vitamin d3 receptor b-like, snap_masked-scaffold2498_size15023-processed-gene-0.1 (gene) Tigriopus kingsejongensis
Overview
Associated RNAi Experiments
Nothing found Homology
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Match: EMLSAG00000007894 (supercontig:LSalAtl2s:LSalAtl2s466:351370:353021:1 gene:EMLSAG00000007894 transcript:EMLSAT00000007894 description:"maker-LSalAtl2s466-augustus-gene-2.7") HSP 1 Score: 66.2402 bits (160), Expect = 8.429e-12 Identity = 31/96 (32.29%), Postives = 47/96 (48.96%), Query Frame = 0 Query: 59 GKPKRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNK--SCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKR 152 K ++ + + + CKVC+D ++ HYG AC C FF+R + N Y C SC + K R C+ CR ++C+ +GM V E R Sbjct: 19 AKSQQTSSRILYDIPCKVCTDHSSGK-HYGIFACDGCAGFFKRSIRRNRLYVCKAKSEGSCLVDKTHRNQCRACRLKRCVDVGMNKDAVQHERGPR 113
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Match: EMLSAG00000006454 (supercontig:LSalAtl2s:LSalAtl2s3535:4892:6220:-1 gene:EMLSAG00000006454 transcript:EMLSAT00000006454 description:"maker-LSalAtl2s3535-snap-gene-0.8") HSP 1 Score: 63.5438 bits (153), Expect = 2.725e-11 Identity = 41/98 (41.84%), Postives = 47/98 (47.96%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGV----NANAPYYCSQNKS---------CSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKA 158 C+VC V HYGA AC CRAFFRR V N P C K C I+ R CQ CRF C+ GM S V+T+E K KKE + Sbjct: 28 CRVCRVVEYQFHHYGAYACNRCRAFFRRMVRRQRKGNPPTPCITTKGVPPITDAPICDISLF-RGACQACRFLACLNKGMDPSLVLTDE-KSLKKENS 123
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Match: EMLSAG00000005620 (supercontig:LSalAtl2s:LSalAtl2s301:514440:538934:1 gene:EMLSAG00000005620 transcript:EMLSAT00000005620 description:"maker-LSalAtl2s301-augustus-gene-5.4") HSP 1 Score: 59.3066 bits (142), Expect = 1.925e-10 Identity = 29/75 (38.67%), Postives = 41/75 (54.67%), Query Frame = 0 Query: 69 IRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGV---NANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGM 140 +R C+VC + A + H+GA C C++FF R N N+ C N SC I K R C+ CR +KC+ +GM Sbjct: 33 MRNQICRVCDEPAAGY-HFGAFTCEGCKSFFGRTCGKSNLNSISECKNNYSCVIDKKNRTSCKACRLRKCLRVGM 106
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Match: EMLSAG00000005619 (supercontig:LSalAtl2s:LSalAtl2s301:354064:356113:1 gene:EMLSAG00000005619 transcript:EMLSAT00000005619 description:"maker-LSalAtl2s301-augustus-gene-3.7") HSP 1 Score: 59.6918 bits (143), Expect = 9.678e-10 Identity = 26/71 (36.62%), Postives = 37/71 (52.11%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYY-CSQNKSCSITKHTRKHCQYCRFQKCMAIGMRAS 143 C+VC + A H+GA C C++FF R N + C N C + K R C+ CR +KC+ +GM S Sbjct: 57 CRVCEEPAAG-FHFGAFTCEGCKSFFGRTCNNQSVIQECKNNYRCVVDKKNRTACKACRLRKCIMVGMSKS 126
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Match: EMLSAG00000007741 (supercontig:LSalAtl2s:LSalAtl2s450:172104:174744:-1 gene:EMLSAG00000007741 transcript:EMLSAT00000007741 description:"maker-LSalAtl2s450-snap-gene-2.9") HSP 1 Score: 56.6102 bits (135), Expect = 1.095e-8 Identity = 29/88 (32.95%), Postives = 39/88 (44.32%), Query Frame = 0 Query: 72 VECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKS----CSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKK 155 + CKVC D ++ HYG +C C FF+R ++ Y C C I K R C+ CR +KC M V E R+ K Sbjct: 106 IPCKVCGDRSSGK-HYGIYSCDGCSGFFKRSIHRQRIYTCKAQGEFKGRCPIDKTHRNQCRACRLKKCFDCSMNKDAVQHERGPRKSK 192
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|2500907|sp|Q24143.1|HR96_DROME (RecName: Full=Nuclear hormone receptor HR96; Short=dHR96; AltName: Full=Nuclear receptor subfamily 1 group J member 1) HSP 1 Score: 97.0561 bits (240), Expect = 7.713e-20 Identity = 50/133 (37.59%), Postives = 75/133 (56.39%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEED---KREKKEKARIKRVTKDSGSQS-ESAMGSEMEHSRPGEHSLFGAMHFLAESHSE 202 C VC D A + ++ A+ C SC+AFFRR A + C N++C IT TR+ CQ CR +KC+ IGM++ +M+EED KR K E R KR ++G+ + ++ G E +H P + S H+ S+ Sbjct: 7 CAVCGDKALGY-NFNAVTCESCKAFFRRNALAKKQFTCPFNQNCDITVVTRRFCQKCRLRKCLDIGMKSENIMSEEDKLIKRRKIETNRAKRRLMENGTDACDADGGEERDHKAPADSSSSNLDHYSGSQDSQ 138
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|45645185|sp|Q17771.3|NHR35_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-35) HSP 1 Score: 96.2857 bits (238), Expect = 7.903e-20 Identity = 45/89 (50.56%), Postives = 54/89 (60.67%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEED---KREKKEKAR 159 C +CSDVA HYGAIAC C+ FFRR V N Y+C C I KH R C+YCRF KC++ GMR V +E D KREKK+ + Sbjct: 77 CHICSDVATGR-HYGAIACNGCKGFFRRTVRRNYEYHCRFESKCEIDKHNRAVCRYCRFMKCISSGMRDDQVQSERDVIGKREKKDNMK 164
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|44888978|sp|O02151.3|NHR14_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-14) HSP 1 Score: 92.8189 bits (229), Expect = 7.013e-19 Identity = 54/135 (40.00%), Postives = 68/135 (50.37%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEED-----KREKKEKARIKRVTKDSGSQSES--AMGSEMEHSRPGEHSLFGAMHFLAESHS 201 C VC D A HYGA+AC C+ FFRR V N Y C NK C+I K R C+YCRFQKC+A GM+ + E D KR K+ A + + G+ S MG+ + SR L H LA + S Sbjct: 20 CVVCGDKAIGK-HYGAVACNGCKGFFRRSVWQNLQYTCRFNKQCNIDKDHRNACRYCRFQKCLADGMKPEAIQNERDRIGSTKRRKRSGANSENNSDSEGTPSPKIEVMGNSV--SRKLIEMLLDIEHRLASNQS 151
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|52783388|sp|Q7SYN5.1|RXRBA_DANRE (RecName: Full=Retinoic acid receptor RXR-beta-A; AltName: Full=Nuclear receptor subfamily 2 group B member 2-A; AltName: Full=Retinoid X receptor beta-A) HSP 1 Score: 92.0485 bits (227), Expect = 1.488e-18 Identity = 43/114 (37.72%), Postives = 62/114 (54.39%), Query Frame = 0 Query: 66 PKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRVTKDSGSQSESAMGSEM 179 P +K C +C D ++ HYG +C C+ FF+R V + Y C NK C + K R CQYCR+QKC+A+GM+ V E + ++E+ R K +D +S SA EM Sbjct: 117 PMVSQKRLCAICGDRSSGK-HYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDKRQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEERQRNKE--RDGEVESSSAANEEM 227
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|114152848|sp|Q94407.3|NHR48_CAEEL (RecName: Full=Nuclear hormone receptor family member nhr-48) HSP 1 Score: 92.0485 bits (227), Expect = 3.042e-18 Identity = 56/179 (31.28%), Postives = 88/179 (49.16%), Query Frame = 0 Query: 56 ASQGKPKRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKA--RIKRVTKDSGSQS--ESAMGSEMEHS---RPGEHSLFGAMHFLAESHSEHHPHSNPLLAGGHEDSSSHSYSHEE 227 +S G +++ + KV C+VC D A + ++ I C SC+AFFRR N C N+ C I +R+ CQ CR KC A+GM+ W+M+EE + EKK++ +R +D+ +++ E+ M E E+S P +LA + H GH H Y+ +E Sbjct: 83 SSSGGNEKESKRTANKV-CRVCGDKAFSY-NFNVITCESCKAFFRRNANKEKEIRCPFNEQCEINMVSRRFCQRCRLTKCFAVGMKKEWIMSEEARLEKKQRVEENRERRLQDAMNRALEEACMEDESENSYDEAPAPSHQMSVRQYLANDDAPHKSSDEVQPHLGH-----HGYNQKE 254
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|68566021|sp|Q26622.1|SHR2_STRPU (RecName: Full=Orphan steroid hormone receptor 2; AltName: Full=SpSHR2) HSP 1 Score: 91.6633 bits (226), Expect = 3.598e-18 Identity = 41/99 (41.41%), Postives = 55/99 (55.56%), Query Frame = 0 Query: 59 GKPKRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEK 157 KP P+ I C VC D A+ HYGAI+C C+ FF+R + + Y C NK C I KH R CQYCR QKC+ +GM++ V E + ++K Sbjct: 74 AKPGMTSPRPIEL--CAVCGDKASGR-HYGAISCEGCKGFFKRSIRKHLGYTCRGNKDCQIIKHNRNRCQYCRLQKCLDMGMKSDSVQCERSPLKTRDK 169
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|1351190|sp|P49116.1|NR2C2_HUMAN (RecName: Full=Nuclear receptor subfamily 2 group C member 2; AltName: Full=Orphan nuclear receptor TAK1; AltName: Full=Orphan nuclear receptor TR4; AltName: Full=Testicular receptor 4) HSP 1 Score: 90.5077 bits (223), Expect = 7.147e-18 Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 0 Query: 59 GKPKRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTE----EDKREK 154 GK +RP+ + C VC D A+ HYGA++C C+ FF+R V N Y C N+ C I KH R CQ+CR +KC+ +GM+ V +E + +REK Sbjct: 104 GKTDVQRPQVVEY--CVVCGDKASGR-HYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCIINKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDVQREK 200
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|190411624|sp|Q1L673.2|VDRB_DANRE (RecName: Full=Vitamin D3 receptor B; Short=VDR-B; AltName: Full=1,25-dihydroxyvitamin D3 receptor B; AltName: Full=Nuclear receptor subfamily 1 group I member 1-B) HSP 1 Score: 88.9669 bits (219), Expect = 1.223e-17 Identity = 36/83 (43.37%), Postives = 52/83 (62.65%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKE 156 C VC D A H+ A+ C C+ FFRR + A + C N SC+ITK R+HCQ CR ++C+ IGM +++T+E+ + KKE Sbjct: 23 CGVCGDKATG-FHFNAMTCEGCKGFFRRSMKRKASFTCPFNGSCTITKDNRRHCQACRLKRCLDIGMMKEFILTDEEVQRKKE 104
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|1706576|sp|P49883.1|ECR_MANSE (RecName: Full=Ecdysone receptor; AltName: Full=20-hydroxy-ecdysone receptor; Short=20E receptor; AltName: Full=EcRH; AltName: Full=Ecdysteroid receptor; AltName: Full=Nuclear receptor subfamily 1 group H member 1) HSP 1 Score: 88.9669 bits (219), Expect = 2.007e-17 Identity = 51/140 (36.43%), Postives = 78/140 (55.71%), Query Frame = 0 Query: 51 SICGKASQGKPKRKR--PKFIRKVE-CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTE---EDKREKKEKARIKRVTKDSGSQSESAMGSEMEHSRP 184 SI G ++ G+P+R++ P ++ E C VC D A+ + HY A+ C C+ FFRR V NA Y C +C + + R+ CQ CR +KC+A+GMR V+ E ++KR +KE R K S + + M + M+ P Sbjct: 121 SINGCSTDGEPRRQKKGPAPRQQEELCLVCGDRASGY-HYNALTCEGCKGFFRRSVTKNAVYICKFGHACEMDMYMRRKCQECRLKKCLAVGMRPECVVPESTCKNKRREKEAQREKDKLPVSTTTVDDHMPAIMQCDPP 259
BLAST of vitamin d3 receptor b-like vs. SwissProt
Match: gi|133488|sp|P18514.1|RARA_NOTVI (RecName: Full=Retinoic acid receptor alpha; Short=RAR-alpha; AltName: Full=Nuclear receptor subfamily 1 group B member 1) HSP 1 Score: 88.1965 bits (217), Expect = 2.470e-17 Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKAR 159 C VC D ++ + HYG AC C+ FFRR + N Y C ++K+C I K TR CQYCR QKC +GM V + +K++K+E + Sbjct: 87 CFVCQDKSSGY-HYGVSACEGCKGFFRRSIQKNMVYTCHRDKTCIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKQEAPK 171
BLAST of vitamin d3 receptor b-like vs. nr
Match: gi|657600354|gb|AID52838.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 764.992 bits (1974), Expect = 0.000e+0 Identity = 411/587 (70.02%), Postives = 459/587 (78.19%), Query Frame = 0 Query: 1 MLAHGQFGYWKPKTEFSEDESNSPTGSLTESSLAAHMAGVLDSSANRGGHSICGKASQGKPKRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRVTK---DSGSQSESAMGSEM-EHSRPGEHSL--FGAM-HFLAESHSEHHPHSNPLLAGGHEDSSSHSYSHEEIPHTYGMTARHSVSSPTPSSSTYSDYTPLSQPSPFDCSTSSGGGTRSHVSGPFGLERCASG-GGESPSGDLEGYQSSTEYISPPSPLEHKPDISFFVEGTHI-KDQPILPFTSEEVFLVDNIMNTEIATTRSIPVNPEVLMVMIDAAKKGTAIPYPALVEGYTICMRRIIQFVSKLDFFQSFSLPDQRSLLLHNTDMIVNIRSARLLRPGINLQAQVNHATGGPSLEPACASMDLFKCQERLEYKQIFQSPWACDPHHEAQFASLMENLFHLEMDVTTTTLMSMIVLFSTSYTDLKDSARAVQNQEFFSQLLYRYLGSMIGRKNATQLLPKYMHMISQLEEMSQIMMTKRLTL 578 MLA GQFG+WK K++ S TG S+L + M G S GKPKRKRPKFIRKV CKVC DVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQ+KSC ITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDK+EKKEKAR+KRV+K DSGS SES + ++ EH P S +G+ HF ESH H PH + + HED +S E+ +Y +R S+ SPTPSS+ +S+Y S PFDCST GG + + G++RCASG GGESP D EGYQSS EY+SP SP+E KPDISFFV+ +I +DQPILPFTSEE FLV+NI+NTE+ATT+SIPVNPEVLM MI+AAK GT IPY ALVEGYT CMRRIIQFVSKLDFFQSF LPDQR LLLHNTDMIVN+RSARLLRPGINLQAQ+NHATGGPSLE SMDLF+C ERLEYKQIFQSPWACD HEAQFASLMENLFHLEMD TTTTLM+MIVLFSTSY +LKDS RAVQNQEFF+QLLYRYLGSMIGRKNA +LLPKYMH+ISQLEEMSQIM+ KRLT+ Sbjct: 2 MLADGQFGFWKSKSDLSH------TGCSPGSALTSMMTSNTSVPEQAMGKS-------GKPKRKRPKFIRKVVCKVCGDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQSKSCPITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKQEKKEKARLKRVSKVGKDSGSLSESGLVADYDEHGGPTVCSSPPYGSRNHFSPESH--HAPHQSQVYC--HED---QYHSSEDPQMSYCSGSRDSLHSPTPSSA-FSEYPAASHTPPFDCST---GGQNALL----GMDRCASGEGGESPINDAEGYQSSMEYVSPASPIEMKPDISFFVDTANIIRDQPILPFTSEETFLVENIINTEVATTQSIPVNPEVLMGMIEAAKNGTVIPYSALVEGYTTCMRRIIQFVSKLDFFQSFVLPDQRDLLLHNTDMIVNLRSARLLRPGINLQAQINHATGGPSLENTTTSMDLFQCPERLEYKQIFQSPWACDEKHEAQFASLMENLFHLEMDRTTTTLMAMIVLFSTSYAELKDSHRAVQNQEFFTQLLYRYLGSMIGRKNAIKLLPKYMHLISQLEEMSQIMIAKRLTI 560
BLAST of vitamin d3 receptor b-like vs. nr
Match: gi|657600364|gb|AID52843.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 169.088 bits (427), Expect = 1.447e-42 Identity = 90/245 (36.73%), Postives = 140/245 (57.14%), Query Frame = 0 Query: 334 LPFTSEEVFLVDNIMNTEIATTRSIPVNPEVLMVMIDAAKKGTAIPYPALVEGYTICMRRIIQFVSKLDFFQSFSLPDQRSLLLHNTDMIVNIRSARLLRPGINLQAQVNHATGGPSLEPACASMDLFKCQERLEYKQIFQSPWACDPHHEAQFASLMENLFHLEMDVTTTTLMSMIVLFSTSYTDLKDSARAVQNQEFFSQLLYRYLGSMIGRKNATQLLPKYMHMISQLEEMSQIMMTKRLTL 578 +P E+ FL D ++ E A R IP+ E L+ +++AK T IPY A V+G++ C++RI +F+S+LDFF S DQ+ LL NT M+VN++SAR+L+P +LQ Q+ G + AS + RL Y Q F SPW C E ++ LM+ LF+L+MD T+ LM ++ + + +L S + + +FSQLLY++L S+ G + K + +L EM+ I+ +RL L Sbjct: 239 IPTLDEKTFLEDLVLK-EAACRREIPIRQETLIKFMESAKHETIIPYDACVDGFSTCVQRISKFMSRLDFFSSLMWSDQQILLRCNTHMVVNLKSARMLKPTNSLQGQLCLTNGTQPNQAISASPN------RLTYSQFFNSPWCCSADKEEEYKKLMDELFNLDMDDVTSVLMMIMTMLAPPTEELIQSNQVSSRRSYFSQLLYKHLYSVKGEQLGRVSFQKCTQFLDKLREMAHILKQERLLL 476 HSP 2 Score: 153.295 bits (386), Expect = 6.729e-37 Identity = 74/150 (49.33%), Postives = 97/150 (64.67%), Query Frame = 0 Query: 26 GSLTESSLAAHMA-----GVLDSSANR--GGHSICGKASQGKPKRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRVTKDSG 168 GSLT SSL + G S A + G S + KP++ R ++IR V C VC D+ANDH+HYGAIACYSCRAFFRR V+ A Y CS+N C +TK TRKHCQ CRF+KC+ IGM+ SWVMTE+++++ + K K++ G Sbjct: 5 GSLTMSSLPSSQIIGNGIGGCSSQARKPGGKRSNLNASGTAKPRKPRKRYIRIVACSVCGDIANDHVHYGAIACYSCRAFFRRSVSNEAHYECSRNSKCPVTKETRKHCQSCRFKKCIDIGMKPSWVMTEDERKDNRAKILKKKMELRKG 154
BLAST of vitamin d3 receptor b-like vs. nr
Match: gi|1325279534|ref|XP_023324421.1| (uncharacterized protein LOC111698336, partial [Eurytemora affinis]) HSP 1 Score: 121.709 bits (304), Expect = 7.197e-26 Identity = 53/95 (55.79%), Postives = 67/95 (70.53%), Query Frame = 0 Query: 59 GKPK-RKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYY-CSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDK 151 GK K RKR + +C VC D+A +H+HYG IACYSCRAFFRR VN+ P CS +C+I K TRK CQ CRF KC A+GM++ WV++E+DK Sbjct: 10 GKTKVRKRYDIPKTAKCHVCGDLAAEHLHYGGIACYSCRAFFRRTVNSTRPMLDCSNGDNCTINKETRKRCQSCRFDKCKAVGMKSLWVLSEDDK 104
BLAST of vitamin d3 receptor b-like vs. nr
Match: gi|657600360|gb|AID52841.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 117.857 bits (294), Expect = 1.648e-24 Identity = 51/101 (50.50%), Postives = 69/101 (68.32%), Query Frame = 0 Query: 62 KRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKR 162 K+KR + + C VC D A +H HYG IAC+SCRAFFRR V Y CS + +C +T TRK+CQ CRF KC+ GM+ASWV+++E+K E+ EK R ++ Sbjct: 110 KKKRRSSPKHLSCHVCGDRAPNHCHYGGIACFSCRAFFRRSVPKYDTYTCSSSSNCVVTPATRKNCQKCRFDKCVEAGMKASWVLSDEEKLERLEKKRSRK 210 HSP 2 Score: 84.3445 bits (207), Expect = 1.825e-13 Identity = 62/225 (27.56%), Postives = 108/225 (48.00%), Query Frame = 0 Query: 351 EIATTRS-IPVNPEVLMVMIDAAKKGTAIPYPALVEGYTICMRRIIQFVSKLDFFQSFSLPDQRSLLLHNTDMIVNIRSARLLRPG--INLQAQVNHATGGPSLEPACASMDLFKCQERLEYKQIFQSPWACDPHHEAQFASLMENLFH-LEMDVTTTTLMSMIVLFSTSYTDLKDSARAVQNQEFFSQLLYRYLGSMIGRKNATQLLPKYMHMISQLEEMSQIM 571 ++ TTR+ + ++P++L ++ I +VE + RI++FV ++D F + S D+++LL N DM+ I+ A L P NL+AQ + TG S + + + +QIF PWA H+ F+S + L L D +TL ++ LF T +L + QE + LL++YL G++ A K M + L +++I+ Sbjct: 278 DLQTTRTTVEMSPQLLDQIVRLTHTHETIDTDTIVEFFKTVYCRIVKFVGEVDGFSTLSDTDKKTLLSKNMDMLSTIQLASSLHPNGQGNLEAQFLY-TGHYS------EISHLRGHHGIAMEQIFVEPWAKGDTHKKYFSSTIRQLAKLLREDTKVSTLFQLVALFHTENVELDNKGTIESVQEGMATLLHKYLKQRYGQQLANSTFSKLMASLFDLRCLAEIL 495
BLAST of vitamin d3 receptor b-like vs. nr
Match: gi|1325312032|ref|XP_023337648.1| (nuclear receptor ROR-gamma-like isoform X1 [Eurytemora affinis]) HSP 1 Score: 112.079 bits (279), Expect = 2.095e-22 Identity = 73/246 (29.67%), Postives = 125/246 (50.81%), Query Frame = 0 Query: 336 FTSEEVFLVDNIMNTEIATTRSIPVNP----EVLMVMIDAAKKGTAIPYPALVEGYTICMRRIIQFVSKLDFFQSFSLPDQRSLLLHNTDMIVNIRSARLLRPGINLQAQVNHATGGPSLEPACASMDLFKCQERLEYKQIFQSPWACDPHHEAQFASLMENLFHLEMDVTTTTLMSMIVLFSTSYTD-LKDSARAVQNQEFFSQLLYRYLGSMIGRKNATQLLPKYMHMISQLEEMSQIMMTKRL 576 F S++ +D ++N + +T +I P E L+ ++ +A G ++ Y ++ GYT +++I F L F S S+ DQ++LL N+D I NI+SA G + + + E + Q +E+ Q+F+SPWA + HE ++ +L+ + L + + LM +I LF+ L++ + + QE + LLYRYL G K A +L K+M M+ L EM+ IM + L Sbjct: 303 FNSDDQQRIDQLVNIDKSTQLTIEDIPKEILETLIKLMFSADGGKSLDYAVIIWGYTFAIQKITYFAKSLPEFVSCSIEDQKNLLYQNSDPIFNIKSAMFFNSGSDSFTDQMNKFCVFNFEKLSDKFNTVVMQP-IEWNQLFKSPWATNLEHEQKYVNLLNHAAELNLQHDSGCLMQVIALFAIDGEHYLENQEQISRIQESYVNLLYRYLVHKEGSKRAEELHAKFMQMLHYLREMADIMKHQTL 547 HSP 2 Score: 76.2554 bits (186), Expect = 7.750e-11 Identity = 35/85 (41.18%), Postives = 51/85 (60.00%), Query Frame = 0 Query: 60 KPKRKRPKFIRKVECKVCSDVANDHIH--YGAIACYSCRAFFRRGVNANAP--YYCSQNKSCSITKHTRKHCQYCRFQKCMAIGM 140 +P++K C VC D A + + YG +C+SCRAFFRR ++ +YC + +C + +TRK CQYCRF KC+A+GM Sbjct: 49 RPQKKETSLTS--SCTVCGDKATKYRYSNYGTTSCFSCRAFFRRTISKGNQELFYCGEG-NCEVNLNTRKKCQYCRFNKCIAVGM 130
BLAST of vitamin d3 receptor b-like vs. nr
Match: gi|1325258266|ref|XP_023325470.1| (uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258271|ref|XP_023325479.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258277|ref|XP_023325484.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258282|ref|XP_023325492.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258289|ref|XP_023325500.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258292|ref|XP_023325508.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258296|ref|XP_023325515.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258300|ref|XP_023325523.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258306|ref|XP_023325531.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258311|ref|XP_023325539.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258315|ref|XP_023325547.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258319|ref|XP_023325554.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258329|ref|XP_023325561.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258334|ref|XP_023325570.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258338|ref|XP_023325578.1| uncharacterized protein LOC111699122 [Eurytemora affinis] >gi|1325258342|ref|XP_023325585.1| uncharacterized protein LOC111699122 [Eurytemora affinis]) HSP 1 Score: 112.464 bits (280), Expect = 2.728e-22 Identity = 44/97 (45.36%), Postives = 71/97 (73.20%), Query Frame = 0 Query: 73 ECKVCSDVANDHIHYGAIACYSCRAFFRRGVN---ANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRVTKD 166 +CK+C++ A HIHYGA+ C+SCRAFFRR + AN+ Y C ++++C I TRK+CQ+CR+QKC+++GM+ +WV++EE+++ + K R + D Sbjct: 40 KCKICNEPAAKHIHYGAMTCFSCRAFFRRSIQNKTANS-YTCRRSQNCEINLRTRKNCQFCRYQKCLSVGMKTNWVLSEEERQRRFRKVRERHEAND 135 HSP 2 Score: 78.9518 bits (193), Expect = 1.092e-11 Identity = 84/338 (24.85%), Postives = 144/338 (42.60%), Query Frame = 0 Query: 239 SVSSPTPSSSTYSDYTPLSQPSPFDCSTSSGGGTRSHVSGPFGLERCASGGG--ESPSGDLEGYQSSTEYISPPSPLEHKPDISFFVEGTHIKDQPILPFTSEEVFLVDNIMNTEIATTRSIPVNPEVLMVMIDAAKKGTAIPYPALVEGYTICMRRIIQFVSKLDFFQSFSLPDQRSLLLHNTDMIVNIRSARLLRPGINLQAQVNHATGGP---SLEPACASMDLFKCQERLEYKQIFQSPWACDPH-HEAQFASLMENLFHLEMDVTTTTLMSMIVLFSTSYTDLKDSARAVQNQEFFSQLLYRYLGSMIGRKNATQLLPKYMHMISQLEEMSQI 570 SVS + S YS S S C S GG + V+G + +E G E S D EGY + + P QP + FT +E ++ N++ + RS+ E++ MI + + A + GY + + RI + + + F+ S DQ +LL N +++V++R A N QV + G ++E + + + ++YK F S A E ++ L E + + D T + L++ VLFS + L +S + Q + ++LYRY+ S R A L + +I+ + EM++I Sbjct: 360 SVSQAGSNPSLYSG----SNGSILACHNSQTGG-QPIVAGDY-VETVLEGLAPDEMNSDDEEGYVNMNGFYDP---------------------QPEIIFTPDEAEILKNVVESHNERYRSVNFGEELIKEMIFCSMFSIPVSTQAAITGYRLIVERITRIANHQEAFKQLSNEDQGALLKENANLLVSLRGAIFFDSQKNGAQQVMLSMGEDDIQTIENMFSKLLREDTMKHIDYK-TFNSIQAIGLSPKEDRYNYLQEKVGKVLNDETISILLTYTVLFSPDFCSLTNSREVYRTQSMYLKMLYRYIYSKHPRHAARLKLANVLDVITCIREMAEI 669
BLAST of vitamin d3 receptor b-like vs. nr
Match: gi|657600352|gb|AID52837.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 107.842 bits (268), Expect = 2.807e-21 Identity = 46/118 (38.98%), Postives = 74/118 (62.71%), Query Frame = 0 Query: 57 SQGKPKRKRPKFIRKVE----CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANAPYY--CSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRVTKDSG 168 S P K K +VE C+VC + A H+HYGAI C+SC+AFFRR + N + CS + C + +RKHCQ CR++ C+ +GM A+WV+++E++ ++ + R+ +V+ +SG Sbjct: 15 STSAPTTKSKKASSQVEFSEKCRVCKEPATRHLHYGAIVCFSCKAFFRRAIQNNVYKFFNCSVDGKCEMNSISRKHCQKCRWEACLKVGMNANWVLSKEERLDRLNRRRVSQVSPESG 132
BLAST of vitamin d3 receptor b-like vs. nr
Match: gi|1325306415|ref|XP_023334818.1| (oxysterols receptor LXR-alpha-like [Eurytemora affinis]) HSP 1 Score: 100.908 bits (250), Expect = 2.345e-20 Identity = 43/96 (44.79%), Postives = 61/96 (63.54%), Query Frame = 0 Query: 74 CKVCSDVANDHIHYGAIACYSCRAFFRRGVN--ANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRVTKDS 167 CKVC + A H +YG C SCRAFFRR VN AN Y+C +N +C + TRK CQYCR++ C GM+ SWV+T+ +K+ K + + + ++S Sbjct: 44 CKVCGEEAGRHSYYGGQVCASCRAFFRRSVNSGANKAYFCVKNGNCEVNSKTRKQCQYCRYRLCEDAGMKTSWVLTDTEKKLKSSEGKEGKQKRNS 139
BLAST of vitamin d3 receptor b-like vs. nr
Match: gi|657600356|gb|AID52839.1| (nuclear receptor [Tigriopus japonicus]) HSP 1 Score: 106.301 bits (264), Expect = 2.623e-20 Identity = 52/152 (34.21%), Postives = 83/152 (54.61%), Query Frame = 0 Query: 57 SQGKPKRKRPKFIRKVE-CKVCSDVANDHIHYGAIACYSCRAFFRRGVNANA--PYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRVTKDSGSQSESAMGSEMEHSRPGEHSLF-GAMHFLAESHSEHH 204 S GK +K I E C+VC + A H+HYG++ C+SCRAFFRR + A Y C + C I +RK+CQ CR+++C++ GM+ +WV++EE++ + K R K+ ++S +S E + + E G+ +HS H Sbjct: 70 SSGKKCKKENPLISDTEKCRVCGEPAARHVHYGSVTCFSCRAFFRRSIQNKAWNNYSCRRQGQCEIMLKSRKNCQKCRYEECLSAGMKPTWVLSEEERSRRFRKTREKKARQNSTRKSNEGSEPETNNGQGNEDDQIPGSSKLDTRTHSTLH 221
BLAST of vitamin d3 receptor b-like vs. nr
Match: gi|1061479157|gb|ODM96695.1| (Vitamin D3 receptor A [Orchesella cincta]) HSP 1 Score: 105.916 bits (263), Expect = 4.457e-20 Identity = 52/114 (45.61%), Postives = 69/114 (60.53%), Query Frame = 0 Query: 54 GKASQGKPKRKRPKFIRKVECKVCSDVANDHIHYGAIACYSCRAFFRRGV--NANAPYYCSQNKSCSITKHTRKHCQYCRFQKCMAIGMRASWVMTEEDKREKKEKARIKRVTK 165 GK K RKRPK C VC D A H+G ++C SC+AFFRR V +A+ + C+ + C I TRK CQ+CRF+KC+AIGM SWVMTEE++ ++ K+ TK Sbjct: 85 GKGFSRKRSRKRPK-----TCGVCGDRAKS-FHFGGLSCDSCKAFFRRSVQNDAHVAFRCAYDSCCDINISTRKSCQFCRFKKCLAIGMEKSWVMTEEERNALNQQRLEKKQTK 192 The following BLAST results are available for this feature:
BLAST of vitamin d3 receptor b-like vs. L. salmonis genes
Analysis Date: 2018-04-19 (T. kinsejongensis vs L. Salmonis peptides) Total hits: 25
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BLAST of vitamin d3 receptor b-like vs. SwissProt
Analysis Date: 2018-04-19 (T. kingejongensis peptided Blastp vs. SwissProt) Total hits: 25
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BLAST of vitamin d3 receptor b-like vs. nr
Analysis Date: 2018-05-15 (T. kingsejongensis proteins Blastp vs. NR) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Properties
Relationships
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene from alignment at scaffold2498_size15023:13040..14776+ Legend: mRNA Hold the cursor over a type above to highlight its positions in the sequence below.>snap_masked-scaffold2498_size15023-processed-gene-0.1 ID=snap_masked-scaffold2498_size15023-processed-gene-0.1|Name=vitamin d3 receptor b-like|organism=Tigriopus kingsejongensis|type=gene|length=1737bp|location=Sequence derived from alignment at scaffold2498_size15023:13040..14776+ (Tigriopus kingsejongensis)back to top Synonyms
The feature 'vitamin d3 receptor b-like' has the following synonyms
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