPYECSECGKAFSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGVKP-FECNQCGKAFSKNSSLTQH-RRIHTGEKPYECMICGKHFTGRSSLTVHQVIHTGEKPYECTECGKAFSQSAYLIEHQRIHTGEKPYECDQCGKAFIKNSSLIVHQRIH---------TGEKPYQCNECGKSFSRSTNLTRHQRTH 458 HSP 4 Score: 194.126 bits (492), Expect = 3.965e-54 Identity = 107/275 (38.91%), Postives = 156/275 (56.73%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQ 403
+ C C K L +H + H+ E+P+KC C + F +L H THTG KP+ C C F+ S L+ H R HT EKP+ C+EC + + S L H R HTGE+PY+C C + + L H R+H+G KP+EC+ C F++++SL HR IHTG+KP ++C +C ++ L +H Q +HT ++P C CGK+F L H++ H GEK ++CD C + I L H IHT +KP+QC++C +SF + L RHQ
Sbjct: 184 YQCKECGKAFRKNSSLIQHERIHTGEKPYKCHDCGKAFTQSMNLTVHQRTHTGEKPYECNQCGKAFSQSMHLIVHQR-SHTGEKPYECSECGKAFSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNQCGKAFSKNSSLTQHRRIHTGEKP-YECMICGKHFTGRSSLTVH-QVIHTGEKPYECTECGKAFSQSAYLIEHQRIHTGEKPYECDQCGKAFIKNSSLIVHQRIHTGEKPYQCNECGKSFSRSTNLTRHQ 455 HSP 5 Score: 192.586 bits (488), Expect = 1.411e-53 Identity = 113/318 (35.53%), Postives = 168/318 (52.83%), Query Frame = 0
Query: 131 CNYCNYT--TPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
CN+ +Y + + L + + +++ + C C + F+ +SL H HTG KP+ C C+ F L H R HT EKP++C EC + + L H R HTGE+PYQC C A L +H RIHTGEKPY+C C FTQS +L H+ HTG+KP ++C C + L +H Q+ HT ++P C CGK+F TL +H++ H GEK +KC+ C S +L H +H+ KPF+C+QC ++F + L +H+ ++ EK +EC CG+ F + +L H +H E
Sbjct: 72 CNWNSYRKDSKQNSELMKTSRMFVQKKVYGCDECGKTFRQSSSLLKHQRIHTGEKPYTCNVCDKHFIERSSLTVHQR-THTGEKPYKCHECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFRKNSSLIQHERIHTGEKPYKCHDCGKAFTQSMNLTVHQRTHTGEKP-YECNQCGKAFSQSMHLIVH-QRSHTGEKPYECSECGKAFSKSSTLTLHQRNHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNQCGKAFSKNSSLTQHRRIH---------TGEKPYECMICGKHFTGRSSLTVHQVIHTGE 377 HSP 6 Score: 167.933 bits (424), Expect = 1.746e-44 Identity = 94/249 (37.75%), Postives = 137/249 (55.02%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHT 379
C+ C + L+ H ++H+ E+P++C+ C + F L H +HTG KP+ C C F+ S L H R HT EKP++C +C S + + L H R H+G +P++C C A L +H RIHTGEKPYEC IC FT +SL H++IHTG+KP ++C C + L H Q++HT ++P C CGK+F +L VH++ H GEK ++C+ C S +L H HT
Sbjct: 214 CHDCGKAFTQSMNLTVHQRTHTGEKPYECNQCGKAFSQSMHLIVHQRSHTGEKPYECSECGKAFSKSSTLTLHQR-NHTGEKPYKCNKCGKSFSQSTYLIEHQRLHSGVKPFECNQCGKAFSKNSSLTQHRRIHTGEKPYECMICGKHFTGRSSLTVHQVIHTGEKP-YECTECGKAFSQSAYLIEH-QRIHTGEKPYECDQCGKAFIKNSSLIVHQRIHTGEKPYQCNECGKSFSRSTNLTRHQRTHT 459
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957761|ref|XP_021923327.1| (transcriptional repressor CTCF-like isoform X1 [Zootermopsis nevadensis] >gi|1227957763|ref|XP_021923334.1| transcriptional repressor CTCF-like isoform X1 [Zootermopsis nevadensis] >gi|1227957765|ref|XP_021923343.1| transcriptional repressor CTCF-like isoform X1 [Zootermopsis nevadensis] >gi|1227957767|ref|XP_021923353.1| transcriptional repressor CTCF-like isoform X1 [Zootermopsis nevadensis]) HSP 1 Score: 792.727 bits (2046), Expect = 0.000e+0 Identity = 400/626 (63.90%), Postives = 471/626 (75.24%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS A + A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 94 MTVVSGVADPSSEASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 695
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957773|ref|XP_021923380.1| (transcriptional repressor CTCF-like isoform X4 [Zootermopsis nevadensis]) HSP 1 Score: 792.341 bits (2045), Expect = 0.000e+0 Identity = 400/626 (63.90%), Postives = 471/626 (75.24%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS A + A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 92 MTVVSGVADPSSEASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 693
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957775|ref|XP_021923389.1| (transcriptional repressor CTCF-like isoform X5 [Zootermopsis nevadensis]) HSP 1 Score: 790.801 bits (2041), Expect = 0.000e+0 Identity = 400/626 (63.90%), Postives = 472/626 (75.40%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS+ + E A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 94 MTVVSDPSSE---ASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 692
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957771|ref|XP_021923373.1| (transcriptional repressor CTCF-like isoform X3 [Zootermopsis nevadensis]) HSP 1 Score: 790.415 bits (2040), Expect = 0.000e+0 Identity = 400/626 (63.90%), Postives = 471/626 (75.24%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS P + A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 94 MTVVSVADPSS-EASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 694
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957777|ref|XP_021923399.1| (transcriptional repressor CTCF-like isoform X6 [Zootermopsis nevadensis]) HSP 1 Score: 789.26 bits (2037), Expect = 0.000e+0 Identity = 400/626 (63.90%), Postives = 471/626 (75.24%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS A + A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 43 MTVVSGVADPSSEASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 644
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1339063903|ref|XP_023711918.1| (transcriptional repressor CTCF isoform X5 [Cryptotermes secundus] >gi|1330932403|gb|PNF42638.1| hypothetical protein B7P43_G01275 [Cryptotermes secundus] >gi|1330932407|gb|PNF42642.1| hypothetical protein B7P43_G01275 [Cryptotermes secundus]) HSP 1 Score: 786.563 bits (2030), Expect = 0.000e+0 Identity = 404/625 (64.64%), Postives = 458/625 (73.28%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAP--------------------SGATAENRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEG--AATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGKNQDDVTNCFGF 602
MTVVS A + S A+ A P +G + +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV E++ E + ++MAV+ QDGQ YVVLEVIQL +G+ E A T A A+ E IE + K + K E K D+ NCFGF
Sbjct: 94 MTVVSGVANASSEVSDGSSEATYVAMQPQEGHVEETITSMDASDDGNTTGGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAVHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMA--------------GEEDDDEDDDTDGEMMAVE-QDGQQYVVLEVIQLQDGDGEQAVAVVTGDAAHTMEQAVALHTDLTDDEDVIETLRNSRKLSRKDALTIRKRIETEK----------DMQNCFGF 686
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1330932406|gb|PNF42641.1| (hypothetical protein B7P43_G01275 [Cryptotermes secundus] >gi|1330932409|gb|PNF42644.1| hypothetical protein B7P43_G01275 [Cryptotermes secundus]) HSP 1 Score: 786.178 bits (2029), Expect = 0.000e+0 Identity = 404/625 (64.64%), Postives = 458/625 (73.28%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAP--------------------SGATAENRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEG--AATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGKNQDDVTNCFGF 602
MTVVS A + S A+ A P +G + +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV E++ E + ++MAV+ QDGQ YVVLEVIQL +G+ E A T A A+ E IE + K + K E K D+ NCFGF
Sbjct: 93 MTVVSGVANASSEVSDGSSEATYVAMQPQEGHVEETITSMDASDDGNTTGGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAVHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMA--------------GEEDDDEDDDTDGEMMAVE-QDGQQYVVLEVIQLQDGDGEQAVAVVTGDAAHTMEQAVALHTDLTDDEDVIETLRNSRKLSRKDALTIRKRIETEK----------DMQNCFGF 685
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1330932404|gb|PNF42639.1| (hypothetical protein B7P43_G01275 [Cryptotermes secundus]) HSP 1 Score: 785.408 bits (2027), Expect = 0.000e+0 Identity = 404/625 (64.64%), Postives = 458/625 (73.28%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAP--------------------SGATAENRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEG--AATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGKNQDDVTNCFGF 602
MTVVS A + S A+ A P +G + +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV E++ E + ++MAV+ QDGQ YVVLEVIQL +G+ E A T A A+ E IE + K + K E K D+ NCFGF
Sbjct: 71 MTVVSGVANASSEVSDGSSEATYVAMQPQEGHVEETITSMDASDDGNTTGGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAVHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMA--------------GEEDDDEDDDTDGEMMAVE-QDGQQYVVLEVIQLQDGDGEQAVAVVTGDAAHTMEQAVALHTDLTDDEDVIETLRNSRKLSRKDALTIRKRIETEK----------DMQNCFGF 663
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957769|ref|XP_021923364.1| (transcriptional repressor CTCFL-like isoform X2 [Zootermopsis nevadensis]) HSP 1 Score: 783.097 bits (2021), Expect = 0.000e+0 Identity = 393/626 (62.78%), Postives = 469/626 (74.92%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS A + A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGEL+RH+RY+HTHEKPH+CT CDY+SVELSK++ HMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 94 MTVVSGVADPSSEASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELIRHIRYKHTHEKPHKCTICDYASVELSKMRNHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 695
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1339063891|ref|XP_023711869.1| (transcriptional repressor CTCFL isoform X1 [Cryptotermes secundus] >gi|1339063893|ref|XP_023711879.1| transcriptional repressor CTCFL isoform X1 [Cryptotermes secundus] >gi|1339063895|ref|XP_023711886.1| transcriptional repressor CTCFL isoform X1 [Cryptotermes secundus] >gi|1330932401|gb|PNF42636.1| hypothetical protein B7P43_G01275 [Cryptotermes secundus]) HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0 Identity = 388/554 (70.04%), Postives = 438/554 (79.06%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAP--------------------SGATAENRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAA 533
MTVVS A + S A+ A P +G + +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV E++ E + ++MAV+ QDGQ YVVLEVIQL +G+ E A
Sbjct: 94 MTVVSGVANASSEVSDGSSEATYVAMQPQEGHVEETITSMDASDDGNTTGGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAVHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMA--------------GEEDDDEDDDTDGEMMAVE-QDGQQYVVLEVIQLQDGDGEQAV 625 The following BLAST results are available for this feature:
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of transcriptional repressor ctcf vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of transcriptional repressor ctcf vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold22_size673200:489101..492241- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold22_size673200-processed-gene-5.2 ID=snap_masked-scaffold22_size673200-processed-gene-5.2|Name=transcriptional repressor ctcf|organism=Tigriopus kingsejongensis|type=gene|length=3141bp|location=Sequence derived from alignment at scaffold22_size673200:489101..492241- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'transcriptional repressor ctcf' has the following synonyms
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