EMLSAG00000006454, EMLSAG00000006454-689220 (gene) Lepeophtheirus salmonis

Overview


Name	EMLSAG00000006454
Unique Name	EMLSAG00000006454-689220
Type	gene
Organism	Lepeophtheirus salmonis (salmon louse)

Associated RNAi Experiments

Nothing found

Homology

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BLAST of EMLSAG00000006454 vs. GO
Match: - (symbol:LOC100365683 "Protein LOC100365683" species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667 "transcription factor complex" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative regulation of cell proliferation" evidence=IEA] [GO:0042462 "eye photoreceptor cell development" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045872 "positive regulation of rhodopsin gene expression" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0060041 "retina development in camera-type eye" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 RGD:2318602 GO:GO:0005634 GO:GO:0008285 GeneTree:ENSGT00720000108595 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0060041 GO:GO:0042462 GO:GO:0045872 OrthoDB:EOG7WT41C EMBL:AABR06055106 Ensembl:ENSRNOT00000073122 OMA:RRLTYRC Uniprot:M0R4U8)

HSP 1 Score: 62.3882 bits (150), Expect = 8.753e-10
Identity = 62/227 (27.31%), Postives = 88/227 (38.77%), Query Frame = 0

Query:   17 IGDD--DVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDE--KSLKK---ENSVPIHSTNSKFYYDSPVVIAPWSKDIQASIVNEEEEETSIANLPPVEMVFVDEEEEEEDPLVVDXADP-------IIDHVDRSLKETALDVVSWEDQRSILTSGP--DQFSLEE 227
            +G+D   VG  L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+   V  +   +SL +   E+  P      +    SP +  P  +   +           +A+L   E     E E+ E+ + V   DP        +D +  +        V W     + ++ P  DQ  L E
Sbjct:   27 LGEDPTGVGPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMNQDAVQNERQPRSLAQVHLESMEPGSDPRPEPVVASPALAGPSPRGPTSVSAARAMGHHFMASLISAETCAKLEPEDAEENIDVTSNDPEFPASPCNLDGIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLE 241

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BLAST of EMLSAG00000006454 vs. GO
Match: - (symbol:LOC100365683 "nuclear receptor subfamily 2, group E, member 3-like" species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667 "transcription factor complex" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative regulation of cell proliferation" evidence=IEA] [GO:0042462 "eye photoreceptor cell development" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045872 "positive regulation of rhodopsin gene expression" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0060041 "retina development in camera-type eye" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 RGD:2318602 GO:GO:0005634 GO:GO:0008285 GeneTree:ENSGT00720000108595 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0060041 GO:GO:0042462 GO:GO:0045872 OrthoDB:EOG7WT41C EMBL:AABR06055106 Ensembl:ENSRNOT00000073122 OMA:RRLTYRC Uniprot:M0R4U8)

HSP 1 Score: 62.3882 bits (150), Expect = 8.753e-10
Identity = 62/227 (27.31%), Postives = 88/227 (38.77%), Query Frame = 0

Query:   17 IGDD--DVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDE--KSLKK---ENSVPIHSTNSKFYYDSPVVIAPWSKDIQASIVNEEEEETSIANLPPVEMVFVDEEEEEEDPLVVDXADP-------IIDHVDRSLKETALDVVSWEDQRSILTSGP--DQFSLEE 227
            +G+D   VG  L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+   V  +   +SL +   E+  P      +    SP +  P  +   +           +A+L   E     E E+ E+ + V   DP        +D +  +        V W     + ++ P  DQ  L E
Sbjct:   27 LGEDPTGVGPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMNQDAVQNERQPRSLAQVHLESMEPGSDPRPEPVVASPALAGPSPRGPTSVSAARAMGHHFMASLISAETCAKLEPEDAEENIDVTSNDPEFPASPCNLDGIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLE 241

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BLAST of EMLSAG00000006454 vs. GO
Match: - (symbol:Nr2e3 "nuclear receptor subfamily 2, group E, member 3" species:10090 "Mus musculus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription factor complex" evidence=IDA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative regulation of cell proliferation" evidence=IMP] [GO:0042462 "eye photoreceptor cell development" evidence=IMP] [GO:0043401 "steroid hormone mediated signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045872 "positive regulation of rhodopsin gene expression" evidence=IGI] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0060041 "retina development in camera-type eye" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1346317 GO:GO:0005634 GO:GO:0008285 GeneTree:ENSGT00720000108595 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122 GO:GO:0006366 GO:GO:0060041 GO:GO:0030522 GO:GO:0042462 HOGENOM:HOG000260820 HOVERGEN:HBG005606 GO:GO:0045872 eggNOG:NOG277339 OrthoDB:EOG7WT41C TreeFam:TF315716 CTD:10002 KO:K08546 EMBL:AF148129 EMBL:AF204053 EMBL:BC017521 RefSeq:NP_038736.1 UniGene:Mm.103641 ProteinModelPortal:Q9QXZ7 SMR:Q9QXZ7 BioGrid:204819 PhosphoSite:Q9QXZ7 PRIDE:Q9QXZ7 Ensembl:ENSMUST00000034831 GeneID:23958 KEGG:mmu:23958 UCSC:uc009pyu.1 InParanoid:Q9QXZ7 OMA:MLSQHTK NextBio:303796 PRO:PR:Q9QXZ7 ArrayExpress:Q9QXZ7 Bgee:Q9QXZ7 CleanEx:MM_NR2E3 Genevestigator:Q9QXZ7 Uniprot:Q9QXZ7)

HSP 1 Score: 62.003 bits (149), Expect = 1.779e-9
Identity = 61/228 (26.75%), Postives = 88/228 (38.60%), Query Frame = 0

Query:   17 IGDD--DVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHST------NSKFYYDSPVVIAPWSKDIQASIVNEEEEETSIANLPPVEMVFVDEEEEEEDPLVVDXADP-------IIDHVDRSLKETALDVVSWEDQRSILTSGP--DQFSLEE 227
            +G+D   VG  L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+   V  +E+  +    V + +        S+    SP +  P  +   +           +A+L   E     E E+ E+ + V   DP        +D +  +        V W     + ++ P  DQ  L E
Sbjct:   27 LGEDPTGVGPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMNQDAV-QNERQPRSMAQVHLDAMETGSDPRSEPVVASPALAGPSPRGPTSVSATRAMGHHFMASLITAETCAKLEPEDAEENIDVTSNDPEFPASPCSLDGIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLE 241

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BLAST of EMLSAG00000006454 vs. GO
Match: - (symbol:nhr-136 "Nuclear hormone receptor family member nhr-136" species:6239 "Caenorhabditis elegans" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043401 "steroid hormone mediated signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:Z92825 PIR:T19235 RefSeq:NP_506039.2 UniGene:Cel.24860 ProteinModelPortal:O01930 SMR:O01930 PaxDb:O01930 PRIDE:O01930 EnsemblMetazoa:C13C4.3 GeneID:182566 KEGG:cel:CELE_C13C4.3 UCSC:C13C4.3 CTD:182566 WormBase:C13C4.3 eggNOG:NOG252020 GeneTree:ENSGT00530000064480 HOGENOM:HOG000280716 InParanoid:O01930 OMA:FHLLAKA OrthoDB:EOG71VSXJ NextBio:918036 Uniprot:O01930)

HSP 1 Score: 60.077 bits (144), Expect = 6.816e-9
Identity = 48/168 (28.57%), Postives = 74/168 (44.05%), Query Frame = 0

Query:   28 CRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKS-----LKKENSVPIHSTNSKFYYDSPVVIAPWSKDIQASIVNEEEEETSI-----ANLPPVEMVFVDEEEEEEDPLVV 185
            C+VCR     +H Y   +CN C+ FFRR +   RK      C+  +     T+     + L R  C+ACRF  C+  GM+PS +  D K+     L+KE  + I    +  + ++P VI  +   +Q  I      E  I       LPP        +E  + PL++
Sbjct:   53 CKVCRHSATGYH-YDVPSCNGCKTFFRRSILDGRKYT----CLKMRKCLSGTEP----VDLSRRMCRACRFEKCVEAGMNPSAIQADMKTTDGELLRKE--IMIKQKTAVDFLNTPQVIMSFEDKVQGIIGKLTVMELKIEPLYTGGLPPGNRDIRKLDELIDAPLIL 209

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BLAST of EMLSAG00000006454 vs. GO
Match: - (symbol:nr2e3 "nuclear receptor subfamily 2, group E, member 3" species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355 "regulation of transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-041114-63 GO:GO:0005634 GeneTree:ENSGT00720000108595 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 OrthoDB:EOG7WT41C TreeFam:TF315716 OMA:MLSQHTK EMBL:AL929050 ProteinModelPortal:F1QGF3 Ensembl:ENSDART00000127099 PRO:PR:F1QGF3 Bgee:F1QGF3 Uniprot:F1QGF3)

HSP 1 Score: 59.6918 bits (143), Expect = 8.373e-9
Identity = 34/86 (39.53%), Postives = 40/86 (46.51%), Query Frame = 0

Query:   26 LLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLV 111
            LLC+VC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+   V
Sbjct:   44 LLCKVCSDTS-SGKHYGIYACNGCSGFFKRSVRRRLIYR----CQAGTGMCPVDKA-------HRNQCQACRLKKCLQAGMNKDAV 117

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BLAST of EMLSAG00000006454 vs. GO
Match: - (symbol:NR2E3 "Photoreceptor-specific nuclear receptor" species:9913 "Bos taurus" [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820 eggNOG:NOG277339 EMBL:AF107729 UniGene:Bt.241 STRING:9913.ENSBTAP00000048604 InParanoid:Q9TTF0 Uniprot:Q9TTF0)

HSP 1 Score: 59.6918 bits (143), Expect = 8.642e-9
Identity = 35/86 (40.70%), Postives = 40/86 (46.51%), Query Frame = 0

Query:   22 VGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMD 107
            VG  L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+
Sbjct:   33 VGPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMN 106

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BLAST of EMLSAG00000006454 vs. GO
Match: - (symbol:NR2E3 "Photoreceptor-specific nuclear receptor" species:9913 "Bos taurus" [GO:0000122 "negative regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA] [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667 "transcription factor complex" evidence=IEA] [GO:0006351 "transcription, DNA-templated" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative regulation of cell proliferation" evidence=IEA] [GO:0042462 "eye photoreceptor cell development" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045872 "positive regulation of rhodopsin gene expression" evidence=IEA] [GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA] [GO:0060041 "retina development in camera-type eye" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008285 GeneTree:ENSGT00720000108595 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122 GO:GO:0060041 GO:GO:0042462 GO:GO:0045872 OrthoDB:EOG7WT41C TreeFam:TF315716 UniGene:Bt.241 CTD:10002 KO:K08546 OMA:MLSQHTK EMBL:DAAA02027989 RefSeq:NP_001161372.1 Ensembl:ENSBTAT00000018926 GeneID:281944 KEGG:bta:281944 NextBio:20805821 ArrayExpress:F1ML62 Uniprot:F1ML62)

HSP 1 Score: 59.6918 bits (143), Expect = 8.963e-9
Identity = 35/86 (40.70%), Postives = 40/86 (46.51%), Query Frame = 0

Query:   22 VGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMD 107
            VG  L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+
Sbjct:   33 VGPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMN 106

[Close]

BLAST of EMLSAG00000006454 vs. GO
Match: - (symbol:NR2E3 "Photoreceptor-specific nuclear receptor" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006366 "transcription from RNA polymerase II promoter" evidence=TAS] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS] [GO:0007601 "visual perception" evidence=IEA] [GO:0007602 "phototransduction" evidence=TAS] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010467 "gene expression" evidence=TAS] [GO:0030522 "intracellular receptor signaling pathway" evidence=TAS] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] Reactome:REACT_71 InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654 GO:GO:0007601 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 Orphanet:791 GO:GO:0006367 GO:GO:0007602 HOGENOM:HOG000260820 HOVERGEN:HBG005606 eggNOG:NOG277339 EMBL:AF121129 EMBL:AF148128 EMBL:AJ276674 RefSeq:NP_055064.1 RefSeq:NP_057430.1 UniGene:Hs.187354 UniGene:Hs.636007 ProteinModelPortal:Q9Y5X4 SMR:Q9Y5X4 BioGrid:115320 IntAct:Q9Y5X4 MINT:MINT-4302911 STRING:9606.ENSP00000317199 BindingDB:Q9Y5X4 ChEMBL:CHEMBL4374 PhosphoSite:Q9Y5X4 DMDM:8928275 PaxDb:Q9Y5X4 PRIDE:Q9Y5X4 DNASU:10002 GeneID:10002 KEGG:hsa:10002 UCSC:uc002ath.1 CTD:10002 GeneCards:GC15P072084 HGNC:HGNC:7974 MIM:268100 MIM:604485 MIM:611131 neXtProt:NX_Q9Y5X4 Orphanet:53540 PharmGKB:PA31757 InParanoid:Q9Y5X4 KO:K08546 SignaLink:Q9Y5X4 GeneWiki:Photoreceptor_cell-specific_nuclear_receptor GenomeRNAi:10002 NextBio:37775 PRO:PR:Q9Y5X4 CleanEx:HS_NR2E3 Genevestigator:Q9Y5X4 Uniprot:Q9Y5X4)

HSP 1 Score: 59.6918 bits (143), Expect = 9.197e-9
Identity = 43/129 (33.33%), Postives = 56/129 (43.41%), Query Frame = 0

Query:   17 IGDDDVG--EDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHSTNSKFYYDSPVVIAP 143
            +G+D  G    L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+   V  +E+  +    V + S  S        ++AP
Sbjct:   34 LGEDPTGVSPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMNQDAV-QNERQPRSTAQVHLDSMESNTESRPESLVAP 149

[Close]

BLAST of EMLSAG00000006454 vs. GO
Match: - (symbol:NR1I2 "Nuclear receptor subfamily 1, group I, member 2, isoform CRA_c" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0004887 "thyroid hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634 EMBL:CH471052 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006357 GO:GO:0006366 GO:GO:0030522 GO:GO:0004887 EMBL:AC069444 UniGene:Hs.7303 HGNC:HGNC:7968 ProteinModelPortal:H0Y8E2 SMR:H0Y8E2 Ensembl:ENST00000466380 NextBio:35520347 ArrayExpress:H0Y8E2 Uniprot:H0Y8E2)

HSP 1 Score: 59.3066 bits (142), Expect = 1.239e-8
Identity = 34/100 (34.00%), Postives = 46/100 (46.00%), Query Frame = 0

Query:   18 GDDDVGEDLLCRVC--RVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDE 115
             D++VG   +CRVC  +   Y   H+    C  C+ FFRR ++R    N    C   KG   IT          R  CQACR   CL  GM   ++++DE
Sbjct:   31 ADEEVGGPQICRVCGDKATGY---HFNVMTCEGCKGFFRRAMKR----NARLRCPFRKGACEITRKT-------RRQCQACRLRKCLESGMKKEMIMSDE 116

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BLAST of EMLSAG00000006454 vs. GO
Match: - (symbol:NR1I2 "Nuclear receptor subfamily 1 group I member 2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor activity" evidence=IEA] [GO:0003713 "transcription coactivator activity" evidence=TAS] [GO:0004879 "ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=TAS] [GO:0006805 "xenobiotic metabolic process" evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS] [GO:0008144 "drug binding" evidence=IDA] [GO:0008202 "steroid metabolic process" evidence=TAS] [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0010467 "gene expression" evidence=TAS] [GO:0030522 "intracellular receptor signaling pathway" evidence=IDA] [GO:0042738 "exogenous drug catabolic process" evidence=IDA] [GO:0042908 "xenobiotic transport" evidence=IDA] [GO:0043565 "sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative regulation of transcription, DNA-templated" evidence=IDA] [GO:0045893 "positive regulation of transcription, DNA-templated" evidence=IDA] [GO:0046618 "drug export" evidence=IDA] Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0045892 GO:GO:0045893 GO:GO:0005654 GO:GO:0008202 GO:GO:0008144 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0042908 GO:GO:0046618 GO:GO:0003713 GO:GO:0006805 GO:GO:0006367 GO:GO:0042738 DrugBank:DB00783 DrugBank:DB01045 DrugBank:DB00977 DrugBank:DB00163 PDB:1NRL PDB:3CTB PDB:3HVL PDB:4J5X PDBsum:1NRL PDBsum:3CTB PDBsum:3HVL PDBsum:4J5X PDB:2O9I PDBsum:2O9I HOVERGEN:HBG108655 TreeFam:TF316304 EMBL:AY091855 EMBL:AF061056 EMBL:AF084644 EMBL:AF084645 EMBL:AF364606 EMBL:AJ009936 EMBL:AJ009937 EMBL:DQ911122 EMBL:DQ923326 EMBL:EF614253 EMBL:BC017304 RefSeq:NP_003880.3 RefSeq:NP_071285.1 RefSeq:NP_148934.1 UniGene:Hs.7303 PDB:1ILG PDB:1ILH PDB:1M13 PDB:1SKX PDB:2QNV PDB:3R8D PDB:4J5W PDBsum:1ILG PDBsum:1ILH PDBsum:1M13 PDBsum:1SKX PDBsum:2QNV PDBsum:3R8D PDBsum:4J5W DisProt:DP00323 ProteinModelPortal:O75469 SMR:O75469 BioGrid:114380 IntAct:O75469 BindingDB:O75469 ChEMBL:CHEMBL3401 GuidetoPHARMACOLOGY:606 PhosphoSite:O75469 PaxDb:O75469 PRIDE:O75469 Ensembl:ENST00000337940 GeneID:8856 KEGG:hsa:8856 UCSC:uc003edi.3 UCSC:uc003edj.3 CTD:8856 GeneCards:GC03P119499 HGNC:HGNC:7968 MIM:603065 neXtProt:NX_O75469 PharmGKB:PA378 eggNOG:NOG238483 InParanoid:O75469 KO:K08540 OMA:HFKNFRL SignaLink:O75469 EvolutionaryTrace:O75469 GeneWiki:Pregnane_X_receptor GenomeRNAi:8856 NextBio:33249 PRO:PR:O75469 ArrayExpress:O75469 Bgee:O75469 Genevestigator:O75469 Uniprot:O75469)

HSP 1 Score: 59.3066 bits (142), Expect = 1.277e-8
Identity = 34/100 (34.00%), Postives = 46/100 (46.00%), Query Frame = 0

Query:   18 GDDDVGEDLLCRVC--RVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDE 115
             D++VG   +CRVC  +   Y   H+    C  C+ FFRR ++R    N    C   KG   IT          R  CQACR   CL  GM   ++++DE
Sbjct:   31 ADEEVGGPQICRVCGDKATGY---HFNVMTCEGCKGFFRRAMKR----NARLRCPFRKGACEITRKT-------RRQCQACRLRKCLESGMKKEMIMSDE 116

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BLAST of EMLSAG00000006454 vs. C. finmarchicus
Match: gi|592861817|gb|GAXK01095745.1| (TSA: Calanus finmarchicus comp201640_c1_seq1 transcribed RNA sequence)

HSP 1 Score: 53.1434 bits (126), Expect = 5.438e-7
Identity = 45/121 (37.19%), Postives = 60/121 (49.59%), Query Frame = 0

Query:    1 MGPSSSIKVGKRCTSKIGDDDVGEDLLCRVCRVVEYQFHHYGAYACNXXXXXXXXXXXXXXKGNPPTPCITTKGVPPITDAPICDISL-FRGACQACRFLACLNKGMDPSLVLTDEKSLKK 120
            MG +S IK  K   S  G       +LCR+C     +  HYG + C  C+AFFRR V  Q K N    C              C+I++  R  CQ+CRF  C+  GM+PS VL+DE+  K+
Sbjct: 1320 MGANSKIKEQK--VSPGGQQSSEGRILCRICGDSAVRHVHYGGHCCFSCKAFFRRAVNWQNKNNRNFQCKFESK---------CEITIKNRKTCQSCRFKKCMTTGMNPSWVLSDEQRKKR 1649

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BLAST of EMLSAG00000006454 vs. C. finmarchicus
Match: gi|592861822|gb|GAXK01095740.1| (TSA: Calanus finmarchicus comp201640_c0_seq1 transcribed RNA sequence)

HSP 1 Score: 53.1434 bits (126), Expect = 5.438e-7
Identity = 45/121 (37.19%), Postives = 60/121 (49.59%), Query Frame = 0

Query:    1 MGPSSSIKVGKRCTSKIGDDDVGEDLLCRVCRVVEYQFHHYGAYACNXXXXXXXXXXXXXXKGNPPTPCITTKGVPPITDAPICDISL-FRGACQACRFLACLNKGMDPSLVLTDEKSLKK 120
            MG +S IK  K   S  G       +LCR+C     +  HYG + C  C+AFFRR V  Q K N    C              C+I++  R  CQ+CRF  C+  GM+PS VL+DE+  K+
Sbjct:  989 MGANSKIKEQK--VSPGGQQSSEGRILCRICGDSAVRHVHYGGHCCFSCKAFFRRAVNWQNKNNRNFQCKFESK---------CEITIKNRKTCQSCRFKKCMTTGMNPSWVLSDEQRKKR 1318

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BLAST of EMLSAG00000006454 vs. C. finmarchicus
Match: gi|592857755|gb|GAXK01099807.1| (TSA: Calanus finmarchicus comp253537_c2_seq15 transcribed RNA sequence)

HSP 1 Score: 45.0542 bits (105), Expect = 9.390e-5
Identity = 35/100 (35.00%), Postives = 52/100 (52.00%), Query Frame = 0

Query:   28 CRVCRVVEYQFHHYGAYACNXXXXXXXXXXXXXXKGNPPTPCITTKGVPPITDAPICDISL-FRGACQACRFLACLNKGMDPSLVLTD---EKSLKKENS 123
            C++C     +  HYGA  C  CRAFFRR ++            TT          +C+++L  R +CQ CRF+ CL  GM+P+ VL++   ++  KK NS
Sbjct:  232 CKICHEAAARHVHYGAMTCFSCRAFFRRSLQN-----------TTSARYKCMRQSMCEMNLKTRKSCQYCRFMKCLAVGMNPNYVLSEDERKRRFKKRNS 498

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BLAST of EMLSAG00000006454 vs. C. finmarchicus
Match: gi|592755910|gb|GAXK01198503.1| (TSA: Calanus finmarchicus comp507525_c2_seq3 transcribed RNA sequence)

HSP 1 Score: 46.2098 bits (108), Expect = 9.397e-5
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 0

Query:   84 CDISLF-RGACQACRFLACLNKGMDPSLVLTDEKSLKK 120
            CD+SL  R +CQACR+  C+  GM P LVL+DE+  K+
Sbjct:  556 CDVSLANRRSCQACRYKKCIAAGMKPGLVLSDEQCSKR 669

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BLAST of EMLSAG00000006454 vs. C. finmarchicus
Match: gi|592755912|gb|GAXK01198501.1| (TSA: Calanus finmarchicus comp507525_c2_seq1 transcribed RNA sequence)

HSP 1 Score: 46.2098 bits (108), Expect = 9.566e-5
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 0

Query:   84 CDISLF-RGACQACRFLACLNKGMDPSLVLTDEKSLKK 120
            CD+SL  R +CQACR+  C+  GM P LVL+DE+  K+
Sbjct:  556 CDVSLANRRSCQACRYKKCIAAGMKPGLVLSDEQCSKR 669

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BLAST of EMLSAG00000006454 vs. C. finmarchicus
Match: gi|592755909|gb|GAXK01198504.1| (TSA: Calanus finmarchicus comp507525_c2_seq4 transcribed RNA sequence)

HSP 1 Score: 46.2098 bits (108), Expect = 9.792e-5
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 0

Query:   84 CDISLF-RGACQACRFLACLNKGMDPSLVLTDEKSLKK 120
            CD+SL  R +CQACR+  C+  GM P LVL+DE+  K+
Sbjct:  556 CDVSLANRRSCQACRYKKCIAAGMKPGLVLSDEQCSKR 669

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BLAST of EMLSAG00000006454 vs. C. finmarchicus
Match: gi|592755911|gb|GAXK01198502.1| (TSA: Calanus finmarchicus comp507525_c2_seq2 transcribed RNA sequence)

HSP 1 Score: 46.2098 bits (108), Expect = 9.971e-5
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 0

Query:   84 CDISLF-RGACQACRFLACLNKGMDPSLVLTDEKSLKK 120
            CD+SL  R +CQACR+  C+  GM P LVL+DE+  K+
Sbjct:  556 CDVSLANRRSCQACRYKKCIAAGMKPGLVLSDEQCSKR 669

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BLAST of EMLSAG00000006454 vs. C. finmarchicus
Match: gi|592818252|gb|GAXK01136316.1| (TSA: Calanus finmarchicus comp619954_c2_seq4 transcribed RNA sequence)

HSP 1 Score: 45.0542 bits (105), Expect = 1.115e-4
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 0

Query:   84 CDISLF-RGACQACRFLACLNKGMDPSLVLTDEKSLKK 120
            CD+SL  R +CQACR+  C+  GM P LVL+D++  KK
Sbjct:   58 CDVSLANRRSCQACRYKKCVASGMKPGLVLSDDQCHKK 171

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BLAST of EMLSAG00000006454 vs. C. finmarchicus
Match: gi|592818253|gb|GAXK01136315.1| (TSA: Calanus finmarchicus comp619954_c2_seq3 transcribed RNA sequence)

HSP 1 Score: 45.4394 bits (106), Expect = 1.123e-4
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 0

Query:   84 CDISLF-RGACQACRFLACLNKGMDPSLVLTDEKSLKK 120
            CD+SL  R +CQACR+  C+  GM P LVL+D++  KK
Sbjct:   58 CDVSLANRRSCQACRYKKCVASGMKPGLVLSDDQCHKK 171

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BLAST of EMLSAG00000006454 vs. C. finmarchicus
Match: gi|592818254|gb|GAXK01136314.1| (TSA: Calanus finmarchicus comp619954_c2_seq2 transcribed RNA sequence)

HSP 1 Score: 45.4394 bits (106), Expect = 1.295e-4
Identity = 20/38 (52.63%), Postives = 27/38 (71.05%), Query Frame = 0

Query:   84 CDISLF-RGACQACRFLACLNKGMDPSLVLTDEKSLKK 120
            CD+SL  R +CQACR+  C+  GM P LVL+D++  KK
Sbjct:   58 CDVSLANRRSCQACRYKKCVASGMKPGLVLSDDQCHKK 171

[Close]

BLAST of EMLSAG00000006454 vs. L. salmonis peptides
Match: EMLSAP00000006454 (pep:novel supercontig:LSalAtl2s:LSalAtl2s3535:4892:6220:-1 gene:EMLSAG00000006454 transcript:EMLSAT00000006454 description:"maker-LSalAtl2s3535-snap-gene-0.8")

HSP 1 Score: 616.305 bits (1588), Expect = 0.000e+0
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0

Query:    1 MGPSSSIKVGKRCTSKIGDDDVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHSTNSKFYYDSPVVIAPWSKDIQASIVNEEEEETSIANLPPVEMVFVDEEEEEEDPLVVDXADPIIDHVDRSLKETALDVVSWEDQRSILTSGPDQFSLEELYKFVEEHPQQEYEQEIKPLRFDEYDKGLQTPSFEGLNTPSYDHQLENTVLNFSFSVPEMESSSLLDDMLDN 299
            MGPSSSIKVGKRCTSKIGDDDVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHSTNSKFYYDSPVVIAPWSKDIQASIVNEEEEETSIANLPPVEMVFVDEEEEEEDPLVVDXADPIIDHVDRSLKETALDVVSWEDQRSILTSGPDQFSLEELYKFVEEHPQQEYEQEIKPLRFDEYDKGLQTPSFEGLNTPSYDHQLENTVLNFSFSVPEMESSSLLDDMLDN
Sbjct:    1 MGPSSSIKVGKRCTSKIGDDDVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHSTNSKFYYDSPVVIAPWSKDIQASIVNEEEEETSIANLPPVEMVFVDEEEEEEDPLVVDXADPIIDHVDRSLKETALDVVSWEDQRSILTSGPDQFSLEELYKFVEEHPQQEYEQEIKPLRFDEYDKGLQTPSFEGLNTPSYDHQLENTVLNFSFSVPEMESSSLLDDMLDN 299

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BLAST of EMLSAG00000006454 vs. L. salmonis peptides
Match: EMLSAP00000004174 (pep:novel supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5")

HSP 1 Score: 64.3142 bits (155), Expect = 9.214e-12
Identity = 38/102 (37.25%), Postives = 48/102 (47.06%), Query Frame = 0

Query:   27 LCRVCRVVEYQFHHYGAYACNRCRAFFRRMVR-------RQRKGNP--PTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKSLK 119
            +CR+C  +    +HYGA AC  CRAFF R V        R  +GNP     C+ TK                R  CQ CR+  CL+ GM PS V T E+ L+
Sbjct:  136 VCRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKAT--------------RTHCQFCRYRGCLSAGMXPSYVTTAEERLQ 223

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BLAST of EMLSAG00000006454 vs. L. salmonis peptides
Match: EMLSAP00000010267 (pep:novel supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19")

HSP 1 Score: 57.3806 bits (137), Expect = 1.574e-9
Identity = 37/127 (29.13%), Postives = 59/127 (46.46%), Query Frame = 0

Query:    4 SSSIKVGKRCTSKIGDDDVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISL-FRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHST 129
            SS I +G++   +          LC++C  V  +  +YG   C  CRAFFRR V+            + K     +    C I+L  R ACQ CRF  C++ GM  S V  D +   K++++ +++ 
Sbjct:   93 SSQIIIGRQALPR----------LCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNN----------SYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSKKSAMTLNNN 199

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BLAST of EMLSAG00000006454 vs. L. salmonis peptides
Match: EMLSAP00000011907 (pep:novel supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22")

HSP 1 Score: 56.6102 bits (135), Expect = 3.012e-9
Identity = 33/104 (31.73%), Postives = 52/104 (50.00%), Query Frame = 0

Query:   27 LCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISL-FRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHST 129
            LC++C  V  +  +YG   C  CRAFFRR V+            + K     +    C I+L  R +CQ CRF  C++ GM  S VL D +   K++++ +++ 
Sbjct:  105 LCQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNN----------SYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERRSKKSAMILNNN 198

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BLAST of EMLSAG00000006454 vs. L. salmonis peptides
Match: EMLSAP00000012651 (pep:novel supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24")

HSP 1 Score: 55.0694 bits (131), Expect = 7.648e-9
Identity = 34/92 (36.96%), Postives = 44/92 (47.83%), Query Frame = 0

Query:   25 DLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISL-FRGACQACRFLACLNKGMDPSLVLTDE 115
            +++C VC        HYG  AC  CRAFFRR V +         C T +          C I++  R  CQ CR+  CL  GM PS VL++E
Sbjct:   88 EMVCNVCGDKAPDHIHYGGIACFSCRAFFRRSVPKH----TTYFCSTDQA---------CMITITTRKNCQFCRYKKCLESGMKPSWVLSEE 166

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BLAST of EMLSAG00000006454 vs. L. salmonis peptides
Match: EMLSAP00000008261 (pep:novel supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3")

HSP 1 Score: 50.8322 bits (120), Expect = 1.845e-7
Identity = 30/87 (34.48%), Postives = 35/87 (40.23%), Query Frame = 0

Query:   28 CRVCRVVEYQFHHYGAYACNRCRAFFRRMV--RRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVL 112
            C +C        HYGA AC  CRAFFRR V    +   +    C  TK                R  CQ CRF  CL  GM  + V+
Sbjct:   63 CHICSDTANDHIHYGAIACXSCRAFFRRAVICNAEYHCSRDKTCFITKET--------------RKHCQFCRFNKCLEAGMKNTWVM 135

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BLAST of EMLSAG00000006454 vs. L. salmonis peptides
Match: EMLSAP00000009969 (pep:novel supercontig:LSalAtl2s:LSalAtl2s651:302705:304416:-1 gene:EMLSAG00000009969 transcript:EMLSAT00000009969 description:"maker-LSalAtl2s651-augustus-gene-2.5")

HSP 1 Score: 49.6766 bits (117), Expect = 4.518e-7
Identity = 34/110 (30.91%), Postives = 47/110 (42.73%), Query Frame = 0

Query:   25 DLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHSTNSKFY 134
            ++LC VC   +    HYG + C  C++FF+R VRR         C + K  P             R  CQ CRF  CLN GM    V   +K      S PI + ++  +
Sbjct:   72 EILCVVCGD-KSSGKHYGQFTCEGCKSFFKRCVRRSLTFQ----CRSKKSCPVDQH--------HRNQCQHCRFKKCLNMGMKKEAV---QKGRTTTTSAPIFNYSNDLF 165

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BLAST of EMLSAG00000006454 vs. SwissProt
Match: gi|10720145|sp|Q9QXZ7.1|NR2E3_MOUSE (RecName: Full=Photoreceptor-specific nuclear receptor; AltName: Full=Nuclear receptor subfamily 2 group E member 3; AltName: Full=Retina-specific nuclear receptor)

HSP 1 Score: 62.003 bits (149), Expect = 1.267e-9
Identity = 61/228 (26.75%), Postives = 88/228 (38.60%), Query Frame = 0

Query:   17 IGDD--DVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHST------NSKFYYDSPVVIAPWSKDIQASIVNEEEEETSIANLPPVEMVFVDEEEEEEDPLVVDXADP-------IIDHVDRSLKETALDVVSWEDQRSILTSGP--DQFSLEE 227
            +G+D   VG  L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+   V  +E+  +    V + +        S+    SP +  P  +   +           +A+L   E     E E+ E+ + V   DP        +D +  +        V W     + ++ P  DQ  L E
Sbjct:   27 LGEDPTGVGPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMNQDAV-QNERQPRSMAQVHLDAMETGSDPRSEPVVASPALAGPSPRGPTSVSATRAMGHHFMASLITAETCAKLEPEDAEENIDVTSNDPEFPASPCSLDGIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLE 241

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BLAST of EMLSAG00000006454 vs. SwissProt
Match: gi|109937698|sp|O01930.2|NH136_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-136)

HSP 1 Score: 60.077 bits (144), Expect = 4.936e-9
Identity = 48/168 (28.57%), Postives = 74/168 (44.05%), Query Frame = 0

Query:   28 CRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKS-----LKKENSVPIHSTNSKFYYDSPVVIAPWSKDIQASIVNEEEEETSI-----ANLPPVEMVFVDEEEEEEDPLVV 185
            C+VCR     +H Y   +CN C+ FFRR +   RK      C+  +     T+     + L R  C+ACRF  C+  GM+PS +  D K+     L+KE  + I    +  + ++P VI  +   +Q  I      E  I       LPP        +E  + PL++
Sbjct:   53 CKVCRHSATGYH-YDVPSCNGCKTFFRRSILDGRKYT----CLKMRKCLSGTEP----VDLSRRMCRACRFEKCVEAGMNPSAIQADMKTTDGELLRKE--IMIKQKTAVDFLNTPQVIMSFEDKVQGIIGKLTVMELKIEPLYTGGLPPGNRDIRKLDELIDAPLIL 209

[Close]

BLAST of EMLSAG00000006454 vs. SwissProt
Match: gi|263506139|sp|Q9TTF0.2|NR2E3_BOVIN (RecName: Full=Photoreceptor-specific nuclear receptor; AltName: Full=Nuclear receptor subfamily 2 group E member 3; AltName: Full=Retina-specific nuclear receptor)

HSP 1 Score: 59.6918 bits (143), Expect = 6.212e-9
Identity = 35/86 (40.70%), Postives = 40/86 (46.51%), Query Frame = 0

Query:   22 VGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMD 107
            VG  L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+
Sbjct:   33 VGPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMN 106

[Close]

BLAST of EMLSAG00000006454 vs. SwissProt
Match: gi|8928275|sp|Q9Y5X4.1|NR2E3_HUMAN (RecName: Full=Photoreceptor-specific nuclear receptor; AltName: Full=Nuclear receptor subfamily 2 group E member 3; AltName: Full=Retina-specific nuclear receptor)

HSP 1 Score: 59.6918 bits (143), Expect = 6.609e-9
Identity = 43/129 (33.33%), Postives = 56/129 (43.41%), Query Frame = 0

Query:   17 IGDDDVG--EDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHSTNSKFYYDSPVVIAP 143
            +G+D  G    L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+   V  +E+  +    V + S  S        ++AP
Sbjct:   34 LGEDPTGVSPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMNQDAV-QNERQPRSTAQVHLDSMESNTESRPESLVAP 149

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BLAST of EMLSAG00000006454 vs. SwissProt
Match: gi|6093860|sp|O75469.1|NR1I2_HUMAN (RecName: Full=Nuclear receptor subfamily 1 group I member 2; AltName: Full=Orphan nuclear receptor PAR1; AltName: Full=Orphan nuclear receptor PXR; AltName: Full=Pregnane X receptor; AltName: Full=Steroid and xenobiotic receptor; Short=SXR)

HSP 1 Score: 59.3066 bits (142), Expect = 9.242e-9
Identity = 34/100 (34.00%), Postives = 46/100 (46.00%), Query Frame = 0

Query:   18 GDDDVGEDLLCRVC--RVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDE 115
             D++VG   +CRVC  +   Y   H+    C  C+ FFRR ++R    N    C   KG   IT          R  CQACR   CL  GM   ++++DE
Sbjct:   31 ADEEVGGPQICRVCGDKATGY---HFNVMTCEGCKGFFRRAMKR----NARLRCPFRKGACEITRKT-------RRQCQACRLRKCLESGMKKEMIMSDE 116

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BLAST of EMLSAG00000006454 vs. SwissProt
Match: gi|75065697|sp|Q8SQ01.1|NR1I2_MACMU (RecName: Full=Nuclear receptor subfamily 1 group I member 2; AltName: Full=Orphan nuclear receptor PXR; AltName: Full=Pregnane X receptor)

HSP 1 Score: 56.9954 bits (136), Expect = 5.249e-8
Identity = 33/99 (33.33%), Postives = 45/99 (45.45%), Query Frame = 0

Query:   18 GDDDVGEDLLCRVC--RVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTD 114
             D++VG   +CRVC  +   Y   H+    C  C+ FFRR ++R    N    C   KG   IT          R  CQACR   CL  GM   ++++D
Sbjct:   31 ADEEVGGPQICRVCGDKATGY---HFNVMTCEGCKGFFRRAMKR----NARLRCPFRKGACEITRKT-------RRQCQACRLRKCLESGMKKEMIMSD 115

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BLAST of EMLSAG00000006454 vs. SwissProt
Match: gi|10720385|sp|Q20765.2|NHR7_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-7)

HSP 1 Score: 54.299 bits (129), Expect = 4.996e-7
Identity = 35/99 (35.35%), Postives = 46/99 (46.46%), Query Frame = 0

Query:   27 LCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLF-RGACQACRFLACLNKGMDPSLVLTDEKSLKKENSV 124
            +C VC     + H YG  AC  C+ FFRR V+    G     C   K          C+++ F R AC+ CRF  CL  GM+P  V  D +  KK  +V
Sbjct:    8 ICAVCGDTPAKIH-YGVLACFGCKGFFRRAVK---DGRNKYVCRFEKN---------CEVTKFERNACRYCRFRKCLLVGMNPDYVRPDREKSKKGKTV 93

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BLAST of EMLSAG00000006454 vs. Select Arthropod Genomes
Match: gb|EEC00893.1| (retinoid X receptor, putative, partial [Ixodes scapularis])

HSP 1 Score: 53.9138 bits (128), Expect = 2.565e-7
Identity = 32/91 (35.16%), Postives = 51/91 (56.04%), Query Frame = 0

Query:   29 RVCRVV--EYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLF-RGACQACRFLACLNKGMDPSLVLTDEK 116
            RVC V     + +H+G  +C+ C+AFFRR V+ + +   P      +G         C I+L  R +CQACRF  CL+ GM+ S V+++++
Sbjct:   88 RVCGVCGDRAKSYHFGGISCDSCKAFFRRSVQNEARFTCPY-----QGR--------CHITLTSRKSCQACRFAKCLSIGMEASWVMSEQE 165

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BLAST of EMLSAG00000006454 vs. Select Arthropod Genomes
Match: EAA12047.4 (AGAP000819-PA [Anopheles gambiae str. PEST])

HSP 1 Score: 53.5286 bits (127), Expect = 3.403e-7
Identity = 30/83 (36.14%), Postives = 40/83 (48.19%), Query Frame = 0

Query:   25 DLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMD 107
            D+ C+VCR       HYG YAC+ C  FF+R +RR R+      C +   VP + D         R  C+ACR   C   GM+
Sbjct:   30 DVPCKVCRD-HSSGKHYGIYACDGCAGFFKRSIRRSRQ----YVCKSKSEVPCVVD------KTHRNQCRACRLKKCFEVGMN 101

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BLAST of EMLSAG00000006454 vs. Select Arthropod Genomes
Match: gb|KFM66780.1| (Vitamin D3 receptor B, partial [Stegodyphus mimosarum])

HSP 1 Score: 53.5286 bits (127), Expect = 4.406e-7
Identity = 28/82 (34.15%), Postives = 44/82 (53.66%), Query Frame = 0

Query:   39 HHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLF-RGACQACRFLACLNKGMDPSLVLTDEKSLK 119
            +H+G  +C+ C+AFFRR V+ +   N   P               C+I++  R  CQ CRF  CL+ GM+   V+T+E+ L+
Sbjct:   73 YHFGGISCDSCKAFFRRSVQNEAYKNFHCPY-----------EGKCEITITSRKCCQYCRFKKCLSIGMETGWVMTEEERLQ 143

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BLAST of EMLSAG00000006454 vs. nr
Match: gi|532051570|ref|XP_005368541.1| (PREDICTED: photoreceptor-specific nuclear receptor [Microtus ochrogaster])

HSP 1 Score: 65.4698 bits (158), Expect = 2.068e-8
Identity = 63/228 (27.63%), Postives = 89/228 (39.04%), Query Frame = 0

Query:   17 IGDD--DVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHSTNSKF------YYDSPVVIAPWSKDIQASIVNEEEEETSIANLPPVEMVFVDEEEEEEDPLVVDXADP-------IIDHVDRSLKETALDVVSWEDQRSILTSGP--DQFSLEE 227
            +G+D   VG  L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+   V  +E+  +    V + S  +           SP +  P S+   +S          +A+L   E     E E+ E+ + V   DP        +D +  +        V W     + ++ P  DQ  L E
Sbjct:   27 LGEDPTGVGPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMNQDAV-QNERQPRSMAHVQLDSMETGNDPRPEPLAASPALAGPSSQGPTSSSAARAMGHHFMASLITAETCAKLEPEDAEENIDVTSNDPEFPASPCSLDGIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLE 241

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BLAST of EMLSAG00000006454 vs. nr
Match: gi|344248427|gb|EGW04531.1| (Photoreceptor-specific nuclear receptor [Cricetulus griseus])

HSP 1 Score: 65.0846 bits (157), Expect = 2.419e-8
Identity = 63/228 (27.63%), Postives = 88/228 (38.60%), Query Frame = 0

Query:   17 IGDD--DVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHSTNSKF------YYDSPVVIAPWSKDIQASIVNEEEEETSIANLPPVEMVFVDEEEEEEDPLVVDXADP-------IIDHVDRSLKETALDVVSWEDQRSILTSGP--DQFSLEE 227
            +G+D   VG  L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+   V  +E+  +    V + S  +           SP +  P  +   +S          +A+L   E     E E+ E+ + V   DP        +D +  +        V W     + +S P  DQ  L E
Sbjct:   27 LGEDPTGVGPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMNQDAV-QNERQPRSMAQVHLDSMEAGSDPRPEPLVASPALAGPSPRGPTSSSAARAMGHHFMASLITAETCAKLEPEDAEENIDVTSNDPEFPASPCNLDGIHETSARLLFMAVKWAKNLPVFSSLPFRDQVILLE 241

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BLAST of EMLSAG00000006454 vs. nr
Match: gi|354473494|ref|XP_003498970.1| (PREDICTED: photoreceptor-specific nuclear receptor [Cricetulus griseus] >gi|625288992|ref|XP_007636248.1| PREDICTED: photoreceptor-specific nuclear receptor [Cricetulus griseus])

HSP 1 Score: 65.0846 bits (157), Expect = 2.784e-8
Identity = 63/228 (27.63%), Postives = 88/228 (38.60%), Query Frame = 0

Query:   17 IGDD--DVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHSTNSKF------YYDSPVVIAPWSKDIQASIVNEEEEETSIANLPPVEMVFVDEEEEEEDPLVVDXADP-------IIDHVDRSLKETALDVVSWEDQRSILTSGP--DQFSLEE 227
            +G+D   VG  L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+   V  +E+  +    V + S  +           SP +  P  +   +S          +A+L   E     E E+ E+ + V   DP        +D +  +        V W     + +S P  DQ  L E
Sbjct:   35 LGEDPTGVGPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMNQDAV-QNERQPRSMAQVHLDSMEAGSDPRPEPLVASPALAGPSPRGPTSSSAARAMGHHFMASLITAETCAKLEPEDAEENIDVTSNDPEFPASPCNLDGIHETSARLLFMAVKWAKNLPVFSSLPFRDQVILLE 249

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BLAST of EMLSAG00000006454 vs. nr
Match: gi|281353714|gb|EFB29298.1| (hypothetical protein PANDA_011329, partial [Ailuropoda melanoleuca])

HSP 1 Score: 64.6994 bits (156), Expect = 2.931e-8
Identity = 41/111 (36.94%), Postives = 52/111 (46.85%), Query Frame = 0

Query:   21 DVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHSTNS 131
             VG  L CRVC        HYG YACN C  FF+R VRR+ +      C    G+ P+  A        R  CQACR   CL +GM+   V  +E+  +    V + ST S
Sbjct:   15 GVGPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRTVRRRLR------CQVGAGMCPVDKA-------HRNQCQACRLKKCLQEGMNQDAV-QNERQPRSTAQVRLASTES 110

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BLAST of EMLSAG00000006454 vs. nr
Match: gi|589916417|ref|XP_006971529.1| (PREDICTED: photoreceptor-specific nuclear receptor [Peromyscus maniculatus bairdii])

HSP 1 Score: 63.929 bits (154), Expect = 6.575e-8
Identity = 62/228 (27.19%), Postives = 87/228 (38.16%), Query Frame = 0

Query:   17 IGDD--DVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHSTNSKF------YYDSPVVIAPWSKDIQASIVNEEEEETSIANLPPVEMVFVDEEEEEEDPLVVDXADP-------IIDHVDRSLKETALDVVSWEDQRSILTSGP--DQFSLEE 227
            +G+D   VG  L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+   V  +E+  +    V +    +           SP +  P  +   AS          +A+L   E     E E+ E+ + V   DP        +D +  +        V W     + ++ P  DQ  L E
Sbjct:   25 LGEDPTGVGPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMNQDAV-QNERQPRSMAQVQLDGMEAGSDPRPEPLVASPALAGPSPRGPTASSAARAMGHHFMASLITAETCAKLEPEDAEENIDVTSNDPEFPASPCGLDGIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLE 239

[Close]

BLAST of EMLSAG00000006454 vs. nr
Match: gi|1079711622|ref|XP_018535680.1| (PREDICTED: photoreceptor-specific nuclear receptor-like [Lates calcarifer])

HSP 1 Score: 63.1586 bits (152), Expect = 1.293e-7
Identity = 36/97 (37.11%), Postives = 45/97 (46.39%), Query Frame = 0

Query:   15 SKIGDDDVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLV 111
            S +    +G+ LLC+VC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+   V
Sbjct:   28 SSVPGKALGQGLLCKVCSD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQAGTGMCPVDKA-------HRNQCQACRLKKCLQAGMNKDAV 112

[Close]

BLAST of EMLSAG00000006454 vs. nr
Match: gi|149041874|gb|EDL95715.1| (rCG58152 [Rattus norvegicus])

HSP 1 Score: 61.6178 bits (148), Expect = 1.311e-7
Identity = 58/218 (26.61%), Postives = 84/218 (38.53%), Query Frame = 0

Query:   17 IGDD--DVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDE--KSLKK---ENSVPIHSTNSKFYYDSPVVIAPWSKDIQASIVNEEEEETSIANLPPVEMVFVDEEEEEEDPLVVDXADP-------IIDHVDRSLKETALDVVSWEDQRSILTSGP 220
            +G+D   VG  L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+   V  +   +SL +   E+  P      +    SP +  P  +   +           +A+L   E     E E+ E+ + V   DP        +D +  +        V W     + ++ P
Sbjct:   27 LGEDPTGVGPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMNQDAVQNERQPRSLAQVHLESMEPGSDPRPEPVVASPALAGPSPRGPTSVSAARAMGHHFMASLISAETCAKLEPEDAEENIDVTSNDPEFPASPCNLDGIHETSARLLFMAVKWAKNLPVFSNLP 232

[Close]

BLAST of EMLSAG00000006454 vs. nr
Match: gi|560911655|ref|XP_006182118.1| (PREDICTED: photoreceptor-specific nuclear receptor [Camelus ferus])

HSP 1 Score: 62.7734 bits (151), Expect = 1.501e-7
Identity = 35/91 (38.46%), Postives = 43/91 (47.25%), Query Frame = 0

Query:   17 IGDDDVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMD 107
            +G++  G  L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+
Sbjct:   82 LGEEPTGPSLQCRVCGDTSSG-KHYGIYACNGCSGFFKRSVRRRLMYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMN 160

[Close]

BLAST of EMLSAG00000006454 vs. nr
Match: gi|672062391|ref|XP_008764597.1| (PREDICTED: LOW QUALITY PROTEIN: photoreceptor-specific nuclear receptor isoform X1 [Rattus norvegicus])

HSP 1 Score: 62.3882 bits (150), Expect = 1.709e-7
Identity = 62/227 (27.31%), Postives = 88/227 (38.77%), Query Frame = 0

Query:   17 IGDD--DVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDE--KSLKK---ENSVPIHSTNSKFYYDSPVVIAPWSKDIQASIVNEEEEETSIANLPPVEMVFVDEEEEEEDPLVVDXADP-------IIDHVDRSLKETALDVVSWEDQRSILTSGP--DQFSLEE 227
            +G+D   VG  L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+   V  +   +SL +   E+  P      +    SP +  P  +   +           +A+L   E     E E+ E+ + V   DP        +D +  +        V W     + ++ P  DQ  L E
Sbjct:   27 LGEDPTGVGPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMNQDAVQNERQPRSLAQVHLESMEPGSDPRPEPVVASPALAGPSPRGPTSVSAARAMGHHFMASLISAETCAKLEPEDAEENIDVTSNDPEFPASPCNLDGIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLE 241

[Close]

BLAST of EMLSAG00000006454 vs. nr
Match: gi|293349263|ref|XP_002727107.1| (PREDICTED: photoreceptor-specific nuclear receptor isoform X2 [Rattus norvegicus])

HSP 1 Score: 62.3882 bits (150), Expect = 1.908e-7
Identity = 62/227 (27.31%), Postives = 88/227 (38.77%), Query Frame = 0

Query:   17 IGDD--DVGEDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDE--KSLKK---ENSVPIHSTNSKFYYDSPVVIAPWSKDIQASIVNEEEEETSIANLPPVEMVFVDEEEEEEDPLVVDXADP-------IIDHVDRSLKETALDVVSWEDQRSILTSGP--DQFSLEE 227
            +G+D   VG  L CRVC        HYG YACN C  FF+R VRR+        C    G+ P+  A        R  CQACR   CL  GM+   V  +   +SL +   E+  P      +    SP +  P  +   +           +A+L   E     E E+ E+ + V   DP        +D +  +        V W     + ++ P  DQ  L E
Sbjct:   27 LGEDPTGVGPSLQCRVCGD-SSSGKHYGIYACNGCSGFFKRSVRRRLIYR----CQVGAGMCPVDKA-------HRNQCQACRLKKCLQAGMNQDAVQNERQPRSLAQVHLESMEPGSDPRPEPVVASPALAGPSPRGPTSVSAARAMGHHFMASLISAETCAKLEPEDAEENIDVTSNDPEFPASPCNLDGIHETSARLLFMAVKWAKNLPVFSNLPFRDQVILLE 241

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BLAST of EMLSAG00000006454 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold59_size442576-processed-gene-0.4 (protein:Tk11663 transcript:snap_masked-scaffold59_size442576-processed-gene-0.4-mRNA-1 annotation:"hypothetical protein BRAFLDRAFT_128090")

HSP 1 Score: 63.929 bits (154), Expect = 1.488e-11
Identity = 36/90 (40.00%), Postives = 46/90 (51.11%), Query Frame = 0

Query:   27 LCRVCRVVEYQFH-HYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISL-FRGACQACRFLACLNKGMDPSLVLTD 114
            +C VC      +H +YGA AC  CRAFFRR ++R R  NP   C          +   C+I++  R  CQ CRF  C+  GM P  VL D
Sbjct:   20 ICSVCFGEAETYHLNYGASACFSCRAFFRRTIQRSR--NPVFHC---------KNGGTCEINVQTRRKCQGCRFRNCIRAGMQPDQVLND 98

[Close]

BLAST of EMLSAG00000006454 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold42_size484952-snap-gene-3.25 (protein:Tk06368 transcript:maker-scaffold42_size484952-snap-gene-3.25-mRNA-1 annotation:"retinoid x")

HSP 1 Score: 63.1586 bits (152), Expect = 2.284e-11
Identity = 36/98 (36.73%), Postives = 53/98 (54.08%), Query Frame = 0

Query:   27 LCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDI-SLFRGACQACRFLACLNKGMDPSLVLTD-EKSLKKEN 122
            LC+VC +   + ++YG   C  CRAFFRR V+ Q   + PT      G         CDI S  R +C  CR+  CL  GM+P  +++D E+ +K+E+
Sbjct:  530 LCQVCGLHAGKHNYYGGQVCESCRAFFRRSVQNQ---SYPTYMCKASGA--------CDIDSKSRRSCACCRYEKCLEAGMNPKWIISDEERRVKREH 616

[Close]

BLAST of EMLSAG00000006454 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold267_size230776-snap-gene-1.25 (protein:Tk02974 transcript:maker-scaffold267_size230776-snap-gene-1.25-mRNA-1 annotation:"vitamin d3 receptor b")

HSP 1 Score: 62.003 bits (149), Expect = 4.912e-11
Identity = 38/99 (38.38%), Postives = 46/99 (46.46%), Query Frame = 0

Query:   24 EDLLCRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTK--GVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEKSLKK 120
            + L+C VC        HYG  AC  CRAFFRR V + R       C +     V P T          R  CQ CRF  CL  GM  S VL+DE+ L++
Sbjct:  146 KHLMCHVCGDKAPNHCHYGGIACFSCRAFFRRSVPKHRSYT----CSSNNQCAVTPAT----------RKNCQKCRFDKCLGAGMKASWVLSDEEKLER 230

[Close]

BLAST of EMLSAG00000006454 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold89_size390429-processed-gene-2.6 (protein:Tk12451 transcript:snap_masked-scaffold89_size390429-processed-gene-2.6-mRNA-1 annotation:"heparan sulfate 2-o-sulfotransferase pipe")

HSP 1 Score: 62.3882 bits (150), Expect = 4.995e-11
Identity = 45/116 (38.79%), Postives = 55/116 (47.41%), Query Frame = 0

Query:    7 IKVGKRCTSKI-GDDDVGEDLLCRVCRVVEYQFH-HYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKG----VPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDEK 116
            IK  + C  K  GDD + ++  C VC +    FH +YGA  C  CRAFFRR + R R  NP   C   KG    V P T          R +C+ CRF  CL  GM    VL D +
Sbjct:    4 IKRKRVCIPKGEGDDTLPKE--CAVCGITSETFHLNYGASTCFSCRAFFRRAIERSR--NPKFVC--KKGGTCEVNPTT----------RKSCRKCRFNKCLEAGMKTDFVLDDSQ 103

[Close]

BLAST of EMLSAG00000006454 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold14_size734282-processed-gene-6.3 (protein:Tk11309 transcript:snap_masked-scaffold14_size734282-processed-gene-6.3-mRNA-1 annotation:"hypothetical protein DAPPUDRAFT_8442")

HSP 1 Score: 62.003 bits (149), Expect = 6.199e-11
Identity = 33/103 (32.04%), Postives = 52/103 (50.49%), Query Frame = 0

Query:   28 CRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDIS-LFRGACQACRFLACLNKGMDPSLVLTDEKSLKKENSVPIHST 129
            C +C+  E  F HYG  +C  CRAFFRR  ++ R   P   C++            C+I+ L R  C+ CR+  CL  GM P LVL   +  ++ + + ++ +
Sbjct:   65 CPICKSTEPHFLHYGGISCYSCRAFFRRAHQKTR--TPQFTCLSGGS---------CEINVLTRKDCRKCRYDLCLKVGMRPQLVLDGSQKRRRFHGMILNRS 156

[Close]

BLAST of EMLSAG00000006454 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold464_size163657-processed-gene-0.15 (protein:Tk05278 transcript:snap_masked-scaffold464_size163657-processed-gene-0.15-mRNA-1 annotation:"nuclear receptor subfamily 1 group i member 2-like")

HSP 1 Score: 61.6178 bits (148), Expect = 7.606e-11
Identity = 37/93 (39.78%), Postives = 45/93 (48.39%), Query Frame = 0

Query:   28 CRVCRVVEYQFH---HYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDIS-LFRGACQACRFLACLNKGMDPSLVLTDEK 116
            C VC ++    H   HYGA  C  CRAFFRR +++ RK  P   C              CDI+   R  CQ CRF  CL  GM   +VLTD +
Sbjct:   47 CDVCTILIDTKHASIHYGALTCYSCRAFFRRSLQKTRK--PEFKCFKVGD---------CDITPKSRRKCQKCRFQKCLEVGMKIEMVLTDTQ 128

[Close]

BLAST of EMLSAG00000006454 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold59_size442576-processed-gene-0.17 (protein:Tk11668 transcript:snap_masked-scaffold59_size442576-processed-gene-0.17-mRNA-1 annotation:"nuclear receptor 1")

HSP 1 Score: 61.2326 bits (147), Expect = 9.667e-11
Identity = 33/94 (35.11%), Postives = 48/94 (51.06%), Query Frame = 0

Query:   28 CRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDI-SLFRGACQACRFLACLNKGMDPSLVLTDEKSLKK 120
            C++C+    +  HYGA  C  C+AFFRR    Q   N    C          ++  C++    R  C+ CR+  CL  GM PSLVLT+E+ +K+
Sbjct:   41 CQICKDPSIKHLHYGAITCFSCKAFFRRT--SQGNANEKFVC---------KNSGECNVLHKLRKKCRKCRYEKCLQVGMKPSLVLTEEEKVKR 123

[Close]

BLAST of EMLSAG00000006454 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold550_size154339-processed-gene-0.5 (protein:Tk11252 transcript:snap_masked-scaffold550_size154339-processed-gene-0.5-mRNA-1 annotation:"thyroid hormone receptor partial")

HSP 1 Score: 60.8474 bits (146), Expect = 1.328e-10
Identity = 52/168 (30.95%), Postives = 71/168 (42.26%), Query Frame = 0

Query:   18 GDDDVGEDLLCRVCRVVEYQFH-HYGAYACNRCRAFFRRMVRRQR------KGNPPTPC-ITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDE-------KSLKK--ENSVPIHSTNSKFYYDSPVVIAPWSKDIQASIVNEEEEETSIANLPPV 168
            GD D     +C +C      FH +YGA  C  CRAFFRR V+R        KG+   PC I  +                R  C+ CRF ACL  GM    V++ E       K  KK  ++ VP  +         P  + P  +    S+V+EE  E S+ +LP +
Sbjct:    3 GDSDPKRSTICGICGAQTGNFHLNYGASTCLSCRAFFRRTVQRDESPKFLCKGDGKNPCEINERN---------------RKKCKRCRFQACLTAGMKTDQVMSSEVKQTWFRKMYKKKAKDQVPPETPE-------PRSVNP-RRAKYVSMVSEEPSECSLMSLPMI 147

[Close]

BLAST of EMLSAG00000006454 vs. Tigriopus kingsejongenis genes
Match: maker-scaffold285_size222332-snap-gene-0.10 (protein:Tk07152 transcript:maker-scaffold285_size222332-snap-gene-0.10-mRNA-1 annotation:"hypothetical protein HELRODRAFT_138305 partial")

HSP 1 Score: 60.077 bits (144), Expect = 2.530e-10
Identity = 37/106 (34.91%), Postives = 47/106 (44.34%), Query Frame = 0

Query:   28 CRVCRVVEYQFH-HYGAYACNRCRAFFRRMVRRQRKG---NPPTPCITTKGVPPITDAPICDISLFRGACQACRFLACLNKGMDPSLVLTDE------KSLKKENS 123
            CRVCR      H +YGA +C  CRAFFRR  + + K         C  +KG               R  C+ CR+  CL  GMD  LV+ D       K + +ENS
Sbjct:  146 CRVCRSTGGTNHLNYGAVSCLSCRAFFRRATKNRNKVFKCKKQGSCFMSKGT--------------RSNCKPCRYDTCLRVGMDQGLVIADRVASQSSKQIARENS 237

[Close]

BLAST of EMLSAG00000006454 vs. Tigriopus kingsejongenis genes
Match: snap_masked-scaffold2498_size15023-processed-gene-0.1 (protein:Tk12056 transcript:snap_masked-scaffold2498_size15023-processed-gene-0.1-mRNA-1 annotation:"vitamin d3 receptor b-like")

HSP 1 Score: 59.3066 bits (142), Expect = 4.233e-10
Identity = 36/87 (41.38%), Postives = 40/87 (45.98%), Query Frame = 0

Query:   28 CRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLF-RGACQACRFLACLNKGMDPSLVLT 113
            C+VC  V     HYGA AC  CRAFFRR V      N P  C   K          C I+   R  CQ CRF  C+  GM  S V+T
Sbjct:   74 CKVCSDVANDHIHYGAIACYSCRAFFRRGV----NANAPYYCSQNKS---------CSITKHTRKHCQYCRFQKCMAIGMRASWVMT 147

The following BLAST results are available for this feature:

BLAST of EMLSAG00000006454 vs. GO
BLAST of EMLSAG00000006454 vs. C. finmarchicus
BLAST of EMLSAG00000006454 vs. L. salmonis peptides
BLAST of EMLSAG00000006454 vs. SwissProt
BLAST of EMLSAG00000006454 vs. Select Arthropod Genomes
BLAST of EMLSAG00000006454 vs. nr
BLAST of EMLSAG00000006454 vs. Tigriopus kingsejongenis genes

BLAST of EMLSAG00000006454 vs. GO
Analysis Date: 2014-04-02 (Blast vs. GO)
Total hits: 25


Match Name	E-value	Identity	Description
-	8.753e-10	27.31	symbol:LOC100365683 "Protein LOC100365683" species...	[more]
-	8.753e-10	27.31	symbol:LOC100365683 "nuclear receptor subfamily 2,...	[more]
-	1.779e-9	26.75	symbol:Nr2e3 "nuclear receptor subfamily 2, group ...	[more]
-	6.816e-9	28.57	symbol:nhr-136 "Nuclear hormone receptor family me...	[more]
-	8.373e-9	39.53	symbol:nr2e3 "nuclear receptor subfamily 2, group ...	[more]
-	8.642e-9	40.70	symbol:NR2E3 "Photoreceptor-specific nuclear recep...	[more]
-	8.963e-9	40.70	symbol:NR2E3 "Photoreceptor-specific nuclear recep...	[more]
-	9.197e-9	33.33	symbol:NR2E3 "Photoreceptor-specific nuclear recep...	[more]
-	1.239e-8	34.00	symbol:NR1I2 "Nuclear receptor subfamily 1, group ...	[more]
-	1.277e-8	34.00	symbol:NR1I2 "Nuclear receptor subfamily 1 group I...	[more]

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BLAST of EMLSAG00000006454 vs. C. finmarchicus
Analysis Date: 2014-05-09 (TblastN vs C. finmarchicus TSA)
Total hits: 25


Match Name	E-value	Identity	Description
gi\|592861817\|gb\|GAXK01095745.1\|	5.438e-7	37.19	TSA: Calanus finmarchicus comp201640_c1_seq1 trans...	[more]
gi\|592861822\|gb\|GAXK01095740.1\|	5.438e-7	37.19	TSA: Calanus finmarchicus comp201640_c0_seq1 trans...	[more]
gi\|592857755\|gb\|GAXK01099807.1\|	9.390e-5	35.00	TSA: Calanus finmarchicus comp253537_c2_seq15 tran...	[more]
gi\|592755910\|gb\|GAXK01198503.1\|	9.397e-5	52.63	TSA: Calanus finmarchicus comp507525_c2_seq3 trans...	[more]
gi\|592755912\|gb\|GAXK01198501.1\|	9.566e-5	52.63	TSA: Calanus finmarchicus comp507525_c2_seq1 trans...	[more]
gi\|592755909\|gb\|GAXK01198504.1\|	9.792e-5	52.63	TSA: Calanus finmarchicus comp507525_c2_seq4 trans...	[more]
gi\|592755911\|gb\|GAXK01198502.1\|	9.971e-5	52.63	TSA: Calanus finmarchicus comp507525_c2_seq2 trans...	[more]
gi\|592818252\|gb\|GAXK01136316.1\|	1.115e-4	52.63	TSA: Calanus finmarchicus comp619954_c2_seq4 trans...	[more]
gi\|592818253\|gb\|GAXK01136315.1\|	1.123e-4	52.63	TSA: Calanus finmarchicus comp619954_c2_seq3 trans...	[more]
gi\|592818254\|gb\|GAXK01136314.1\|	1.295e-4	52.63	TSA: Calanus finmarchicus comp619954_c2_seq2 trans...	[more]

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BLAST of EMLSAG00000006454 vs. L. salmonis peptides
Analysis Date: 2014-05-10 (Blastp vs. self)
Total hits: 7


Match Name	E-value	Identity	Description
EMLSAP00000006454	0.000e+0	100.00	pep:novel supercontig:LSalAtl2s:LSalAtl2s3535:4892...	[more]
EMLSAP00000004174	9.214e-12	37.25	pep:novel supercontig:LSalAtl2s:LSalAtl2s220:36973...	[more]
EMLSAP00000010267	1.574e-9	29.13	pep:novel supercontig:LSalAtl2s:LSalAtl2s680:11040...	[more]
EMLSAP00000011907	3.012e-9	31.73	pep:novel supercontig:LSalAtl2s:LSalAtl2s83:639505...	[more]
EMLSAP00000012651	7.648e-9	36.96	pep:novel supercontig:LSalAtl2s:LSalAtl2s959:3535:...	[more]
EMLSAP00000008261	1.845e-7	34.48	pep:novel supercontig:LSalAtl2s:LSalAtl2s49:858199...	[more]
EMLSAP00000009969	4.518e-7	30.91	pep:novel supercontig:LSalAtl2s:LSalAtl2s651:30270...	[more]

BLAST of EMLSAG00000006454 vs. SwissProt
Analysis Date: 2017-02-10 (Blastp vs. SwissProt)
Total hits: 7


Match Name	E-value	Identity	Description
gi\|10720145\|sp\|Q9QXZ7.1\|NR2E3_MOUSE	1.267e-9	26.75	RecName: Full=Photoreceptor-specific nuclear recep...	[more]
gi\|109937698\|sp\|O01930.2\|NH136_CAEEL	4.936e-9	28.57	RecName: Full=Nuclear hormone receptor family memb...	[more]
gi\|263506139\|sp\|Q9TTF0.2\|NR2E3_BOVIN	6.212e-9	40.70	RecName: Full=Photoreceptor-specific nuclear recep...	[more]
gi\|8928275\|sp\|Q9Y5X4.1\|NR2E3_HUMAN	6.609e-9	33.33	RecName: Full=Photoreceptor-specific nuclear recep...	[more]
gi\|6093860\|sp\|O75469.1\|NR1I2_HUMAN	9.242e-9	34.00	RecName: Full=Nuclear receptor subfamily 1 group I...	[more]
gi\|75065697\|sp\|Q8SQ01.1\|NR1I2_MACMU	5.249e-8	33.33	RecName: Full=Nuclear receptor subfamily 1 group I...	[more]
gi\|10720385\|sp\|Q20765.2\|NHR7_CAEEL	4.996e-7	35.35	RecName: Full=Nuclear hormone receptor family memb...	[more]

BLAST of EMLSAG00000006454 vs. Select Arthropod Genomes
Analysis Date: 2017-02-20 (Blastp vs. Selected Arthropods)
Total hits: 3


Match Name	E-value	Identity	Description
gb\|EEC00893.1\|	2.565e-7	35.16	retinoid X receptor, putative, partial [Ixodes sca...	[more]
EAA12047.4	3.403e-7	36.14	AGAP000819-PA [Anopheles gambiae str. PEST]	[more]
gb\|KFM66780.1\|	4.406e-7	34.15	Vitamin D3 receptor B, partial [Stegodyphus mimosa...	[more]

BLAST of EMLSAG00000006454 vs. nr
Analysis Date: 2017-02-20 (Blastp vs. NR (2/2017))
Total hits: 25


Match Name	E-value	Identity	Description
gi\|532051570\|ref\|XP_005368541.1\|	2.068e-8	27.63	PREDICTED: photoreceptor-specific nuclear receptor...	[more]
gi\|344248427\|gb\|EGW04531.1\|	2.419e-8	27.63	Photoreceptor-specific nuclear receptor [Cricetulu...	[more]
gi\|354473494\|ref\|XP_003498970.1\|	2.784e-8	27.63	PREDICTED: photoreceptor-specific nuclear receptor...	[more]
gi\|281353714\|gb\|EFB29298.1\|	2.931e-8	36.94	hypothetical protein PANDA_011329, partial [Ailuro...	[more]
gi\|589916417\|ref\|XP_006971529.1\|	6.575e-8	27.19	PREDICTED: photoreceptor-specific nuclear receptor...	[more]
gi\|1079711622\|ref\|XP_018535680.1\|	1.293e-7	37.11	PREDICTED: photoreceptor-specific nuclear receptor...	[more]
gi\|149041874\|gb\|EDL95715.1\|	1.311e-7	26.61	rCG58152 [Rattus norvegicus]	[more]
gi\|560911655\|ref\|XP_006182118.1\|	1.501e-7	38.46	PREDICTED: photoreceptor-specific nuclear receptor...	[more]
gi\|672062391\|ref\|XP_008764597.1\|	1.709e-7	27.31	PREDICTED: LOW QUALITY PROTEIN: photoreceptor-spec...	[more]
gi\|293349263\|ref\|XP_002727107.1\|	1.908e-7	27.31	PREDICTED: photoreceptor-specific nuclear receptor...	[more]

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BLAST of EMLSAG00000006454 vs. Tigriopus kingsejongenis genes
Analysis Date: 2018-04-18 (Blastp vs. Tigriopus kingsejongensis proteins)
Total hits: 25


Match Name	E-value	Identity	Description
snap_masked-scaffold59_size442576-processed-gene-0.4	1.488e-11	40.00	protein:Tk11663 transcript:snap_masked-scaffold59_...	[more]
maker-scaffold42_size484952-snap-gene-3.25	2.284e-11	36.73	protein:Tk06368 transcript:maker-scaffold42_size48...	[more]
maker-scaffold267_size230776-snap-gene-1.25	4.912e-11	38.38	protein:Tk02974 transcript:maker-scaffold267_size2...	[more]
snap_masked-scaffold89_size390429-processed-gene-2.6	4.995e-11	38.79	protein:Tk12451 transcript:snap_masked-scaffold89_...	[more]
snap_masked-scaffold14_size734282-processed-gene-6.3	6.199e-11	32.04	protein:Tk11309 transcript:snap_masked-scaffold14_...	[more]
snap_masked-scaffold464_size163657-processed-gene-0.15	7.606e-11	39.78	protein:Tk05278 transcript:snap_masked-scaffold464...	[more]
snap_masked-scaffold59_size442576-processed-gene-0.17	9.667e-11	35.11	protein:Tk11668 transcript:snap_masked-scaffold59_...	[more]
snap_masked-scaffold550_size154339-processed-gene-0.5	1.328e-10	30.95	protein:Tk11252 transcript:snap_masked-scaffold550...	[more]
maker-scaffold285_size222332-snap-gene-0.10	2.530e-10	34.91	protein:Tk07152 transcript:maker-scaffold285_size2...	[more]
snap_masked-scaffold2498_size15023-processed-gene-0.1	4.233e-10	41.38	protein:Tk12056 transcript:snap_masked-scaffold249...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
LSalAtl2s3535	supercontig	LSalAtl2s3535:4892..6220 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
ensembl	2013-09-26 .965016
Blast vs. GO	2014-04-02
TblastN vs C. finmarchicus TSA	2014-05-09
Blastp vs. self	2014-05-10
Blastp vs. SwissProt	2017-02-10
Blastp vs. Selected Arthropods	2017-02-20
Blastp vs. NR (2/2017)	2017-02-20
Blastp vs. Tigriopus kingsejongensis proteins	2018-04-18

Properties


Property Name	Value
Logic name	ensemblgenomes
Description	maker-LSalAtl2s3535-snap-gene-0.8
Biotype	protein_coding
Evidence	IEA
Note	Photoreceptor-specific nuclear receptor

Cross References

External references for this gene


Database	Accession
Ensembl Metazoa (gene)	EMLSAG00000006454 (primary cross-reference)

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
EMLSAT00000006454	EMLSAT00000006454-702301	Lepeophtheirus salmonis	mRNA

Sequences

The following sequences are available for this feature:

gene from alignment at LSalAtl2s3535:4892..6220-

gene from alignment at LSalAtl2s3535:4892..6220-

Legend: mRNA

Hold the cursor over a type above to highlight its positions in the sequence below.

>EMLSAG00000006454-689220 ID=EMLSAG00000006454-689220|Name=EMLSAG00000006454|organism=Lepeophtheirus salmonis|type=gene|length=1329bp|location=Sequence derived from alignment at LSalAtl2s3535:4892..6220- (Lepeophtheirus salmonis)
ATGGGTCCTTCATCTTCCATCAAGGTTGGAAAACGGTGTACTTCAAAGAT
TGGAGATGACGACGTTGGGGAGGATTTATTATGCCGTGTCTGCCGCGTGG
TGGAGTATCAGTTTCATCATTATGGGGCTTATGCTTGCAACCGATGTCGA
GCCTTTTTTCGTCGAATGGTCCGAAGACAGAGGAAGGGGAATCCTCCCAC
ACCCTGTATAACAACAAAAGGAGTACCTCCTATAACTGATGCTCCTATTT
GTGATATTTCTCTCTTTAGAGGAGCCTGTCAGGCATGCAGATTTTTGGCG
TGCCTCAATAAGGGAATGGATCCCTCTCTCGTTCTAACGGACGAGGTACG
AMCCTCCCRATATTCTAGATCCAATCAAGCCACCAAGAAAATAAACATAC
CTAGAAAAAAACAATCCATCAAATCTAAAAAGAAATCTCTGAAAAAAGAG
AACTCCGTTCCTATTCAGTAGGATGATAACATACTTCTTCATTCTGTCCT
TCTCCTTCCATCATCTCCTGTTCCATTCATGCTTATTCATGACATTTCTA
ACTTGTTCATTTAATTACATACTCATTTCTATATGTAAGCAAAGGATTTT
TTCCGGGTGGGAAGACTAACTTGATATTAATTAATGACTACCTTTATACT
TACATTCTTGATAACAGTGATGGGAGGGCAGGGTGGAATGATTCCTTCCA
TTCNATTATTTATGAGTTCCACAAATTCCAAATTTTACTATGATTCACCT
GTTGTCATAGCGCCGTGGTCAAAAGATATCCAAGCATCCATTGTTAACGA
AGAAGAAGAAGAGACGTCTATCGCAAACTTACCTCCAGTTGAAATGGTCT
TCGTTGATGAAGAAGAGGAGGAAGAGGATCCACTTGTAGTGGATGRTGCA
GATCCAATCATTGGTGGRGKTGGAGATATGATAATGAAAGGKACCTTCTT
GTTCTCTTCACTTTTTTTTTAAATAAGCTAAAAATGACTTCCTTTTAAAT
ACTTAGATCATGTAGATCGGTCATTGAAAGAAACTGCTCTTGACGTCGTT
AGTTGGGAGGATCAGAGAAGTATATTGACTTCAGGTCCGGATCAGTTCAG
TCTTGAAGAGCTGTATAAATTTGTAGAGGAGCATCCACAGCAAGAATATG
AACAAGAAATAAAACCGCTTAGATTTGATGAATATGATAAAGGTCTTCAG
ACTCCATCCTTCGAGGGTCTCAATACACCTAGTTATGACCACCAATTAGA
GAATACCGTGCTCAATTTTAGTTTTTCTGTCCCAGAAATGGAAAGCTCAT
CATTACTCGACGATATGCTAGACAATTAG

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