transcriptional repressor ctcf, snap_masked-scaffold22_size673200-processed-gene-5.2 (gene) Tigriopus kingsejongensis
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Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000005697 (supercontig:LSalAtl2s:LSalAtl2s309:299512:318118:-1 gene:EMLSAG00000005697 transcript:EMLSAT00000005697 description:"augustus_masked-LSalAtl2s309-processed-gene-3.11") HSP 1 Score: 124.405 bits (311), Expect = 1.286e-29 Identity = 65/160 (40.62%), Postives = 87/160 (54.37%), Query Frame = 0
Query: 159 CSVCERGFKTLASLQNHVNTH-TGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLH 317
C++C + F L H+ H + K + C+FC F ELVRH R RHT + PHRCTECD + + H+R H+GERPYQC C + D +L RH R HTG+ PY+C+ C F + H IHTG+KP F C +C K +L+ H
Sbjct: 70 CNICSKRFAKREHLTKHLRIHKSDNKRYSCEFCYKAFRDRYELVRHTR-RHTGDFPHRCTECDKGFMRHERYLTHLRWHSGERPYQCSMCEKSFRDRSELNRHSRRHTGDLPYKCETCGKGFLRRGRYVTHVRIHTGEKP-FVCAVCSRGYRDKRELKKH 227 HSP 2 Score: 116.316 bits (290), Expect = 4.378e-27 Identity = 58/164 (35.37%), Postives = 89/164 (54.27%), Query Frame = 0
Query: 130 MCNYCNYTTPKRYLLSRHMKSH-SEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIH 292
+CN C+ KR L++H++ H S+ + + C C + F+ L H HTG PHRC C+ F + H+R+ H+ E+P++C+ C+ S + S+L RH R HTG+ PY+C C + H+RIHTGEKP+ C +C + LK H+ H
Sbjct: 69 ICNICSKRFAKREHLTKHLRIHKSDNKRYSCEFCYKAFRDRYELVRHTRRHTGDFPHRCTECDKGFMRHERYLTHLRW-HSGERPYQCSMCEKSFRDRSELNRHSRRHTGDLPYKCETCGKGFLRRGRYVTHVRIHTGEKPFVCAVCSRGYRDKRELKKHQAAH 231 HSP 3 Score: 103.219 bits (256), Expect = 6.023e-23 Identity = 69/199 (34.67%), Postives = 98/199 (49.25%), Query Frame = 0
Query: 159 CSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTT--SGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMR-CHTGERPYQCPHCTYASPDTFKL----KRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTH 350
C+ C+R FK +L H+ H G P + C C T RH+R H + P CT C E L +H++ H GE+ Y C +C P+TFK K H+ H + +ECDICH +F +S SL H +HTG+KP F CE+C + + R HV K H P C++C +F + L H+ +H
Sbjct: 1220 CTFCDRRFKNEKTLMGHMLNHFGVAP-KMASCPECGLTLQKKSYARHLRL-HGNIAPQVCTICKKEFREKRSLDKHIKVVHGGEQSYPCNYC----PETFKXAIEQKNHVDSHVYQ--FECDICHLKFQKSESLNNHYKVHTGEKP-FSCEICDKSFASEKVKRNHVLK-HQGSLPHKCEVCYMTFQSKAHLVKHESSH 1408 HSP 4 Score: 101.293 bits (251), Expect = 2.304e-22 Identity = 47/138 (34.06%), Postives = 74/138 (53.62%), Query Frame = 0
Query: 127 QKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIH 264
+++ C +C RY L RH + H+ + PH+C+ C++GF H+ H+G +P++C CE F EL RH R RHT + P++C C + + H+R HTGE+P+ C C+ D +LK+H H
Sbjct: 95 KRYSCEFCYKAFRDRYELVRHTRRHTGDFPHRCTECDKGFMRHERYLTHLRWHSGERPYQCSMCEKSFRDRSELNRHSR-RHTGDLPYKCETCGKGFLRRGRYVTHVRIHTGEKPFVCAVCSRGYRDKRELKKHQAAH 231 HSP 5 Score: 100.138 bits (248), Expect = 5.500e-22 Identity = 57/161 (35.40%), Postives = 82/161 (50.93%), Query Frame = 0
Query: 257 LKRHLRIHTGE-KPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPP 416
L +HLRIH + K Y C+ C+ F L H HTGD P +C C R H+ + H+ +RP C MC KSF DR L H + H G+ +KC+ C + + +H+ IHT +KPF C C + +R K+ LK+HQ +++ P P
Sbjct: 83 LTKHLRIHKSDNKRYSCEFCYKAFRDRYELVRHTRRHTGDFP-HRCTECDKGFMRHERYLTHL-RWHSGERPYQCSMCEKSFRDRSELNRHSRRHTGDLPYKCETCGKGFLRRGRYVTHVRIHTGEKPFVCAVCSRGYRDKRELKKHQAAHNHSGLSDPIP 241 HSP 6 Score: 92.0485 bits (227), Expect = 2.337e-19 Identity = 86/370 (23.24%), Postives = 138/370 (37.30%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNT-HTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHC--TYASPDTFKLKR-HLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKM------------------------------------CGKSFPDRYTLKVH---KKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRH-QNLYHNPNYVPPPPKEKTHE-------------CPECGRSFRHKGNLIRHMALH 443
C C T K+ +RH++ H P C++C++ F+ SL H+ H G + + C +C F + E HV +H C C + L H + HTGE+P+ C C ++AS K+KR H+ H G P++C++C+ F L H HT V ++ L +Q + + + +SFP++ ++ + E E C +C S+R H+ H F+C CD+SF+ K L RH +N + + PPP T E C C ++F +L H H
Sbjct: 1250 CPECGLTLQKKSY-ARHLRLHGNIAPQVCTICKKEFREKRSLDKHIKVVHGGEQSYPCNYCPETFKXAIEQKNHV---DSHVYQFECDICHLKFQKSESLNNHYKVHTGEKPFSCEICDKSFASE---KVKRNHVLKHQGSLPHKCEVCYMTFQSKAHLVKHESSHTRQTQVISAKINTFLESFSASLENDMQVIGFDNAESSSGIVTSGGMIFPENLDEAAAEAAQIFQNDILQSDGDDLLVNESFPEKVIPIINTLSSSSTEEENIIHCSMCTAKLNSKRSYLIHLKRHVGLNTFKCKYCDKSFQSKFRLNRHLKNHAKEGSNITPPPSSPTGEKSTDDAQIFETIKCALCPKTFTDNESLQIHTISH 1612 HSP 7 Score: 88.1965 bits (217), Expect = 3.456e-18 Identity = 62/194 (31.96%), Postives = 87/194 (44.85%), Query Frame = 0
Query: 216 CTECDYSSVELSKLKRHMRCHTGERP--YQCPHCTYASPDTFKLK---RHLRIHTGEKPYECDICHARFTQSNSLKAH-RLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQ 403
CT CD L HM H G P CP C T + K RHLR+H P C IC F + SL H +++H G++ + C CP T + + HV H C +C F +L H K H GEK F C++C S S++ +H+L H P +C+ C +F+ K L +H+
Sbjct: 1220 CTFCDRRFKNEKTLMGHMLNHFGVAPKMASCPECGL----TLQKKSYARHLRLHGNIAPQVCTICKKEFREKRSLDKHIKVVHGGEQS-YPCNYCPETFKXAIEQKNHVDS-HVYQ--FECDICHLKFQKSESLNNHYKVHTGEKPFSCEICDKSFASEKVKRNHVLKHQGSLPHKCEVCYMTFQSKAHLVKHE 1405 HSP 8 Score: 84.3445 bits (207), Expect = 5.036e-17 Identity = 53/173 (30.64%), Postives = 76/173 (43.93%), Query Frame = 0
Query: 272 CDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHD 444
C+IC RF + L H IH D + CE C + +L H ++ HT D P C C K F H + H GE+ ++C +C S + L H HT P++C+ C + F L+R + + H V EK C C R +R K L +H A H+
Sbjct: 70 CNICSKRFAKREHLTKHLRIHKSDNKRYSCEFCYKAFRDRYELVRHTRR-HTGDFPHRCTECDKGFMRHERYLTHLRWHSGERPYQCSMCEKSFRDRSELNRHSRRHTGDLPYKCETCGKGF-----LRRGRYVTH----VRIHTGEKPFVCAVCSRGYRDKRELKKHQAAHN 232 HSP 9 Score: 75.8702 bits (185), Expect = 2.091e-14 Identity = 40/147 (27.21%), Postives = 71/147 (48.30%), Query Frame = 0
Query: 301 CELCPTTCGRKTDLRLHVQKLHTSDRPMH-CKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
C +C ++ L H+ ++H SD + C+ C K+F DRY L H + H G+ +C C + +H+ H+ ++P+QC C++SFR + L RH + + ++C CG+ F +G + H+ +H E
Sbjct: 70 CNICSKRFAKREHLTKHL-RIHKSDNKRYSCEFCYKAFRDRYELVRHTRRHTGDFPHRCTECDKGFMRHERYLTHLRWHSGERPYQCSMCEKSFRDRSELNRHSRRHTG---------DLPYKCETCGKGFLRRGRYVTHVRIHTGE 206 HSP 10 Score: 70.4774 bits (171), Expect = 1.047e-12 Identity = 64/288 (22.22%), Postives = 107/288 (37.15%), Query Frame = 0
Query: 126 VQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELS-KLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHA-----RFTQSNSLKAHRLIHT------GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHE--------------GEK---------CFKCDLCPYSSISQRHLESHMLIH 378
V + C+ C+ K L+ H K H+ E+P C +C++ F + +NHV H G+ PH+C+ C F + LV+H HT + + + S L+ M+ + + F + ++ DI + +S K +I+T ++ + C +C K +H+++ H CK C KSF ++ L H K H GEK KC LCP + L+ H + H
Sbjct: 1327 VYQFECDICHLKFQKSESLNNHYKVHTGEKPFSCEICDKSFASEKVKRNHVLKHQGSLPHKCEVCYMTFQSKAHLVKH-ESSHTRQTQVISAKINTFLESFSASLENDMQVIGFDNAESSSGIVTSGGMIFPENLDEAAAEAAQIFQNDILQSDGDDLLVNESFPEKVIPIINTLSSSSTEEENIIHCSMCTAKLNSKRSYLIHLKR-HVGLNTFKCKYCDKSFQSKFRLNRHLKNHAKEGSNITPPPSSPTGEKSTDDAQIFETIKCALCPKTFTDNESLQIHTISH 1612 HSP 11 Score: 58.5362 bits (140), Expect = 4.699e-9 Identity = 68/285 (23.86%), Postives = 103/285 (36.14%), Query Frame = 0
Query: 150 SHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCG-----------RKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHEC 423
S EE CS+C + S H+ H G +CK+C+ F + L RH++ H K E S + TGE+ S D ++ ++ C +C FT + SL+ H + H D + + R H+ L ++ +C +C S + +L +HK H G K ++CD C L SH+L + D + R K LLK H +Y N PPK EC
Sbjct: 1504 STEEENIIHCSMCTAKLNSKRSYLIHLKRHVGLNTFKCKYCDKSFQSKFRLNRHLK---NHAK------------EGSNITPPPSSPTGEK----------STDDAQIFETIK---------CALCPKTFTDNESLQIHTISHFEDDSLIRSAAYQRKLRRRSLFRRSYRLRSLHRAKHISSLDLNNNVYNCTVCCVSLKRKTSLFIHKMKH-GGKSWRCDSCGDLFSHSSKLNSHLLENH-------DMLKKDIRSKGLLK-HSYIYKIWNNEEEPPKLSIQEC 1745 HSP 12 Score: 53.1434 bits (126), Expect = 2.266e-7 Identity = 27/80 (33.75%), Postives = 36/80 (45.00%), Query Frame = 0
Query: 299 FQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIH 378
+ C+ C K +HV + HT + P C +C K F D +K+H H KC LCP S R L H+L H
Sbjct: 796 YTCQFCSRCYTDKNRFEIHV-RFHTGETPYVCPICNKGFRDGKKMKIHVGRHTSSLTHKCHLCPRSFEGPRALNKHLLAH 874 HSP 13 Score: 51.9878 bits (123), Expect = 5.538e-7 Identity = 26/79 (32.91%), Postives = 38/79 (48.10%), Query Frame = 0
Query: 214 HRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIH 292
+ C C + ++ + H+R HTGE PY CP C D K+K H+ HT ++C +C F +L H L H
Sbjct: 796 YTCQFCSRCYTDKNRFEIHVRFHTGETPYVCPICNKGFRDGKKMKIHVGRHTSSLTHKCHLCPRSFEGPRALNKHLLAH 874
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000012122 (supercontig:LSalAtl2s:LSalAtl2s86:726762:733224:-1 gene:EMLSAG00000012122 transcript:EMLSAT00000012122 description:"maker-LSalAtl2s86-augustus-gene-8.9") HSP 1 Score: 123.25 bits (308), Expect = 1.515e-29 Identity = 81/287 (28.22%), Postives = 128/287 (44.60%), Query Frame = 0
Query: 159 CSVCERGFKTLASLQNHVNTHTGT-KPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLY--------HNPNYVPPPPKEKTHECPECGRSFRHKGNL 436
C+VC + + L H+ HT T + C C FT +L HV K H + YS + C +C L HLR+H+G KP+ CD C F+Q +++ HR HTG+KP + CELC R+++L+LH + +HT +RP C C K+F R L+ H++ H + + C+ C + + + H +HT ++P+ C+ C + F + LK+H ++ H N PPP + P H+ N
Sbjct: 339 CTVCGKRYPPNYLLTRHMFIHTDTNRNQNCPVCNKLFTNDKDLSEHV-------KIHGPEDLKYS-------------------HCCHYCGKRFTQRANLDAHLRVHSGFKPFSCDFCGKTFSQKGNMEEHRRTHTGEKP-YVCELCGFAFARRSELQLHNRCVHTGERPYQCAYCPKNFQRRDLLRKHERIHTDTRPYACEYCAKTFTQRDKMVVHTRLHTGERPYVCEVCGKGFCESGNLKKHLRVHGKEVPKIMHQNNKGKPPPIHPSAFVPTKSEHIFHRHNF 598 HSP 2 Score: 121.709 bits (304), Expect = 5.420e-29 Identity = 61/169 (36.09%), Postives = 88/169 (52.07%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKP 297
H C+YC +R L H++ HS +P C C + F +++ H THTG KP+ C+ C F EL H R HT E+P++C C + L++H R HT RPY C +C K+ H R+HTGE+PY C++C F +S +LK H +H + P
Sbjct: 397 HCCHYCGKRFTQRANLDAHLRVHSGFKPFSCDFCGKTFSQKGNMEEHRRTHTGEKPYVCELCGFAFARRSELQLHNRCVHTGERPYQCAYCPKNFQRRDLLRKHERIHTDTRPYACEYCAKTFTQRDKMVVHTRLHTGERPYVCEVCGKGFCESGNLKKHLRVHGKEVP 565 HSP 3 Score: 120.939 bits (302), Expect = 8.020e-29 Identity = 77/236 (32.63%), Postives = 117/236 (49.58%), Query Frame = 0
Query: 216 CTECDYSSVELSKLKRHMRCHTG-ERPYQCPHCTYASPDTFKLKRHLRIHTGEK---PYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKK-THEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
CT C L RHM HT R CP C + L H++IH E + C C RFTQ +L AH +H+G KP F C+ C T +K ++ H ++ HT ++P C++CG +F R L++H + H GE+ ++C CP + + L H IHTD +P+ C+ C ++F Q+ + H L+ E+ + C CG+ F GNL +H+ +H E
Sbjct: 339 CTVCGKRYPPNYLLTRHMFIHTDTNRNQNCPVCNKLFTNDKDLSEHVKIHGPEDLKYSHCCHYCGKRFTQRANLDAHLRVHSGFKP-FSCDFCGKTFSQKGNMEEH-RRTHTGEKPYVCELCGFAFARRSELQLHNRCVHTGERPYQCAYCPKNFQRRDLLRKHERIHTDTRPYACEYCAKTFTQRDKMVVHTRLHTG---------ERPYVCEVCGKGFCESGNLKKHLRVHGKE 563
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000005551 (supercontig:LSalAtl2s:LSalAtl2s297:69566:70609:-1 gene:EMLSAG00000005551 transcript:EMLSAT00000005551 description:"augustus_masked-LSalAtl2s297-processed-gene-0.6") HSP 1 Score: 115.546 bits (288), Expect = 2.201e-28 Identity = 83/278 (29.86%), Postives = 121/278 (43.53%), Query Frame = 0
Query: 152 SEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRH-------THEKPHRCTECDYSSVELSKLKRHMRCHTGER-PYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH------RLIHTGDKPVFQ-CELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHM-LIHTD-QKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYV 412
S R H CS+C + F L+ L H++TH+ T C C F+ L H +H T K + C +C+ S L+RH+R H + C C+ D K + HLR+H+ Y C C A+F Q L H RL + + C C + L HV + H + C +C KSFP LK+H + H + ++C LC S + + HL H IH D KP+ CD CD+++ +K L H H +
Sbjct: 68 SSFRRHSCSLCGKVFPFLSKLTRHLSTHSKTVRFNCTSCNKNFSRKDVLQAHASAQHGDTMDRATSRKEYPCPKCNSSLKSSKALERHLRSHDSRMGTFSCSFCSKDFLDKRKFQMHLRLHSSPN-YVCHFCEAKFLQKEFLNRHVSAVHGRLTPSSSPSLLHICSFCSKGFSQPGGLSKHVNRFHIRLKAHPCSLCEKSFPTLSQLKIHSRYHLKTRPYECSLCESSFVEKGHLSRHFRRIHGDGLKPWACDSCDKTYYEKYELNHHLKETHGSRFT 344 HSP 2 Score: 79.337 bits (194), Expect = 3.284e-16 Identity = 62/204 (30.39%), Postives = 87/204 (42.65%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSH-SEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKP-------HRCTECDYSSVELSKLKRHM-RCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH-RLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTS 324
C CN + L RH++SH S CS C + F Q H+ H+ + C FCEA F L RHV H P H C+ C + L +H+ R H + + C C + P +LK H R H +PYEC +C + F + L H R IH + C+ C T K +L H+++ H S
Sbjct: 139 CPKCNSSLKSSKALERHLRSHDSRMGTFSCSFCSKDFLDKRKFQMHLRLHSSPN-YVCHFCEAKFLQKEFLNRHVSAVHGRLTPSSSPSLLHICSFCSKGFSQPGGLSKHVNRFHIRLKAHPCSLCEKSFPTLSQLKIHSRYHLKTRPYECSLCESSFVEKGHLSRHFRRIHGDGLKPWACDSCDKTYYEKYELNHHLKETHGS 341 HSP 3 Score: 61.6178 bits (148), Expect = 1.817e-10 Identity = 61/269 (22.68%), Postives = 99/269 (36.80%), Query Frame = 0
Query: 240 RPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGD-------KPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHM-LIHTDQKPFQ-------CDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDP----ESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYE 489
R + C C P KL RHL H+ + C C+ F++ + L+AH GD + + C C ++ L H++ + C C K F D+ ++H + H + C C + + L H+ +H P C C + F Q L +H N +H + K H C C +SF L H H E + E + K R + ++G ++ + + D E YE
Sbjct: 71 RRHSCSLCGKVFPFLSKLTRHLSTHSKTVRFNCTSCNKNFSRKDVLQAHASAQHGDTMDRATSRKEYPCPKCNSSLKSSKALERHLRSHDSRMGTFSCSFCSKDFLDKRKFQMHLRLHSSPN-YVCHFCEAKFLQKEFLNRHVSAVHGRLTPSSSPSLLHICSFCSKGFSQPGGLSKHVNRFH--------IRLKAHPCSLCEKSFPTLSQLKIHSRYHLKTRPYECSLCESSFVEKGHLSRHFRRIHGDGLKPWACDSCDKTYYEKYE 330
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000006181 (supercontig:LSalAtl2s:LSalAtl2s337:33905:35603:-1 gene:EMLSAG00000006181 transcript:EMLSAT00000006181 description:"maker-LSalAtl2s337-augustus-gene-0.17") HSP 1 Score: 114.005 bits (284), Expect = 1.221e-27 Identity = 68/187 (36.36%), Postives = 91/187 (48.66%), Query Frame = 0
Query: 219 CDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHC--KMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQ 403
C S L LK H R HTG+ Y+C C+ A ++ LK H RIHT EKP+ C IC FT L AH +H G F CE+C ++DL+ H ++HT++RP C CGKSF + LK H +KC H+ +KPF+C CD++F+ K K HQ
Sbjct: 31 CQRSYTTLGNLKTHQRVHTGDYQYRCNSCSKAFLSSYSLKVHCRIHTKEKPFVCSICSYAFTTLYRLNAHNRLHNG--TTFNCEICSKLFTTRSDLKKH-SRIHTNERPFECSENGCGKSFMISHHLKNH---------YKC-------------------HSKEKPFECTHCDKNFKSKYAKKIHQ 186 HSP 2 Score: 101.679 bits (252), Expect = 1.481e-23 Identity = 56/161 (34.78%), Postives = 85/161 (52.80%), Query Frame = 0
Query: 190 CEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQ---KLHTSDRPMHCKMCGKSFPDRYTLKVHK 347
C+ +TT G L H R HT + +RC C + + LK H R HT E+P+ C C+YA ++L H R+H G + C+IC FT + LK H IHT ++P F+C CG+ + H++ K H+ ++P C C K+F +Y K+H+
Sbjct: 31 CQRSYTTLGNLKTHQRV-HTGDYQYRCNSCSKAFLSSYSLKVHCRIHTKEKPFVCSICSYAFTTLYRLNAHNRLHNG-TTFNCEICSKLFTTRSDLKKHSRIHTNERP-FECS--ENGCGKSFMISHHLKNHYKCHSKEKPFECTHCDKNFKSKYAKKIHQ 186 HSP 3 Score: 88.9669 bits (219), Expect = 2.509e-19 Identity = 51/143 (35.66%), Postives = 74/143 (51.75%), Query Frame = 0
Query: 128 KHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTE--CDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEK 268
++ CN C+ Y L H + H++E+P CS+C F TL L H H GT C+ C FTT +L +H R HT+E+P C+E C S + LK H +CH+ E+P++C HC FK K +IH ++
Sbjct: 53 QYRCNSCSKAFLSSYSLKVHCRIHTKEKPFVCSICSYAFTTLYRLNAHNRLHNGTT-FNCEICSKLFTTRSDLKKHSRI-HTNERPFECSENGCGKSFMISHHLKNHYKCHSKEKPFECTHC----DKNFKSKYAKKIHQAKR 189 HSP 4 Score: 85.1149 bits (209), Expect = 5.305e-18 Identity = 49/161 (30.43%), Postives = 79/161 (49.07%), Query Frame = 0
Query: 275 CHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQ--CDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHK 433
C +T +LK H+ +HTGD ++C C L++H ++HT ++P C +C +F Y L H + H G F C++C ++ L+ H IHT+++PF+C + C +SF LK H + KEK EC C ++F+ K
Sbjct: 31 CQRSYTTLGNLKTHQRVHTGDYQ-YRCNSCSKAFLSSYSLKVHC-RIHTKEKPFVCSICSYAFTTLYRLNAHNRLHNGTT-FNCEICSKLFTTRSDLKKHSRIHTNERPFECSENGCGKSFMISHHLKNHYKCH---------SKEKPFECTHCDKNFKSK 179 HSP 5 Score: 79.337 bits (194), Expect = 4.159e-16 Identity = 48/148 (32.43%), Postives = 68/148 (45.95%), Query Frame = 0
Query: 144 LSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPH--CTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHR 289
L H + H+ + ++C+ C + F + SL+ H HT KP C C FTT L H R + C C S LK+H R HT ERP++C C + + LK H + H+ EKP+EC C F + K H+
Sbjct: 41 LKTHQRVHTGDYQYRCNSCSKAFLSSYSLKVHCRIHTKEKPFVCSICSYAFTTLYRLNAHNRLHNG--TTFNCEICSKLFTTRSDLKKHSRIHTNERPFECSENGCGKSFMISHHLKNHYKCHSKEKPFECTHCDKNFKSKYAKKIHQ 186 HSP 6 Score: 74.3294 bits (181), Expect = 1.782e-14 Identity = 49/148 (33.11%), Postives = 72/148 (48.65%), Query Frame = 0
Query: 301 CELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPE--CGRSFRHKGNLIRHMALHDPE 446
C+ TT G +L+ H Q++HT D C C K+F Y+LKVH + H EK F C +C Y+ + L +H +H + F C+ C + F + LK+H ++ N E+ EC E CG+SF +L H H E
Sbjct: 31 CQRSYTTLG---NLKTH-QRVHTGDYQYRCNSCSKAFLSSYSLKVHCRIHTKEKPFVCSICSYAFTTLYRLNAHNRLH-NGTTFNCEICSKLFTTRSDLKKHSRIHTN---------ERPFECSENGCGKSFMISHHLKNHYKCHSKE 164
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000011783 (supercontig:LSalAtl2s:LSalAtl2s821:18952:21000:-1 gene:EMLSAG00000011783 transcript:EMLSAT00000011783 description:"maker-LSalAtl2s821-augustus-gene-0.29") HSP 1 Score: 112.079 bits (279), Expect = 3.761e-26 Identity = 73/247 (29.55%), Postives = 120/247 (48.58%), Query Frame = 0
Query: 128 KHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESH 374
++ C++C R H SH ++ KC VC++ + SL+ H+ TH + RC++C F+ L H++ H + + +C+ C+ + L H R H+GERP+ C C L H R H G +PY C+IC F + ++LKAH +HTGDKP ++C +C T ++ L H ++LH+S+ TL + + + + C+LC +SS + L SH
Sbjct: 212 RYFCDWCPARFDNRSAARVHEDSHKNDQT-KCYVCDKMYADRYSLRYHLRTHGIGRQIRCEYCNKSFSKPSRLDSHIKSHHNNIRDFKCSVCEKAFKTRLHLTNHFRQHSGERPFACEICHVRFRHKGSLLTHQRSHQGLRPYCCEICGKTFKEPSTLKAHSRVHTGDKP-YKCGMCAKTFTQRAGLNYH-KRLHSSEET--------------TLAAPELS--AGRVYTCELCHFSSNCEDSLNSH 439 HSP 2 Score: 111.309 bits (277), Expect = 7.338e-26 Identity = 74/217 (34.10%), Postives = 99/217 (45.62%), Query Frame = 0
Query: 121 RSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEE-RPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHC--TYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKP-----------VFQCELCPTTCGRKTDLRLHVQKLHT 323
R+ + ++ C YCN + K L H+KSH R KCSVCE+ FKT L NH H+G +P C+ C HVR+RH L H R H G RPY C C T+ P T LK H R+HTG+KPY+C +C FTQ L H+ +H+ ++ V+ CELC + + L H + LH
Sbjct: 260 RTHGIGRQIRCEYCNKSFSKPSRLDSHIKSHHNNIRDFKCSVCEKAFKTRLHLTNHFRQHSGERPFACEIC------------HVRFRHK-----------------GSLLTHQRSHQGLRPYCCEICGKTFKEPST--LKAHSRVHTGDKPYKCGMCAKTFTQRAGLNYHKRLHSSEETTLAAPELSAGRVYTCELCHFSSNCEDSLNSHYRSLHN 445 HSP 3 Score: 82.8037 bits (203), Expect = 9.768e-17 Identity = 65/261 (24.90%), Postives = 105/261 (40.23%), Query Frame = 0
Query: 216 CTECDYSSVELSKLKRHMRCH-------------TGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYE---CDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGR 460
C C L+RH+R H T Y C C P F + R+H + C +C + SL+ H H + + +CE C + + + L H++ H + R C +C K+F R L H + H GE+ F C++C + L +H H +P+ C+ C ++F++ LK H ++ +K ++C C ++F + L H LH E T A L GR
Sbjct: 174 CLTCLKRFSNCQNLRRHLRLHISRDSITPDIDNDTSSGRYFCDWC----PARFDNRSAARVHEDSHKNDQTKCYVCDKMYADRYSLRYHLRTHGIGRQI-RCEYCNKSFSKPSRLDSHIKSHHNNIRDFKCSVCEKAFKTRLHLTNHFRQHSGERPFACEICHVRFRHKGSLLTHQRSHQGLRPYCCEICGKTFKEPSTLKAHSRVH---------TGDKPYKCGMCAKTFTQRAGLNYHKRLHSSEETTL-AAPELSAGR 419
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000002369 (supercontig:LSalAtl2s:LSalAtl2s1452:111949:119280:1 gene:EMLSAG00000002369 transcript:EMLSAT00000002369 description:"maker-LSalAtl2s1452-snap-gene-0.57") HSP 1 Score: 113.235 bits (282), Expect = 3.848e-26 Identity = 86/291 (29.55%), Postives = 121/291 (41.58%), Query Frame = 0
Query: 155 RPHKCSVCERGFKTLASLQNHVN-THTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSK---LKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTD---------------------------------QKPFQCDQCDQSFRQKQLLKRHQNLYHN 408
R KC C +T S + H H G P C C F+T LV H+ H C + S E ++ H HTG R Y CPHC L+RH+RIH G KPY+C C F+ S + KAH H K CE+C RK L H+ ++HT D + C++C K F + Y++K H TH K F C++C S+++L H+ I + +K ++C CD SF ++ H + HN
Sbjct: 779 RKLKCEFCNIILQTSNSREEHYRRVHNGLLPFTCGECNKGFSTKSSLV-------NHKIKHGNFVCSFCSKEFNRRDSFNEHQLIHTGPR-YICPHCPKEFVQKSNLRRHIRIHLGIKPYKCKHCLKAFSDSAAQKAHESTHLSIK--ISCEVCGQKFARKQKLNYHM-RIHTGDGLLVCELCKKVFTNSYSMKRHLLTHSENKNFACNVCLQVFSSKKNLSVHLRIKENLGKECKLCGLVFHSETELNAHLLGYHKEANGCSRKGYKCRHCDSSFNSLSDIRVHLLMKHN 1058 HSP 2 Score: 93.9745 bits (232), Expect = 3.695e-20 Identity = 90/373 (24.13%), Postives = 150/373 (40.21%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMK-SHSEERPHKCSVCERGFKTLASLQNHVNT--------HTGTKPHRCKFCEACFTTSGEL--VRHVRYRHTH------------EKPHRCTECDYSSVEL----SKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPD---------------------------RYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTA 449
C+ C + L H+K H ++ + C+VC+ FK++ +L+NH + H T+ + + E TT+ E+ H+ + E R +C++ ++ L S+ + + R H G P+ C C L H +I G + C C F + +S H+LIHTG P + C CP +K++LR H+ ++H +P CK C K+F D + L H + H G+ C+LC + ++ H+L H++ K F C+ C Q F K+ L H + N EC CG F + L H+ + E+
Sbjct: 672 CDICQILFQWKSQLHDHVKEKHKDQEENGCNVCKLKFKSVKALKNHEKSCSLISQKDHNKTRNPKIRNHENMNTTTSEMNDTSHLIEKSNSIVIEDHENVDVGEAKIRKLKCEFCNIILQTSNSREEHYRRVHNGLLPFTCGECNKGFSTKSSLVNH-KIKHGN--FVCSFCSKEFNRRDSFNEHQLIHTG--PRYICPHCPKEFVQKSNLRRHI-RIHLGIKPYKCKHCLKAFSDSAAQKAHESTHLSIKISCEVCGQKFARKQKLNYHMRIHTGDGLLVCELCKKVFTNSYSMKRHLLTHSENKNFACNVCLQVFSSKKNLSVHLRIKENLG----------KECKLCGLVFHSETELNAHLLGYHKEANG 1028 HSP 3 Score: 81.2629 bits (199), Expect = 4.075e-16 Identity = 101/429 (23.54%), Postives = 157/429 (36.60%), Query Frame = 0
Query: 107 MDQAKGKVLKASTKRSQMVVQKHMCNYCN---YTTPKRYLLSRHM-KSHSEER---PHKCSVCERGFKTLASLQNHVNTHTGTKP------HRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRH-------------------MRCH--------------------------------TGE---RPYQCPHCTYASPDTFKLKRHL-RIHTGEKPYEC-------------------------DICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMAL 442
M + K+ K+S S+ K CNYC+ ++ +R+ HM K H + + KC +C+ +L+ H +P ++C C+ F +L HV+ +H ++ + C C + LK H +R H GE R +C C + + H R+H G P+ C C F + +S H+LIHTG P + C CP +K++LR H+ ++H +P CK C K+F D K H+ TH K C++C ++ L HM IHT C+ C + F +KRH L H+ N K C C + F K NL H+ +
Sbjct: 584 MKKHLLKIHKSSILMSEEYSLK--CNYCSENFWSLGERH---AHMNKKHPDSKIDGDFKCKICKHVSPNKNALRRHFQRMHPAEPLRSNVSYKCDICQILFQWKSQLHDHVKEKHKDQEENGCNVCKLKFKSVKALKNHEKSCSLISQKDHNKTRNPKIRNHENMNTTTSEMNDTSHLIEKSNSIVIEDHENVDVGEAKIRKLKCEFCNIILQTSNSREEHYRRVHNGLLPFTCGECNKGFSTKSSLVNHKIKHGNFVCSFCSKEFNRRDSFNEHQLIHTG--PRYICPHCPKEFVQKSNLRRHI-RIHLGIKPYKCKHCLKAFSDSAAQKAHESTHLSIK-ISCEVCGQKFARKQKLNYHMRIHTGDGLLVCELCKKVFTNSYSMKRHL-LTHSEN--------KNFACNVCLQVFSSKKNLSVHLRI 994 HSP 4 Score: 75.485 bits (184), Expect = 2.092e-14 Identity = 58/255 (22.75%), Postives = 100/255 (39.22%), Query Frame = 0
Query: 111 KGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPH-----RCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTG--------------------------------DKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPM 328
KG K+S ++ +C++C+ +R + H H+ R + C C + F ++L+ H+ H G KP++CK C F+ S + HE H C C KL HMR HTG+ C C +++ +KRHL H+ K + C++C F+ +L H I + ++C C ++ +D+R+H+ H D+ +
Sbjct: 817 KGFSTKSSLVNHKIKHGNFVCSFCSKEFNRRDSFNEHQLIHTGPR-YICPHCPKEFVQKSNLRRHIRIHLGIKPYKCKHCLKAFSDSAA-------QKAHESTHLSIKISCEVCGQKFARKQKLNYHMRIHTGDGLLVCELCKKVFTNSYSMKRHLLTHSENKNFACNVCLQVFSSKKNLSVHLRIKENLGKECKLCGLVFHSETELNAHLLGYHKEANGCSRKGYKCRHCDSSFNSLSDIRVHLLMKHNIDKDL 1063 HSP 5 Score: 60.077 bits (144), Expect = 1.433e-9 Identity = 84/348 (24.14%), Postives = 136/348 (39.08%), Query Frame = 0
Query: 159 CSVCERGFKTLASLQNHVN-THTGT-KPHRCKFCEACFTTSGELVRHVRYRH------THEKPHRCTECDYSSVELSKLKRHM-RCHTGER---PYQCPHCTYASPDTFKLKRHL-RIHTGE-----KPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPT-------------TCG----------RKTDLRLHVQKLHTSDRPMH--CKMCGKSFPDRYTLKVHKKTHEGE---KCFKCDLCPYSSISQRHLESHM-LIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKT----------------HECPECGRSFRHKGNLIRHMALH 443
CSVC+ FK+ LQ+HV+ H+ + K +RC FC + + +H+ H + E +C C + L + HM + H + ++C C + SP+ L+RH R+H E Y+CDIC F + L H D+ C +C +C R +R H + ++T+ M+ + KS + ++ H+ GE + KC+ C + E H +H PF C +C++ F K L H+ + H KE + CP C + F K NL RH+ +H
Sbjct: 541 CSVCDEVFKSSLKLQSHVDEIHSQSGKNYRCDFCPTMTNSLESMKKHLLKIHKSSILMSEEYSLKCNYCSENFWSLGERHAHMNKKHPDSKIDGDFKCKICKHVSPNKNALRRHFQRMHPAEPLRSNVSYKCDICQILFQWKSQLHDHVKEKHKDQEENGCNVCKLKFKSVKALKNHEKSCSLISQKDHNKTRNPKIRNH-ENMNTTTSEMNDTSHLIEKS--NSIVIEDHENVDVGEAKIRKLKCEFCNIILQTSNSREEHYRRVHNGLLPFTCGECNKGFSTKSSLVNHK-IKHGNFVCSFCSKEFNRRDSFNEHQLIHTGPRYICPHCPKEFVQKSNLRRHIRIH 884
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000004536 (supercontig:LSalAtl2s:LSalAtl2s237:446281:449693:1 gene:EMLSAG00000004536 transcript:EMLSAT00000004536 description:"maker-LSalAtl2s237-snap-gene-4.31") HSP 1 Score: 112.464 bits (280), Expect = 4.690e-26 Identity = 89/334 (26.65%), Postives = 142/334 (42.51%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYAS-PDTFKLKRHLRIHT----GEKPYECDICHARFTQSNSLKAH-RL--------IHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEG--EKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
++C+ C+ + +L +HM H E++P +CS C + F + L+ H H + C C+ F T +L H+R HT E P C C+ S S L H + GE + P + + F +R L H KP +C C F ++ L H RL H +C +C KT + H++ H + C +C +SF +++L H+ H G + +KC +CP + + LE+H+ H KP+ C++C F K +RH V + ECP C + F L H+ +H E
Sbjct: 484 YVCDKCDRAFKDKEMLIKHMYCHFEDKPFECSECGKKFSKITLLKCHYKRHFEVGNYECMICQKRFFTPSKLKEHIRV-HTGETPLTCDVCNKSFKRHSNLSDHKKNVHGENTPKVPKELFCTCGKLFTTQRDLDWHYEAEHENKPKKCKYCGEIFVHNSILTRHIRLKHEENFIPTHRKSSLYAKCPICDQL-FYKTSIPKHIRIKHHGQKLFKCDICKRSFTTKHSLVEHQWQHRGVTSRPYKCHICPKAYLRPNLLEAHVNSHKGIKPYVCNECGTKFVTKSNWQRH---------VQEHSGSRNFECPRCLKKFSRAYYLTDHLKVHTGE 806 HSP 2 Score: 111.309 bits (277), Expect = 9.858e-26 Identity = 94/297 (31.65%), Postives = 134/297 (45.12%), Query Frame = 0
Query: 110 AKGKVLKASTKRSQMVVQKHMCNYCN--YTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHV-NTHTGTKPHRCK--FCEA--CFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRC---------HTGERPY-QCPHCTYASPDTFKLKRHLRI-HTGEKPYECDICHARFTQSNSLKAHRLIHTG--DKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQC 386
+K +LK KR V + C C + TP + L H++ H+ E P C VC + FK ++L +H N H P K FC FTT +L H H + KP +C C V S L RH+R H Y +CP C T + +H+RI H G+K ++CDIC FT +SL H+ H G +P ++C +CP R L HV H +P C CG F + + H + H G + F+C C +L H+ +HT +KP+ C
Sbjct: 522 SKITLLKCHYKR-HFEVGNYECMICQKRFFTPSK--LKEHIRVHTGETPLTCDVCNKSFKRHSNLSDHKKNVHGENTPKVPKELFCTCGKLFTTQRDLDWHYEAEHEN-KPKKCKYCGEIFVHNSILTRHIRLKHEENFIPTHRKSSLYAKCPICDQLFYKT-SIPKHIRIKHHGQKLFKCDICKRSFTTKHSLVEHQWQHRGVTSRP-YKCHICPKAYLRPNLLEAHVNS-HKGIKPYVCNECGTKFVTKSNWQRHVQEHSGSRNFECPRCLKKFSRAYYLTDHLKVHTGEKPYSC 811 HSP 3 Score: 105.531 bits (262), Expect = 6.508e-24 Identity = 93/350 (26.57%), Postives = 143/350 (40.86%), Query Frame = 0
Query: 156 PHKCSVCERGFKTLASLQNHV-NTHTGTK----------------PHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRL-IHTGDKPVFQCELCPTTCGR----KTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKT--------------------------------------HEGEKCFKCDLCPYSSISQRHLESHMLIH--TDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALH 443
P KCS+C F + ++H N+H+ + C C+ F L++H+ Y H +KP C+EC +++ LK H + H Y+C C KLK H+R+HTGE P CD+C+ F + ++L H+ +H + P EL TCG+ + DL H + H ++P CK CG+ F L H + H G+K FKCD+C S ++ L H H +P++C C +++ + LL+ H N + K + C ECG F K N RH+ H
Sbjct: 438 PFKCSLCHIIFNSQRQAKDHKKNSHSLVTNAIEKNIIDPSPNHNGEYVCDKCDRAFKDKEMLIKHM-YCHFEDKPFECSECGKKFSKITLLKCHYKRHFEVGNYECMICQKRFFTPSKLKEHIRVHTGETPLTCDVCNKSFKRHSNLSDHKKNVHGENTPKVPKELF-CTCGKLFTTQRDLDWHYEAEH-ENKPKKCKYCGEIFVHNSILTRHIRLKHEENFIPTHRKSSLYAKCPICDQLFYKTSIPKHIRIKHHGQKLFKCDICKRSFTTKHSLVEHQWQHRGVTSRPYKCHICPKAYLRPNLLEAHVNSHKGI---------KPYVCNECGTKFVTKSNWQRHVQEH 775 HSP 4 Score: 87.8113 bits (216), Expect = 3.008e-18 Identity = 51/158 (32.28%), Postives = 80/158 (50.63%), Query Frame = 0
Query: 120 KRSQMVVQKHMCNYCNYTTPKRYLLSRHMK-SHSEERPHKCSVCERGFKTLASLQNHVNTHTG--TKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDI 274
++S + + +C+ Y T + +H++ H ++ KC +C+R F T SL H H G ++P++C C + L HV H KP+ C EC V S +RH++ H+G R ++CP C + L HL++HTGEKPY C I
Sbjct: 661 RKSSLYAKCPICDQLFYKTS----IPKHIRIKHHGQKLFKCDICKRSFTTKHSLVEHQWQHRGVTSRPYKCHICPKAYLRPNLLEAHVN-SHKGIKPYVCNECGTKFVTKSNWQRHVQEHSGSRNFECPRCLKKFSRAYYLTDHLKVHTGEKPYSCGI 813 HSP 5 Score: 72.7886 bits (177), Expect = 1.351e-13 Identity = 65/255 (25.49%), Postives = 96/255 (37.65%), Query Frame = 0
Query: 237 TGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLK-----AHRLI--------------HTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKE-------------------------KTHECPECGRSFRHKGNLIRHMALHDPES 447
T + ++C C +L HL + P++C +CH F K +H L+ H G+ + C+ C K L H+ H D+P C CGK F LK H K H ++C +C + L+ H+ +HT + P CD C++SF++ L H+ H N P PKE K +C CG F H L RH+ L E+
Sbjct: 407 TDGKHWKCYICFEVFTSGPQLLEHL-LMIKAAPFKCSLCHIIFNSQRQAKDHKKNSHSLVTNAIEKNIIDPSPNHNGE---YVCDKCDRAFKDKEMLIKHMY-CHFEDKPFECSECGKKFSKITLLKCHYKRHFEVGNYECMICQKRFFTPSKLKEHIRVHTGETPLTCDVCNKSFKRHSNLSDHKKNVHGEN-TPKVPKELFCTCGKLFTTQRDLDWHYEAEHENKPKKCKYCGEIFVHNSILTRHIRLKHEEN 655
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000000768 (supercontig:LSalAtl2s:LSalAtl2s1122:98013:99738:-1 gene:EMLSAG00000000768 transcript:EMLSAT00000000768 description:"augustus_masked-LSalAtl2s1122-processed-gene-1.7") HSP 1 Score: 110.153 bits (274), Expect = 1.254e-25 Identity = 68/210 (32.38%), Postives = 105/210 (50.00%), Query Frame = 0
Query: 211 EKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPH--CTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQC--ELCPTTCGRKTDLRLHVQKLHTSDR-PMHCKMCGKSFPDRYTLKVHKKTHEG--------EKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYH 407
+ P+ C ECD + KL++H H+GE P++C C FKLKRH+ IH+ +K + C++C+ F + + LK H +H+ K V+ C + C T R H Q +H+++ + CK+C K +R L H K H G EK F CD C +++ L+ H ++HT + F C C Q F +K + RH H
Sbjct: 53 KSPYPCPECDKTFPSPGKLRQHSYSHSGETPFECLEEACDKKFTSRFKLKRHVLIHSQDKQFHCEVCNRPFRRKDHLKNHEKVHSACKTVYTCSHQGCTRNYNSYTSYRKH-QAMHSAELGALDCKICHKELVNREALMNHLKVHYGSRSAKSSEEKKFPCDQCERRFFTRKDLKRHSVVHTGDREFPCHHCTQRFGRKDHMVRHAKKSH 261 HSP 2 Score: 79.7221 bits (195), Expect = 6.778e-16 Identity = 65/242 (26.86%), Postives = 100/242 (41.32%), Query Frame = 0
Query: 101 FDDDFEMDQAKGKVLK-------ASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKC--SVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTE--CDYSSVELSKLKRHMRCHTGER-PYQCPHCTYASPDTFKLKRHLRIHTG--------EKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLH 322
D ++ DQ G L +S+ + ++ + C C+ T P L +H SHS E P +C C++ F + L+ HV H+ K C+ C F L H + + + C+ C + + ++H H+ E C C + L HL++H G EK + CD C RF LK H ++HTGD+ F C C GRK + H +K H
Sbjct: 21 LDHTYQEDQRPGSSLSGGGVDSPSSSTGNSLLKSPYPCPECDKTFPSPGKLRQHSYSHSGETPFECLEEACDKKFTSRFKLKRHVLIHSQDKQFHCEVCNRPFRRKDHLKNHEKVHSACKTVYTCSHQGCTRNYNSYTSYRKHQAMHSAELGALDCKICHKELVNREALMNHLKVHYGSRSAKSSEEKKFPCDQCERRFFTRKDLKRHSVVHTGDR-EFPCHHCTQRFGRKDHMVRHAKKSH 261
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000012860 (supercontig:LSalAtl2s:LSalAtl2s97:2592838:2599454:1 gene:EMLSAG00000012860 transcript:EMLSAT00000012860 description:"maker-LSalAtl2s97-augustus-gene-26.6") HSP 1 Score: 105.145 bits (261), Expect = 1.044e-23 Identity = 58/176 (32.95%), Postives = 90/176 (51.14%), Query Frame = 0
Query: 265 TGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHM 440
+G++ + C+ C F L++H + HTG++ F+C C T GRK+ LR H+ HT C +C K+ D +L+ H + H GEK F C +C S + HL H +HT ++PF C C + F +K+ L H H+ P +CP C R F +K +L +H+
Sbjct: 164 SGKESFPCEFCDKIFINKYHLQSHLVTHTGERS-FECRKCHKTFGRKSTLRAHMTT-HTKVSNFMCPICDKACNDNNSLEEHIRMHTGEKPFVCSICSKSYARKSHLNVHYRVHTGERPFVCLNCRKDFTEKRFLNDHIQTAHSGQDGPL-------KCPNCFREFAYKTSLKQHL 330 HSP 2 Score: 102.449 bits (254), Expect = 6.706e-23 Identity = 58/170 (34.12%), Postives = 84/170 (49.41%), Query Frame = 0
Query: 180 TGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTS-DRPMHCKMCGKSFPDRYTLKVHKK 348
+G + C+FC+ F L H+ HT E+ C +C + S L+ HM HT + CP C A D L+ H+R+HTGEKP+ C IC + + + L H +HTG++P F C C K L H+Q H+ D P+ C C + F + +LK H K
Sbjct: 164 SGKESFPCEFCDKIFINKYHLQSHL-VTHTGERSFECRKCHKTFGRKSTLRAHMTTHTKVSNFMCPICDKACNDNNSLEEHIRMHTGEKPFVCSICSKSYARKSHLNVHYRVHTGERP-FVCLNCRKDFTEKRFLNDHIQTAHSGQDGPLKCPNCFREFAYKTSLKQHLK 331 HSP 3 Score: 92.0485 bits (227), Expect = 1.257e-19 Identity = 53/160 (33.12%), Postives = 77/160 (48.12%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRI-HTGEK-PYECDICHARFTQSNSLKAH 288
C +C+ +Y L H+ +H+ ER +C C + F ++L+ H+ THT C C+ + L H+R HT EKP C+ C S S L H R HTGERP+ C +C + L H++ H+G+ P +C C F SLK H
Sbjct: 171 CEFCDKIFINKYHLQSHLVTHTGERSFECRKCHKTFGRKSTLRAHMTTHTKVSNFMCPICDKACNDNNSLEEHIRM-HTGEKPFVCSICSKSYARKSHLNVHYRVHTGERPFVCLNCRKDFTEKRFLNDHIQTAHSGQDGPLKCPNCFREFAYKTSLKQH 329 HSP 4 Score: 68.9366 bits (167), Expect = 2.319e-12 Identity = 41/134 (30.60%), Postives = 62/134 (46.27%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMR-CHTGER-PYQCPHCTYASPDTFKLKRHLR 262
C C+ T ++ L HM +H++ C +C++ SL+ H+ HTG KP C C + L H R HT E+P C C E L H++ H+G+ P +CP+C LK+HL+
Sbjct: 199 CRKCHKTFGRKSTLRAHMTTHTKVSNFMCPICDKACNDNNSLEEHIRMHTGEKPFVCSICSKSYARKSHLNVHYRV-HTGERPFVCLNCRKDFTEKRFLNDHIQTAHSGQDGPLKCPNCFREFAYKTSLKQHLK 331 HSP 5 Score: 58.9214 bits (141), Expect = 3.246e-9 Identity = 35/124 (28.23%), Postives = 56/124 (45.16%), Query Frame = 0
Query: 116 KASTKRSQMV----VQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHT-HEKPHRCTECDYSSVELSKLKRHMR 234
+ ST R+ M V MC C+ L H++ H+ E+P CS+C + + + L H HTG +P C C FT L H++ H+ + P +C C + LK+H++
Sbjct: 208 RKSTLRAHMTTHTKVSNFMCPICDKACNDNNSLEEHIRMHTGEKPFVCSICSKSYARKSHLNVHYRVHTGERPFVCLNCRKDFTEKRFLNDHIQTAHSGQDGPLKCPNCFREFAYKTSLKQHLK 331
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Match: EMLSAG00000012422 (supercontig:LSalAtl2s:LSalAtl2s90:425228:432730:1 gene:EMLSAG00000012422 transcript:EMLSAT00000012422 description:"maker-LSalAtl2s90-augustus-gene-4.5") HSP 1 Score: 103.219 bits (256), Expect = 3.576e-23 Identity = 55/156 (35.26%), Postives = 84/156 (53.85%), Query Frame = 0
Query: 164 RGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQ 319
RG+K L ++ G +RC CE F L H+R H+ E+P +C+ C + +L+ L++H HTGE+P+ C C T LK H+R+H+G++PY CDIC ++FTQ LK H+ +H ++P F C C + LR H +
Sbjct: 517 RGYKALPF---PLHKKDGKIEYRCDHCEKVFGQLSNLKVHLR-THSGERPFQCSICPKTFTQLAHLQKHHLVHTGEKPHVCVECRKRFSSTSNLKTHMRLHSGQRPYICDICQSKFTQFVHLKLHKRLHNNERP-FICNTCNKAYISASGLRXHWK 667 HSP 2 Score: 93.9745 bits (232), Expect = 2.769e-20 Identity = 55/167 (32.93%), Postives = 82/167 (49.10%), Query Frame = 0
Query: 100 EFDDDFEMDQAKG-KVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHT 265
E D MD ++G K L + ++ + C++C + L H+++HS ERP +CS+C + F LA LQ H HTG KPH C C F+++ L H+R H+ ++P+ C C + LK H R H ERP+ C C A L+ H + T
Sbjct: 506 ELDIKKSMDDSRGYKALPFPLHKKDGKIE-YRCDHCEKVFGQLSNLKVHLRTHSGERPFQCSICPKTFTQLAHLQKHHLVHTGEKPHVCVECRKRFSSTSNLKTHMRL-HSGQRPYICDICQSKFTQFVHLKLHKRLHNNERPFICNTCNKAYISASGLRXHWKTTT 670 HSP 3 Score: 80.4925 bits (197), Expect = 5.591e-16 Identity = 56/205 (27.32%), Postives = 94/205 (45.85%), Query Frame = 0
Query: 291 IHTGDKPV-FQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDE 494
+H D + ++C+ C G+ ++L++H+ + H+ +RP C +C K+F L+ H H GEK C C S +L++HM +H+ Q+P+ CD C F Q LK H+ L++N E+ C C +++ L H + T +EK++ + Q+ A DE D D+ D E E
Sbjct: 526 LHKKDGKIEYRCDHCEKVFGQLSNLKVHL-RTHSGERPFQCSICPKTFTQLAHLQKHHLVHTGEKPHVCVECRKRFSSTSNLKTHMRLHSGQRPYICDICQSKFTQFVHLKLHKRLHNN---------ERPFICNTCNKAYISASGLRXHWKTTTCKPTNEEKSVPDSLLEQQP-------AARPKLSNDEFDSDKLDCPSNETE 713
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|1706178|sp|Q08705.1|CTCF_CHICK (RecName: Full=Transcriptional repressor CTCF; AltName: Full=11-zinc finger protein; AltName: Full=CCCTC-binding factor; AltName: Full=CTCFL paralog) HSP 1 Score: 360.147 bits (923), Expect = 3.400e-114 Identity = 175/363 (48.21%), Postives = 237/363 (65.29%), Query Frame = 0
Query: 81 EDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQK--HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRL-IHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTS-DRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRH 439
E+G+ VYDF+ + + ++ G + + + K C C+YT P+R L RHMKSH++ERPHKC +C R F+T+ L+NH+NTHTGT+PH+C C+ F TSGELVRH RY+HTHEKP +C+ CDY+SVE+SKLKRH+R HTGERP+QC C+YAS DT+KLKRH+R H+GEKPYEC ICHARFTQS ++K H L HT + F C C T RK+DL +H++K H+ ++ C+ C F +RY L H+K+H+ EK FKCD C Y+ +RH+ H HT +KP+ C CD++FRQKQLL H YH+PN+VP C +CG++F + + RH
Sbjct: 216 EEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMVMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPA-----AFVCSKCGKTFTRRNTMARH 573
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|30172804|sp|Q61164.2|CTCF_MOUSE (RecName: Full=Transcriptional repressor CTCF; AltName: Full=11-zinc finger protein; AltName: Full=CCCTC-binding factor; AltName: Full=CTCFL paralog) HSP 1 Score: 359.377 bits (921), Expect = 9.560e-114 Identity = 175/364 (48.08%), Postives = 237/364 (65.11%), Query Frame = 0
Query: 80 AEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQK--HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRL-IHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTS-DRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRH 439
E+G+ VYDF+ + + ++ G + + + K C C+YT P+R L RHMKSH++ERPHKC +C R F+T+ L+NH+NTHTGT+PH+C C+ F TSGELVRH RY+HTHEKP +C+ CDY+SVE+SKLKRH+R HTGERP+QC C+YAS DT+KLKRH+R H+GEKPYEC ICHARFTQS ++K H L HT + F C C T RK+DL +H++K H+ ++ C+ C F +RY L H+K+H+ EK FKCD C Y+ +RH+ H HT +KP+ C CD++FRQKQLL H YH+PN+VP C +CG++F + + RH
Sbjct: 215 TEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPA-----AFVCSKCGKTFTRRNTMARH 573
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|1706179|sp|P49711.1|CTCF_HUMAN (RecName: Full=Transcriptional repressor CTCF; AltName: Full=11-zinc finger protein; AltName: Full=CCCTC-binding factor; AltName: Full=CTCFL paralog) HSP 1 Score: 358.607 bits (919), Expect = 1.176e-113 Identity = 175/363 (48.21%), Postives = 237/363 (65.29%), Query Frame = 0
Query: 81 EDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQK--HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRL-IHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTS-DRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRH 439
E+G+ VYDF+ + + ++ G + + + K C C+YT P+R L RHMKSH++ERPHKC +C R F+T+ L+NH+NTHTGT+PH+C C+ F TSGELVRH RY+HTHEKP +C+ CDY+SVE+SKLKRH+R HTGERP+QC C+YAS DT+KLKRH+R H+GEKPYEC ICHARFTQS ++K H L HT + F C C T RK+DL +H++K H+ ++ C+ C F +RY L H+K+H+ EK FKCD C Y+ +RH+ H HT +KP+ C CD++FRQKQLL H YH+PN+VP C +CG++F + + RH
Sbjct: 216 EEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPA-----AFVCSKCGKTFTRRNTMARH 573
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|30172732|sp|Q9R1D1.1|CTCF_RAT (RecName: Full=Transcriptional repressor CTCF; AltName: Full=11-zinc finger protein; AltName: Full=CCCTC-binding factor; AltName: Full=CTCFL paralog) HSP 1 Score: 358.607 bits (919), Expect = 2.021e-113 Identity = 175/364 (48.08%), Postives = 237/364 (65.11%), Query Frame = 0
Query: 80 AEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQK--HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRL-IHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTS-DRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRH 439
E+G+ VYDF+ + + ++ G + + + K C C+YT P+R L RHMKSH++ERPHKC +C R F+T+ L+NH+NTHTGT+PH+C C+ F TSGELVRH RY+HTHEKP +C+ CDY+SVE+SKLKRH+R HTGERP+QC C+YAS DT+KLKRH+R H+GEKPYEC ICHARFTQS ++K H L HT + F C C T RK+DL +H++K H+ ++ C+ C F +RY L H+K+H+ EK FKCD C Y+ +RH+ H HT +KP+ C CD++FRQKQLL H YH+PN+VP C +CG++F + + RH
Sbjct: 215 TEEGKDVDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPA-----AFVCSKCGKTFTRRNTMARH 573
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|313104098|sp|Q8NI51.2|CTCFL_HUMAN (RecName: Full=Transcriptional repressor CTCFL; AltName: Full=Brother of the regulator of imprinted sites; AltName: Full=CCCTC-binding factor; AltName: Full=CTCF paralog; AltName: Full=CTCF-like protein; AltName: Full=Cancer/testis antigen 27; Short=CT27; AltName: Full=Zinc finger protein CTCF-T) HSP 1 Score: 344.354 bits (882), Expect = 6.874e-109 Identity = 159/311 (51.13%), Postives = 213/311 (68.49%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDK-PVFQCELCPTTCGRKTDLRLHVQKLHT-SDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRH 439
C+ C +T+ + +RHMK+H+ E+PH C +C + F+T+ L+NHVNTHTGT+P++C C F TSGELVRH RY+HTHEKP +C+ C Y+SVE SKLKRH+R HTGERP+QC C+YAS DT+KLKRH+R H+GEKPYEC ICH RFTQS ++K H L G+ P +QC C T RK+DLR+H++ LH S + C+ C F +RY L H+KTH+ EK FKC C Y+ +RH+ +H+ HT +KPF C C++ FRQKQLL H YH+ N++P ++C +CG+ F NL RH
Sbjct: 259 CDVCMFTSSRMSSFNRHMKTHTSEKPHLCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHILQKHGENVPKYQCPHCATIIARKSDLRVHMRNLHAYSAAELKCRYCSAVFHERYALIQHQKTHKNEKRFKCKHCSYACKQERHMTAHIRTHTGEKPFTCLSCNKCFRQKQLLNAHFRKYHDANFIPT-----VYKCSKCGKGFSRWINLHRH 564 HSP 2 Score: 107.071 bits (266), Expect = 5.315e-23 Identity = 63/199 (31.66%), Postives = 93/199 (46.73%), Query Frame = 0
Query: 242 YQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHM 440
+ C C + S RH++ HT EKP+ C +C F L+ H HTG +P ++C C +L H + HT ++P C MC + + LK H ++H GE+ F+C C Y+S L+ HM H+ +KP++C C F Q +K H H N VP ++CP C K +L HM
Sbjct: 257 FHCDVCMFTSSRMSSFNRHMKTHTSEKPHLCHLCLKTFRTVTLLRNHVNTHTGTRP-YKCNDCNMAFVTSGELVRHRRYKHTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCCQCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHILQKHGEN-VPK------YQCPHCATIIARKSDLRVHM 447
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|229553919|sp|A2APF3.1|CTCFL_MOUSE (RecName: Full=Transcriptional repressor CTCFL; AltName: Full=Brother of the regulator of imprinted sites; AltName: Full=CCCTC-binding factor; AltName: Full=CTCF paralog; AltName: Full=CTCF-like protein) HSP 1 Score: 337.035 bits (863), Expect = 2.401e-106 Identity = 163/322 (50.62%), Postives = 216/322 (67.08%), Query Frame = 0
Query: 127 QKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDK-PVFQCELCPTTCGRKTDLRLHVQKLHT-SDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
Q C+ C +T+ K +RH+K HS ERPH C +C + F+T+ L+NHVNTHTGT+PH+C+ C+ F TSGELVRH RY+HT+EKP +C+ C Y+SVE SK+KRH+R HTGERP+QC C YAS D++KLKRH+R H+GEKPYEC CH RFTQS ++K H G+ P ++C C T RK+DLR+H++ LH+ S M C+ C F +RY L H++TH+ EK FKC C Y+ +R L++HM +HT +KPF C C++ FRQKQLL H YH+PN+VP H C +C + F NL RH DPE
Sbjct: 255 QSFQCDTCPFTSSKLSTFNRHIKIHSNERPHLCHLCLKAFRTVTLLRNHVNTHTGTRPHKCRDCDMAFVTSGELVRHRRYKHTYEKPFKCSLCKYASVEASKMKRHIRSHTGERPFQCCQCAYASRDSYKLKRHMRTHSGEKPYECPTCHVRFTQSGTMKIHIAQKHGENVPKYECPHCATIIARKSDLRVHLRNLHSQSPEEMKCRYCPAGFHERYALIQHQRTHKNEKKFKCKQCDYACKQERCLKAHMRMHTGEKPFSCLACNKHFRQKQLLTVHLRKYHDPNFVP-----NLHLCLKCDKRFSRWSNLQRHRKKCDPE 571 HSP 2 Score: 103.219 bits (256), Expect = 8.754e-22 Identity = 64/214 (29.91%), Postives = 100/214 (46.73%), Query Frame = 0
Query: 227 SKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHM 440
+K KR + + +QC C + S RH++IH+ E+P+ C +C F L+ H HTG +P +C C +L H + HT ++P C +C + + +K H ++H GE+ F+C C Y+S L+ HM H+ +KP++C C F Q +K H H N VP +ECP C K +L H+
Sbjct: 242 AKPKRRRQTKGKPQSFQCDTCPFTSSKLSTFNRHIKIHSNERPHLCHLCLKAFRTVTLLRNHVNTHTGTRP-HKCRDCDMAFVTSGELVRHRRYKHTYEKPFKCSLCKYASVEASKMKRHIRSHTGERPFQCCQCAYASRDSYKLKRHMRTHSGEKPYECPTCHVRFTQSGTMKIHIAQKHGEN-VP------KYECPHCATIIARKSDLRVHL 447
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|20141030|sp|Q9C0F3.2|ZN436_HUMAN (RecName: Full=Zinc finger protein 436) HSP 1 Score: 228.794 bits (582), Expect = 6.830e-67 Identity = 132/373 (35.39%), Postives = 201/373 (53.89%), Query Frame = 0
Query: 80 AEDGEAGPSGVYDFDADDPGEFD-DDFEMDQAKGKVLKAST-----KRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
AE+ E P F++ D E D ++ L+ T K ++ H+C++C + L+RH K+H+ +RP+KC C +GF + L H THTG +P+ C C F S L++H HT EKPH+C EC S LS L +H R H+GE+PY+C C + + L +H R HTGEKPYEC+ C F++ + L H +HTG++P ++C+ C + +DL H ++ HT ++P HC CG++F L H++TH GEK ++C+ C S HL +H IHT +KP++C++C +SF ++ L +HQ + EK +EC +CG+ F NLI H +H E
Sbjct: 83 AENAEENPESEEGFESGDRSERQWGDLTAEEWVSYPLQPVTDLLVHKEVHTGIRYHICSHCGKAFSQISDLNRHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQTI-HTGEKPHKCNECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECNECGRGFSERSDLIKHYRVHTGERP-YKCDECGKNFSQNSDLVRH-RRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSRSSHLITHQKIHTGEKPYECNECWRSFGERSDLIKHQRTH---------TGEKPYECVQCGKGFTQSSNLITHQRVHTGE 443 HSP 2 Score: 181.415 bits (459), Expect = 2.470e-49 Identity = 99/252 (39.29%), Postives = 140/252 (55.56%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTD 380
H CN C + + L +H ++HS E+P++C C + F + L H THTG KP+ C C F+ +L++H R HT E+P++C EC + + S L RH R HTGE+PY C C L +H R HTGEKPYEC+ C F++S+ L H+ IHTG+KP ++C C + G ++DL H Q+ HT ++P C CGK F L H++ H GEK ++C C S L H +HTD
Sbjct: 222 HKCNECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECNECGRGFSERSDLIKHYRV-HTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSRSSHLITHQKIHTGEKP-YECNECWRSFGERSDLIKH-QRTHTGEKPYECVQCGKGFTQSSNLITHQRVHTGEKPYECTECEKSFSRSSALIKHKRVHTD 470 HSP 3 Score: 152.91 bits (385), Expect = 4.583e-39 Identity = 87/253 (34.39%), Postives = 134/253 (52.96%), Query Frame = 0
Query: 208 HTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGR 460
HT + H C+ C + ++S L RH + HTG+RPY+C C + L +H R HTGE+PY+C+ C F +S+ L H+ IHTG+KP +C C + R + L H Q+ H+ ++P C+ CGKSF L H++TH GEK ++C+ C + L H +HT ++P++CD+C ++F Q L RH+ + EK + C ECG +F +L++H H E + A R
Sbjct: 132 HTGIRYHICSHCGKAFSQISDLNRHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQTIHTGEKP-HKCNECGKSFCRLSHLIQH-QRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECNECGRGFSERSDLIKHYRVHTGERPYKCDECGKNFSQNSDLVRHRRAH---------TGEKPYHCNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSR 373
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|75070500|sp|Q5R5Y7.1|ZN436_PONAB (RecName: Full=Zinc finger protein 436) HSP 1 Score: 227.254 bits (578), Expect = 2.596e-66 Identity = 131/373 (35.12%), Postives = 201/373 (53.89%), Query Frame = 0
Query: 80 AEDGEAGPSGVYDFDADDPGEFD-DDFEMDQAKGKVLKAST-----KRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
AE+ E P F++ D E D ++ L+ T K ++ H+C++C + L+RH K+H+ +RP+KC C +GF + L H T+TG +P+ C C F S L++H HT EKPH+C EC S LS L +H R H+GE+PY+C C + + L +H R HTGEKPYEC+ C F++ + L H +HTG++P ++C+ C + +DL H ++ HT ++P HC CG++F L H++TH GEK ++C+ C S HL +H IHT +KP++C++C +SF ++ L +HQ + EK +EC +CG+ F NLI H +H E
Sbjct: 83 AENAEENPESEEGFESGDRSERQWGDLTAEEWVSYPLQQVTDLLVHKEVHTGIRYHICSHCGKAFSQISDLNRHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTYTGERPYDCNECGKSFGRSSHLIQHQTI-HTGEKPHKCNECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECNECGRGFSERSDLIKHYRVHTGERP-YKCDECGKNFSQNSDLVRH-RRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSRSSHLITHQKIHTGEKPYECNECWRSFGERSDLIKHQRTH---------TGEKPYECVQCGKGFTQSSNLITHQRVHTGE 443 HSP 2 Score: 181.8 bits (460), Expect = 2.017e-49 Identity = 99/252 (39.29%), Postives = 140/252 (55.56%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTD 380
H CN C + + L +H ++HS E+P++C C + F + L H THTG KP+ C C F+ +L++H R HT E+P++C EC + + S L RH R HTGE+PY C C L +H R HTGEKPYEC+ C F++S+ L H+ IHTG+KP ++C C + G ++DL H Q+ HT ++P C CGK F L H++ H GEK ++C C S L H +HTD
Sbjct: 222 HKCNECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECNECGRGFSERSDLIKHYRV-HTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSRSSHLITHQKIHTGEKP-YECNECWRSFGERSDLIKH-QRTHTGEKPYECVQCGKGFTQSSNLITHQRVHTGEKPYECTECEKSFSRSSALIKHKRVHTD 470 HSP 3 Score: 150.984 bits (380), Expect = 2.220e-38 Identity = 86/253 (33.99%), Postives = 134/253 (52.96%), Query Frame = 0
Query: 208 HTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGR 460
HT + H C+ C + ++S L RH + HTG+RPY+C C + L +H R +TGE+PY+C+ C F +S+ L H+ IHTG+KP +C C + R + L H Q+ H+ ++P C+ CGKSF L H++TH GEK ++C+ C + L H +HT ++P++CD+C ++F Q L RH+ + EK + C ECG +F +L++H H E + A R
Sbjct: 132 HTGIRYHICSHCGKAFSQISDLNRHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTYTGERPYDCNECGKSFGRSSHLIQHQTIHTGEKP-HKCNECGKSFCRLSHLIQH-QRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECNECGRGFSERSDLIKHYRVHTGERPYKCDECGKNFSQNSDLVRHRRAH---------TGEKPYHCNECGENFSRISHLVQHQRTHTGEKPYECNACGKSFSR 373
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|81913474|sp|Q8BPP0.1|ZN436_MOUSE (RecName: Full=Zinc finger protein 436; AltName: Full=Zinc finger protein 46; Short=Zfp-46; AltName: Full=Zinc finger protein MLZ-4) HSP 1 Score: 226.483 bits (576), Expect = 2.934e-66 Identity = 136/400 (34.00%), Postives = 208/400 (52.00%), Query Frame = 0
Query: 53 PSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEF-DDDFEMDQAKGKVLKAST-----KRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPE 446
P S++V + + + P E+ E P F++ D E D ++ L+ T K + ++ H+C+ C + L+RH K+H+ +RP+KC C +GF + L H THTG +P+ C C F S L++H HT EKPH+CTEC S LS L +H R H+GE+PY+C C + + L +H R HTGEKPYEC C F++ + L H +HTG++P ++C+ C + +DL H ++ HT ++P HC CG++F L H++TH GEK ++C C S HL +H IHT +KP++C++C +SF ++ L +HQ + EK +EC +CG+ F NLI H +H E
Sbjct: 47 PKQEFSDDVEFATMSEEP---------LENAEKNPGSEEAFESGDQAERPWGDLTAEEWVSYPLQQVTDLLVHKEAHAGIRYHICSQCGKAFSQISDLNRHQKTHTGDRPYKCYECGKGFSRSSHLIQHQRTHTGERPYDCNECGKSFGRSSHLIQHQTI-HTGEKPHKCTECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECHECGRGFSERSDLIKHYRVHTGERP-YKCDECGKNFSQNSDLVRH-RRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEKPYECTACGKSFSRSSHLITHQKIHTGEKPYECNECWRSFGERSDLIKHQRTH---------TGEKPYECVQCGKGFTQSSNLITHQRVHTGE 425 HSP 2 Score: 198.749 bits (504), Expect = 5.996e-56 Identity = 108/276 (39.13%), Postives = 156/276 (56.52%), Query Frame = 0
Query: 131 CNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLY 406
CN C + + L +H H+ E+PHKC+ C + F L+ L H TH+G KP+ C+ C F+ S L +H R HT EKP+ C EC E S L +H R HTGERPY+C C L RH R HTGEKPY C+ C F++ + L H+ HTG+KP ++C C + R + L H QK+HT ++P C C +SF +R L H++TH GEK ++C C +L +H +HT +KP++C +CD+SF + L +H+ ++
Sbjct: 178 CNECGKSFGRSSHLIQHQTIHTGEKPHKCTECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSFSRSSHLAQHQR-THTGEKPYECHECGRGFSERSDLIKHYRVHTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEKP-YECTACGKSFSRSSHLITH-QKIHTGEKPYECNECWRSFGERSDLIKHQRTHTGEKPYECVQCGKGFTQSSNLITHQRVHTGEKPYECTECDKSFSRSSALIKHKRVH 450 HSP 3 Score: 176.407 bits (446), Expect = 9.950e-48 Identity = 98/252 (38.89%), Postives = 138/252 (54.76%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTD 380
H C C + + L +H ++HS E+P++C C + F + L H THTG KP+ C C F+ +L++H R HT E+P++C EC + + S L RH R HTGE+PY C C L +H R HTGEKPYEC C F++S+ L H+ IHTG+KP ++C C + G ++DL H Q+ HT ++P C CGK F L H++ H GEK ++C C S L H +HTD
Sbjct: 204 HKCTECGKSFCRLSHLIQHQRTHSGEKPYECEECGKSFSRSSHLAQHQRTHTGEKPYECHECGRGFSERSDLIKHYRV-HTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQRTHTGEKPYECTACGKSFSRSSHLITHQKIHTGEKP-YECNECWRSFGERSDLIKH-QRTHTGEKPYECVQCGKGFTQSSNLITHQRVHTGEKPYECTECDKSFSRSSALIKHKRVHTD 452 HSP 4 Score: 135.191 bits (339), Expect = 5.502e-33 Identity = 80/207 (38.65%), Postives = 114/207 (55.07%), Query Frame = 0
Query: 117 ASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHT 323
A +R+ + + C+ C +R L +H + H+ ERP+KC C + F + L H HTG KP+ C C F+ LV+H R HT EKP+ CT C S S L H + HTGE+PY+C C + + L +H R HTGEKPYEC C FTQS++L H+ +HTG+KP ++C C + R + L H +++HT
Sbjct: 248 AQHQRTHTGEKPYECHECGRGFSERSDLIKHYRVHTGERPYKCDECGKNFSQNSDLVRHRRAHTGEKPYHCNECGENFSRISHLVQHQR-THTGEKPYECTACGKSFSRSSHLITHQKIHTGEKPYECNECWRSFGERSDLIKHQRTHTGEKPYECVQCGKGFTQSSNLITHQRVHTGEKP-YECTECDKSFSRSSALIKH-KRVHT 451
BLAST of transcriptional repressor ctcf vs. SwissProt
Match: gi|74762464|sp|Q86Y25.1|Z354C_HUMAN (RecName: Full=Zinc finger protein 354C; AltName: Full=Kidney, ischemia, and developmentally-regulated protein 3; Short=hKID3) HSP 1 Score: 226.098 bits (575), Expect = 3.908e-65 Identity = 123/324 (37.96%), Postives = 181/324 (55.86%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEK 452
H+CN C + + L H + H+ E+P+KC+ CE+ F +SL +H HTG KP++C CE F+ S L++H+R HT EKP+RC EC + + S L H R HTGE+ Y+C C A KL RH RIHTGEKPY+C C ++Q SL H+ HTG++ ++ C C T R L H Q++HT +P C C K+F + H+K H GEK + C+ C + + +L H IHT +KP+QC+QC ++F Q L H+ ++ EK ++C ECG+++ ++ NL RH +H E + K
Sbjct: 216 HICNECGKSFKQNLHLIEHQRIHTGEKPYKCNECEKTFSHRSSLLSHQRIHTGEKPYKCNECEKAFSNSSTLIKHLRV-HTGEKPYRCRECGKAFSQCSTLTVHQRIHTGEKLYKCGECEKAFNCRAKLHRHQRIHTGEKPYKCSECGKGYSQFTSLAEHQRFHTGEQ-LYTCLECGRTFTRIVTLIEH-QRIHTGQKPYQCNECEKAFNQYSSFNEHRKIHTGEKLYTCEECGKAFGCKSNLYRHQRIHTGEKPYQCNQCGKAFSQYSFLTEHERIH---------TGEKLYKCMECGKAYSYRSNLCRHKKVHTKEKLYKWK 527 HSP 2 Score: 182.956 bits (463), Expect = 2.837e-49 Identity = 104/287 (36.24%), Postives = 151/287 (52.61%), Query Frame = 0
Query: 164 RGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQ 450
+ FK L + G KPH C C F + L+ H R HT EKP++C EC+ + S L H R HTGE+PY+C C A ++ L +HLR+HTGEKPY C C F+Q ++L H+ IHTG+K +++C C + L H Q++HT ++P C CGK + +L H++ H GE+ + C C + L H IHT QKP+QC++C+++F Q H+ ++ EK + C ECG++F K NL RH +H E Q
Sbjct: 195 KDFKQNFDLMKCFQIYPGGKPHICNECGKSFKQNLHLIEHQRI-HTGEKPYKCNECEKTFSHRSSLLSHQRIHTGEKPYKCNECEKAFSNSSTLIKHLRVHTGEKPYRCRECGKAFSQCSTLTVHQRIHTGEK-LYKCGECEKAFNCRAKLHRH-QRIHTGEKPYKCSECGKGYSQFTSLAEHQRFHTGEQLYTCLECGRTFTRIVTLIEHQRIHTGQKPYQCNECEKAFNQYSSFNEHRKIH---------TGEKLYTCEECGKAFGCKSNLYRHQRIHTGEKPYQ 469 HSP 3 Score: 177.948 bits (450), Expect = 2.184e-47 Identity = 98/278 (35.25%), Postives = 147/278 (52.88%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLY 406
+ CN C L +H++ H+ E+P++C C + F ++L H HTG K ++C CE F +L RH R HT EKP++C+EC + + L H R HTGE+ Y C C L H RIHTG+KPY+C+ C F Q +S HR IHTG+K ++ CE C G K++L H Q++HT ++P C CGK+F L H++ H GEK +KC C + + +L H +HT +K ++ + + F L ++Q +
Sbjct: 272 YKCNECEKAFSNSSTLIKHLRVHTGEKPYRCRECGKAFSQCSTLTVHQRIHTGEKLYKCGECEKAFNCRAKLHRHQRI-HTGEKPYKCSECGKGYSQFTSLAEHQRFHTGEQLYTCLECGRTFTRIVTLIEHQRIHTGQKPYQCNECEKAFNQYSSFNEHRKIHTGEK-LYTCEECGKAFGCKSNLYRH-QRIHTGEKPYQCNQCGKAFSQYSFLTEHERIHTGEKLYKCMECGKAYSYRSNLCRHKKVHTKEKLYKWKEYGKPFICSSSLTQYQRFF 546 HSP 4 Score: 135.191 bits (339), Expect = 2.066e-32 Identity = 81/228 (35.53%), Postives = 121/228 (53.07%), Query Frame = 0
Query: 129 HMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHTGDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCF 356
+ C C R L RH + H+ E+P+KCS C +G+ SL H HTG + + C C FT L+ H R HT +KP++C EC+ + + S H + HTGE+ Y C C A L RH RIHTGEKPY+C+ C F+Q + L H IHTG+K +++C C +++L H +K+HT ++ K GK F +L +++ +G+K +
Sbjct: 328 YKCGECEKAFNCRAKLHRHQRIHTGEKPYKCSECGKGYSQFTSLAEHQRFHTGEQLYTCLECGRTFTRIVTLIEHQRI-HTGQKPYQCNECEKAFNQYSSFNEHRKIHTGEKLYTCEECGKAFGCKSNLYRHQRIHTGEKPYQCNQCGKAFSQYSFLTEHERIHTGEK-LYKCMECGKAYSYRSNLCRH-KKVHTKEKLYKWKEYGKPFICSSSLTQYQRFFKGDKAY 552
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957761|ref|XP_021923327.1| (transcriptional repressor CTCF-like isoform X1 [Zootermopsis nevadensis] >gi|1227957763|ref|XP_021923334.1| transcriptional repressor CTCF-like isoform X1 [Zootermopsis nevadensis] >gi|1227957765|ref|XP_021923343.1| transcriptional repressor CTCF-like isoform X1 [Zootermopsis nevadensis] >gi|1227957767|ref|XP_021923353.1| transcriptional repressor CTCF-like isoform X1 [Zootermopsis nevadensis]) HSP 1 Score: 792.727 bits (2046), Expect = 0.000e+0 Identity = 400/626 (63.90%), Postives = 471/626 (75.24%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS A + A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 94 MTVVSGVADPSSEASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 695
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957773|ref|XP_021923380.1| (transcriptional repressor CTCF-like isoform X4 [Zootermopsis nevadensis]) HSP 1 Score: 792.341 bits (2045), Expect = 0.000e+0 Identity = 400/626 (63.90%), Postives = 471/626 (75.24%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS A + A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 92 MTVVSGVADPSSEASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 693
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957775|ref|XP_021923389.1| (transcriptional repressor CTCF-like isoform X5 [Zootermopsis nevadensis]) HSP 1 Score: 790.801 bits (2041), Expect = 0.000e+0 Identity = 400/626 (63.90%), Postives = 472/626 (75.40%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS+ + E A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 94 MTVVSDPSSE---ASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 692
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957771|ref|XP_021923373.1| (transcriptional repressor CTCF-like isoform X3 [Zootermopsis nevadensis]) HSP 1 Score: 790.415 bits (2040), Expect = 0.000e+0 Identity = 400/626 (63.90%), Postives = 471/626 (75.24%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS P + A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 94 MTVVSVADPSS-EASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 694
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957777|ref|XP_021923399.1| (transcriptional repressor CTCF-like isoform X6 [Zootermopsis nevadensis]) HSP 1 Score: 789.26 bits (2037), Expect = 0.000e+0 Identity = 400/626 (63.90%), Postives = 471/626 (75.24%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS A + A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 43 MTVVSGVADPSSEASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 644
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1339063903|ref|XP_023711918.1| (transcriptional repressor CTCF isoform X5 [Cryptotermes secundus] >gi|1330932403|gb|PNF42638.1| hypothetical protein B7P43_G01275 [Cryptotermes secundus] >gi|1330932407|gb|PNF42642.1| hypothetical protein B7P43_G01275 [Cryptotermes secundus]) HSP 1 Score: 786.563 bits (2030), Expect = 0.000e+0 Identity = 404/625 (64.64%), Postives = 458/625 (73.28%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAP--------------------SGATAENRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEG--AATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGKNQDDVTNCFGF 602
MTVVS A + S A+ A P +G + +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV E++ E + ++MAV+ QDGQ YVVLEVIQL +G+ E A T A A+ E IE + K + K E K D+ NCFGF
Sbjct: 94 MTVVSGVANASSEVSDGSSEATYVAMQPQEGHVEETITSMDASDDGNTTGGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAVHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMA--------------GEEDDDEDDDTDGEMMAVE-QDGQQYVVLEVIQLQDGDGEQAVAVVTGDAAHTMEQAVALHTDLTDDEDVIETLRNSRKLSRKDALTIRKRIETEK----------DMQNCFGF 686
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1330932406|gb|PNF42641.1| (hypothetical protein B7P43_G01275 [Cryptotermes secundus] >gi|1330932409|gb|PNF42644.1| hypothetical protein B7P43_G01275 [Cryptotermes secundus]) HSP 1 Score: 786.178 bits (2029), Expect = 0.000e+0 Identity = 404/625 (64.64%), Postives = 458/625 (73.28%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAP--------------------SGATAENRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEG--AATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGKNQDDVTNCFGF 602
MTVVS A + S A+ A P +G + +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV E++ E + ++MAV+ QDGQ YVVLEVIQL +G+ E A T A A+ E IE + K + K E K D+ NCFGF
Sbjct: 93 MTVVSGVANASSEVSDGSSEATYVAMQPQEGHVEETITSMDASDDGNTTGGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAVHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMA--------------GEEDDDEDDDTDGEMMAVE-QDGQQYVVLEVIQLQDGDGEQAVAVVTGDAAHTMEQAVALHTDLTDDEDVIETLRNSRKLSRKDALTIRKRIETEK----------DMQNCFGF 685
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1330932404|gb|PNF42639.1| (hypothetical protein B7P43_G01275 [Cryptotermes secundus]) HSP 1 Score: 785.408 bits (2027), Expect = 0.000e+0 Identity = 404/625 (64.64%), Postives = 458/625 (73.28%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAP--------------------SGATAENRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEG--AATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGKNQDDVTNCFGF 602
MTVVS A + S A+ A P +G + +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV E++ E + ++MAV+ QDGQ YVVLEVIQL +G+ E A T A A+ E IE + K + K E K D+ NCFGF
Sbjct: 71 MTVVSGVANASSEVSDGSSEATYVAMQPQEGHVEETITSMDASDDGNTTGGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAVHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMA--------------GEEDDDEDDDTDGEMMAVE-QDGQQYVVLEVIQLQDGDGEQAVAVVTGDAAHTMEQAVALHTDLTDDEDVIETLRNSRKLSRKDALTIRKRIETEK----------DMQNCFGF 663
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1227957769|ref|XP_021923364.1| (transcriptional repressor CTCFL-like isoform X2 [Zootermopsis nevadensis]) HSP 1 Score: 783.097 bits (2021), Expect = 0.000e+0 Identity = 393/626 (62.78%), Postives = 469/626 (74.92%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAPSGATAE-------------------NRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAATTSSVAKKSSPPPAITQVPKSLEATIEAQTSQAKAPVPSGSSASKTGEIVKLEGDGGK----NQDDVTNCFGF 602
MTVVS A + A S+ + A P G+ E +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGEL+RH+RY+HTHEKPH+CT CDY+SVELSK++ HMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV GE++DD+D++ + ++MAV+ QDGQ YVVLEVIQL +G +G +V + ++ Q +L + + + + ++ ++ + + + + D+ NCFGF
Sbjct: 94 MTVVSGVADPSSEASDGTSQTTYVAMQPQGSHVEETITSMDASDDGNTSGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELIRHIRYKHTHEKPHKCTICDYASVELSKMRNHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAIHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMAGEEDDDDDDDT--------------DGEMMAVEGQDGQQYVVLEVIQLQDG--DGGEQAVAVVTGDTSHNSMAQAV-ALHSDLTDDDEEDDDDDVVIETLRRSRKLSRKDALAIRKRIETEKDMQNCFGF 695
BLAST of transcriptional repressor ctcf vs. nr
Match: gi|1339063891|ref|XP_023711869.1| (transcriptional repressor CTCFL isoform X1 [Cryptotermes secundus] >gi|1339063893|ref|XP_023711879.1| transcriptional repressor CTCFL isoform X1 [Cryptotermes secundus] >gi|1339063895|ref|XP_023711886.1| transcriptional repressor CTCFL isoform X1 [Cryptotermes secundus] >gi|1330932401|gb|PNF42636.1| hypothetical protein B7P43_G01275 [Cryptotermes secundus]) HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0 Identity = 388/554 (70.04%), Postives = 438/554 (79.06%), Query Frame = 0
Query: 1 MTVVSEDAPETVPAPKAPSRASTRATAP--------------------SGATAENRVVLNAGGDQFQTVHIVPSDTGSNEVSYVLIVQPPDGQEAKAGEAEDGEAGPSGVYDFDADDPGEFDDDFEMDQAKGKVLKASTKRSQMVVQKHMCNYCNYTTPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCEACFTTSGELVRHVRYRHTHEKPHRCTECDYSSVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHRLIHT-GDKPVFQCELCPTTCGRKTDLRLHVQKLHTSDRPMHCKMCGKSFPDRYTLKVHKKTHEGEKCFKCDLCPYSSISQRHLESHMLIHTDQKPFQCDQCDQSFRQKQLLKRHQNLYHNPNYVPPPPKEKTHECPECGRSFRHKGNLIRHMALHDPESTAQEKAIALKIGRQRKIQIVNGQAVEVFTGEDEDDEDEEDYEDEEDEPMEVVGPESDVMAVQSQDGQHYVVLEVIQLPEGESEGAA 533
MTVVS A + S A+ A P +G + +++LNAG D +QTV IVPSDT EVSYVLIVQ PD ++ K + + VYDFD + G + + K K++K K+SQ V Q HMCNYCNYT+PKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFC++ FTTSGELVRHVRYRHTHEKPH+CTECDY+SVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAH+LIH+ GDKPVFQCELCPTTCGRKTDLR+HVQKLHTSD+P+ CK CGKSFPDRYT K+H K+HEGEKCFKCDLCPY+SISQRHLESHMLIHTDQKP+QCDQCDQSFRQKQLL+RHQNLYHNPNYVPPPP+EKTHECPECGR+FRHKGNLIRHMA+HDPES+AQEKA+ALK+GRQ+KIQI++GQ VEV E++ E + ++MAV+ QDGQ YVVLEVIQL +G+ E A
Sbjct: 94 MTVVSGVANASSEVSDGSSEATYVAMQPQEGHVEETITSMDASDDGNTTGGESTGQMILNAG-DAYQTVTIVPSDTNPGEVSYVLIVQQPDDKDDKGDDQD------LTVYDFDEGEEGGIALESGDEDDKTKIIKILPKKSQTVTQAHMCNYCNYTSPKRYLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCDSAFTTSGELVRHVRYRHTHEKPHKCTECDYASVELSKLKRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSAGDKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLKCKRCGKSFPDRYTYKIHNKSHEGEKCFKCDLCPYASISQRHLESHMLIHTDQKPYQCDQCDQSFRQKQLLRRHQNLYHNPNYVPPPPREKTHECPECGRAFRHKGNLIRHMAVHDPESSAQEKALALKLGRQKKIQIIDGQQVEVMA--------------GEEDDDEDDDTDGEMMAVE-QDGQQYVVLEVIQLQDGDGEQAV 625 The following BLAST results are available for this feature:
BLAST of transcriptional repressor ctcf vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of transcriptional repressor ctcf vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of transcriptional repressor ctcf vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold22_size673200:489101..492241- Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold22_size673200-processed-gene-5.2 ID=snap_masked-scaffold22_size673200-processed-gene-5.2|Name=transcriptional repressor ctcf|organism=Tigriopus kingsejongensis|type=gene|length=3141bp|location=Sequence derived from alignment at scaffold22_size673200:489101..492241- (Tigriopus kingsejongensis)back to top Synonyms
The feature 'transcriptional repressor ctcf' has the following synonyms
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