nuclear hormone receptor ftz-f1-like, snap_masked-scaffold233_size243130-processed-gene-1.8 (gene) Tigriopus kingsejongensis

Overview


Name	nuclear hormone receptor ftz-f1-like
Unique Name	snap_masked-scaffold233_size243130-processed-gene-1.8
Type	gene
Organism	Tigriopus kingsejongensis (Tigriopus kingsejongensis)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of nuclear hormone receptor ftz-f1-like vs. L. salmonis genes
Match: EMLSAG00000004451 (supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1 gene:EMLSAG00000004451 transcript:EMLSAT00000004451 description:"snap_masked-LSalAtl2s231-processed-gene-9.18")

HSP 1 Score: 65.855 bits (159), Expect = 1.932e-11
Identity = 28/82 (34.15%), Postives = 44/82 (53.66%), Query Frame = 0

Query:   52 CSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSKRAR 133
            C VC  K   +H  YG  +C SC+ FF+R V  +K   CL    C +++  R  C  CR+ KC+ +GMK + +  + ++  R
Sbjct:  155 CPVCGDKISGFH--YGIFSCESCKGFFKRTVQNKKNYVCLRGSQCPVTISTRKKCPACRFDKCLNIGMKLEAIREDRTRGGR 234

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BLAST of nuclear hormone receptor ftz-f1-like vs. L. salmonis genes
Match: EMLSAG00000005090 (supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0")

HSP 1 Score: 64.6994 bits (156), Expect = 3.783e-11
Identity = 33/86 (38.37%), Postives = 46/86 (53.49%), Query Frame = 0

Query:   43 GSELRRSDT-CSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSE 127
            GS  R ++  C VC  ++  YH  Y A  C  C+ FFRR++T      C  N  CEI +  R  C+ CR +KC A GM+ + V+ E
Sbjct:  163 GSSSRPAEELCLVCGDRASGYH--YNALACEGCKGFFRRSITKNSNYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAECVVPE 246

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BLAST of nuclear hormone receptor ftz-f1-like vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23")

HSP 1 Score: 63.929 bits (154), Expect = 7.728e-11
Identity = 29/71 (40.85%), Postives = 38/71 (53.52%), Query Frame = 0

Query:   52 CSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPD 122
            C VC  KS   H  YG  TC  C+ FFRR+ +      C   + C +   NR  C++CR QKC+A+GM  D
Sbjct:   47 CKVCGDKSSGVH--YGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGMSRD 115

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BLAST of nuclear hormone receptor ftz-f1-like vs. L. salmonis genes
Match: EMLSAG00000009940 (supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-1 gene:EMLSAG00000009940 transcript:EMLSAT00000009940 description:"maker-LSalAtl2s649-augustus-gene-4.7")

HSP 1 Score: 62.7734 bits (151), Expect = 2.452e-10
Identity = 30/87 (34.48%), Postives = 50/87 (57.47%), Query Frame = 0

Query:   38 LEDPDGSELRRSDTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQV 124
            ++D +G ++    +C VC  KS   H  YG  TC  C++FF+R+V       C  +R+C I   +R  C++CR +KC+ +GM+ + V
Sbjct:  424 IKDENGQDI----SCVVCGDKSSGKH--YGQFTCEGCKSFFKRSVRRALTYQCRGSRSCPIDQHHRNQCQHCRLKKCIKMGMRKEAV 504

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BLAST of nuclear hormone receptor ftz-f1-like vs. L. salmonis genes
Match: EMLSAG00000009969 (supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5")

HSP 1 Score: 62.003 bits (149), Expect = 2.814e-10
Identity = 32/91 (35.16%), Postives = 47/91 (51.65%), Query Frame = 0

Query:   37 TLEDPDGSELRRSDT---CSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQV 124
            +L  P  S    S T   C VC  KS   H  YG  TC  C++FF+R V       C   ++C +   +R  C++CR++KC+ +GMK + V
Sbjct:   57 SLTAPSPSSGTNSSTEILCVVCGDKSSGKH--YGQFTCEGCKSFFKRCVRRSLTFQCRSKKSCPVDQHHRNQCQHCRFKKCLNMGMKKEAV 145

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BLAST of nuclear hormone receptor ftz-f1-like vs. L. salmonis genes
Match: EMLSAG00000008071 (supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 gene:EMLSAG00000008071 transcript:EMLSAT00000008071 description:"snap_masked-LSalAtl2s47-processed-gene-3.10")

HSP 1 Score: 61.6178 bits (148), Expect = 3.878e-10
Identity = 40/136 (29.41%), Postives = 68/136 (50.00%), Query Frame = 0

Query:   18 NPDDVRGGPNYELNVPSDPTLEDPDGSELRRSDTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSKRARFKKMFKKKDDVVEIVQEKPK 153
            +PD        E N+ S   +++ +G   RR  TC VC   +  +H  YG  +C +C+AFF+R + G        +  CEI+ + R  C+ CR+QKC+ +GM  + V  +  +  R K  +++  +    +Q  PK
Sbjct:  241 SPDHHLCSSTSETNLFSRDIIKEEEGQ--RR--TCLVCGDIASGFH--YGVSSCEACKAFFKRTIQGNIEYTXPASNECEINKRRRKACQACRFQKCLRMGMLKEGVRLDRVRGGRQK--YRRMIESSPYIQPPPK 368

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BLAST of nuclear hormone receptor ftz-f1-like vs. L. salmonis genes
Match: EMLSAG00000005620 (supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1 gene:EMLSAG00000005620 transcript:EMLSAT00000005620 description:"maker-LSalAtl2s301-augustus-gene-5.4")

HSP 1 Score: 58.151 bits (139), Expect = 7.465e-10
Identity = 38/111 (34.23%), Postives = 54/111 (48.65%), Query Frame = 0

Query:   30 LNVPSDPTLEDPDGSELRRSDTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTG---QKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSKRARFKKM 137
            L + S+   EDP      R+  C VC   +  YH  +GA TC  C++FF R         I  C  N +C I  +NR  C+ CR +KC+ VGM   +  S   +R+ + KM
Sbjct:   21 LYLDSNSKEEDP-----MRNQICRVCDEPAAGYH--FGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCKACRLRKCLRVGM--SKAGSRYGRRSNWFKM 122

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BLAST of nuclear hormone receptor ftz-f1-like vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7")

HSP 1 Score: 60.4622 bits (145), Expect = 7.873e-10
Identity = 28/69 (40.58%), Postives = 38/69 (55.07%), Query Frame = 0

Query:   52 CSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQK-IQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGM 119
            C VC   +  +H  +GA TC  C++FF R    Q  IQ C  N  C +  +NR  C+ CR +KC+ VGM
Sbjct:   57 CRVCEEPAAGFH--FGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCVVDKKNRTACKACRLRKCIMVGM 123

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BLAST of nuclear hormone receptor ftz-f1-like vs. L. salmonis genes
Match: EMLSAG00000009941 (supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-1 gene:EMLSAG00000009941 transcript:EMLSAT00000009941 description:"maker-LSalAtl2s649-snap-gene-4.11")

HSP 1 Score: 59.6918 bits (143), Expect = 1.164e-9
Identity = 31/90 (34.44%), Postives = 47/90 (52.22%), Query Frame = 0

Query:   37 TLEDPDGSELRRSD--TCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQV 124
            ++E    SEL  S    C VC  KS   H  YG  TC  C++FF+R+V       C  ++ C +   +R  C++CR +KC  +GM+ + V
Sbjct:   66 SIEHAKPSELSESSDINCVVCGDKSSGKH--YGQFTCEGCKSFFKRSVRRNLTYQCRGSKNCPVDQHHRNQCQHCRLKKCFKMGMRREAV 153

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BLAST of nuclear hormone receptor ftz-f1-like vs. L. salmonis genes
Match: EMLSAG00000006454 (supercontig:LSalAtl2s:LSalAtl2s3535:4892:6220:-1 gene:EMLSAG00000006454 transcript:EMLSAT00000006454 description:"maker-LSalAtl2s3535-snap-gene-0.8")

HSP 1 Score: 56.225 bits (134), Expect = 9.762e-9
Identity = 36/106 (33.96%), Postives = 51/106 (48.11%), Query Frame = 0

Query:   52 CSVCLSKSENYHLNYGAPTCLSCRAFFRRAV----TGQKIQPCLMNR---------TCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSKRARFKKMFKKKDDV 144
            C VC      +H +YGA  C  CRAFFRR V     G    PC+  +          C+IS+  RG C+ CR+  C+  GM P  V+++       +K  KK++ V
Sbjct:   28 CRVCRVVEYQFH-HYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISL-FRGACQACRFLACLNKGMDPSLVLTD-------EKSLKKENSV 124

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BLAST of nuclear hormone receptor ftz-f1-like vs. SwissProt
Match: gi|45644987|sp|P33244.2|FTZF1_DROME (RecName: Full=Nuclear hormone receptor FTZ-F1; AltName: Full=FTZ-F1 alpha; AltName: Full=Nuclear receptor subfamily 5 group A member 3)

HSP 1 Score: 85.8853 bits (211), Expect = 5.658e-16
Identity = 47/129 (36.43%), Postives = 72/129 (55.81%), Query Frame = 0

Query:   52 CSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSK--RARFKKMFKK-KDDVVEIVQEKPKAKRG-RPRKKPDILPRSSMTDIAP 176
            C VC  K   YH  YG  TC SC+ FF+R V  +K+  C+  R+C I    R  C YCR+QKC+ VGMK + V ++  +  R +F  M+K+ +   +++++++  A +  R    PDI P    T I+P
Sbjct:  508 CPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMKLEAVRADRMRGGRNKFGPMYKRDRARKLQVMRQRQLALQALRNSMGPDIKP----TPISP 630

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BLAST of nuclear hormone receptor ftz-f1-like vs. SwissProt
Match: gi|7676156|sp|O00482.2|NR5A2_HUMAN (RecName: Full=Nuclear receptor subfamily 5 group A member 2; AltName: Full=Alpha-1-fetoprotein transcription factor; AltName: Full=B1-binding factor; Short=hB1F; AltName: Full=CYP7A promoter-binding factor; AltName: Full=Hepatocytic transcription factor; AltName: Full=Liver receptor homolog 1; Short=LRH-1)

HSP 1 Score: 81.6481 bits (200), Expect = 5.779e-15
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 0

Query:   50 DTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSK--RARFKKMFKK 140
            + C VC  K   YH  YG  TC SC+ FF+R V   K   C+ N+ C+I    R  C YCR+QKC++VGMK + V ++  +  R +F  M+K+
Sbjct:   84 ELCPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRFQKCLSVGMKLEAVRADRMRGGRNKFGPMYKR 174

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BLAST of nuclear hormone receptor ftz-f1-like vs. SwissProt
Match: gi|44889025|sp|P49867.2|FTZF1_BOMMO (RecName: Full=Nuclear hormone receptor FTZ-F1; AltName: Full=BmFTZ-F1; AltName: Full=Nuclear receptor subfamily 5 group A member 3)

HSP 1 Score: 81.2629 bits (199), Expect = 6.689e-15
Identity = 45/130 (34.62%), Postives = 68/130 (52.31%), Query Frame = 0

Query:   14 MDFSNPDDVRGG-PNYELNVPSDPTLEDPDGSELRRSDTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSK--RARFKKMFKK 140
            + + +P    GG P   L  P+  T+ D   ++    + C VC  K   YH  YG  TC SC+ FF+R V  +K+  C+  R C I    R  C +CR+QKC+ VGMK + V ++  +  R +F  M+K+
Sbjct:   52 ITYVDPTTGTGGEPGAYL--PTAGTVCDQTDTKDVIEELCPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNKKVYTCVAERACHIDKTQRKRCPFCRFQKCLDVGMKLEAVRADRMRGGRNKFGPMYKR 177

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BLAST of nuclear hormone receptor ftz-f1-like vs. SwissProt
Match: gi|399369|sp|P31396.1|HR3_DROME (RecName: Full=Probable nuclear hormone receptor HR3; Short=dHR3; AltName: Full=Nuclear receptor subfamily 1 group F member 4)

HSP 1 Score: 80.8777 bits (198), Expect = 7.952e-15
Identity = 46/130 (35.38%), Postives = 64/130 (49.23%), Query Frame = 0

Query:   52 CSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSKRARFKKMFKKKDDVVEIVQEKPKAKRGRPRKKPDILPRSSMTDIAPVGSHD 181
            C VC  KS   H  YG  TC  C+ FFRR+ +      C  N+ C +   NR  C+YCR QKC+ +GM  D V        +F +M KK+ + VE   ++ +  R + R + D  P SS+ D     S D
Sbjct:   51 CKVCGDKSSGVH--YGVITCEGCKGFFRRSQSSVVNYQCPRNKQCVVDRVNRNRCQYCRLQKCLKLGMSRDAV--------KFGRMSKKQREKVE---DEVRFHRAQMRAQSDAAPDSSVYDTQTPSSSD 167

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BLAST of nuclear hormone receptor ftz-f1-like vs. SwissProt
Match: gi|3334187|sp|O42101.1|NR5A2_CHICK (RecName: Full=Nuclear receptor subfamily 5 group A member 2; AltName: Full=FTF/LRH-1; AltName: Full=OR2.0)

HSP 1 Score: 80.8777 bits (198), Expect = 9.404e-15
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 0

Query:   50 DTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSK--RARFKKMFKK 140
            + C VC  K   YH  YG  TC SC+ FF+R V   K   C+ N+ C+I    R  C YCR+QKC++VGMK + V ++  +  R +F  M+K+
Sbjct:   44 ELCPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRFQKCLSVGMKLEAVRADRMRGGRNKFGPMYKR 134

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BLAST of nuclear hormone receptor ftz-f1-like vs. SwissProt
Match: gi|81907060|sp|Q9QWM1.1|NR5A2_RAT (RecName: Full=Nuclear receptor subfamily 5 group A member 2; AltName: Full=FTZ-F1 beta; AltName: Full=Liver receptor homolog 1; Short=LRH-1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.348e-14
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 0

Query:   50 DTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSK--RARFKKMFKK 140
            + C VC  K   YH  YG  TC SC+ FF+R V  QK   C+ N+ C+I    R  C YCR++KC+ VGMK + V ++  +  R +F  M+K+
Sbjct:  105 ELCPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNQKRYTCIENQNCQIDKTQRKRCPYCRFKKCIDVGMKLEAVRADRMRGGRNKFGPMYKR 195

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BLAST of nuclear hormone receptor ftz-f1-like vs. SwissProt
Match: gi|7676159|sp|P45448.3|NR5A2_MOUSE (RecName: Full=Nuclear receptor subfamily 5 group A member 2; AltName: Full=Liver receptor homolog 1; Short=LRH-1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.396e-14
Identity = 38/93 (40.86%), Postives = 54/93 (58.06%), Query Frame = 0

Query:   50 DTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSK--RARFKKMFKK 140
            + C VC  K   YH  YG  TC SC+ FF+R V  QK   C+ N+ C+I    R  C YCR++KC+ VGMK + V ++  +  R +F  M+K+
Sbjct:  105 ELCPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNQKRYTCIENQNCQIDKTQRKRCPYCRFKKCIDVGMKLEAVRADRMRGGRNKFGPMYKR 195

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BLAST of nuclear hormone receptor ftz-f1-like vs. SwissProt
Match: gi|10720139|sp|Q9XTJ4.1|NHR3_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-3)

HSP 1 Score: 79.7221 bits (195), Expect = 1.867e-14
Identity = 55/163 (33.74%), Postives = 72/163 (44.17%), Query Frame = 0

Query:   42 DGSELRRSDTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSKRARFKKMFK------KKDDVVEIVQEKPKAKRGRPRKKPDILPRSSMTDIAPVGSHDCRPIHRHPTTDEKVLRS 198
            DG E   S  CSVC  ++   H  YG   C  C+ FFRR V   K   C  ++ C I    R  CR CR+QKC+ VGM+PD +  +  K  R K   +      KK  V  I+ + P   + +          SS  D AP+   D RP       DE VL +
Sbjct:   46 DGEE---STICSVCCDEASGRH--YGVVACFGCKGFFRRTVRAGKNYVCRYSKKCRIDKAGRNVCRSCRFQKCLEVGMEPDAIRPDRDKTGRQKNPRRNTEGSIKKVSVGSILGDLPCLNKFKDDSDDAATSPSSRADSAPM---DLRPSF----IDESVLTT 196

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BLAST of nuclear hormone receptor ftz-f1-like vs. SwissProt
Match: gi|146328613|sp|O18531.2|ECR_LUCCU (RecName: Full=Ecdysone receptor; AltName: Full=20-hydroxy-ecdysone receptor; Short=20E receptor; AltName: Full=EcRH; AltName: Full=Ecdysteroid receptor; AltName: Full=Nuclear receptor subfamily 1 group H member 1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.962e-14
Identity = 46/155 (29.68%), Postives = 78/155 (50.32%), Query Frame = 0

Query:   48 RSDTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSET--SKRARFKKMFKKKD-------------DVVEIVQEKPKAKRGRPRKKPDILPRSSMTDIAPVGSHDCRPIHR 187
            + + C VC  ++  YH  Y A TC  C+ FFRR+VT   +  C     CE+ +  R  C+ CR +KC+AVGM+P+ V+ E   + + R KK  K+KD             ++++++  +P +    P    DIL +    +I P+  +    I++
Sbjct:  297 QEELCLVCGDRASGYH--YNALTCEGCKGFFRRSVTKNAVYCCKFGHACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKIQTSVCATEIKKEILDLMTCEPPSHPTCPLLPEDILAKCQARNIPPLSYNQLAVIYK 449

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BLAST of nuclear hormone receptor ftz-f1-like vs. SwissProt
Match: gi|71153514|sp|P17671.2|E75BC_DROME (RecName: Full=Ecdysone-induced protein 75B, isoforms C/D; AltName: Full=E75-A; AltName: Full=Nuclear receptor subfamily 1 group D member 3, isoforms C/D)

HSP 1 Score: 80.4925 bits (197), Expect = 2.399e-14
Identity = 52/149 (34.90%), Postives = 74/149 (49.66%), Query Frame = 0

Query:   14 MDFSNPDDVRGGPNYELNVPSDPTLEDPDGSELRRSDTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQ--PCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSKRARFKKMFKKKDDVVEIVQEKPKAKRGRPR 160
            MD +    V+G P  ELN+  D T           +  C VC  K+  +H  YG  +C  C+ FFRR++  QKIQ  PC  N+ C I   NR  C+YCR +KC+AVGM  D V        RF ++ K++   +    ++    RG+ R
Sbjct:  220 MDTTVASSVKGEP--ELNIEFDGT-----------TVLCRVCGDKASGFH--YGVHSCEGCKGFFRRSIQ-QKIQYRPCTKNQQCSILRINRNRCQYCRLKKCIAVGMSRDAV--------RFGRVPKREKARILAAMQQSTQNRGQQR 344

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BLAST of nuclear hormone receptor ftz-f1-like vs. nr
Match: gi|657600362|gb|AID52842.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 109.383 bits (272), Expect = 5.488e-21
Identity = 52/115 (45.22%), Postives = 71/115 (61.74%), Query Frame = 0

Query:   31 NVPSDPTLEDPDGSELRRSDTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQ--PCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSKRARFK---KMFKK 140
            N  +D   +DP G   RRS  C++CL+ S+++HLNYGAPTCLSCRAFFRR V   ++    C  N  C+++  NR  CR CR + C+  GM    VM+E  K  RF+   KM+K+
Sbjct:   17 NESNDKFPDDPSG---RRSKICAICLTNSDSFHLNYGAPTCLSCRAFFRRIVQNGRVNKLTCKRNNDCDVTQSNRTKCRKCRLEACLKAGMNMQSVMNEIQKHDRFRNYDKMWKR 128

HSP 2 Score: 89.3521 bits (220), Expect = 1.097e-14
Identity = 111/493 (22.52%), Postives = 205/493 (41.58%), Query Frame = 0

Query:  187 RHPTTDEKVLRSQMVELLRHWRGTVTKQQLSPEVTTVLQALAQNGTSVPGTVLKEQLDMIGQLVRIFARSVHDFNLLTSYDQDLLLKRNLHMFPALALAKSLGTATVQHKIEFLLCGDDRWLKGLKSDQDLLSSHSTMFGPGFIHALQTSLPHIRSQ--VESINNYELSSHWFCVIVYGILFYTDPASSHLFNDQEQIHAFSQHSLHFVKLLGWTNESFLTFLGSLKDLGDELPNIEWAEKVQRPLSIH--YTQMEETNITGVAKVIMDRIQKVNVGSDMLTELIMVNL-DVPLSRNFAARGKMLWSKKTKMALDHFDEYRNLSLKHKAFIHQESLGPI--MGLIAYWHDNILTPIKQFKLALGRQDLDQFEVMARNEA-------RNWQPRHVAVKEIYPMDCKELVPSMDLVQEGFNRLGDFAKNIVDEHFFYLFFLFVLFQPCSKVKELESDPVSNLSRKFQFMLIRR------SKMDADEIQKGIAGIN 659
            +HPTT E     Q++ L   W   ++K +++      L    +   S    ++ + L+ IG L + +A+ + +F  L++ DQ   L+R + MF +   AK LG+     + ++L       LK    D D  + ++       ++ LQ ++   R +  +++I    +       I    LF   P +    +  EQI    +  L +  L      S    + + + L     ++ W E   R  SI   +T ME + +     +I    Q+V +G + +  +I   L +VP   NF      LWSK+    L  F+E+  LS  ++  + Q +   +  M LI + H+     I Q + ALG +D+   E M R          +    R   V + +  + +E++  M             AK I D+  F   F+++L      V  L  + ++++  +   +L R+      SK+  D++ K IA +N
Sbjct:  333 QHPTTTE---HRQVLLLSLLWSECLSKMKINQRFLDSLIQFHKRTGSYTKAMILDHLNNIGALFQDYAKQIPEFKTLSTNDQHKQLERAIPMFISFIFAKYLGSTNGSEQFQWLFL-----LKSTPIDIDPTNLYAVNLS---LNLLQDTVKTARCENLIKTIAKIPVDQSKVFTIACACLFEPHPEAE--CDSVEQIIQNQEKVLGYFSL---DRGSLWELIDATRRLSLLYASMSW-ESTPRLKSIQLPFTDMENSWMDEACLMISKSFQEVALGEEHMKHVIASELFEVPFPPNFFQEYLKLWSKRFLTILQGFEEFNTLSSANQCLLWQATAKKVFTMTLIKFEHEP--DAISQLRFALGVEDIQTLEEMIRPWGAIPEVMPKMGMKRSNRVNKFFDKEQEEIIEEMK---------SSIAKVIDDKKIFGNLFMYLLLAEAKNV--LPKESIASIGDRHLTVLYRKLDNDGDSKVSVDQLNKCIADLN 795

[Close]

BLAST of nuclear hormone receptor ftz-f1-like vs. nr
Match: gi|657600360|gb|AID52841.1| (nuclear receptor [Tigriopus japonicus])

HSP 1 Score: 94.7449 bits (234), Expect = 1.171e-16
Identity = 68/267 (25.47%), Postives = 113/267 (42.32%), Query Frame = 0

Query:   33 PSDPTLEDPDGSELRRSD----TCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSKRARFKKMFKKKDDVVEIVQEKPKAKRGRPRKKPDILPRSSMTDIAPVGSHDCRPIHRHP---TTDEKVLRSQMVELLRHWRG----TVTKQQLSPEVTTVLQALAQNGTSVPGTVLKEQLDMIGQLVRIFARSVHDFNLLTSYDQDLLLKRNLHMFPALALAKSL 288
            P  P+L+D    + RRS     +C VC  ++ N H +YG   C SCRAFFRR+V       C  +  C ++   R +C+ CR+ KC+  GMK   V+S+  K  R +K   +K     +  +   +        P   P S    ++       RP  +       + ++L       +  W G    T T  ++SP++   +  L     ++    + E    +   +  F   V  F+ L+  D+  LL +N+ M   + LA SL
Sbjct:   99 PDFPSLKDKGEKKKRRSSPKHLSCHVCGDRAPN-HCHYGGIACFSCRAFFRRSVPKYDTYTCSSSSNCVVTPATRKNCQKCRFDKCVEAGMKASWVLSDEEKLERLEKKRSRKGQST-VSMDSSGSSSPVSSYTP---PSSQYDQMSESSEGQSRPASQESFGGPQESRILSYHEERCIEQWVGDLQTTRTTVEMSPQLLDQIVRLTHTHETIDTDTIVEFFKTVYCRIVKFVGEVDGFSTLSDTDKKTLLSKNMDMLSTIQLASSL 360

[Close]

BLAST of nuclear hormone receptor ftz-f1-like vs. nr
Match: gi|1325258266|ref|XP_023325470.1| (uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258271|ref|XP_023325479.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258277|ref|XP_023325484.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258282|ref|XP_023325492.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258289|ref|XP_023325500.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258292|ref|XP_023325508.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258296|ref|XP_023325515.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258300|ref|XP_023325523.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258306|ref|XP_023325531.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258311|ref|XP_023325539.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258315|ref|XP_023325547.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258319|ref|XP_023325554.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258329|ref|XP_023325561.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258334|ref|XP_023325570.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258338|ref|XP_023325578.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258342|ref|XP_023325585.1| uncharacterized protein LOC111699122 [Eurytemora affinis])

HSP 1 Score: 92.8189 bits (229), Expect = 8.610e-16
Identity = 39/99 (39.39%), Postives = 68/99 (68.69%), Query Frame = 0

Query:   46 LRRSDTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQP--CLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSKRARFKKMFKKKD 142
            L  ++ C +C ++    H++YGA TC SCRAFFRR++  +      C  ++ CEI+++ R +C++CRYQKC++VGMK + V+SE  ++ RF+K+ ++ +
Sbjct:   35 LSPTEKCKIC-NEPAAKHIHYGAMTCFSCRAFFRRSIQNKTANSYTCRRSQNCEINLRTRKNCQFCRYQKCLSVGMKTNWVLSEEERQRRFRKVRERHE 132

[Close]

BLAST of nuclear hormone receptor ftz-f1-like vs. nr
Match: gi|149241920|pdb|2HAN|B (Chain B, Structural Basis Of Heterodimeric Ecdysteroid Receptor Interaction With Natural Response Element Hsp27 Gene Promoter)

HSP 1 Score: 83.9593 bits (206), Expect = 1.164e-15
Identity = 45/120 (37.50%), Postives = 66/120 (55.00%), Query Frame = 0

Query:   43 GSELR-RSDTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSET--SKRARFKKMFKKKDDVVEIVQEKPKAKRGRP 159
            GS  R + + C VC  ++  YH  Y A TC  C+ FFRR+VT   +  C   R CE+ +  R  C+ CR +KC+AVGM+P+ V+ E   + + R KK  K+KD +       P ++ G P
Sbjct:    1 GSAPRVQEELCLVCGDRASGYH--YNALTCEGCKGFFRRSVTKSAVYCCKFGRACEMDMYMRRKCQECRLKKCLAVGMRPECVVPENQCAMKRREKKAQKEKDKMT----TSPSSQHGSP 114

[Close]

BLAST of nuclear hormone receptor ftz-f1-like vs. nr
Match: gi|83753936|pdb|2A66|A (Chain A, Human Liver Receptor Homologue Dna-binding Domain (hlrh-1 Dbd) In Complex With Dsdna From The Hcyp7a1 Promoter)

HSP 1 Score: 82.8037 bits (203), Expect = 2.339e-15
Identity = 42/103 (40.78%), Postives = 57/103 (55.34%), Query Frame = 0

Query:   40 DPDGSELRRSDTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSK--RARFKKMFKK 140
            D D  EL     C VC  K   YH  YG  TC SC+ FF+R V   K   C+ N+ C+I    R  C YCR+QKC++VGMK + V ++  +  R +F  M+K+
Sbjct:    5 DEDLEEL-----CPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRFQKCLSVGMKLEAVRADRMRGGRNKFGPMYKR 100

[Close]

BLAST of nuclear hormone receptor ftz-f1-like vs. nr
Match: gi|1101273707|pdb|5L0M|A (Chain A, Hlrh-1 Dna Binding Domain - 12bp Oct4 Promoter Complex)

HSP 1 Score: 82.4185 bits (202), Expect = 2.929e-15
Identity = 42/103 (40.78%), Postives = 57/103 (55.34%), Query Frame = 0

Query:   40 DPDGSELRRSDTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSK--RARFKKMFKK 140
            D D  EL     C VC  K   YH  YG  TC SC+ FF+R V   K   C+ N+ C+I    R  C YCR+QKC++VGMK + V ++  +  R +F  M+K+
Sbjct:    4 DEDLEEL-----CPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNNKRYTCIENQNCQIDKTQRKRCPYCRFQKCLSVGMKLEAVRADRMRGGRNKFGPMYKR 99

[Close]

BLAST of nuclear hormone receptor ftz-f1-like vs. nr
Match: gi|826443827|ref|XP_012530857.1| (PREDICTED: nuclear hormone receptor FTZ-F1-like, partial [Monomorium pharaonis])

HSP 1 Score: 82.8037 bits (203), Expect = 3.158e-15
Identity = 35/80 (43.75%), Postives = 46/80 (57.50%), Query Frame = 0

Query:   41 PDGSELRRSDTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMK 120
            PD  ++   + C VC  K   YH  YG  TC SC+ FF+R V  +K+  C+  R+C I    R  C YCR+QKC+ VGMK
Sbjct:   30 PDTKDIVIEELCPVCGDKVSGYH--YGLLTCESCKGFFKRTVQNKKVYTCVAERSCHIDKTQRKRCPYCRFQKCLEVGMK 107

[Close]

BLAST of nuclear hormone receptor ftz-f1-like vs. nr
Match: gi|675867812|ref|XP_009019466.1| (hypothetical protein HELRODRAFT_65322, partial [Helobdella robusta] >gi|555698825|gb|ESO02058.1| hypothetical protein HELRODRAFT_65322, partial [Helobdella robusta])

HSP 1 Score: 82.0333 bits (201), Expect = 3.306e-15
Identity = 37/93 (39.78%), Postives = 53/93 (56.99%), Query Frame = 0

Query:   50 DTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSK--RARFKKMFKK 140
            D C +C  K   YH  YG  TC SC+ FF+R+V   K   C+ N+TC I    R  C YCR+QKC+ VGMK + V  +  +  R +F  ++++
Sbjct:    3 DKCPICSDKVSGYH--YGLQTCESCKGFFKRSVQNNKKYSCIENQTCPIDKTQRKRCAYCRFQKCLLVGMKLEAVRPDRMRGGRNKFGPVYRR 93

[Close]

BLAST of nuclear hormone receptor ftz-f1-like vs. nr
Match: gi|1273514092|gb|PIC18116.1| (hypothetical protein B9Z55_024126 [Caenorhabditis nigoni])

HSP 1 Score: 89.7373 bits (221), Expect = 3.484e-15
Identity = 79/254 (31.10%), Postives = 113/254 (44.49%), Query Frame = 0

Query:   41 PDGSELRRSDTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSETSKRARFKKMFKKKDDVVEIVQEKPKAKRGRPRKKPDILPRSSMTDIAPVGSHDCRPIHRHPTTDEKVLRSQMVELLRHWRGTVTKQQLSPEVTTVLQALAQNG--TSVPGTVLKEQLDMIGQLVRI--FARSVHDFNLLTSYDQDLLLKRNLHMFPALALA-KSLG 289
            PD  + + S  C +C   +   H  YGA  C  C+ FFRR V       C     C+I   NR  CRYCR+ KC+A GM+ DQV SE   R    K  +KKD+V       P      PR  P++L                 P   +    E +L+S+M   ++  R TV  Q  + E TT  +    N   T+    VLK    M  QL+ +  +A+++ +F  L+  DQ +LLK        L +A +S+G
Sbjct:   11 PDLLDGKDSSICHICSDVATGRH--YGAIACNGCKGFFRRTVRRNYEYHCRFESKCDIDKHNRAVCRYCRFMKCIASGMRDDQVQSE---RDVIGKR-EKKDNVKTYTNHDPT-----PRTSPELL----------------SPNEDYEQLLESLLKSEMT--IQSLRETVITQTGNVEYTTKSKNRLANADSTATLNDVLKS---MHSQLLLVIEWAKTIPEFTQLSGADQAVLLKNFAGQHVTLCVAYRSVG 232

[Close]

BLAST of nuclear hormone receptor ftz-f1-like vs. nr
Match: gi|1273514091|gb|PIC18115.1| (hypothetical protein B9Z55_024126 [Caenorhabditis nigoni])

HSP 1 Score: 89.3521 bits (220), Expect = 3.985e-15
Identity = 79/257 (30.74%), Postives = 113/257 (43.97%), Query Frame = 0

Query:   41 PDGSELRRSDTCSVCLSKSENYHLNYGAPTCLSCRAFFRRAVTGQKIQPCLMNRTCEISVQNRGDCRYCRYQKCMAVGMKPDQVMSE---TSKRARFKKMFKKKDDVVEIVQEKPKAKRGRPRKKPDILPRSSMTDIAPVGSHDCRPIHRHPTTDEKVLRSQMVELLRHWRGTVTKQQLSPEVTTVLQALAQNG--TSVPGTVLKEQLDMIGQLVRI--FARSVHDFNLLTSYDQDLLLKRNLHMFPALALA-KSLG 289
            PD  + + S  C +C   +   H  YGA  C  C+ FFRR V       C     C+I   NR  CRYCR+ KC+A GM+ DQV SE     KR       +KKD+V       P      PR  P++L                 P   +    E +L+S+M   ++  R TV  Q  + E TT  +    N   T+    VLK    M  QL+ +  +A+++ +F  L+  DQ +LLK        L +A +S+G
Sbjct:   11 PDLLDGKDSSICHICSDVATGRH--YGAIACNGCKGFFRRTVRRNYEYHCRFESKCDIDKHNRAVCRYCRFMKCIASGMRDDQVQSERDVIGKR-------EKKDNVKTYTNHDPT-----PRTSPELL----------------SPNEDYEQLLESLLKSEMT--IQSLRETVITQTGNVEYTTKSKNRLANADSTATLNDVLKS---MHSQLLLVIEWAKTIPEFTQLSGADQAVLLKNFAGQHVTLCVAYRSVG 232

The following BLAST results are available for this feature:

BLAST of nuclear hormone receptor ftz-f1-like vs. L. salmonis genes
BLAST of nuclear hormone receptor ftz-f1-like vs. SwissProt
BLAST of nuclear hormone receptor ftz-f1-like vs. nr

BLAST of nuclear hormone receptor ftz-f1-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides)
Total hits: 24


Match Name	E-value	Identity	Description
EMLSAG00000004451	1.932e-11	34.15	supercontig:LSalAtl2s:LSalAtl2s231:945915:949068:1...	[more]
EMLSAG00000005090	3.783e-11	38.37	supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-...	[more]
EMLSAG00000000733	7.728e-11	40.85	supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 ...	[more]
EMLSAG00000009940	2.452e-10	34.48	supercontig:LSalAtl2s:LSalAtl2s649:353131:422335:-...	[more]
EMLSAG00000009969	2.814e-10	35.16	supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-...	[more]
EMLSAG00000008071	3.878e-10	29.41	supercontig:LSalAtl2s:LSalAtl2s47:304551:317770:1 ...	[more]
EMLSAG00000005620	7.465e-10	34.23	supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1...	[more]
EMLSAG00000005619	7.873e-10	40.58	supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1...	[more]
EMLSAG00000009941	1.164e-9	34.44	supercontig:LSalAtl2s:LSalAtl2s649:484085:485655:-...	[more]
EMLSAG00000006454	9.762e-9	33.96	supercontig:LSalAtl2s:LSalAtl2s3535:4892:6220:-1 g...	[more]

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BLAST of nuclear hormone receptor ftz-f1-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|45644987\|sp\|P33244.2\|FTZF1_DROME	5.658e-16	36.43	RecName: Full=Nuclear hormone receptor FTZ-F1; Alt...	[more]
gi\|7676156\|sp\|O00482.2\|NR5A2_HUMAN	5.779e-15	40.86	RecName: Full=Nuclear receptor subfamily 5 group A...	[more]
gi\|44889025\|sp\|P49867.2\|FTZF1_BOMMO	6.689e-15	34.62	RecName: Full=Nuclear hormone receptor FTZ-F1; Alt...	[more]
gi\|399369\|sp\|P31396.1\|HR3_DROME	7.952e-15	35.38	RecName: Full=Probable nuclear hormone receptor HR...	[more]
gi\|3334187\|sp\|O42101.1\|NR5A2_CHICK	9.404e-15	40.86	RecName: Full=Nuclear receptor subfamily 5 group A...	[more]
gi\|81907060\|sp\|Q9QWM1.1\|NR5A2_RAT	1.348e-14	40.86	RecName: Full=Nuclear receptor subfamily 5 group A...	[more]
gi\|7676159\|sp\|P45448.3\|NR5A2_MOUSE	1.396e-14	40.86	RecName: Full=Nuclear receptor subfamily 5 group A...	[more]
gi\|10720139\|sp\|Q9XTJ4.1\|NHR3_CAEEL	1.867e-14	33.74	RecName: Full=Nuclear hormone receptor family memb...	[more]
gi\|146328613\|sp\|O18531.2\|ECR_LUCCU	1.962e-14	29.68	RecName: Full=Ecdysone receptor; AltName: Full=20-...	[more]
gi\|71153514\|sp\|P17671.2\|E75BC_DROME	2.399e-14	34.90	RecName: Full=Ecdysone-induced protein 75B, isofor...	[more]

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BLAST of nuclear hormone receptor ftz-f1-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|657600362\|gb\|AID52842.1\|	5.488e-21	45.22	nuclear receptor [Tigriopus japonicus]	[more]
gi\|657600360\|gb\|AID52841.1\|	1.171e-16	25.47	nuclear receptor [Tigriopus japonicus]	[more]
gi\|1325258266\|ref\|XP_023325470.1\|	8.610e-16	39.39	uncharacterized protein LOC111699122 [Eurytemora a...	[more]
gi\|149241920\|pdb\|2HAN\|B	1.164e-15	37.50	Chain B, Structural Basis Of Heterodimeric Ecdyste...	[more]
gi\|83753936\|pdb\|2A66\|A	2.339e-15	40.78	Chain A, Human Liver Receptor Homologue Dna-bindin...	[more]
gi\|1101273707\|pdb\|5L0M\|A	2.929e-15	40.78	Chain A, Hlrh-1 Dna Binding Domain - 12bp Oct4 Pro...	[more]
gi\|826443827\|ref\|XP_012530857.1\|	3.158e-15	43.75	PREDICTED: nuclear hormone receptor FTZ-F1-like, p...	[more]
gi\|675867812\|ref\|XP_009019466.1\|	3.306e-15	39.78	hypothetical protein HELRODRAFT_65322, partial [He...	[more]
gi\|1273514092\|gb\|PIC18116.1\|	3.484e-15	31.10	hypothetical protein B9Z55_024126 [Caenorhabditis ...	[more]
gi\|1273514091\|gb\|PIC18115.1\|	3.985e-15	30.74	hypothetical protein B9Z55_024126 [Caenorhabditis ...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold233_size243130	supercontig	scaffold233_size243130:189453..191480 +

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
maker	2018-02-12 .496401
T. kinsejongensis vs L. Salmonis peptides	2018-04-19
T. kingejongensis peptided Blastp vs. SwissProt	2018-04-19
T. kingsejongensis proteins Blastp vs. NR	2018-05-15

Properties


Property Name	Value
Note	-

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
snap_masked-scaffold233_size243130-processed-gene-1.8-mRNA-1	snap_masked-scaffold233_size243130-processed-gene-1.8-mRNA-1	Tigriopus kingsejongensis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at scaffold233_size243130:189453..191480+

gene from alignment at scaffold233_size243130:189453..191480+

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>snap_masked-scaffold233_size243130-processed-gene-1.8 ID=snap_masked-scaffold233_size243130-processed-gene-1.8|Name=nuclear hormone receptor ftz-f1-like|organism=Tigriopus kingsejongensis|type=gene|length=2028bp|location=Sequence derived from alignment at scaffold233_size243130:189453..191480+ (Tigriopus kingsejongensis)
ATGAGTCTACTGAACCACATGGAAGAGGCCTTGGAGGGGATGGACTTCTC
GAACCCCGACGACGTGAGAGGAGGGCCCAACTATGAGCTGAATGTTCCCT
CCGACCCCACCCTGGAGGATCCAGATGGGAGCGAACTGAGACGGAGTGAC
ACATGCTCGGTGTGCTTGTCCAAGTCCGAGAACTACCACCTGAACTACGG
GGCCCCCACCTGTCTGAGCTGTCGGGCCTTCTTCCGCCGGGCTGTGACTG
GCCAAAAGATCCAACCTTGTCTCATGAACAGAACCTGCGAGATCAGTGTG
CAGAACCGAGGAGATTGCCGCTACTGTCGTTACCAGAAATGCATGGCGGT
GGGGATGAAACCCGATCAGGTCATGAGCGAGACGTCCAAGCGGGCCAGGT
TCAAGAAGATGTTCAAGAAAAAGGACGATGTGGTGGAGATCGTCCAAGAG
AAGCCCAAGGCCAAGCGGGGAAGGCCCCGCAAGAAGCCGGATATTTTACC
GAGGAGCTCGATGACGGATATCGCCCCCGTGGGTTCTCATGACTGTCGGC
CCATCCACCGGCATCCCACCACAGATGAGAAGGTACTCCGCTCCCAGATG
GTGGAGTTGCTCCGGCATTGGCGGGGCACTGTCACAAAGCAACAACTTTC
GCCCGAAGTCACAACTGTCCTTCAGGCCTTGGCCCAGAATGGCACGAGCG
TGCCGGGCACCGTACTGAAGGAGCAGCTGGACATGATAGGCCAGTTGGTC
CGGATCTTCGCCCGGAGTGTTCACGACTTCAATCTGCTCACCTCCTACGA
TCAGGACTTGCTCCTCAAGAGAAACTTGCACATGTTCCCGGCGCTGGCTC
TGGCCAAGTCCTTGGGCACGGCCACAGTACAACACAAGATTGAGTTCCTT
CTCTGCGGCGACGATCGGTGGCTCAAGGGACTCAAATCCGATCAGGATCT
CCTCAGCAGTCATTCCACCATGTTCGGGCCCGGCTTTATCCATGCCCTTC
AGACTTCGCTACCTCATATCAGATCTCAGGTTGAAAGCATCAACAACTAC
GAGCTGTCCTCGCATTGGTTCTGCGTGATTGTCTACGGAATTCTCTTCTA
CACGGATCCCGCCTCGAGTCACCTGTTCAACGACCAGGAGCAAATCCATG
CCTTCTCACAGCATTCCCTGCATTTTGTCAAGCTCCTCGGGTGGACCAAC
GAGAGTTTTCTCACTTTCTTGGGTAGTCTCAAGGATCTGGGTGATGAGCT
CCCCAACATCGAGTGGGCGGAGAAAGTGCAGAGACCCTTGTCGATCCACT
ACACCCAAATGGAGGAAACGAACATAACCGGCGTGGCCAAAGTCATCATG
GATCGGATCCAGAAGGTCAACGTGGGCTCGGATATGCTGACCGAGCTTAT
CATGGTTAACTTAGACGTGCCTCTCTCCCGGAACTTTGCCGCCCGCGGGA
AGATGCTCTGGAGCAAGAAAACCAAGATGGCTTTAGACCACTTTGACGAG
TACAGGAACCTCTCACTCAAGCACAAGGCCTTCATTCACCAAGAATCCCT
TGGTCCGATCATGGGACTCATCGCTTACTGGCACGATAACATCCTCACGC
CCATTAAGCAGTTCAAGCTGGCTTTGGGCAGGCAGGACTTGGATCAGTTC
GAGGTCATGGCCCGCAACGAGGCCCGAAACTGGCAGCCTAGGCACGTGGC
CGTCAAGGAAATATACCCTATGGACTGCAAGGAGCTCGTTCCCTCCATGG
ACCTTGTCCAGGAGGGTTTCAATCGTCTGGGCGACTTTGCCAAGAACATT
GTGGATGAGCACTTCTTCTACCTGTTTTTCCTTTTCGTCCTGTTCCAACC
CTGCTCCAAAGTCAAAGAGCTCGAGTCCGATCCCGTGTCCAACCTGAGTC
GCAAATTCCAATTCATGCTCATTCGACGCTCCAAGATGGATGCTGATGAG
ATCCAGAAGGGCATCGCTGGCATCAATATGATTGCCAAGGGCATCAGCGA
TGCACTCTACATTCTCGAGCAATCCTAA

Synonyms

The feature 'nuclear hormone receptor ftz-f1-like' has the following synonyms


Synonym
Tk00488

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