vitamin d3 receptor b-like, snap_masked-scaffold2498_size15023-processed-gene-0.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Match: EMLSAG00000012965 (supercontig:LSalAtl2s:LSalAtl2s98:1224628:1226761:1 gene:EMLSAG00000012965 transcript:EMLSAT00000012965 description:"snap_masked-LSalAtl2s98-processed-gene-12.8") HSP 1 Score: 206.453 bits (524), Expect = 4.901e-59 Identity = 101/243 (41.56%), Postives = 148/243 (60.91%), Query Frame = 0 Query: 336 FTSEEVFLVDNIMNTEIATTRSIPVNPEVLMVMIDAAKKGTAIPYPALVEGYTICMRRIIQFVSKLDFFQSFSLPDQRSLLLHNTDMIVNIRSARLLRPGINLQAQVNHATGGPSLEPACASMDLFKCQERLEYKQIFQSPWACDPHHEAQFASLMENLFHLEMDVTTTTLMSMIVLFSTSYTDLKDSARAVQNQEFFSQLLYRYLGSMIGRKNATQLLPKYMHMISQLEEMSQIMMTKRLTL 578 F+ E L+ NIM +E +++ IP+ E + MI+ + P +EGY +CMRRIIQ S LDFF FS+ DQ++LLL NTDMIVNIR+AR + G++ + + +P MD F QIFQSPWAC E ++ LM+ +F L++D +T L+SM+ LFS++ + D RA + QEFF+ L+ +Y+ +G+ A QLLPKY+ MI+ LEEM+Q+M+ KRL + Sbjct: 389 FSDYECNLISNIMISEEESSKLIPLRSETMAXMINCSYSNKTFPQDVCLEGYLVCMRRIIQLSSMLDFFTCFSMEDQKALLLTNTDMIVNIRTARFFQHGVHFKKHIFFVNNTDD-DPKYGRMDTF---------QIFQSPWACSDEDEKKYNDLMKKIFDLQLDEISTVLISMMSLFSSTNAKIHDELRANKTQEFFTNLMKKYIIHHVGKDAACQLLPKYIFMIAHLEEMAQVMVXKRLNI 621 HSP 2 Score: 70.0922 bits (170), Expect = 7.144e-13 Identity = 25/34 (73.53%), Postives = 32/34 (94.12%), Query Frame = 0 Query: 114 NKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMT 147 NK+C +TKHTRKHCQYCRF KC+++GM++SWVMT Sbjct: 27 NKNCVVTKHTRKHCQYCRFVKCLSVGMKSSWVMT 60
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Match: EMLSAG00000008261 (supercontig:LSalAtl2s:LSalAtl2s49:858199:860758:1 gene:EMLSAG00000008261 transcript:EMLSAT00000008261 description:"maker-LSalAtl2s49-augustus-gene-8.3") HSP 1 Score: 166.007 bits (419), Expect = 2.343e-45 Identity = 84/244 (34.43%), Postives = 143/244 (58.61%), Query Frame = 0 Query: 334 LPFTSEEVFLVDNIMNTEIATTRSIPVNPEVLMVMIDAAKKGTAIPYPALVEGYTICMRRIIQFVSKLDFFQSFSLPDQRSLLLHNTDMIVNIRSARLLRPGINLQAQVNHATGGPSLEPACASMDLFKCQERLEYKQIFQSPWACDPHHEAQFASLMENLFHLEMDVTTTTLMSMIVLFSTSY-TDLKDSARAVQNQEFFSQLLYRYLGSMIGRKNATQLLPKYMHMISQLEEMSQIMMTKRL 576 + F E+ LV ++ EI + + IP+N + ++ ++ IP+ + GY C++RI F++K++FF + S DQ+ LLL+N DM+VNI++AR L P N+ Q G + E +C + + Y++IF++PW + Q+ +LM+ +F LEMD T L+ + +FST+ DL + ++ Q+ FS LLY+YL S IG + L PKY+++++QLEEM++ ++ KRL Sbjct: 233 MSFNKMEIHLVQEMLYWEIESRKKIPLNSVNMKSFMEYSQLNEPIPFEISLSGYNTCVQRITMFMTKINFFAALSPEDQKKLLLNNVDMVVNIKTARYLHPNNNITEQFEIINGKNNSEKSCTTSP--ATSNNVYYQEIFKNPWCSSFEDKTQYKALMKAIFDLEMDEITIILLIGLTIFSTTNCVDLDNINLIMRFQDVFSHLLYKYLCSTIGNSSTFLLFPKYINILAQLEEMAKTILNKRL 474 HSP 2 Score: 146.747 bits (369), Expect = 1.980e-38 Identity = 92/235 (39.15%), Postives = 133/235 (56.60%), Query Frame = 0 Query: 63 RKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKR------------VTKDSGS--------QSESAMGSEMEHSRPGEHSLFGAMHFLAESHSEH-----HPHSNPLLAGGHEDSSSHSYSHEEIPHT-----YGMTARHSVSSPTPSSSTYSDYTPLSQPSPFDCSTS 267 +KR KFIRKV C +CSD ANDHIHYGAIAC SCRAFFRR V NA Y+CS++K+C ITK TRKHCQ+CRF KC+ GM+ +WVM+E +KREKKEK R+K+ V K S + Q+ S M + + S+F + L E+ H ++ ++ + S S++ EI + + +R + + + ++ +Y+ L++P PF+ S S Sbjct: 52 KKRAKFIRKVTCHICSDTANDHIHYGAIACXSCRAFFRRAVICNAEYHCSRDKTCFITKETRKHCQFCRFNKCLEAGMKNTWVMSESEKREKKEKIRLKKLKAQQLLDPENGVKKSSFTPEWDKMLFQNNSNMHNMGNSTYDMSFSIFSKKNTLNTFSEEYRNCYGHYRTSHIIQDCFD--SGMSFNKMEIHLVQEMLYWEIESRKKIPLNSVNMKSFMEYSQLNEPIPFEISLS 284
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Match: EMLSAG00000012651 (supercontig:LSalAtl2s:LSalAtl2s959:3535:5114:-1 gene:EMLSAG00000012651 transcript:EMLSAT00000012651 description:"maker-LSalAtl2s959-snap-gene-0.24") HSP 1 Score: 124.79 bits (312), Expect = 8.060e-31 Identity = 56/105 (53.33%), Postives = 74/105 (70.48%), Query Frame = 0 Query: 62 KRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRVTKD 166 KR++PK V C VC D A DHIHYG IAC+SCRAFFRR V + Y+CS +++C IT TRK+CQ+CR++KC+ GM+ SWV++EE EK + IK V K+ Sbjct: 80 KRRKPKMTEMV-CNVCGDKAPDHIHYGGIACFSCRAFFRRSVPKHTTYFCSTDQACMITITTRKNCQFCRYKKCLESGMKPSWVLSEE---EKSSRNLIKYVRKN 180 HSP 2 Score: 67.0106 bits (162), Expect = 5.332e-12 Identity = 58/245 (23.67%), Postives = 118/245 (48.16%), Query Frame = 0 Query: 334 LPFTSEEVFLVDNIMNTEIATTRSIPVNPEVLMVMIDAAKKGTAIPYPA--LVEGYTICMRRIIQFVSKLDFFQSFSLPDQRSLLLHNTDMIVNIRSARLL-RPGI-NLQAQVNHATGGP---SLEPACASMDLFKCQERLEYKQIFQSPWACDPHHEAQFASLMENLFHLEMDVTTTTLMSMIVLFSTSYTDLKDSARAVQNQEFFSQLLYRYLGSMIGRKNATQLLPKYMHMISQLEEMSQIM 571 L FT+EE +DN++ + +T IP+ PE++M I +++ + + E Y + R+ +F + +D F+ + D++ LL N D + +R+ + G NL +Q+ + TG P ++ P S++ ++F+ PWA H F + L + L+ ++ LFS +++ + Q QE + L YRYL S + ++ ++ ++ ++S+L +S ++ Sbjct: 243 LCFTTEEXRHIDNLIFAQDSTRNLIPM-PELVMDEILEMTNISSLNMTSKGITEIYRVIYSRVAKFATYIDHFEELTSDDKKLLLSKNMDSMAILRTVVCFNKDGTGNLTSQLKN-TGSPIYGNVGPYYISVE-----------RVFRHPWAKSEEHRHLFKETFRKIASLGLGEKAAMLLQLVTLFSVLDLPVQERNKIEQFQEQMALLCYRYLKSQKIKFSSNDMIKVFV-LLSELRYLSNLL 473
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Match: EMLSAG00000010267 (supercontig:LSalAtl2s:LSalAtl2s680:110406:112508:1 gene:EMLSAG00000010267 transcript:EMLSAT00000010267 description:"maker-LSalAtl2s680-augustus-gene-1.19") HSP 1 Score: 102.064 bits (253), Expect = 2.500e-23 Identity = 44/85 (51.76%), Postives = 55/85 (64.71%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAP---YYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKK 155 C++C +VA H++YG C SCRAFFRR V N+ CSQ K C I TRK CQ CRFQKC++ GMR SWV + ++R KK Sbjct: 107 CQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFICCSQTKDCIINLKTRKACQLCRFQKCVSAGMRVSWVFPDRERRSKK 191
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Match: EMLSAG00000011907 (supercontig:LSalAtl2s:LSalAtl2s83:639505:641027:-1 gene:EMLSAG00000011907 transcript:EMLSAT00000011907 description:"maker-LSalAtl2s83-augustus-gene-6.22") HSP 1 Score: 100.523 bits (249), Expect = 8.719e-23 Identity = 43/85 (50.59%), Postives = 57/85 (67.06%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYY---CSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKK 155 C++C +VA H++YG C SCRAFFRR V N+ CS+ + C I TRK CQ CRFQKC++ GMRASWV+ + ++R KK Sbjct: 106 CQICGEVAGKHVYYGGQCCTSCRAFFRRSVQNNSYKQFSCCSKTEDCIINLQTRKSCQLCRFQKCISAGMRASWVLPDGERRSKK 190
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Match: EMLSAG00000004174 (supercontig:LSalAtl2s:LSalAtl2s220:369739:371271:-1 gene:EMLSAG00000004174 transcript:EMLSAT00000004174 description:"augustus_masked-LSalAtl2s220-processed-gene-3.5") HSP 1 Score: 91.6633 bits (226), Expect = 7.042e-20 Identity = 43/99 (43.43%), Postives = 64/99 (64.65%), Query Frame = 0 Query: 60 KPKRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAP--YYC-----SQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDK 151 K +++RP+ + V C++C D+A H HYGAIAC+SCRAFF R V+ + C ++ C ITK TR HCQ+CR++ C++ GM S+V T E++ Sbjct: 124 KKRKRRPEPMTDV-CRICGDIAPPHNHYGAIACFSCRAFFGRTVHKGTQERFRCVRGNPDESGQCMITKATRTHCQFCRYRGCLSAGMXPSYVTTAEER 221
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Match: EMLSAG00000007361 (supercontig:LSalAtl2s:LSalAtl2s418:374353:376789:1 gene:EMLSAG00000007361 transcript:EMLSAT00000007361 description:"maker-LSalAtl2s418-augustus-gene-3.13") HSP 1 Score: 88.9669 bits (219), Expect = 5.931e-19 Identity = 43/120 (35.83%), Postives = 62/120 (51.67%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRVTKDSGSQSESAMGSEMEHSRPGEHSLFGAM 193 C VC D A HYGA +C C+ FFRR V Y C QN++C + K R +C+YCR + C+ GM+ S V E D+ R K KD S +E + + + + G+ SL ++ Sbjct: 151 CAVCGDRATGK-HYGAASCDGCKGFFRRSVRKERVYGCRQNRACIVNKDKRNNCRYCRLKMCIKAGMKKSAVQNERDRI----SCRKKTSAKDMNSANELTVTALLNADKVGQKSLLNSI 265
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Match: EMLSAG00000012486 (supercontig:LSalAtl2s:LSalAtl2s91:348479:353390:-1 gene:EMLSAG00000012486 transcript:EMLSAT00000012486 description:"maker-LSalAtl2s91-snap-gene-4.8") HSP 1 Score: 88.9669 bits (219), Expect = 1.027e-18 Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMR 141 C VC D A+ HYGAI+C C+ FF+R + Y C NK C +TKH R CQYCR QKC+A+GMR Sbjct: 220 CVVCGDRASGR-HYGAISCEGCKGFFKRSIRKQLGYQCRGNKDCEVTKHHRNRCQYCRLQKCLAMGMR 286
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Match: EMLSAG00000000733 (supercontig:LSalAtl2s:LSalAtl2s1117:84476:96586:1 gene:EMLSAG00000000733 transcript:EMLSAT00000000733 description:"maker-LSalAtl2s1117-snap-gene-1.23") HSP 1 Score: 83.1889 bits (204), Expect = 6.735e-17 Identity = 36/94 (38.30%), Postives = 52/94 (55.32%), Query Frame = 0 Query: 47 RGGHSICGKASQGKPKRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGM 140 R G+S CG + I + CKVC D ++ +HYG I C C+ FFRR ++ Y C + K+C + + R CQ+CR QKC+A+GM Sbjct: 22 RSGNSACGGSDSNNSVHNAQ--IEIIPCKVCGDKSSG-VHYGVITCEGCKGFFRRSQSSVVNYQCPRQKNCIVDRVNRNRCQFCRLQKCLALGM 112
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Match: EMLSAG00000005090 (supercontig:LSalAtl2s:LSalAtl2s269:306853:308464:-1 gene:EMLSAG00000005090 transcript:EMLSAT00000005090 description:"augustus_masked-LSalAtl2s269-processed-gene-3.0") HSP 1 Score: 82.4185 bits (202), Expect = 8.178e-17 Identity = 36/83 (43.37%), Postives = 49/83 (59.04%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKE 156 C VC D A+ + HY A+AC C+ FFRR + N+ Y C N C I + R+ CQ CR +KC A GMRA V+ E +K++ Sbjct: 173 CLVCGDRASGY-HYNALACEGCKGFFRRSITKNSNYTCKWNGDCEIDMYMRRKCQACRLKKCYATGMRAECVVPERTCIQKRQ 254
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|2500907|sp|Q24143.1|HR96_DROME (RecName: Full=Nuclear hormone receptor HR96; Short=dHR96; AltName: Full=Nuclear receptor subfamily 1 group J member 1) HSP 1 Score: 97.0561 bits (240), Expect = 7.713e-20 Identity = 50/133 (37.59%), Postives = 75/133 (56.39%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEED---KREKKEKARIKRVTKDSGSQS-ESAMGSEMEHSRPGEHSLFGAMHFLAESHSE 202 C VC D A + ++ A+ C SC+AFFRR A + C N++C IT TR+ CQ CR +KC+ IGM++ +M+EED KR K E R KR ++G+ + ++ G E +H P + S H+ S+ Sbjct: 7 CAVCGDKALGY-NFNAVTCESCKAFFRRNALAKKQFTCPFNQNCDITVVTRRFCQKCRLRKCLDIGMKSENIMSEEDKLIKRRKIETNRAKRRLMENGTDACDADGGEERDHKAPADSSSSNLDHYSGSQDSQ 138
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|45645185|sp|Q17771.3|NHR35_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-35) HSP 1 Score: 96.2857 bits (238), Expect = 7.903e-20 Identity = 45/89 (50.56%), Postives = 54/89 (60.67%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEED---KREKKEKAR 159 C +CSDVA HYGAIAC C+ FFRR V N Y+C C I KH R C+YCRF KC++ GMR V +E D KREKK+ + Sbjct: 77 CHICSDVATGR-HYGAIACNGCKGFFRRTVRRNYEYHCRFESKCEIDKHNRAVCRYCRFMKCISSGMRDDQVQSERDVIGKREKKDNMK 164
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|44888978|sp|O02151.3|NHR14_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-14) HSP 1 Score: 92.8189 bits (229), Expect = 7.013e-19 Identity = 54/135 (40.00%), Postives = 68/135 (50.37%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEED-----KREKKEKARIKRVTKDSGSQSES--AMGSEMEHSRPGEHSLFGAMHFLAESHS 201 C VC D A HYGA+AC C+ FFRR V N Y C NK C+I K R C+YCRFQKC+A GM+ + E D KR K+ A + + G+ S MG+ + SR L H LA + S Sbjct: 20 CVVCGDKAIGK-HYGAVACNGCKGFFRRSVWQNLQYTCRFNKQCNIDKDHRNACRYCRFQKCLADGMKPEAIQNERDRIGSTKRRKRSGANSENNSDSEGTPSPKIEVMGNSV--SRKLIEMLLDIEHRLASNQS 151
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|52783388|sp|Q7SYN5.1|RXRBA_DANRE (RecName: Full=Retinoic acid receptor RXR-beta-A; AltName: Full=Nuclear receptor subfamily 2 group B member 2-A; AltName: Full=Retinoid X receptor beta-A) HSP 1 Score: 92.0485 bits (227), Expect = 1.488e-18 Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 0 Query: 66 PKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRVTKDSGSQSESAMGSEM 179 P +K C +C D ++ HYG +C C+ FF+R V + Y C NK C + K R CQYCR+QKC+A+GM+ V E + ++E+ R K +D +S SA EM Sbjct: 117 PMVSQKRLCAICGDRSSGK-HYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEERQRNKE--RDGEVESSSAANEEM 227
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|114152848|sp|Q94407.3|NHR48_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-48) HSP 1 Score: 92.0485 bits (227), Expect = 3.042e-18 Identity = 56/179 (31.28%), Postives = 88/179 (49.16%), Query Frame = 0 Query: 56 ASQGKPKRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKA--RIKRVTKDSGSQS--ESAMGSEMEHS---RPGEHSLFGAMHFLAESHSEHHPHSNPLLAGGHEDSSSHSYSHEE 227 +S G +++ + KV C+VC D A + ++ I C SC+AFFRR N C N+ C I +R+ CQ CR KC A+GM+ W+M+EE + EKK++ +R +D+ +++ E+ M E E+S P +LA + H GH H Y+ +E Sbjct: 83 SSSGGNEKESKRTANKV-CRVCGDKAFSY-NFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFAVGMKKEWIMSEEARLEKKQRVEENRERRLQDAMNRALEEACMEDESENSYDEAPAPSHQMSVRQYLANDDAPHKSSDEVQPHLGH-----HGYNQKE 254
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|68566021|sp|Q26622.1|SHR2_STRPU (RecName: Full=Orphan steroid hormone receptor 2; AltName: Full=SpSHR2) HSP 1 Score: 91.6633 bits (226), Expect = 3.598e-18 Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = 0 Query: 59 GKPKRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEK 157 KP P+ I C VC D A+ HYGAI+C C+ FF+R + + Y C NK C I KH R CQYCR QKC+ +GM++ V E + ++K Sbjct: 74 AKPGMTSPRPIEL--CAVCGDKASGR-HYGAISCEGCKGFFKRSIRKHLGYTCRGNKDCQIIKHNRNRCQYCRLQKCLDMGMKSDSVQCERSPLKTRDK 169
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|1351190|sp|P49116.1|NR2C2_HUMAN (RecName: Full=Nuclear receptor subfamily 2 group C member 2; AltName: Full=Orphan nuclear receptor TAK1; AltName: Full=Orphan nuclear receptor TR4; AltName: Full=Testicular receptor 4) HSP 1 Score: 90.5077 bits (223), Expect = 7.147e-18 Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 0 Query: 59 GKPKRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTE----EDKREK 154 GK +RP+ + C VC D A+ HYGA++C C+ FF+R V N Y C N+ C I KH R CQ+CR +KC+ +GM+ V +E + +REK Sbjct: 104 GKTDVQRPQVVEY--CVVCGDKASGR-HYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDVQREK 200
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|190411624|sp|Q1L673.2|VDRB_DANRE (RecName: Full=Vitamin D3 receptor B; Short=VDR-B; AltName: Full=1,25-dihydroxyvitamin D3 receptor B; AltName: Full=Nuclear receptor subfamily 1 group I member 1-B) HSP 1 Score: 88.9669 bits (219), Expect = 1.223e-17 Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKE 156 C VC D A H+ A+ C C+ FFRR + A + C N SC+ITK R+HCQ CR ++C+ IGM +++T+E+ + KKE Sbjct: 23 CGVCGDKATG-FHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCLDIGMMKEFILTDEEVQRKKE 104
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|1706576|sp|P49883.1|ECR_MANSE (RecName: Full=Ecdysone receptor; AltName: Full=20-hydroxy-ecdysone receptor; Short=20E receptor; AltName: Full=EcRH; AltName: Full=Ecdysteroid receptor; AltName: Full=Nuclear receptor subfamily 1 group H member 1) HSP 1 Score: 88.9669 bits (219), Expect = 2.007e-17 Identity = 51/140 (36.43%), Postives = 78/140 (55.71%), Query Frame = 0 Query: 51 SICGKASQGKPKRKR--PKFIRKVE-CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTE---EDKREKKEKARIKRVTKDSGSQSESAMGSEMEHSRP 184 SI G ++ G+P+R++ P ++ E C VC D A+ + HY A+ C C+ FFRR V NA Y C +C + + R+ CQ CR +KC+A+GMR V+ E ++KR +KE R K S + + M + M+ P Sbjct: 121 SINGCSTDGEPRRQKKGPAPRQQEELCLVCGDRASGY-HYNALTCEGCKGFFRRSVTKNAVYICKFGHACEMDMYMRRKCQECRLKKCLAVGMRPECVVPESTCKNKRREKEAQREKDKLPVSTTTVDDHMPAIMQCDPP 259
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|133488|sp|P18514.1|RARA_NOTVI (RecName: Full=Retinoic acid receptor alpha; Short=RAR-alpha; AltName: Full=Nuclear receptor subfamily 1 group B member 1) HSP 1 Score: 88.1965 bits (217), Expect = 2.470e-17 Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKAR 159 C VC D ++ + HYG AC C+ FFRR + N Y C ++K+C I K TR CQYCR QKC +GM V + +K++K+E + Sbjct: 87 CFVCQDKSSGY-HYGVSACEGCKGFFRRSIQKNMVYTCHRDKTCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKQEAPK 171
BLAST of vitamin d3 receptor b-like vs. nr
Match: gi|1279716142|ref|XP_022902482.1| (nuclear hormone receptor HR96 [Onthophagus taurus]) HSP 1 Score: 97.8265 bits (242), Expect = 7.347e-18 Identity = 126/529 (23.82%), Postives = 216/529 (40.83%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRVTKDSGSQSESAMG---SEMEHSRPGEHSLFGAMHFLAESHSEHHPHSNPLLAGGHEDSSSHSYSHEEIPHTYGMTARHSVSSPTPSSSTYSDYTPLSQPSPFDCSTSSGGGTRSHVSGPFGLERCASGGGESPSGDLEGYQSSTEYISPPSPLEHKPDISFFVEGTHIKDQP---ILPFTSEEVFLVDN---IMNTEIATTRSI--PVNPEVLMVMIDAAK-KG---TAIPYPALVEGYT---ICMRRIIQFVSKLDFFQSFSLPDQRSLLLHNTDMIVNIRSARLLRPGI-------------NLQAQVNHATGGPSLEPACASMDLFKCQERLEYKQIFQSPWACDPHHEAQFASLMENLFHLEMDVTTTTLMSMIVLFSTSYTDL--KDSARAVQNQEFFSQLLYRYLGSMIGRKNATQLLPKYMHMISQLEEMSQ 569 C VC D A + ++ AI C SC+AFFRR AN C N+ C I TR+ CQ CR +KC IGMR ++M+E++K K++K + + K S + G + E S + + + +S + +N L++ DS++ + S+ M RH ++ PTP+SS +P SP + + ++ +V G +P LE QS P+E S E ++ + I + L D +N I +++ PV+ ++ ++ + + KG + PALV+ + +RR+I+ K++ F++ DQ +LL ++ +RS + +L+A V G + FK ER + Q F W D EN+ ++ I LF+ + +D + QN ++ LL RYL S A K + IS+L ++++ Sbjct: 12 CGVCGDKALGY-NFNAITCESCKAFFRRNALANKDLRCPFNQQCEINTVTRRFCQRCRLEKCFTIGMRKDYIMSEQEKVLKRQKIQENKAKKRSNPSNGFKQGFKKIKREGSTDDDSQEYDTTSDYGDIYSPND--TNNLISIDKIDSNTDNISNNTSIIDESMI-RHMLN-PTPNSS----LSPDESLSPVNNNETNCNNNSKNVQ---------KDDGRTPKDILEDVQSI--------PIEANSIESILCEAIKLEYEAYSSIAQYQGNSRELNDAERAKLNELIVANKALLTPVDDDISTLIAEECRFKGRPDAILANPALVDIINLTAVAIRRLIKMAKKINAFKNMCQEDQVALLKAGCTEMLMLRSLMIYDDTKQTWRIPHRKEYLSSLKADVLKEVKG----------NFFKEHER--FIQTFDPKWRSD-----------ENI---------VLILCAIALFTPDRPGVIHQDVIKLEQNSYYY--LLRRYLESTFPGCEAKSTFLKLIQKISELHKLNE 480
BLAST of vitamin d3 receptor b-like vs. nr
Match: gi|1238867475|ref|XP_013781143.2| (vitamin D3 receptor-like [Limulus polyphemus]) HSP 1 Score: 97.4413 bits (241), Expect = 7.542e-18 Identity = 51/122 (41.80%), Postives = 72/122 (59.02%), Query Frame = 0 Query: 54 GKASQGKPKRKRPKFIRKVE--CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANA--PYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRVTKDSGSQS 171 G +S P R + ++ + C VC D A + H+G I+C SC+AFFRR V ++C K C I +RK CQYCRFQKC++IGM WVMTEE+ R+ ++R++R + SQS Sbjct: 13 GSSSIRLPVEHRNRLFKRQQKACGVCGDRAKSY-HFGGISCDSCKAFFRRSVQNEGYRNFHCPYGKKCEINITSRKCCQYCRFQKCLSIGMEKGWVMTEEE-RQNLLRSRMERKQQQGISQS 132
BLAST of vitamin d3 receptor b-like vs. nr
Match: gi|926653773|ref|XP_013793497.1| (vitamin D3 receptor-like, partial [Limulus polyphemus]) HSP 1 Score: 93.5893 bits (231), Expect = 8.637e-18 Identity = 47/104 (45.19%), Postives = 65/104 (62.50%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANA--PYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEED----------KREKKEKARIKRVTK 165 CKVC D A + H+G ++C SC+AFFRR V + + C ++C IT +RK CQ+CRFQKC+AIGM WVMTEE+ KR+++E+ +I R K Sbjct: 28 CKVCGDRAKSY-HFGGLSCDSCKAFFRRSVQSAGYKNFQCPYRRTCEITISSRKCCQFCRFQKCVAIGMEKGWVMTEEERLHVLRIRMAKRQEEEEKKIHRRQK 130
BLAST of vitamin d3 receptor b-like vs. nr
Match: gi|1228009596|ref|XP_021936714.1| (nuclear hormone receptor HR96 isoform X1 [Zootermopsis nevadensis]) HSP 1 Score: 97.8265 bits (242), Expect = 1.173e-17 Identity = 45/100 (45.00%), Postives = 61/100 (61.00%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRVTKDSGSQSES 173 C VC D A + ++ A+ C SC+AFFRR N + C +SC IT TR+ CQ CR QKC+AIGMR ++M+EEDK K++K + R K S E+ Sbjct: 41 CGVCGDRALGY-NFNAVTCESCKAFFRRNALKNKEFRCPFTESCDITIVTRRFCQRCRLQKCLAIGMRKDYIMSEEDKVMKRQKIELNRAKKRPLSDREN 139
BLAST of vitamin d3 receptor b-like vs. nr
Match: gi|195504567|ref|XP_002099134.1| (uncharacterized protein Dyak_GE23543 [Drosophila yakuba] >gi|194185235|gb|EDW98846.1| uncharacterized protein Dyak_GE23543 [Drosophila yakuba]) HSP 1 Score: 98.2117 bits (243), Expect = 1.178e-17 Identity = 53/149 (35.57%), Postives = 80/149 (53.69%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEED---KREKKEKARIKRVTKDSGSQS-ESAMGSEMEHSRPGEHSLFGAMHFLAESHSEHHPHSNPLLAGGHEDS 218 C VC D A + ++ A+ C SC+AFFRR A + C N++C IT TR+ CQ CR +KC+ IGM++ +M+EED KR K E R KR ++G+ + ++ G E +H P + S H+ S+ ++ GG S Sbjct: 7 CAVCGDKALGY-NFNAVTCESCKAFFRRNALAKKQFTCPFNQNCDITVVTRRFCQKCRLRKCLDIGMKSENIMSEEDKLIKRRKIETNRAKRRLMENGTDACDADGGEETDHKAPADSSSSNLDHYSGSQDSQSCGSADSGANGGQASS 154 The following BLAST results are available for this feature:
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of vitamin d3 receptor b-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of vitamin d3 receptor b-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
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The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2498_size15023:13040..14776+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold2498_size15023-processed-gene-0.1 ID=snap_masked-scaffold2498_size15023-processed-gene-0.1|Name=vitamin d3 receptor b-like|organism=Tigriopus kingsejongensis|type=gene|length=1737bp|location=Sequence derived from alignment at scaffold2498_size15023:13040..14776+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'vitamin d3 receptor b-like' has the following synonyms
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